Distribution of Myxomycetes on coarse woody debris of <Emphasis Type="Italic">Pinus densiflora</Emphasis> at different decay stages in secondary forests of western Japan

The relationship between myxomycete species and the decay stage of wood of Pinus densiflora coarse woody debris was investigated in warm temperate secondary forests of western Japan. The number of species and species diversity of the myxomycete community reached the maximum on moderately decayed wood. The 25 dominant species recorded from 8 or more samples of the total 1530 samples were arranged in order of the succession index corresponding to the stage of decay. Species on slightly decayed hard pine wood were characterized by Stemonitis splendens, Enerthenema papillatum, and Physarum viride, whereas species of Cribrariaceae were found on brittle decayed soft wood increasing abundance according to the decay stages. Most of the species occurred where there was sufficient moisture preserved in the environment of the decaying wood, although S. splendens specifically emerged in low-moisture environments. Because the myxomycete species had preference to different decay stages of wood, it appears that they change sequentially during myxomycete community succession on dead pine wood according to the progression of decay.     

Association between myxomycetes and the decay stage of coarse woody debris in an evergreen broadleaf forest in warm temperate Japan

Myxomycetes inhabit coarse woody debris in varying stages of decay; however, their ecology in the dead wood of evergreen broadleaf trees is not well known. In this study, we examined the relationships between myxomycete species and the decay stage of wood from fallen trees in an evergreen broadleaf forest in Japan. Myxomycete species richness and abundance were calculated for eight stages of decay in fallen logs, according to the appearance and wood hardness of log portions. A total of 70 myxomycete species (including varieties) were found on the logs. Moderately decayed wood was the preferred habitat of myxomycetes (57 species; 81% of the total) and most species inhabited moist decayed wood. Analysis by nonmetric multidimensional scaling enabled the differentiation of myxomycete assemblages, with five groupings recognized across the progression of decay. Forty-two species preferred a particular decay stage, represented by the decay index. Physarum viride and Stemonitis splendens particularly preferred the less-decayed wood and Stemonitopsis typhina var. similis especially inhabited the well-decayed wood. Species from the order Physarales dominated the less-decayed wood, whereas Trichiales and Liceales species dominated the softer well-decayed wood. Myxomycetes diversity was high in and varied among logs with various stages of decay in a typical Japanese evergreen forest.     

Geographical distribution of myxomycetes on coniferous deadwood in relation to air temperature in Japan

This study obtained information on the biogeographical distribution of lignicolous myxomycetes in temperate regions in Japan. It examined how climatic variables are related to patterns of occurrence in myxomycete communities. Sixty-four taxa were recorded on coniferous wood in 15 forest sites in summer. Common species that were abundant and widely distributed in Japan included Stemonitis axifera, Lycogala epidendrum, and Cribraria cancellata. In addition, Lindbladia cribrarioides was characteristic on dead Pinus densiflora wood in southwestern Japan. The species diversity index (H′) of the myxomycete communities was positively correlated with the annual mean temperature. The distribution of myxomycete communities was analyzed using nonmultidimensional scaling (NMDS). The ecological nature of the gradients expressed by the first two NMDS axes was that the first axis was found to correspond strongly to changes in the average minimum temperature and the latitude, and the second axis was related to a complex of factors, including altitude. The relative abundance of certain species in a myxomycete community on Japanese red pine changed in relation to the annual mean temperature, e.g., Lycogala epidendrum correlated negatively while Stemonitopsis hyperopta did so positively. We conclude that air temperatures can be used to predict the geographical distribution of lignicolous myxomycetes in this temperate region of Japan.     

Patterns of saproxylic beetle succession in loblolly pine

• 1 Patterns of insect succession in dead wood remain unclear, particularly beyond the first several years of decay. In the present study, saproxylic beetles were sampled from loblolly pine (Pinus taeda L.) logs aged between 1 month and 9 years old using both emergence traps attached to logs in the field and rearing bags in the laboratory.
• 2 Species richness peaked within the first year as a result of a diverse assemblage of bark beetles, wood‐borers and predators associated with young logs. After the phloem phase, there were no significant differences in species richness among decay classes.
• 3 Beetle communities differed significantly among decay classes, with 25 and seven species being significantly associated with young and old logs, respectively.

