Methylammonium uptake by Escherichia coli: evidence for a bacterial NH4+ transport system.

Energy-dependent concentrative uptake of ¹⁴CH₃NH₃⁺ by cells of $\text{Escherichia coli}$ provides preliminary evidence for one or more transport systems for NH₄⁺ uptake. NH₄⁺, but not glutamic acid, inhibited the uptake of ¹⁴CH₃NH₃⁺. Varying the pH for the uptake assays exposed two apparent systems: one maximally functioning at pH 7 that was strongly inhibited by cyanide or by the uncoupler $\text{m}$-chlorophenyl carbonylcyanide hydrazone and another maximally functioning at pH 9 and resistant to cyanide or $\text{m}$-chlorophenyl carbonylcyanide hydrazone. Kinetic analysis showed considerable experimental variability from day to day. Often simple Michaelis-Menten kinetics were not followed, but NH₄⁺ was reproducibly a stronger inhibitor of uptake of ¹⁴CH₃NH₃⁺ than was nonradioactive CH₃NH₃⁺.     

The energy barriers to ion transport by nonactin across thin lipid membranes

The experimental steady-state current-voltage relations for low concentrations of a neutral carrier and an ion may be fitted theoretically either by assuming a form for the potential dependence of the rate of transfer of complex across the membrane and adjusting the proposed nature of the association-dissociation reactions or by assuming equilibrium for the association and adjusting the potential dependence of the transfer process. Different dependences for the rate of transfer correspond, at least formally, to different shapes for the potential energy barrier which the complex must cross. By comparing measurements of the current-voltage relations for non-actin with Na⁺, K⁺, and NH₄⁺, it is possible to distinguish between the effeects of the various rates. For black lipid membranes made from glycerolmonooleate+$\text{n-}\text{hexadecane}$, the potential energy barrier is high with a narrow top, but the rate of association still becomes increasingly limiting for Na⁺, K⁺ and NH₄⁺, in the order given. For bacterial phosphatidylethanolamine, with $\text{n-}\text{decane}$ the barrier is much wider and no effect of the rate of association can be detected.     

Monovalent cation requirement for ADP inhibition of pyruvate dehydrogenase kinase

ADP is a competitive inhibitor with respect to ATP for pyruvate dehydrogenase kinase. Evidence is presented that K⁺ or NH₄⁺ ions are required for inhibition of the kinase by ADP. K⁺ at 30–90 mM and NH₄⁺ at 1–5 mM decrease markedly the apparent K_i of bovine kidney pyruvate dehydrogenase kinase for ADP and also decrease, to a lesser extent, the apparent K_m for ATP. Na⁺ is less effective and, in addition, inhibits kinase activity. Since K⁺ and NH₄⁺ are not required for kinase activity, their effect appears to be primarily of regulatory significance. K⁺ and NH₄⁺ have little effect, if any, on pyruvate dehydrogenase phosphatase activity. When both the kinase and the phosphatase are present and functional, the near steady state activity of the pyruvate dehydrogenase complex is affected significantly by varying the concentration of K⁺ or NH₄⁺ at a fixed ADP/ATP concentration ratio and by varying the $\text{ADP}\text{ATP}$ ratio at a fixed concentration of monovalent cation.     

Effect of NH+4 and K+ on the activity of the ribosomal subunits in the EF-G- and EF-T-dependent GTR hydrolysis

$\text{E. coli}$ 50S ribosomal subunits show in the absence of 30S subunits and at low NH₄⁺ or K⁺ high turnover activity in EF-G-dependent GTP hydrolysis which is inhibited by increasing concentrations of monovalent cations. At 80 mM NH₄⁺ or K⁺ this activity is already 70–80% inhibited. This effect is reversed by 30S which are stimulatory with an optimum at about 80 mM for NH₄⁺ and 20–40 mM for K⁺. At low NH₄⁺ or K⁺ (<5 mM) stimulation by 30S of maximal 50S activity depends on the [EF-G]/[50S]. Unlike EF-G, EF-T does not show any Phe-tRNA-dependent GTPase activity with 50S alone even at low concentrations of NH₄⁺ or K⁺.     

