Evaluation of Succession in an Estuarine Macrobenthic Soft-Bottom Community near Tampa,Florida

A subtidal macrobenthic infaunal community was quantitatively sampled monthly from February 1975 to July 1978 (42 months). During that period, complete defaunation (presumably due to hypoxia) occurred three times at approximately annual intervals. The recovery of the community was examined for successional patterns by quantitative and qualitative normal and inverse classification analyses and by rank-order analysis of the dominant species. There was no consistent pattern of succession from recovery to recovery. Samples taken just after defaunation were not similar to each other and no consistent suites of species were detected. Classical succession in which suites of species are successively replaced by other suites until a persisting suite of species occurs (faciliation model) was not found. Other models of succession are discussed.     

Microbial Biogeography along an Estuarine Salinity Gradient: Combined Influences of Bacterial Growth and Residence Time

Shifts in bacterioplankton community composition along the salinity gradient of the Parker River estuary and Plum Island Sound, in northeastern Massachusetts, were related to residence time and bacterial community doubling time in spring, summer, and fall seasons. Bacterial community composition was characterized with denaturing gradient gel electrophoresis (DGGE) of PCR-amplified 16S ribosomal DNA. Average community doubling time was calculated from bacterial production ([¹⁴C]leucine incorporation) and bacterial abundance (direct counts). Freshwater and marine populations advected into the estuary represented a large fraction of the bacterioplankton community in all seasons. However, a unique estuarine community formed at intermediate salinities in summer and fall, when average doubling time was much shorter than water residence time, but not in spring, when doubling time was similar to residence time. Sequencing of DNA in DGGE bands demonstrated that most bands represented single phylotypes and that matching bands from different samples represented identical phylotypes. Most river and coastal ocean bacterioplankton were members of common freshwater and marine phylogenetic clusters within the phyla Proteobacteria, Bacteroidetes, and Actinobacteria. Estuarine bacterioplankton also belonged to these phyla but were related to clones and isolates from several different environments, including marine water columns, freshwater sediments, and soil.     

Macrobenthic community structure before, during, and after implementation of the Clean Water Act in the Neches River estuary (Texas)

Community structure of macrobenthos in the industrialized, tidal Neches River was studied 12 years after implementation of phase III of the Clean Water Act (CWA). Result were compared with a 1971–72 study conducted before implementation of the CWA and a 1984–85 study conducted after implementation of phases I & II of the CWA. The permitted BOD waste load decreased 93% between the 1971–72 and 1984–85 studies, then increased 19% between 1984–85 and the current study. A total of 50 taxa were collected during the 1971–72 study, 104 during the 1984–85 study, and 110 during the current study. Numbers of taxa per collection at each station increased by a factor of at least two between the 1971–72 and 1984–85 studies and were significantly different at the 0.0001 level. Numbers of taxa per collection at each station were not significantly different between the 1984–85 and the current study (p=0.286). Minimum collection densities in 1984–85 were higher than maximum densities in 1971–72 and were significantly different at the 0.0001 level. Collection densities were not significantly different between the 1984–85 study and the current study (p=0.374). Shannon's annual and station collection diversity values significantly increased (p=<0.05) between the 1971–72 and 1984–85 studies, but not between the 1984–85 and the current study (p=>0.05). Dendrograms of Sorenson's similarity index between all pairs of stations were more alike between the 1971–72 and the current study than between the 1984–85 and the current study. Evidence of some organic enrichment at the upper stations was indicated by the dominance of Limnodrilus hoffmeisteri and depressed oxygen concentrations. Environmental quality in the river has greatly improved since implementation of the CWA in 1972. Most of the improvments were due to phases I & II of the CWA, with little apparent change since implementation of phase III.     

Macrobenthic community structure before and after pollution abatement in the Neches River estuary (Texas)

Macrobenthos and physicochemical conditions in the lower 39 km of the Neches River estuary were studied from August, 1984 to May, 1985. The results were compared with data collected in 1971–1972. Between 1972 and 1984 the permitted BOD waste load in the tidal Neches River was reduced from 123 125 kg d to 8717 kg d. River discharge and dissolved oxygen concentrations were consistently higher and salinity was lower, during the same seasons, during the 1984–1985 study. A total of 50 taxa of macrobenthos were collected in 1971–1972 and 104 taxa were collected in 1984–1985. The numbers of taxa per collection at each station in 1984–1985 were at least twice those found in 1971–1972. Minimum densities in 1984–1985 were much higher than the maximum densities in 1971–1972 at all stations. Patterns of dominance, Sorenson's similarity index, and diversity ( ) values indicated improved water quality in 1984–1985. Statistical analysis of macrobenthic diversity indicated significant differences between upper estuary and lower estuary stations in 1971–1972. No significant differences were found in 1984–1985. Significant differences in numbers of taxa, macrobenthos densities, and values between the two studies were found. Reductions of waste loads, increased river discharge, and deepening of the navigation channel were among the factors that probably contributed most to the changes in community structure of the macrobenthos observed.     

