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1.
Genetic modification of plants may result in unintended effects causing potentially adverse effects on the environment. A comparative safety assessment is therefore required by authorities, such as the European Food Safety Authority, in which the genetically modified plant is compared with its conventional counterpart. Part of the environmental risk assessment is a comparative field experiment in which the effect on non‐target organisms is compared. Statistical analysis of such trials come in two flavors: difference testing and equivalence testing. It is important to know the statistical properties of these, for example, the power to detect environmental change of a given magnitude, before the start of an experiment. Such prospective power analysis can best be studied by means of a statistical simulation model. This paper describes a general framework for simulating data typically encountered in environmental risk assessment of genetically modified plants. The simulation model, available as Supplementary Material, can be used to generate count data having different statistical distributions possibly with excess‐zeros. In addition the model employs completely randomized or randomized block experiments, can be used to simulate single or multiple trials across environments, enables genotype by environment interaction by adding random variety effects, and finally includes repeated measures in time following a constant, linear or quadratic pattern in time possibly with some form of autocorrelation. The model also allows to add a set of reference varieties to the GM plants and its comparator to assess the natural variation which can then be used to set limits of concern for equivalence testing. The different count distributions are described in some detail and some examples of how to use the simulation model to study various aspects, including a prospective power analysis, are provided.  相似文献   

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To assess risks of cultivation of genetically modified crops (GMCs) on non‐target arthropods (NTAs), field tests are necessary to verify laboratory results and in situations where exposure pathways are very complex and cannot be reproduced in the laboratory. A central concern in the design of field trials for this purpose is whether the tests are capable of detecting differences in the abundance or activity of NTAs in a treated crop in comparison with a non‐treated comparator plot. The detection capacity of a trial depends on the abundance and variability of the taxon, the values assumed for type I (α) and II (β) errors, and the characteristics of the trial and statistical design. To determine the optimal trial layout and statistical analysis, 20 field trials carried out in Spain from 2000 to 2009 to assess risks of GMCs on NTAs were examined with α and β set at 0.05 and 0.20, respectively. In this article we aim to determine the optimal number of sampling dates during a season, or longitudinal samples, in the design of field trials for assessing effects of GM maize on NTAs, and the ones that contribute most to achieving detectable treatment effects (dc) less than 50% of the mean of the control. Detection capacities are a function of the number of individual samples taken during the season but a high number of samples is rarely justified because gains of repeated sampling can be relatively low. These gains depend primarily on field tests relative experimental variability in individual samplings (i.e. experimental variability relative to the mean of the control in each sampling date) which in turn depends on the sampling method (visual counts, pitfall traps or yellow sticky traps) and the density (or abundance) of the taxon in question. Taxa showing more density (or abundance) have less relative experimental variability. The smaller the experimental variability, the lower the profit of increasing the number of sampling dates. Sticky traps have a good effect detection capacity and need very few sampling dates, whereas visual counts and pitfall traps have a poorer effect detection capacity and need more individual samples to achieve dc values lower than 50%. In maize field trials, it is recommended to concentrate sampling efforts in certain growth stages; the optimal ones for achieving an acceptable detection capacity are variable but, in general, samples in the first half of the season render better detection capacity than samples in the second half.  相似文献   

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This paper analyzes data from a study conducted by the United States Office of Naval Research on the effects of pulsed magnetic fields on chick embryos. The experiment involved incubation of eggs under carefully controlled conditions in six different laboratories. The original analysis included inappropriate statistical methodology for analyzing the experimental results. Since the conclusions from this study rest so heavily on the results of statistical analyses, choosing the proper methodology is imperative. The major aim of this paper then is to introduce more appropriate analytic tools and illustrate their use in the present context. Qualitatively our results agree with those of the original analysis; our findings about interactions between effects, however, makes interpretation of these effects more subtle. We apply linear logistic modeling to counts of damaged embryos, using as covariates factors corresponding to exposure, laboratory, incubator, run, and measurements of background radiation. This facilitates estimation of the size of the effects. The effects of laboratory, incubator, and run are explored both as fixed and random effects. We find statistically significant exposure and laboratory effects, in accordance with the original study. However, we also find that the inter-laboratory variation in exposure effect is at least as large as the exposure effect itself. The presence of such effects fundamentally alters the interpretation of the fitted model, as is graphically presented.  相似文献   