     

Community structure of polypores (Basidiomycota) in Andean alder wood in Argentina: Functional groups among wood‐decay fungi?

Abstract The polypores (Aphyllophorales s.l., Basidiomycota) are very effective wood decayers. Different species differ in their capacity to decay wood; therefore, many functionally different species can be found decaying different substrate conditions (decay stages and log diameter). This study aimed to describe the structure of the wood‐decay polypore communities that occur on different states of wood of the Andean alder (Alnus acuminata) within Argentina and to identify groups of polypore species that share the same substrate condition, and thus might have a similar functional role in the decay processes. We found 16 polypore species, among which Trametes versicolor, Bjerkandera adusta and Trametes cubensis were dominant species, showing the highest relative frequency in alder wood. Species richness was lower on trunks of living trees and higher on dead branches. Based on preferential occurrence on different wood conditions, a cluster analysis distinguished three groups, each of them containing one of the three dominant species. This corresponds to the situation of other groups of organisms, where each functional type consists of a dominant species that accounts for most of the ‘function’ and several subordinate species with similar functions. Albeit preliminary, our results provide a formal classification of wood‐decay fungi into functional types.     

Comparison of wood-inhabiting myxomycetes in subalpine and montane coniferous forests in the Yatsugatake Mountains of Central Japan

To demonstrate altitudinal gradients (and resulting temperatures) that affect myxomycete biodiversity and species composition, we statistically compared myxomycete assemblages between a subalpine coniferous forest and a montane pine forest within the region of the Yatsugatake Mountains, Nagano Prefecture, Central Japan. In summer and autumn field surveys during 2003–2010, 53 myxomycete taxa (with varieties treated as species) were observed from 639 records of fruiting bodies in the subalpine forest and 32 taxa were detected from 613 records in the montane forest. There were 20 species in common between the assemblages and the percentage similarity index was 0.400. Myxomycete biodiversity was higher in the subalpine than in the montane forest. Nine myxomycete species were statistically frequent occurrences in the subalpine forest and appeared in autumn: Lamproderma columbinum, Cribraria macrocarpa, Trichia botrytis, Physarum newtonii, Diderma ochraceum, Enteridium splendens, Elaeomyxa cerifera, Trichia verrucosa, and Colloderma oculatum. Five species were restricted to appear in the subalpine forest: Cribraria purpurea, Cribraria rufa, Cribraria ferruginea, Cribraria piriformis, and Lepidoderma tigrinum. Dead wood in the subalpine forest provided a breeding habitat for specific myxomycetes that inhabit cold areas; that is those areas having geographical features of decreasing temperature and increasing elevation, such as the temperate area of Central Japan.     

Fungal wood decomposer activities influence community structures of myxomycetes and bryophytes on coarse woody debris

Dead wood is an important habitat for forest organisms, and wood decay fungi are the principal agents determining the dead wood properties that influence the communities of organisms inhabiting dead wood. In this study, we investigated the effects of wood decomposer fungi on the communities of myxomycetes and bryophytes inhabiting decayed logs. On 196 pine logs, 72 species of fungi, 34 species and seven varieties of myxomycetes, and 16 species of bryophytes were identified. Although white rot was the dominant decay type in sapwood and heartwood, brown and soft rots were also prevalent, particularly in sapwood. Moreover, white rot and soft rot were positively and brown rot negatively correlated with wood pH. Ordination analyses clearly showed a succession of cryptogam species during log decomposition and showed significant correlations of communities with the pH, water content, and decay type of wood. These analyses indicate that fungal wood decomposer activities strongly influence the cryptogam communities on dead wood.     

