Strains of the soil fungus Mortierella show different degradation potentials for the phenylurea herbicide diuron

Microbial pesticide degradation studies have until now mainly focused on bacteria, although fungi have also been shown to degrade pesticides. In this study we clarify the background for the ability of the common soil fungus Mortierella to degrade the phenylurea herbicide diuron. Diuron degradation potentials of five Mortierella strains were compared, and the role of carbon and nitrogen for the degradation process was investigated. Results showed that the ability to degrade diuron varied greatly among the Mortierella strains tested, and the strains able to degrade diuron were closely related. Degradation of diuron was fastest in carbon and nitrogen rich media while suboptimal nutrient levels restricted degradation, making it unlikely that Mortierella utilize diuron as carbon or nitrogen sources. Degradation kinetics showed that diuron degradation was followed by formation of the metabolites 1-(3,4-dichlorophenyl)-3-methylurea, 1-(3,4-dichlorophenyl)urea and an hitherto unknown metabolite suggested to be 1-(3,4-dichlorophenyl)-3-methylideneurea.     

Detoxication of the herbicide diuron byPseudomonas sp.

A strain of bacteria able to detoxicate the herbicide diuron in pure culture was isolated from sites contaminated with different urea herbicides. Diuron was used as a sole source of carbon and energy by this isolate which is a Gram-negative, aerobic, rod-shaped bacterium with a single polar flagellum, and grows at 40 degrees C. The strain has been identified as Pseudomonas sp.     

Biotransformation and biomonitoring of phenylurea herbicide diuron

A Gram-positive, Micrococcus sp. strain PS-1 isolated from diuron storage site was studied for its capability of biotransformation of phenylurea herbicide diuron to a secondary metabolite, 1-(3,4-dichlorophenyl)urea (DCPU) for bioconjugation and antibody development applications. The metabolite formed associated with profound changes in bacterial cell morphology demonstrated increase in the degradation kinetics of diuron in presence of small quantity of a surfactant. The synthesized metabolite identified by chromatographic and mass spectrometry techniques was conjugated with carrier protein, and used as an immunogen for antibodies production. The generated antibody was highly specific, demonstrating excellent sensitivity against diuron. The antibody was used as receptor molecules in standard fluorescence immunoassay (FIA) format showing detection limit of 0.01 ng/mL in the optimum working concentration range of diuron with good signal precision (～2%). The study presented first time the degradation pathway of herbicide by specific microorganism to synthesize hapten for bioconjugation and immunoassay development.     

A novel disposable electrochemical immunosensor for phenyl urea herbicide diuron

A disposable electrochemical immunosensor has been developed for the determination of phenyl urea herbicide-diuron using a low cost laser ablated gold electrodes (LC-LAGE) fabricated on polystyrene substrate. The electrodes were electrochemically deposited with prussian blue-gold nanoparticle (PB-GNP) film, and a competitive inhibition immunoassay was performed on LC-LAGE by using a specific hapten-protein conjugate. The binding of available diuron specific antibody on conjugate coated electrode was detected using alkaline phosphatase rabbit anti-IgG antibody. The addition of 1-naphthyl phosphate substrate resulted in the production of electrochemically active product, 1-naphthol, which was monitored using square wave voltammetry technique. The assay exhibited an excellent sensitivity and specificity showing the dynamic response range between 1 ppt and 10 ppm for diuron with detection limit around 1 ppt. This study provides insight into development of a rapid and high-throughput screening of pesticides in environmental samples at a very low cost.     

Biodegradation of the herbicide diuron by streptomycetes isolated from soil

The diuron degrading activity of 17 streptomycete strains, obtained from agricultural and non-agricultural soils, was determined in the laboratory. All strains were identified as Streptomyces sp. by phenotypic characteristics and PCR-based assays. The strains were cultivated in liquid medium with diuron (4 mg L⁻¹) at 25 °C for 15 days. Biodegradation activity was determined by high-performance liquid chromatography. The results indicated that all strains were able to degrade diuron, but to different amounts. Twelve strains degraded the herbicide by up to 50% and four of them by up to 70%. Strain A7-9, belonging to S. albidoflavus cluster, was the most efficient organism in the degradation of diuron, achieving 95% degradation after five days of incubation and no herbicide remained after 10 days. Overall, the strains isolated from agricultural soils exhibited higher degradation percentages and rates than those isolated from non-agricultural soils. Given the high degradation activity observed here, the streptomycete strains show a good potential for bioremediation of soils contaminated with diuron.     