Macrobenthic invertebrate richness and composition along a latitudinal gradient of European glacier-fed streams

1. The influence of 11 environmental variables on benthic macroinvertebrate communities was examined in seven glacier-fed European streams ranging from Svalbard in the north to the Pyrenees in the south. Between 4 and 11 near-pristine reaches were studied on each stream in 1996–97.
2. Taxonomic richness, measured at the family or subfamily (for Chironomidae) levels for insects and higher levels for non-insects, increased with latitude from Svalbard (3 taxa) to the Pyrenees (29 taxa).
3. A Generalized Additive Model (GAM) incorporating channel stability [Pfankuch Index (PFAN)], tractive force, Froude number (FROU), water conductivity (COND), suspended solids (SUSP) concentration, and maximum temperature explained 79% of the total deviance of the taxonomic richness per reach. Water temperature and the PFAN of stability made the highest contribution to this deviance. In the model, richness response to temperature was positive linear, whereas the response to the PFAN was bell-shaped with an optimum at an intermediate level of stability.
4. Generalized Additive Models calculated for the 16 most frequent taxa explained between 25 (Tipulidae) and 79% (Heptageniidae) of the deviance. In 10 models, more than 50% of the deviance was explained and 11 models had cross-validation correlation ratios above 0.5. Maximum temperature, the PFAN, SUSP and tractive force (TRAC) were the most frequently incorporated explanatory variables. Season and substrate characteristics were very rarely incorporated.
5. Our results highlight the strong deterministic nature of zoobenthic communities in glacier-fed streams and the prominent role of water temperature and substrate stability in determining longitudinal patterns of macroinvertebrate community structure. The GAMs are proposed as a tool for predicting changes of zoobenthic communities in glacier-fed streams under climate or hydrological change scenarios.     

Richness and Diversity of Bacterioplankton Species along an Estuarine Gradient in Moreton Bay, Australia

Bacterioplankton community diversity was investigated in the subtropical Brisbane River-Moreton Bay estuary, Australia (27°25′S, 153°5′E). Bacterial communities were studied using automated rRNA intergenic spacer analysis (ARISA), which amplifies 16S-23S ribosomal DNA internally transcribed spacer regions from mixed-community DNA and detects the separated products on a fragment analyzer. Samples were collected from eight sites throughout the estuary and east to the East Australian Current (Coral Sea). Bacterioplankton communities had the highest operational taxonomic unit (OTU) richness, as measured by ARISA at eastern bay stations (S [total richness] = 84 to 85 OTU) and the lowest richness in the Coral Sea (S = 39 to 59 OTU). Richness correlated positively with bacterial abundance; however, there were no strong correlations between diversity and salinity, NO₃⁻ and PO₄³⁻ concentrations, or chlorophyll a concentration. Bacterioplankton communities at the riverine stations were different from communities in the bay or Coral Sea. The main differences in OTU richness between stations were in taxa that each represented 0.1% (the detection limit) to 0.5% of the total amplified DNA, i.e., the “tail” of the distribution. We found that some bacterioplankton taxa are specific to distinct environments while others have a ubiquitous distribution from river to sea. Bacterioplankton richness and diversity patterns in the estuary are potentially a consequence of greater niche availability, mixing of local and adjacent environment communities, or intermediate disturbance. Furthermore, these results contrast with previous reports of spatially homogeneous bacterioplankton communities in other coastal waters.     