Inhibition and Stimulation Effects in Communities of Wood Decay Fungi: Exudates from Colonized Wood Influence Growth by Other Species

The effects of exudates from uncolonized and from partly decayed beech wood on the extension rates of 16 later stage decay fungi were investigated. The partly decayed wood had been colonized by the pyrenomycete Eutypa spinosa, or the basidiomycetes Fomes fomentarius, Stereum hirsutum, and Trametes versicolor, all known as common early decay agents in European beech forests. Sterilized wood pieces were placed onto 0.5% malt agar, opposite to small agar plugs containing the test fungi. The latter showed very variable and species-specific growth responses to the various wood types. The presence of uncolonized wood stimulated extension rates in many species, whereas the four previously decayed wood types had variable stimulatory or inhibitory effects. Wood decayed by S. hirsutum resulted in reduced extension rate, delayed growth, or total inhibition in the majority of species, thus it is suggested that this species uses secondary metabolites in a defensive strategy. A single species was, however, stimulated in the presence of S. hirsutum-decayed wood. In contrast, the presence of wood decayed by F. fomentarius was stimulatory to 45% of the species. The other previously decayed wood types generally resulted in more variable responses, depending upon species. The results are discussed in an ecological context and it is suggested that the exudates from the partly decayed wood that are responsible for the reported effects may function as infochemicals, structuring microbial communities in wood.     

Lichen diversity on stumps in relation to wood decay in subalpine forests of Northern Italy

Although several studies demonstrated the importance of dead wood for lichen conservation in N-Europe and N-America, the lichen biota on dead wood was poorly studied in the Alps, where stumps represent one of the main available dead wood type. This work aims at evaluating species richness and composition of lichens in relation to the decay of stumps in subalpine forests of the Italian Alps. Differences in species richness between three decay stages were tested using a one-way ANOVA, while the pattern of species composition was evaluated with non-metric multidimensional scaling and an Indicator Species Analysis. Overall, 69 species were found and wood decay proved to be an important factor influencing lichen communities on stumps in our subalpine forests. Despite the fact that the mean number of species per stump did not differ between the three decay stages and lichen communities broadly overlapped, a main pattern of species turnover was identified across wood decay process as well as some indicator species for each decay stage. During the decay process, lichen communities change functional and ecological composition as an adaptive response to the continuous change of substrate. Since stumps host several nationally rare species, which are related to different stages of decay, they could have a relevant role in lichen conservation in managed forests where other types of dead wood are normally absent.     

A new species of Lamproderma (Myxomycetes) from Costa Rica

Lamproderma magniretisporum, a new species of myxomycete from Costa Rica, is described and illustrated. This new species is characterized by its lignicolous habitat, long stalk, dark radial capillitium, large spores, and reticulate spore ornamentation. The stability of the taxonomic characters of L. magniretisporum is supported by two well-developed collections. The morphology of the sporocarp was subjected to detailed study with both the light microscope and the scanning electron microscope. Micrographs of all relevant features are presented. Taxonomic novelty Lamproderma magniretisporum G. Moreno, C. Rojas, S.L. Stephenson & H. Singer     

Small-scale variation in chemical property within logs of Japanese beech in relation to spatial distribution and decay ability of fungi

Fungal communities within a naturally fallen bough of Japanese beech (Fagus crenata) were investigated with reference to chemical properties of decay columns. Five logs were cut out from the fallen bough, which ranged from 10.7 to 20.5 cm in diameter. Nine fungal species and one sterile fungus were isolated from decay columns that elongated along a longitudinal axis and were delimited by black zone lines and wood discoloration. Lampteromyces japonicus and Trichoderma spp. were isolated from all five logs. Lampteromyces japonicus and Antrodiella albocinnamomea occupied the largest volume in the logs. Lignin and carbohydrate contents, lignocellulose index (LCI), nitrogen content, and water content were different among decay columns colonized by different fungal species in each log. In L. japonicus, LCI of decay column was correlated to that of wood blocks decayed under pure culture condition by the fungi isolated from the decay columns. These results suggest that the small-scale variation in chemical properties within fallen logs of Japanese beech reflects the distribution and the decay ability of colonized fungi.     