Biodegradation of the herbicide diuron by streptomycetes isolated from soil

The diuron degrading activity of 17 streptomycete strains, obtained from agricultural and non-agricultural soils, was determined in the laboratory. All strains were identified as Streptomyces sp. by phenotypic characteristics and PCR-based assays. The strains were cultivated in liquid medium with diuron (4 mg L⁻¹) at 25 °C for 15 days. Biodegradation activity was determined by high-performance liquid chromatography. The results indicated that all strains were able to degrade diuron, but to different amounts. Twelve strains degraded the herbicide by up to 50% and four of them by up to 70%. Strain A7-9, belonging to S. albidoflavus cluster, was the most efficient organism in the degradation of diuron, achieving 95% degradation after five days of incubation and no herbicide remained after 10 days. Overall, the strains isolated from agricultural soils exhibited higher degradation percentages and rates than those isolated from non-agricultural soils. Given the high degradation activity observed here, the streptomycete strains show a good potential for bioremediation of soils contaminated with diuron.     

Microbiological degradation of the herbicide dicamba

Summary Pseudomonas paucimobilis was isolated from a consortium which was capable of degrading dicamba (3,6-dichloro-2-methoxybenzoic acid) as the sole source of carbon. The degradation of dicamba byP. paucimobilis and the consortium was examined over a range of substrate concentration, temperature, and pH. In the concentration range of 100–2000 mg dicamba L^–1 (0.5–9.0 mM), the degradation was accompanied by a stoichiometric release of 2 mol of Cl^– per mol of dicamba degraded. The cultures had an optimum pH 6.5–7.0 for dicamba degradation. Growth studies at 10°C, 20°C, and 30°C yielded activation energy values in the range of 19–36 kcal mol^–1 and an average Q₁₀ value of 4.0. Compared with the pure cultureP. paucimobilis, the consortium was more active at the lower temperature.     

Stereospecific degradation of the phenoxypropionate herbicide dichlorprop

2,4-Dichlorophenoxyacetic acid (2,4-D)/α-ketoglutarate (α-KG) dioxygenase, TfdA, from Ralstonia eutropha JMP134, was purified from recombinant cells and shown by gas chromatographic and colorimetric methods to degrade only the S enantiomer of dichlorprop, a phenoxypropionate herbicide. Similarly, cell extracts of Burkholderia cepacia RASC, containing a biochemically and genetically related α-KG-dependent dioxygenase, also were shown to oxidize (S)-dichlorprop using chiral HPLC and colorimetric methods. In contrast, cell extracts of a mecoprop-degrading strain of Alcaligenes denitrificans were shown to catabolize (R)-dichlorprop. Although the A. denitrificans activity exhibited stereospecificity opposite to that of the JMP134 and RASC strains, its cofactor requirements were found to be characteristic of an α-KG-dependent dioxygenase. A PCR amplification product from the DNA of this strain was shown to encode an amino acid sequence that was 95% and 86% identical to the corresponding region of TfdA in RASC and JMP134, respectively. Thus, closely related herbicide-degrading gene products appear to be capable of exhibiting opposite stereochemical degradative capabilities.     

Laccase-mediated oxidative degradation of the herbicide dymron

The present study reports the successful and effective degradation of the persistent herbicide dymron catalyzed by the oxidative enzyme laccase in the presence of a reaction mediator (a laccase/mediator system). Using 2'-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) as the mediator, over 90% of dymron was degraded within 24 h, while the half-life of dymron is 50 days in soil. The results suggested that oxidation of dymron resulted in the production of decomposed compounds with a single aromatic ring. We also found that edible surfactants and a dishwashing detergent were useful to solubilize dymron in an aqueous solution and did not inhibit the oxidative degradation. Degradation proceeded at acidic pH and in a broad range of temperatures (303-353 K). The use of natural mediators also allowed the oxidative degradation of dymron to some extent. In conclusion, we propose the possible use of a laccase/mediator system for the treatment of soils and drainwater contaminated with herbicides.     