Biodegradation of Dichloromethane in an Estuarine Environment

Dichloromethane (DCM) is a toxic pollutant showing prolonged persistence in water. So far, biodegradation of DCM has only been reported in soils and freshwater systems. Herein, we studied whether or not biodegradation of DCM could occur in estuarine waters. Results showed over 90% mineralization of DCM in natural estuarine waters supplemented with DCM. Biodegradation of DCM in estuarine waters occurred by association of different bacterial species. Generally, two bacterial species participated in DCM degradation. Two bacterial consortia were obtained. Consortia were able to degrade around 80% of DCM in about 6 days. The species involved in the process were identified by 16S rRNA gene sequencing; a consortium was constituted by Pseudomonas sp. and Brevundimonas sp. and a second consortium was formed by Pseudomonas sp. and an Acinetobacter sp. Our results showed that DCM can be readily biodegraded in estuarine waters.     

Sediment Composition Influences Spatial Variation in the Abundance of Human Pathogen Indicator Bacteria within an Estuarine Environment

Faecal contamination of estuarine and coastal waters can pose a risk to human health, particularly in areas used for shellfish production or recreation. Routine microbiological water quality testing highlights areas of faecal indicator bacteria (FIB) contamination within the water column, but fails to consider the abundance of FIB in sediments, which under certain hydrodynamic conditions can become resuspended. Sediments can enhance the survival of FIB in estuarine environments, but the influence of sediment composition on the ecology and abundance of FIB is poorly understood. To determine the relationship between sediment composition (grain size and organic matter) and the abundance of pathogen indicator bacteria (PIB), sediments were collected from four transverse transects of the Conwy estuary, UK. The abundance of culturable Escherichia coli, total coliforms, enterococci, Campylobacter, Salmonella and Vibrio spp. in sediments was determined in relation to sediment grain size, organic matter content, salinity, depth and temperature. Sediments that contained higher proportions of silt and/or clay and associated organic matter content showed significant positive correlations with the abundance of PIB. Furthermore, the abundance of each bacterial group was positively correlated with the presence of all other groups enumerated. Campylobacter spp. were not isolated from estuarine sediments. Comparisons of the number of culturable E. coli, total coliforms and Vibrio spp. in sediments and the water column revealed that their abundance was 281, 433 and 58-fold greater in sediments (colony forming units (CFU)/100g) when compared with the water column (CFU/100ml), respectively. These data provide important insights into sediment compositions that promote the abundance of PIB in estuarine environments, with important implications for the modelling and prediction of public health risk based on sediment resuspension and transport.     

Patterns of Fine Root Mass and Distribution along a Disturbance Gradient in a Tropical Montane Forest, Central Sulawesi (Indonesia)

Large parts of the remaining tropical moist forests of South-east Asia are encroached at their margins by selective logging, rattan harvesting and the establishment of small agroforest plantations under the rainforest canopy. These slight to heavy disturbances affect aboveground forest structure by reducing wood biomass and canopy cover; however, they may also have a profound impact on the belowground compartment. In a lower montane moist forest of Central Sulawesi, we studied the profile totals of fine root biomass (FRB_tot, roots <2 mm until 50 cm of soil depth) and of fine root necromass (FRN_tot), the vertical distribution of fine root mass, and the fine root live/dead ratio by root coring in 12 forest stands that represented a gradient in forest use (or disturbance) intensity (forest use type A: undisturbed natural forest, B and C: slightly or moderately disturbed forests with selective timber extraction, D: heavily disturbed cacao agroforest systems under a remaining rainforest cover; each forest types being replicated three times). FRB_tot decreased significantly from forest A to the disturbed B, C and D forests, and reached less than 60% of the FRB_tot value of A in the agroforest systems D. A similar decrease with increasing disturbance intensity was found for FRN_tot. Forest disturbance intensity had no significant influence on the vertical distribution of fine root biomass in the profiles. According to correlation and principal components analyses, fractional canopy cover was the most important factor influencing FRB_tot and FRN_tot, whereas diameter at breast height, stand basal area, stem density, soil pH and base saturation had only a minor or no influence on root mass. A reduction in canopy cover from 90% (forest type A) to 75% (types C and D) was associated with a reduction in FRB_tot by about 45% which indicates that timber extraction leads not only to canopy gaps but to corresponding ‘root gaps’ in the soil as well. We conclude that forest encroachment that is widespread in large parts of South-east Asia’s remaining rainforests significantly reduces tree fine root biomass and associated carbon sequestration, even if it is conducted at moderate intensities only.     