Release of the "ammonia effect" on three catabolic enzymes by NADP-specific glutamate dehydrogenaseless mutations in Saccharomyces cerevisiae

Mutations which inactivate the NADP-glutamate dehydrogenase (anabolic GDHase) pleiotropically release the ammonia inhibition (NH₄⁺ effect) on a number of distinct catabolic activities. In addition to releasing inhibition on several permeability functions (1), these mutations suppress the NH₄⁺ effect on the synthesis of arginase, urea amidolyase and allantoinase. They do not affect the NH₄⁺ effect on the NAD-glutamate dehydrogenase.Two mechanisms of action of these mutations have to be considered, namely a modification of the process of $\text{induction}$ (such as removal of inducer exclusion) and a suppression of $\text{nitrogen catabolite repression}$.     

Effect of NH3 on c-AMP associated activities and extracellular c-AMP production in Dictyostelium discoideum.

A model of morphogenetic regulation in $\text{Dictyostelium discoideum}$ (1) is based on the assumption that NH₃ inhibits the synthesis and/or release of extracellular 3′,5′-cyclic AMP and that by topographical restriction of c-AMP production to specified zones within the cell aggregate, NH₃ is presumed to set up the conditions for apical dominance and directed morphogenetic movements. This study indicates that: exposure of preaggregative cells to exogenous NH₃ + NH₄⁺ inhibits the acquisition of c-AMP-induced properties associated with aggregation competence (accumulation of specific contact sites required to form EDTA resistant aggregates and the synthesis of extracellular and membrane-bound c-AMP phosphodiesterase); exposure of aggregation competent cells which are actively producing extracellular c-AMP to exogenous NH₃ + NH₄⁺ is followed by the immediate cessation of extracellular c-AMP release. The pH dependence of these effects suggests that the active species is NH₃.     

Identification of inner- and outer-sphere reaction pathways in the reduction of iron-sulphur proteins with a chromium(II)-macrocycle complex

When parsley [2Fe-2S] and $\text{C. pasteurianum}$ 2[4Fe-4S] proteins in the normal oxidised state are reduced 1:1 with Cr(II) (15-aneN₄) (H₂O)₂²⁺ the Cr(III) product remains attached to the protein and reduction is by an inner-sphere mechanism. With $\text{Chromatium}$ high potential [4Fe-4S] protein and $\text{C. pasteurianum}$ rubredoxin the Cr(III) product is not attached to the protein and the mechanism is outer-sphere. Results are discussed in the context of protein crystallographic information. The Cr(III) product is not attached to the Fe₂S₂ core (extrusion experiments) or to the cysteinyl S-atoms (ESR). Negative patches close to the active site remain possible alternatives.     

Occurrence of a new polyamine,canavalmine, in the sword bean Canavalia gladiata

A new tetraamine was detected in the seed of sword bean $\text{Canavalia gladiata}$ and named canavalmine. The chemical structure was determined to be NH₂ (CH₂) ₄NH(CH₂) ₃NH(CH₂) ₄NH₂ (1,13-diamino-5,9-diazatridecane) based on gas chromatography-mass spectrometry after derivatization of polyamines with pentafluoropropionic anhydride. The proof of identity was established by comparison of infrared and ¹H-NMR spectra of the tetraamine isolated from sword bean with those of a synthetic compound.     

NH4 + transport system of a psychrophilic marine bacterium, Vibrio sp. strain ABE-1