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转基因抗虫作物的商业化种植带来了显著的经济、生态和社会效益,对转基因抗虫作物的安全性评价也一直是国内外学者研究的热点。对生物非靶标效应的研究是转基因抗虫作物安全性评价的重要组成部分,农田天敌类生物是其中的重点内容之一。瓢虫是农田生态系统重要的捕食性天敌,评价其在转基因抗虫作物田间是否能通过捕食猎物或取食花粉而接触到杀虫蛋白并富集于体内,进而对自身产生一定的非靶标效应,这对捕食性瓢虫的安全性研究具有重要的意义。本文从捕食性天敌瓢虫的生命表参数、行为功能参数、田间群落参数及体内微环境指标等方面综述了转基因抗虫作物对瓢虫的安全性研究进展,并对后期转基因抗虫作物对田间捕食性天敌的研究方向提出了建议,以期为转基因抗虫作物的环境安全性研究提供理论指导和为进一步完善转基因抗虫作物对瓢虫安全性评价的技术体系提供系统的数据资料。  相似文献   

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王磊  杨超  卢宝荣 《生物多样性》2010,18(3):215-139
转基因技术及其产品是解决世界粮食问题的重要途径之一, 但是包括食品和环境安全在内的转基因生物安全评价是转基因技术及其产品商品化应用的前提和保证。现有的人为生物安全评价方法存在着一定的不足, 难以应对数量日益增加和内容日趋复杂的转基因产品的安全评价需求, 因此找寻一种客观和高效的评价方法势在必行。决策树(decision tree)方法是现今广泛使用的数据挖掘和分析的决策方法之一, 通过将需要解答问题的层层分解并分别解决, 最终得到理想的决策结果, 在处理复杂问题方面具有独特的优势。本文旨在通过介绍决策树的概念、特性、种类及其构建方法, 探索将决策树方法应用于建立转基因植物环境生物安全评价诊断平台的可行性, 并分析构建的诊断平台在高效、准确和客观地进行转基因植物环境生物安全评价, 以及对新一代转基因产品环境安全性的预测和普及环境安全知识等方面的优势, 为进一步推动转基因技术的发展和转基因产品的安全利用奠定基础。  相似文献   

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Assessing the impact of hybrids between transgenic plants and nontarget wild species involves answering several questions such as: (i) what are the hybridization and introgression rates; (ii) what is the behaviour of a transgene in a wild population; and (iii) what will be the consequences of the expression of a transgene in a wild population? These issues are discussed using results from experiments on oilseed rape and wild related Brassiceae. Evidence is given of large variations in the estimates of cross-fertilization probabilities. The first stage of introgression into wild populations is demonstrated to occur spontaneously through back-crossing. Population analysis may also be valuable to detect traces of past introgression. Data from the literature on weed biology, and especially herbicide resistance, are used to illustrate the behaviour of a new gene in weed populations. The need for computer models simulating the introgression process is stressed.  相似文献   

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Factors influencing the fate and impact of hybrids between crop plants and their related species operate from the early zygote, through to plant establishment in different habitats, to their ability to form self-sustaining populations. Many of the classes of genes being introduced by modern methods of genetic modification are similar to those manipulated by conventional plant breeding. In assessing the impact of transgenes in hybrids between crops and related species, therefore, it is important to be informed about the consequences of hybridization between conventionally bred varieties and their relatives. Some transgenes will have novel effects (e.g. production of pharmaceutical substances or certain fatty acids) on plants, and are likely to need specific assessment studies to determine their impact on hybrids. This will be particularly important if there is the possibility of these transgenes becoming established in wild populations. Some recommendations for further research are outlined.  相似文献   