Species richness and substrate specificity of lignicolous fungi in the canopy of a temperate,mixed deciduous forest

In the more than twenty years in which long-term canopy research has been conducted, mycology has been largely disregarded. Our studies using a construction crane to gain access to the canopy of a forest in Leipzig, Germany are the first long term investigations assessing the diversity and ecology of wood-decaying fungi in a canopy. Thirty-seven individuals of nine different tree species with a large amount of dead wood were selected. Sampling focussed on the four most prominent tree species Acer pseudoplatanus, Fraxinus excelsior, Quercus robur and Tilia cordata. In the years 2002 and 2003 dead wood was collected in different canopy strata. Dead branches were removed and stored for two weeks in open boxes with high humidity to allow growth of fructifications in the laboratory. 118 different taxa were identified (108 species, 77 genera). Corticioid fungi (e.g., of Corticiaceae, Stereaceae, Hymenochaetaceae) dominated the fungal composition with 37 species, pyrenomycetes were present with 18 species. Agaric fungi (Agaricales and Cortinariales) were scarce. Species with minute basidiomes dominated the fungal composition of this systematic group. Agarics with larger sporomes were found only once and were restricted to strongly decayed branches in shaded canopy areas. Concerning species richness and fungal composition the four tree species mentioned above differed remarkably. As expected, many fungi that grew on bark or slightly decayed wood showed a distinct host and substratum specifity. It is noteworthy that fungi which are purportedly to be non-specific were found on single tree species only.     

The decay of similarity with geographical distance in parasite communities of vertebrate hosts

Aim The rate at which similarity in species composition decays with increasing distance was investigated among communities of parasitic helminths in different populations of the same host species. Rates of distance decay in similarity of parasite communities were compared between populations of fish and mammal hosts, which differ with respect to their vagility and potential to disperse parasite species over large distances. Location Data on helminth communities were compiled for several populations of three mammalian host species (Ondatra zibethicus, Procyon lotor and Canis latrans) and three fish host species (Perca flavescens, Catostomus commersoni and Esox lucius) from continental North America. Methods Distances between localities and similarity in the composition of helminth communities, the latter computed using the Jaccard index, were calculated for all possible pairs of host populations within each host species. Similarity values were then regressed against distance to see if they decayed at exponential rates, as reported for plant communities; the significance of the regressions was assessed using randomization tests. Results The number of hosts examined per population did not correlate with the number of helminth species found per population, and thus sampling effort is unlikely to have confounded the results. In four (two mammals and two fish) of the six host species, similarity in helminth communities decayed exponentially with distance. When the log of similarity is plotted against untransformed distance, the slopes obtained for the two fish species are lower than those obtained for the two mammalian host species. Main conclusions Similarity in the composition of parasite communities appears to decay exponentially with increasing distance in some host species, but not in all host species. The rate of decay is not necessarily associated with the vagility of the host. Although distance decay of similarity is generally occurring, it seems that other ecological processes, related either to the host or its habitat, can obscure it.     

A study of yeasts during the delignification and fungal transformation of wood into cattle feed in Chilean rain forest

In Chilean rain forest the presence and distribution of yeasts were studied during the fungal transformation of wood, producing a partially delignified material used as cattle feed (huempe). A total of 68 yeast species was reported, including a noticeable proportions of basidiomycetous and xylose-assimilating strains, the latter related to the increased availability of this sugar in the decayed wood. The results of the mathematic comparison of taxonomic data of 327 strains showed a delimitation of sharp clusters corresponding to different species, including several new species described from this substrate, and genera, as Rhodotorula and Cryptococcus.At the initial stages of wood decay, characterized by the presence of Candida species, yeast diversity was low. The highest values were found in the medium stage of decay, used as feed, with an important presence of the genera Apiotrichum, Rhodotorula, Cryptococcus and Schizoblastosporion. After establishing a non-linear ordination from Euclidean distances between samples, based on yeast abundances, a relationship was observed between the populations developing at the different stages of wood decay by Ganoderma applanatum. A succession of yeast species was demonstrated during wood degradation by this white-rot fungus.     