Vertical Distribution of Denitrification in an Estuarine Sediment: Integrating Sediment Flowthrough Reactor Experiments and Microprofiling via Reactive Transport Modeling

Denitrifying activity in a sediment from the freshwater part of a polluted estuary in northwest Europe was quantified using two independent approaches. High-resolution N₂O microprofiles were recorded in sediment cores to which acetylene was added to the overlying water and injected laterally into the sediment. The vertical distribution of the rate of denitrification supported by nitrate uptake from the overlying water was then derived from the time series N₂O concentration profiles. The rates obtained for the core incubations were compared to the rates predicted by a forward reactive transport model, which included rate expression for denitrification calibrated with potential rate measurements obtained in flowthrough reactors containing undisturbed, 1-cm-thick sediment slices. The two approaches yielded comparable rate profiles, with a near-surface, 2- to 3-mm narrow zone of denitrification and maximum in situ rates on the order of 200 to 300 nmol cm⁻³ h⁻¹. The maximum in situ rates were about twofold lower than the maximum potential rate for the 0- to 1-cm depth interval of the sediment, indicating that in situ denitrification was nitrate limited. The experimentally and model-derived rates of denitrification implied that there was nitrate uptake by the sediment at a rate that was on the order of 50 (± 10) nmol cm⁻² h⁻¹, which agreed well with direct nitrate flux measurements for core incubations. Reactive transport model calculations showed that benthic uptake of nitrate at the site is particularly sensitive to the nitrate concentration in the overlying water and the maximum potential rate of denitrification in the sediment.     

Macrobenthic Communities of the Lower Chesapeake Bay. III. Southern Branch of the Elizabeth River

Macrobenthic invertebrates of an industrialized seaport ecosystem were studied seasonally from October, 1977 through July, 1978. Five stations were selected along the Southern Branch of the Elizabeth River, Virginia. The benthic community was dominated by eurytopic species that were not affected by minor to moderate stresses induced by man's activities in the seaport. Caution is required when benthic communities of the lower polyhaline to mesohaline zones of an estuary are used to indicate the effects of anthropomorphic alterations.     

Spatial Subtidal Macrobenthic Distribution in Relation to Abiotic Conditions in the Lima Estuary, NW of Portugal

During the summer of 2002, sampling was carried out in the Lima estuary in order to compare the pattern of the macrobenthic community’s distribution in relation to physical and chemical variables. A total of 54 macrobenthic taxa were identified. Abundance, biomass and specific diversity varied among the twenty stations. Abundance ranged from 212 to 9856 ind./m², with an average of 1581 ind./m². Abra alba presented the highest density corresponding to 39.1% of the total specimens gathered, followed by Hediste diversicolor with 31.5%. Biomass ranged from 0.12 to 264.62 g AFDW/m², with an average of 17.58 g AFDW/m². Cerastoderma edule and A. alba were the species with a clear predominance in the total biomass, contributing 75.3 and 13.8%, respectively. The multivariate techniques used revealed a macrobenthic community with five distinct groups, particularly related to the sedimentological characteristics and salinity. These results demonstrated significant differences in macrobenthic assemblage’s composition along an estuarine gradient. For the first time the presence of the nonindigenous invasive species Corbicula fluminea was described in this estuary.     

Seasonality and Structure of a Macrobenthic Seagrass Community on the Florida Gulf Coast

Macrofauna at two intertidal sites, quantitatively sampled monthly for 25 months, exhibited distinct reoccurring population fluctuations which were poorly correlated with abiotic parameters. Faunal dominants, Laeonereis culveri and Onuphis simoni, showed reciprocal fluctuations. Laeonereis exhibited non-synchronized reproduction and recruitment while Onuphis exhibited synchronized release. Laeonereis peaked before Onuphis while Oniphis fluctuated with the majority of other species. The faunal dominants exhibited one cycle in autumn at both sites but also exhibited a cycle at only one site in spring. Temperature is thus not indicated as causal and detrital input was suggested as the overriding factor. A hypothesis was advanced that Laeonereis is an opportunistic species exploiting fresh detritus, while Onuphis is a detritus feeder utilizing bacterial populations.     

Macrobenthic Communities of the Lower Chesapeake Bay. II. Lynn-haven Roads,Lynnhaven Bay,Broad Bay,and Linkhorn Bay

Based on 96 grab samples at 16 sites the composition and distribution of macrobenthic fauna were examined in a small coastal basin of lower Chesapeake Bay. Normal classification analysis of dominant species produced five site groups. Site groups were divided into clean sand sites, fine sand sites with varying amounts of silt-clay, and mud sites. Dominant species of the clean group were primarily restricted to this sediment type, while the dominant species of the other groups were widespread in the study area.     