9.
Genetically modified crops have been tested in 1,726 experimental releases in the EU member states and in 7,815 experimental releases in the USA. The global commercial cultivation area of genetically modified crops is likely to reach 50 million hectares in 2001, however, the commercial production of genetically modified crops in the EU amounts to only a few thousand hectares and accounts for only some 0.03% of the world production. A significant gap exists between the more than fifty genetically modified crop species already permitted to be cultivated and to be placed on the market in the USA, Canada and other countries and the five genetically modified crop species permitted for the same use in the EU member states, which are still pending inclusion in the Common Catalogue of agricultural plant species. The further development of the "green gene technology" in the EU will be a matter of public acceptance and administrative legislation.  相似文献   

10.
Forces affecting the rate of spread and increase of hybrids between genetically modified crop plants and their related species remain qualitatively similar, irrespective of whether genetic modification was achieved using traditional methods, those of biotechnology or as a result of the natural evolutionary process. However, the precise magnitude of the forces and, consequently, the likely environmental impact of such hybrids, may depend strongly on the nature of the gene or genes introduced into the native species. While many classes of transgenes are similar to those manipulated by conventional breeding techniques or evolution, biotechnology offers the potential to introduce genes into crops which are novel both from the point of view of function and origin. The qualitative similarity between transgenes and the products of conventional or evolutionary modification suggests that a historical view of the environmental impact of hybrids between traditionally produced crops or exotic species and their relatives would be of use in estimating the probable fate of hybrids containing transgenes in the environment. However, with certain classes of transgenes for which there are no existing analogues, there will need to be greater care in assessing the possible risks associated with release into the environment.  相似文献   

11.
Summary The kinds of data obtained in micropropagation studies are very often problematic, since they do not follow continous distribution and observations through culture vessels complicate measurement. Accordingly, standard analyses are often used, leading to misinterpretation of results. In this paper, we present a study of Viburnum opulus micropropagation using planned contrasts and fitting regression models in generalized linear models as an alternative statistical analysis of micropropagation results, and compare the results with that of traditional ANOVA. The advantages and possibilities of the alternative data analyses in plant tissue culture are discussed.  相似文献   

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Abstract 1. A 2‐year field study was conducted in 2000 and 2001 at a farm in Monmouth, Illinois to evaluate the effect of MON 863, a transgenic corn event that expresses the Cry3Bb1 protein for control of corn rootworms, on diverse groups of arthropod populations in a corn ecosystem. 2. The field study employed a split‐plot design with MON 863 and conventional corn as the main plots and several insecticide treatments as subplots; each main plot was replicated four times (i.e. n = 4 block replications for each corn variety). A large number of arthropod taxa were trapped, taxonomically characterised, and counted in all plots. A mixed linear repeated‐measures model was used for analysis of each taxon collected to determine if there was an effect of MON 863 or insecticide regime on that taxonomic group. 3. This report describes the results of a power analysis to determine the ability of the study design to detect an effect of MON 863 corn on the abundance of different groups of arthropods. A 50% difference in average taxon abundance between MON 863 and conventional corn plots was the criterion used in assessing the power. 4. A statistical power analysis of the taxonomic group comparisons made in the 2‐year field study (with independent assignment of treatments each year) showed that only about 28% (22 of 56) of the statistical comparisons made with single years of data achieved ≥80% power to detect a 50% difference in population density. When data from both years of the study were analysed jointly, this level of power was obtained for 86% (24 of 28) the comparisons made. 5. Graphical examination of the mean abundance and coefficient of variation (CV) for different taxa indicated that high abundance (> 5 trap captures per plot per sampling period) and low CV (< 100%) contributed to high statistical power (> 80%). Taxa with extremely low abundance (mean trap captures < 1 individual per plot per sampling period) generally had high CV (> 100%), and statistical comparisons for those taxa had lower power (< 80%). 6. The relevance of these findings for designing field studies on the effects of genetically modified crops on non‐target arthropods with desired levels of power is discussed.  相似文献   

