Exploring the structural requirements for jasmonates and related compounds as novel plant growth regulators: A current computational perspective

Jasmonates and related compounds have been highlighted recently in the field of plant physiology and plant molecular biology due to their significant regulatory roles in the signaling pathway for the diverse aspects of plant development and survival. Though a considerable amount of studies concerning their biological effects in different plants have been widely reported, the molecular details of the signaling mechanism are still poorly understood. This review sheds new light on the structural requirements for the bioactivity/property of jasmonic acid derivatives in current computational perspective, which differs from previous research that mainly focus on their biological evaluation, gene and metabolic regulation and the enzymes in their biosynthesis. The computational results may contribute to further understanding the mechanism of drug-receptor interactions in their signaling pathway and designing novel plant growth regulators as high effective ecological pesticides.Key words: jasmonates, amino acid conjugates of jasmonic acid, plant growth regulators, quantitative structure-activity relationship, quantitative structure-property relationship, a mini-review     

茉莉酸信号转导突变体ber15 的分离和基因克隆表明油菜素内酯的合成影响茉莉酸信号转导

bestatin是一种氨肽酶抑制剂, 能够激活茉莉酸信号转导途径而诱导抗性相关基因的表达, 从而为用化学遗传学手段解析茉莉酸途径提供了一个有效的工具。ber15是我们鉴定到的一个对bestatin不敏感的拟南芥突变体, 随后的研究表明该突变体对外源茉莉酸的敏感性也明显降低, 表明相应的野生型基因BER15在茉莉酸信号转导中起重要作用。图位克隆结果表明BER15编码一个细胞色素P450单加氧酶, 是植物激素油菜素内酯合成途径中的一个关键酶。对BER15基因功能的深入研究将会为了解油菜素内酯的合成与茉莉酸信号途径间的互作关系提供证据。     

在伤信号传导中茉莉酸与水杨酸的关系

近年来,发现茉莉酸和水杨酸都是植物体对外界伤害作出反应,表达抗性基因的信号分子。水杨酸可抑制茉莉酸类的合成及其所诱导的蛋白基因的表达;茉莉酸能阻止病原侵染后所产缮乃钏岬脑黾印＼岳蛩嵝藕抛纪揪逗退钏嵝藕抛纪揪洞嬖谧沤徊妫。牵裕薪岷蛋白和细胞分裂素可能起着信号开关的作用。     

茉莉酸信号转导突变体ber15的分离和基因克隆表明油菜素内酯的合成影响茉莉酸信号转导

bestatin是一种氨肽酶抑制剂,能够激活茉莉酸信号转导途径而诱导抗性相关基因的表达,从而为用化学遗传学手段解析茉莉酸途径提供了一个有效的工具。ber15是我们鉴定到的一个对bestatin不敏感的拟南芥突变体,随后的研究表明该突变体对外源茉莉酸的敏感性也明显降低,表明相应的野生型基因BER15在茉莉酸信号转导中起重要作用。图位克隆结果表明BER15编码一个细胞色素P450单加氧酶,是植物激素油菜素内酯合成途径中的一个关键酶。对BER15基因功能的深入研究将会为了解油菜素内酯的合成与茉莉酸信号途径间的互作关系提供证据。     

Phytohormone Conjugates: Nature and Function

Reversible hormone conjugations in plants may represent physiologically and biochemically essential pathways in the regulation of endogenous levels of biologically active pools of phytohormones. Conjugates of auxins, gibberellins, and cytokinins are now widely recognized as serving a storage function for rapid (im)mobilization of these phytohormones, depending on a variety of environmental, developmental, and physiological factors. The significance of conjugates of other phytohormones (abscisic acid, ethylene, jasmonic acid, and salicylic acid) is less well understood. Recent developments in studies on phytohormone conjugation, involving both biochemical and molecular biology approaches, are presented here. The nature and possible functions of the conjugates are discussed. Conjugates of other compounds (e.g., anthranilate-glucosides) are also known (for review, see Hösel, 1981). However, it is not known whether these compounds have a signaling function.     