Long‐term vegetation changes in experimentally grazed and ungrazed back‐barrier marshes in the Wadden Sea

Abstract. Vegetation succession in three back‐barrier salt marshes in the Wadden Sea was studied using a data set comprising 25 years of vegetation development recorded at permanent quadrats. The effect of livestock grazing on succession was assessed by comparing quadrats where grazing was experimentally prevented or imposed. We studied changes at the species level as well as at the level of the plant community. Special attention is given to effects on plant species richness and community characteristics that are relevant for lagomorphs (hares and rabbits) and geese. Inundation frequency and grazing were most important in explaining the variation in species abundance data. The three marshes studied overlap in the occurrence of different plant communities and the observed patterns were consistent between them. Clear differences in frequency and abundance of plant species were observed related to grazing. Most plant species had a greater incidence in grazed treatments. Species richness increased with elevation, and was 1.5 to 2 × higher in the grazed salt marsh. Grazing negatively influenced Atriplex portulacoides and Elymus athericus, whereas Puccinellia maritima and Festuca rubra showed a positive response. The communities dominated by Elymus athericus, Artemisia maritima and Atriplex portulacoides were restricted to the ungrazed marsh. Communities dominated by Puccinellia maritima, Juncus gerardi and Festuca rubra predominantly occurred at grazed sites. As small vertebrate herbivores prefer these plants and communities for foraging, livestock grazing thus facilitates for them.     

Communities of uropodine mites (Acari: Mesostigmata) in selected oak-hornbeam forests of the Wielkopolska region (Poland)

Pristine oak-hornbeam forests are among the richest flora and fauna environments in Poland. The agricultural development of the Wielkopolska region has led to the replacement of forest area with farmland. Consequently, the oak-hornbeam forests became fragmented, resulting in the isolation of local arthropod populations. The aim of this study was to compare the communities of uropodine mites in selected parts of a forest, differing in stand age and composition, physical soil condition and degree of anthropogenic pressure. Species composition of mite communities in a forest near Duszniki (West Poland), transformed by humans, was compared with the mite species composition observed in three nature reserves in its close vicinity. The analyses showed that Trachytes aegrota and Olodiscus minima constitute more than 50% of all communities in each type of tree stand. Diversity in Uropodina communities was higher in older tree stands, as well as in protected areas. Some species, such as Uroobovella pulchella, Uroobovella pyriformis and Dinychus woelkei, are related to specific microhabitats (e.g., they inhabit only dead wood) but there are also ubiquitous species, occurring in all types of environment, e.g., Oodinychus ovalis. Species like Oodinychus karawaiewi and Dinychura cordieri indicate a high degree of forest disturbance. Presence of such species as Trachytes lamda, Cilliba rafalskii, Cilliba cassideasimilis and Trematurella elegans points at high naturalness of soil in oak-hornbeam forests. These species have been found in old (>100 years old) tree stands, where Uropodina communities were also the richest.     

Long‐term forest structure and regeneration after wildfire in Russian Karelia

We examined forest structure and regeneration in a 350‐ha forest dominated by Pinus sylvestris 31 yr after a wildfire in the Vienansalo wilderness, Russian Karelia. In most parts of the area, the 1969 fire was not stand replacing but had left larger trees alive so that the area generally remained forest covered. In some localities, however, all trees apparently died and distinct gaps were formed, suggesting that the fire severity varied considerably, contributing to increased variation in stand structure. Living and dead wood volumes were similar, 112 and 96 m³.ha^‐1, respectively. The tree species proportions of dead vs living wood indicated that prior to fire disturbance Picea was more common in the area. Regeneration was abundant (saplings, ca. 14 000 ind.ha^‐1, height 20 ‐200 cm) and tree seedling recruitment had occurred over a long period of time. Regeneration density was highest on the mesic Vaccinium‐Myrtillus forest site type, decreasing towards nutrient‐poor site types. The most common regeneration microsites were level ground (56% of saplings), immediate surroundings of decayed wood (23%) and depressions (11%). The high proportion of saplings on level ground suggests that after the fire regeneration conditions have been favourable across the whole forest floor. Nevertheless, the areas in the vicinity of decayed wood have been particularly important microsites for seedling establishment. The results provide an example of the effects of wildfire on forest structure in a natural Pinus sylvestris dominated forest, demonstrating the non stand replacing character of fire, high variability in stand structure and the abundance of post‐fire regeneration.     