13.
In country, non‐target arthropod (NTA) field evaluations are required to comply with the regulatory process for cultivation of genetically modified (GM) maize in Mexico. Two sets of field trials, Experimental Phase and Pilot Phase, were conducted to identify any potential harm of insect‐protected and glyphosate‐tolerant maize (MON‐89Ø34‐3 × MON‐88Ø17‐3 and MON‐89Ø34‐3 × MON‐ØØ6Ø3‐6) and glyphosate‐tolerant maize (MON‐ØØ6Ø3‐6) to local NTAs compared to conventional maize. NTA abundance data were collected at 32 sites, providing high geographic and environmental diversity within maize production areas from four ecological regions (ecoregions) in northern Mexico. The most abundant herbivorous taxa collected included field crickets, corn flea beetles, rootworm beetles, cornsilk flies, aphids, leafhoppers, plant bugs and thrips while the most abundant beneficial taxa captured were soil mites, spiders, predatory ground beetles, rove beetles, springtails (Collembola), predatory earwigs, ladybird beetles, syrphid flies, tachinid flies, minute pirate bugs, parasitic wasps and lacewings. Across the taxa analysed, no statistically significant differences in abundance were detected between GM maize and the conventional maize control for 69 of the 74 comparisons (93.2%) indicating that the single or stacked insect‐protected and herbicide‐tolerant GM traits generally exert no marked adverse effects on the arthropod populations compared with conventional maize. The distribution of taxa observed in this study provides evidence that irrespective of variations in overall biodiversity of a given ecoregion, important herbivore, predatory and parasitic arthropod taxa within the commercial maize agroecosystem are highly similar indicating that relevant data generated in one ecoregion can be transportable for the risk assessment of the same or similar GM crop in another ecoregion.  相似文献   

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Abstract:  A convertible glasshouse was established to study annual transgenic plants under near-field environmental conditions while simultaneously ensuring a high level of biological containment. This system can provide a useful step in the assessment of transgenic plants prior to open-field experiments. Two transgenic wheat lines (cv. Bobwhite) were investigated and compared with their corresponding non-transformed wildtypes with respect to plant performance, expression of the transgenic trait and interactions with antagonists. The first line expressed snowdrop lectin [ Galanthus nivalis agglutinin (GNA)] for enhanced resistance to aphids, and the second one overexpressed the endogenous Lr10 gene to enhance resistance to leaf rust. Interestingly, 1000-kernel weight of Lr10 -transgenic plants was significantly reduced, indicating that the overexpression of the Lr10 gene caused a significant fitness cost for the plant. GNA-transgenic plants expressed the lectin at levels too low to affect the target aphids. A detached leaf bioassay with Lr10 -transgenic plants revealed an increased resistance to leaf rust. No differences in the performance of aphids or cereal leaf beetles on transgenic and non-transformed plants were recorded in the convertible glasshouse and in complementary glasshouse studies. Similarly, infection levels with powdery mildew did not differ between transgenic and non-transformed plants but Bobwhite plants were significantly more infected when compared with conventional Swiss spring wheat cultivars. Overall, the assessment revealed that for the plants investigated here, their genetic background had a stronger impact on the performance of a plant and its interactions with insect herbivores and pathogens than the expression of the transgene.  相似文献   

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The current article explores whether the application of generalized linear models (GLM) and generalized estimating equations (GEE) can be used in place of conventional statistical analyses in the study of ordinal data that code an underlying continuous variable, like entheseal changes. The analysis of artificial data and ordinal data expressing entheseal changes in archaeological North African populations gave the following results. Parametric and nonparametric tests give convergent results particularly for P values <0.1, irrespective of whether the underlying variable is normally distributed or not under the condition that the samples involved in the tests exhibit approximately equal sizes. If this prerequisite is valid and provided that the samples are of equal variances, analysis of covariance may be adopted. GLM are not subject to constraints and give results that converge to those obtained from all nonparametric tests. Therefore, they can be used instead of traditional tests as they give the same amount of information as them, but with the advantage of allowing the study of the simultaneous impact of multiple predictors and their interactions and the modeling of the experimental data. However, GLM should be replaced by GEE for the study of bilateral asymmetry and in general when paired samples are tested, because GEE are appropriate for correlated data. Am J Phys Anthropol 153:473–483, 2014. © 2013 Wiley Periodicals, Inc.  相似文献   