植物的环境信号分子茉莉酸及其生物学功能

茉莉酸信号分子参与植物生长发育众多生理过程的调控,尤其是作为环境信号分子能有效地介导植物对生物及非生物胁迫的防御反应。迄今已知具有信号分子生理功能的至少包括茉莉酸(jasmonic acid,JA)以及茉莉酸甲酯(methyl jasmonate,Me JA)和茉莉酸-异亮氨酸复合物(jasmonoyl-isoleucine,JA-Ile)等茉莉酸衍生物,统称为茉莉酸类化合物(jasmonates,JAs)。从环境信号分子角度介绍了茉莉酸信号的启动(环境信号感知与转导、茉莉酸类化合物合成)、传递(局部传递、维管束传输、空气传播)和生物学功能(茉莉酸信号受体、调控的转录因子、参与的生物学过程)。     

Jasmonates as Signals in the Wound Response

Plant responses to wounding and herbivore attack are orchestrated by complex signaling pathways that link the production of chemical and physical signals at the wound site to activation of gene expression and other cellular processes. The systemic nature of many wound-induced responses provides an attractive opportunity to study intercellular signaling pathways that operate over long distances within the plant. Genetic dissection of the wound-response pathway in tomato indicates that (1) systemin and its precursor protein, prosystemin, are upstream components of an intercellular signaling cascade that requires the biosynthesis and action of jasmonic acid (JA); and (2) physiological processes regulated by this pathway confer host resistance to a broad spectrum of plant invaders. Grafting experiments conducted with mutants defective in systemic wound signaling indicate that systemin functions at or near the wound site to trigger the production of JA, which in turn acts non-cell autonomously to promote systemic defense responses. The location of JA biosynthetic enzymes within the companion cell-sieve element complex of vascular bundles, together with the accumulation of JA in vascular tissues, support a role for jasmonates as phloem-mobile signals. The recent discovery of enzymes involved in the metabolism of JA to volatile methyl-JA and bioactive JA-amino acid conjugates has potential implications for the mechanism by which JA promotes wound signaling. Species-specific differences in the mechanism of wound signaling appear to reflect the way in which the wound-induced jasmonate pathway is regulated by other signals including systemin, cell wall-derived oligosaccharides, ethylene, and insect-derived elicitors. Adding to the complexity of the wound-induced jasmonate cascade are wound-signaling pathways that operate independently of JA.     

The role of the octadecanoid pathway in the production of terpenoid indole alkaloids in Catharanthus roseus hairy roots under normal and UV‐B stress conditions

The octadecanoid pathway is responsible for producing jasmonic acid an important signaling molecule in plants, which controls the production of a variety of secondary metabolites. Previously the exogenous addition of jasmonic acid to Catharanthus roseus hairy roots caused an increase in terpenoid indole alkaloid (TIA) accumulation. The role of the endogenous production of jasmonic acid by the octadecanoid pathway in the production of TIAs in C. roseus hairy roots is examined. Feeding of octadecanoid pathway inhibitors suggests that the octadecanoid pathway does not actively control TIA production under normal growth conditions or during the UV‐B stress response in C. roseus hairy roots. Biotechnol. Bioeng. 2009;103: 1248–1254. © 2009 Wiley Periodicals, Inc.     

Jasmonic Acid is Induced in a Biphasic Manner in Response of Pea Seedlings to Wounding

The role of jasmonic acid (JA) in plant wounding response has been demonstrated. However, the source of JA in wound signaling remains unclear. In the present study, pea seedlings were used as material to investigate the systemic induction of JA and the activation of lipoxygenase (LOX)-dependent octadecanoid pathway upon wounding. The results showed that endogenous JA could induce two peaks in the wounded leaves and the stalks, while only one peak in the systemic leaves.LOX activity and its protein amount were also induced and the stimulation mainly occurred in the late phase, while one peak of induction was present after pretreatment with JA. Applied nordihydroguaiaretic acid (NDGA), an inhibitor of LOX activity, only inhibited the induction of JA in the late phase, and the resistance of pea was impaired. Furthermore, 13(S)-hydroperoxy-9(Z), 11 (E)-octadecadienoic acid (13(S)-H(P)ODE) was confirmed to be the main product of LOX throughout the experimental time. In addition, immunocytochemical analysis also revealed the occurrence of JA biosynthesis and transport upon wounding. These results demonstrated that wound-induced JA in wounded leaves resulted from Its biosynthesis and conversion from its conjugates, while in systemic leaves resulted from its transport and biosynthesis; and proved that the LOX pathway was vital to the wound-induced defense response involved in JA biosynthesis.     