Biochemical and photochemical degradation of the herbicide lontrel

Degradation of Lontrel by activated sludge (AS) of purification works and UV irradiation was studied. 3,6-Dichloropicolinic acid (3,6-DCPA, the main active principle of Lontrel) was not degraded by the microbial association of the AS. AS treated with nitrosourea under various conditions did not oxidize Lontrel either. Hard UV radiation degraded 3,6-DCPA within 4-24 h at constant sparging (bubbling) of air, oxygen, or ozone. The rate of oxidation with oxygen or ozone bubbling was three to four times higher than with air bubbling. It was found that the products of photochemical degradation of Lontrel were also toxic; however, they were readily degraded by AS microorganisms without additional AS treatment.     

Biochemical and photochemical degradation of the herbicide Lontrel

Degradation of Lontrel by activated sludge (AS) from treatment plants and UV irradiation was studied. 3,6-Dichloropicolinic acid (3,6-DCPA, the main active principle of Lontrel) was not degraded by the microbial association of the AS. AS treated with nitrosourea under various conditions did not oxidize Lontrel either. Hard UV radiation degraded 3,6-DCPA within 4–24 h in the presence of constant sparging (bubbling) of air, oxygen, or ozone. The rate of oxidation in the presence of oxygen or ozone bubbling was three to four times higher than in the presence of air bubbling. It was found that the products of photochemical degradation of Lontrel were also toxic; however, they were readily degraded by AS microorganisms without additional AS treatment.     

Bacterial degradation of the herbicide bromoxynil byAgrobacterium radiobacter in biofilm

The bromoxynil-degrading soil microorganism Agrobacterium radiobacter was used for degradation of the herbicide under nonsterile batch and continuous conditions. From four types of carrier particles, beech shavings showed the best stability of the bacterial biofilm, bromoxynil concentration in a column reactor decreasing to 65% after 5 d. The efficacy of degradation was enhanced by addition of ferrous, cobaltous or cupric ions.     

Mobilization of genes for simazine degradation by the pSa plasmid

The plasmid pSa was found to mobilize the genes for simazine degradation (smz) of the rhizosphere bacterium Herbaspirillum sp. B601 by forming hybrid pSa-Smz plasmids. The independent migration of smz genes into various loci of genomes during the transfer and elimination of the hybrid plasmids indicated that the genes are parts of a catabolic island, which could be unstable under certain conditions.     

Enantioselective separation and degradation of the herbicide dichlorprop methyl in sediment

Chiral pesticides currently constitute about 50% of all pesticides dosage used in China, and this ratio is increasing as more complex structures are introduced. Dichlorprop methyl (DCPPM) is a chiral herbicide consisting of a pair of enantiomers. In this study, the enantiomeric separation of DCPPM was investigated by gas chromatography (GC) and high-performance liquid chromatography (HPLC) using chiral stationary phases (CSPs), and its enantiomeric degradation was characterized using a DCPPM-degrading bacterial strain isolated from an activated sludge from a textile-printing wastewater treatment plant. Baseline separation by both GC and HPLC was achieved. Incubation with DCPPM-degrading bacteria in different pH solutions showed that the R enantiomer was preferentially degraded over the S enantiomer of DCPPM. The degradation rate constant decreased with increasing pH in the order of k(pH5) approximately k(pH7) >k(pH9). In comparison, the enantioselectivity as indicated by EF followed the order of pH 7 > pH 9-pH 5.     

Novel pseudomonas plasmid involved in aniline degradation

Growth of the four methanogens investigated was inhibited by chloramphenicol-3-acetate; therefore, introduction of chloramphenicol acetyltransferase-encoding genes should not confer chloramphenicol resistance on these methanogens. Reduction of the aryl nitro group of chloramphenicol produced a compound which did not inhibit the growth of these methanogens.