Abundance and Diversity of Sulfur-Oxidizing Bacteria along a Salinity Gradient in Four Qinghai-Tibetan Lakes,China

Sulfur-oxidizing bacteria (SOB) play important roles in the sulfur cycle and are widespread in a number of environments, but their occurrence and relationship to geochemical conditions in (hyper)saline lakes are still poorly understood. In this study, the abundance and diversity of SOB populations were investigated in four Qinghai-Tibetan lakes (Erhai Lake, Gahai Lake 1, Gahai Lake 2 and Xiaochaidan Lake) by using quantitative polymerase chain reaction (qPCR) and soxB gene- (encoding sulfate thiohydrolase) based phylogenectic analyses. qPCR analyses showed that in the studied lakes, the total bacterial 16S rRNA and soxB gene abundances in the sediments were distinctly higher than in the overlying waters. The 16S rRNA gene abundance in the waters ranged 5.27 × 10⁶–6.09 × 10⁸ copies per mL and 7.39 × 10¹⁰–2.9 × 10¹¹ copies per gram sediment. The soxB gene abundance in the waters ranged from 1.88 × 10⁴ to 5.21 × 10⁵ per mL and 4.73 × 10⁶–2.65 × 10⁷ copies per gram sediment. The soxB gene in the waters of the two hypersaline lakes (Gahai Lake 2 and Xiaochaidan Lake) was more abundant (2.97 × 10⁵ and 5.21 × 10⁵ copies per mL) than that in the two low-salinity lakes (1.88 × 10⁴ and 3.36 × 10⁴ copies per mL). Phylogenetic analysis showed that Alpha- and Betaproteobacteria were dominant SOB in the investigated lakes, and the composition of proteobacterial subgroups varied with salinity: in freshwater Erhai Lake and low-salinity Gahai Lake 1, the SOB populations were dominated by the Betaproteobacteria, whereas in hypersaline Lake Gahai 2 and Xiaochaidan Lake, the SOB populations were dominated by Alphaproteobacteria. Overall, salinity played a key role in controlling the diversity and distribution of SOB populations in the investigated Qinghai-Tibetan lakes.     

盐城自然保护区射阳河口潮间带大型底栖动物空间分布与季节变化

2008年11月—2009年10月,在盐城自然保护区射阳河口潮间带按月份对大型底栖动物群落进行取样。共得到大型底栖动物16种,隶属3门4纲15科,为软体动物、节肢动物甲壳类和环节动物多毛类,其中,潮间带米草丛6种,高潮带光滩7种,中潮带光滩13种,低潮带光滩7种。对潮间带各样点的物种数、密度、生物量以及不同样点的生物多样性指数Margalef指数(S)、Shannon指数(H)、Pielou指数(J)和Simpson指数(D)进行样点-季节间无重复双因素方差分析,发现样点间物种数、密度和生物量差异极显著(所有P<0.01),三者季节间差异均不显著;样点间H、D和S差异显著(所有P<0.05),季节间差异均不显著;而季节间和样点间J差异均不显著。对四季4个样点的群落进行聚类和排序分析发现,中、高潮带光滩界限不明显,潮间带米草丛和低潮带光滩界限明显。结果表明:生境条件的不同是潮间带大型底栖动物群落组成差异的主要原因,同一生境大型底栖动物群落季节间差异不显著。     

Intratidal fluctuations in stratification within a mangrove estuary

The dependence of salinity stratification on the vertical structure of the longitudinal salinity gradient is investigated by solving the equations of longitudinal momentum and salt conservation. The results are used to interpret measurements made throughout 31 tidal cycles in the Merbok Estuary, Malaysia, as part of an ecological study of a tropical mangrove estuary. The solutions show that a substantial part of the salinity stratification was caused by vertical shear in the currents coupled with advection of the longitudinal salinity gradient. This mechanism led to maximum stratification around low water and minimum stratification around high water. Observed intratidal variations in stratification at neap tides greatly exceeded modelled values when a depth-independent, longitudinal salinity gradient was assumed. Simulations made using a longitudinal salinity gradient of simple depth-dependent, power-law form implied that this difference arose mainly because the near-surface, longitudinal salinity gradient in the field was significantly larger than that near the bed during neap tides and at times of high run-off. The longitudinal, dispersive transport of salt, fresh water and solutes due to vertical shear is shown to be important during periods of stratification at neap tides and during high run-off. The relevance of stratification to mangrove estuaries is discussed.