微生物诱导的植物系统抗性

综述了由植物病原菌和非病原性的根际促生菌诱导产生的两种植物系统抗性:系统获得性抗性(SAR)和系统诱导抗性(ISR),比较了两类系统抗性的诱导、信号分子和机理的异同点,阐述了信号分子水杨酸在系统获得性抗性诱导过程中的作用及茉莉酸和乙烯在系统诱导抗性产生过程中的作用。     

植物脂肪酸β-氧化的研究进展

脂肪酸的分解代谢在多数有机体中主要通过β-氧化循环进行,在哺乳动物中β-氧化作用发生在线粒体和过氧化物酶体中,而植物和多数真菌类的β-氧化作用只发生在过氧化物酶体中。植物界的过氧化物酶体β-氧化作用不仅存在于脂肪酸的分解代谢和脂质代谢中,也存在于植物激素和氨基酸的代谢中。近来对模式生物的研究发现,过氧化物酶体β-氧化途径在植物信号系统和发育,尤其是茉莉酸的生物合成中起着重要作用。简要介绍了β-氧化途径在脂肪酸分解代谢、植物信号系统和发育中的作用的研究进展。     

Juvenile hormone connects larval nutrition with target of rapamycin signaling in the mosquito Aedes aegypti

Anautogenous mosquitoes require blood meals to promote egg development. If adequate nutrients are not obtained during larval development, the resulting "small" sized adult mosquitoes require multiple blood meals for egg development; markedly increasing host-vector contacts and the likelihood of disease transmission. Nutrient-sensitive target of rapamycin (TOR) signaling is a key signaling pathway that links elevated hemolymph amino acid levels derived from the blood meal to the expression of yolk protein precursors in the fat body. Here we report that the blood-meal-induced activation of the TOR-signaling pathway and subsequent egg maturation depends on the accumulation of adequate nutritional reserves during larval development. We have established well-nourished, "standard" mosquitoes and malnourished, "small" mosquitoes as models to address this nutrient sensitive pathway. This regulatory mechanism involves juvenile hormone (JH), which acts as a mediator of fat body competence, permitting the response to amino acids derived from the blood meal. We demonstrate that treatment with JH results in recovery of the TOR molecular machinery, Aedes aegypti cationic amino acid transporter 2 (AaiCAT2), TOR, and S6 kinase (S6K), in fat bodies of small mosquitoes, enabling them to complete their first gonotrophic cycle after a single blood meal. These findings establish a direct link between nutrient reserves and the establishment of TOR signaling in mosquitoes.     

Crosstalk between jasmonic acid, ethylene and Nod factor signaling allows integration of diverse inputs for regulation of nodulation

Plant hormones interact at many different levels to form a network of signaling pathways connected by antagonistic and synergistic interactions. Ethylene and jasmonic acid both act to regulate the plant's responsiveness to a common set of biotic stimuli. In addition ethylene has been shown to negatively regulate the plant's response to the rhizobial bacterial signal, Nod factor. This regulation occurs at an early step in the Nod factor signal transduction pathway, at or above Nod factor-induced calcium spiking. Here we show that jasmonic acid also inhibits the plant's responses to rhizobial bacteria, with direct effects on Nod factor-induced calcium spiking. However, unlike ethylene, jasmonic acid not only inhibits spiking but also suppresses the frequency of calcium oscillations when applied at lower concentrations. This effect of jasmonic acid is amplified in the ethylene-insensitive mutant skl, indicating an antagonistic interaction between these two hormones for regulation of Nod factor signaling. The rapidity of the effects of ethylene and jasmonic acid on Nod factor signaling suggests direct crosstalk between these three signal transduction pathways. This work provides a model by which crosstalk between signaling pathways can rapidly integrate environmental, developmental and biotic stimuli to coordinate diverse plant responses.     

Enzymes in jasmonate biosynthesis – Structure,function, regulation

Jasmonates are a growing class of lipid-derived signaling molecules with diverse functions ranging from the initiation of biotic and abiotic stress responses to the regulation of plant growth and development. Jasmonate biosynthesis originates from polyunsaturated fatty acids in chloroplast membranes. In a first lipoxygenase-catalyzed reaction molecular oxygen is introduced to yield their 13-hydroperoxy derivatives. These fatty acid hydroperoxides are converted by allene oxide synthase and allene oxide cyclase to 12-oxophytodienoic acid (OPDA) and dinor-OPDA, i.e. the first cyclic intermediates of the pathway. In the subsequent step, the characteristic cyclopentanone ring structure of jasmonates is established by OPDA reductase. Until recently, jasmonic acid has been viewed as the end product of the pathway and as the bioactive hormone. It becomes increasingly clear, however, that biological activity extends to and may even differ between the various jasmonic acid metabolites and conjugates as well as its biosynthetic precursors. It has also become clear that oxygenated fatty acids give rise to a vast variety of bioactive compounds including but not limited to jasmonates. Recent insights into the structure, function, and regulation of the enzymes involved in jasmonate biosynthesis help to explain how this variety is generated while specificity is maintained.     