The importance of forest type,tree species and wood posture to saproxylic wasp (Hymenoptera) communities in the southeastern United States

Although the forests of the southeastern United States are among the most productive and diverse in North America, information needed to develop conservation guidelines for the saproxylic (i.e., dependent on dead wood) fauna endemic to the region is lacking. Particularly little is known about the habitat associations and requirements of saproxylic parasitoids even though these organisms may be even more vulnerable than their hosts. We sampled parasitoids emerging from dead wood taken from two forest types (an upland pine-dominated forest and a lowland hardwood-dominated forest), three tree species (Liquidambar styraciflua L., Pinus taeda L., and Quercus nigra L.) and two wood postures (standing dead trees (i.e., snags) and fallen logs) in South Carolina. Parasitoid abundance did not differ between forest types or among tree species, but did differ between wood postures, being higher in snags than logs. This difference may have been due to the logs being in contact with the ground or surrounding vegetation and therefore less accessible to parasitoids. Parasitoid abundance and density decreased with height on both snags and logs. Species richness did not differ between forest types, among tree species or between wood postures. According to analysis of similarities, parasitoid communities did not differ between forest types, but did differ among tree species. The wasp communities associated with the different tree species and posture combinations were distinct. In addition, communities associated with the upper boles and crowns of snags were distinct from those occurring lower on snags. These results emphasize the importance of maintaining tree diversity in managed forests as well as retaining or creating entire snags at the time of harvest.     

Successional development of wood-inhabiting fungi associated with dominant tree species in a natural temperate floodplain forest

Fungi play a crucial role in dead wood decay, being the major decomposers of wood and affecting microbiota associated with dead wood. We sampled dead wood from five deciduous tree species over more than forty years of decay in a natural European floodplain forest with high tree species diversity. While the assembly of dead wood fungal communities shows a high level of stochasticity, it also indicates clear successional patterns, with fungal taxa either specific for early or late stages of wood decay. No clear patterns of fungal biomass content over time were observed. Out of 220 major fungal operational taxonomic units, less than 8% were associated with a single tree species, most of them with Quercus robur. Tree species and wood chemistry, particularly pH, were the most important drivers of fungal community composition. This study highlights the importance of dead wood and tree species diversity for preserving the biodiversity of fungi.     

Establishment of ectomycorrhizal fungal community on isolated Nothofagus cunninghamii seedlings regenerating on dead wood in Australian wet temperate forests: does fruit-body type matter?

Decaying wood provides an important habitat for animals and forms a seed bed for many shade-intolerant, small-seeded plants, particularly Nothofagus. Using morphotyping and rDNA sequence analysis, we compared the ectomycorrhizal fungal community of isolated N. cunninghamii seedlings regenerating in decayed wood against that of mature tree roots in the forest floor soil. The /cortinarius, /russula-lactarius, and /laccaria were the most species-rich and abundant lineages in forest floor soil in Australian sites at Yarra, Victoria and Warra, Tasmania. On root tips of seedlings in dead wood, a subset of the forest floor taxa were prevalent among them species of /laccaria, /tomentella-thelephora, and /descolea, but other forest floor dominants were rare. Statistical analyses suggested that the fungal community differs between forest floor soil and dead wood at the level of both species and phylogenetic lineage. The fungal species colonizing isolated seedlings on decayed wood in austral forests were taxonomically dissimilar to the species dominating in similar habitats in Europe. We conclude that formation of a resupinate fruit body type on the underside of decayed wood is not necessarily related to preferential root colonization in decayed wood. Rather, biogeographic factors as well as differential dispersal and competitive abilities of fungal taxa are likely to play a key role in structuring the ectomycorrhizal fungal community on isolated seedlings in decaying wood.