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Pesticide use leads to complex exposure and response patterns in non-target aquatic species, so that the analysis of data from standard toxicity tests may result in unrealistic risk forecasts. Developing models that are able to capture such complexity from toxicity test data is thus a crucial issue for pesticide risk assessment. In this study, freshwater snails from two genetically differentiated populations of Lymnaea stagnalis were exposed to repeated acute applications of environmentally realistic concentrations of the herbicide diquat, from the embryo to the adult stage. Hatching rate, embryonic development duration, juvenile mortality, feeding rate and age at first spawning were investigated during both exposure and recovery periods. Effects of diquat on mortality were analysed using a threshold hazard model accounting for time-varying herbicide concentrations. All endpoints were significantly impaired at diquat environmental concentrations in both populations. Snail evolutionary history had no significant impact on their sensitivity and responsiveness to diquat, whereas food acted as a modulating factor of toxicant-induced mortality. The time course of effects was adequately described by the model, which thus appears suitable to analyse long-term effects of complex exposure patterns based upon full life cycle experiment data. Obtained model outputs (e.g. no-effect concentrations) could be directly used for chemical risk assessment.  相似文献   

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重组DNA技术的发展为培育高效的抗虫作物提供了前所未有的便利条件。通过转基因技术,全世界已培育出众多转基因抗虫植物品系。其中,表达苏云金芽孢杆菌(Bt)基因的作物品系如Bt棉花和Bt玉米已在很多国家大规模种植,在害虫控制方面发挥了重要的作用。转基因抗虫作物可能带来的生态风险问题,如对农田非靶标节肢动物的潜在影响,一直受到相关研究者及民众的广泛关注。至今,已有大量研究论文发表。本文在总结、归纳前人研究的基础上,阐述了从实验室到田间多层次评价转基因抗虫作物对非靶标生物影响的一般研究程序和方法,并简要综述了Bt玉米和Bt棉花2种已商业化种植的转基因抗虫作物对农田非靶标节肢动物生态影响的研究进展。现有研究表明:当前种植的Bt作物所表达的Cry蛋白杀虫专一性非常强,对农田非靶标节肢动物没有毒性;且Bt作物的利用降低了广谱化学杀虫剂的施用量,从而提高了非专一性害虫天敌的种群密度,加强了对害虫的控制,并有效地保护了生态环境和农民健康。因此,Bt作物可以作为害虫综合防治(IPM)的一个策略,结合其他防治措施可加强对害虫的有效控制。  相似文献   

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This study compares the efficiency of pot trials in the glasshouse or outdoors, and trials on undisturbed soil cores (100 cm deep; 15 cm wide), at simulating field trials. Yields of spring barley (Hordeum vulgare, cv Julia) were measured at sites on seven soil series on 11 farms, and also on undisturbed soil cores from the same sites, and in pot trials using disturbed soil from the same sites, to ascertain how far data from the core and pot trials (simulation procedures) could be used to generate the models, regressions or generalisations that were produced by more laborious and time-consuming field trials. There was no evidence of interactions between the soil series and simulation procedures. Correlations between field yields and yields from simulation procedures showed that the undisturbed cores gave the highest correlation (r=0.59**) with field yields. This was followed by yields measured in outdoor pot trials (r=0.36** and 0.67** in two years), and by pot trials in the glasshouse (r=0.11 and 0.25, neither significant). In regressions of field yield on yields from simulation trials, the intercept on the field yield axis was lowest for cores and highest for pot trials in the glasshouse. Anovar studies on the partitioning of the total variability in trial yields showed that undisturbed cores gave a partitioning of yields more similar to that of field trials than did the pot trials. In some respects, but not all, core trials also gave the most similar regressions of yield on soil properties to those obtained from field trials. The use of undisturbed cores, collected at sites of interest and carried to a central site, combines the advantages of field trials (natural soil structure and environment) with those of pot trials (standard environment, easier management).  相似文献   

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