壳寡糖对烟草悬浮细胞茉莉酸合成基因转录的影响

采用RT-PCR方法研究了不同浓度壳寡糖对烟草悬浮细胞茉莉酸合成酶基因的转录调控。结果表明,50μg·mL^-1壳寡糖能够明显诱导烟草悬浮细胞茉莉酸合成途径的关键酶——磷脂酶A2、13-脂氧合酶、丙二烯氧化物合成酶、丙二烯氧化物环化酶和12-氧-植物二烯酸还原酶基因的表达,而且该浓度的壳寡糖对这些基因的诱导作用相同（似）。在实验设定时间内均诱导表达编码磷脂酶A2的基因,对其它基因的诱导时间均为8小时,表明50μg·mL^-1壳寡糖在诱抗过程中启动了茉莉酸合成途径。而200μg·mL^-1壳寡糖的处理对这些基因的表达无显著影响。表明不同浓度的壳寡糖对烟草悬浮细胞的作用模式存在差异,且高浓度的壳寡糖在烟草悬浮细胞中启动的信号通路可能没有茉莉酸信号的参与。     

Metabolism of Fatty Acid Hydroperoxides by Chlorella pyrenoidosa

The green alga Chlorella pyrenoidosa was examined for its ability to metabolize 13-hydroperoxylinoleic and 13-hydroperoxylinolenic acids. The study showed that Chlorella extracts possessed hydroperoxide dehydrase and other enzymes of the jasmonic acid pathway. However, under normal laboratory conditions for culture growth, neither jasmonic acid nor metabolites of the jasmonic acid pathway were present in Chlorella. In vitro enzyme studies also revealed the presence of hydroperoxide lyase activity that cleaved 13-hydroperoxylinoleic or 13-hydroperoxylinolenic acid into two products, 13-oxo-cis-9,trans-11-tridecadienoic acid and pentane (from linoleic acid) or pentene (from linolenic acid). The lyase was heat-labile, insensitive to 50 millimolar KCN, and had an approximate molecular weight of 48,000 as estimated by gel filtration. Two other products, 13-hydroxy-cis-9,trans-11,cis-15-octadecatrienoic acid and 12, 13-trans-epoxy-9-oxo-trans-10,cis-15-octadecadienoic acid, were also observed. Because these compounds are also products of nonenzymic, Fe(II)-catalyzed hydroperoxide decomposition reactions, their presence suggested that the observed lyase activity may occur via a homolytic decomposition mechanism.     

Inverse correlation between jasmonic acid and salicylic acid during early wound response in rice

This study presents a kinetic analysis of the response to wounding in rice plants. In particular, jasmonic acid, salicylic acid, and lipoxygenase activity were measured in leaves of wounded rice plants during the early tillering phase. The results show that endogenous jasmonic acid transiently increases to a maximum 30 min after wounding (jasmonic acid burst) and lipoxygenase activity increases after the jasmonic acid burst, but not after the second smaller peak of endogenous jasmonic acid 23 h after wounding. In contrast, endogenous salicylic acid decreases during the jasmonic acid burst, such that the kinetic profiles of jasmonic acid and salicylic acid are inversely correlated during the early response to wounding. It is proposed here that the increase in endogenous jasmonic acid and the decrease in endogenous salicylic acid may contribute for establishing the efficient negative cross-talk between jasmonic acid and salicylic acid signaling pathways during the early response to wounding in rice.     

mTORC1通路中氨基酸信号转导相关机制研究进展

雷帕霉素靶点蛋白（target of rapamycin,TOR）作为细胞内重要的生长和代谢调节中枢,主要通过形成两种复合物TORC1与TORC2发挥其功能。其中TORC1接收广泛的细胞内信号,如氨基酸水平、生长因子、能量以及缺氧状态等,通过调控蛋白质合成来促进细胞的增殖与生长。在这些信号当中,氨基酸不仅能够激活TORC1通路,还同时作为其他信号激活TORC1的必需条件。目前,对于生长因子和能量水平激活TORC1过程的分子机制已有较深入的认识,而对于氨基酸信号如何转导至TORC1的分子机制直到近年来才有了新的突破。该文通过梳理已发表的哺乳动物细胞中氨基酸信号调控mTORC1分子机制的相关实验结论,对该领域的研究方向进行了总结和展望。