NH₄ ⁺ transport system of a psychrophilic marine bacterium Vibrio sp. strain ABE-1 (Vibrio ABE-1) was examined by measuring the uptake of [¹⁴C]methylammonium ion (¹⁴CH₃NH^{3 +}) into the intact cells. ¹⁴CH₃NH₃ ⁺ uptake was detected in cells grown in medium containing glutamate as the sole nitrogen source, but not in those grown in medium containing NH₄Cl instead of glutamate. Vibrio ABE-1 did not utilize CH₃NH₃ ⁺ as a carbon or nitrogen source. NH₄Cl and nonradiolabeled CH₃NH₃ ⁺ completely inhibited ¹⁴CH₃NH₃ ⁺ uptake. These results indicate that ¹⁴CH₃NH₃ ⁺ uptake in this bacterium is mediated via an NH₄ ⁺ transport system and not by a specific carrier for CH₃NH₃ ⁺. The respiratory substrate succinate was required to drive ¹⁴CH₃NH₃ ⁺ uptake and the uptake was completely inhibited by KCN, indicating that the uptake was energy dependent. The electrochemical potentials of H⁺ and/or Na⁺ across membranes were suggested to be the driving forces for the transport system because the ionophores carbonylcyanide m-chlorophenylhydrazone and monensin strongly inhibited uptake activities at pH 6.5 and 8.5, respectively. Furthermore, KCl activated ¹⁴CH₃NH₃ ⁺ uptake. The ¹⁴CH₃NH₃ ⁺ uptake activity of Vibrio ABE-1 was markedly high at temperatures between 0° and 15°C, and the apparent K _m value for CH₃NH₃ ⁺ of the uptake did not change significantly over the temperature range from 0° to 25°C. Thus, the NH₄ ⁺ transport system of this bacterium was highly active at low temperatures. Received: August 1, 1998 / Accepted: October 8, 1998     

Stimulating effects of monovalent cations on activator-dissociated and activator-associated states of Ca2+-ATPase in human erythrocytes

The additional activation by monovalent cations of the $\text{(Ca}{}^{\mathrm{2+}}\text{+ Mg}{}^{\mathrm{2+}}\text{)-dependent}$ ATPase (ATP phosphohydrolase, EC 3.6.1.3) in human erythrocyte membranes was studied.The Ca²⁺-ATPase occurs in two different states. In the A-state the enzyme is virtually free of protein activator and the kinetics of Ca²⁺ activation is characterized by low apparent Ca²⁺ affinity and low maximum activity. In the B-state the enzyme is associated with activator and the kinetics is characterized by high Ca²⁺ affinity and high maximum activity.At optimum concentrations of Ca²⁺ the additional activation of the B-state by K⁺, NH₄⁺, Na⁺ and Rb⁺ exceeded the corresponding activations of the A-state, and half-maximum activations by K⁺, NH₄⁺, and Na⁺ were achieved at lower concentrations in the B-state than in the A-state. Li⁺ and Cs⁺ activated the two states almost equally but maximum activation was obtained at lower cation concentrations in the B-state than in the A-state.The activation of the B-state by the various cations decreased in the order $\text{K}{}^{\mathrm{+}}\text{> NH}{}_4{}^{\mathrm{+}}\text{> Na}{}^{\mathrm{+}}\text{= Rb}{}^{\mathrm{+}}\text{> Li}{}^{\mathrm{+}}\text{= Cs}{}^{\mathrm{+}}$. The A-state was activated almost equally by K⁺, Na⁺, NH₄⁺, and Rb⁺ and to a smaller extent by Li⁺ and Cs⁺.At sub-optimum concentrations of Ca²⁺ high concentrations of monovalent cations (100 mM) activated the Ca²⁺-ATPase equally in the A-state and the B-state. In the absence of Ca²⁺ the monovalent cations inhibited the Mg²⁺-dependent ATPase in both types of membranes. This dependence on Ca²⁺ indicates that the monovalent cations interact with the Ca²⁺ sites in the B-state.The results suggest that K⁺ or Na⁺, or both, contribute to the regulation of the Ca²⁺ pump in erythrocytes.     

Alterations in the control of glutamate uptake in mutants of Aspergillus nidulans

A mutation, $\text{amdT}$19, which leads to inability to grow on glutamate as the sole nitrogen source but does not affect growth on glutamate as the sole source of carbon and nitrogen, is shown to result in increased repression of glutamate uptake by glucose. An allelic mutation, $\text{amdT}$102, results in insensitivity to glucose repression. Glutamate uptake is still sensitive to NH₄⁺ repression in the presence of glucose in these strains. Starvation for a carbon source leads to relief of NH₄⁺ repression.     

Yeast phosphofructokinase. 3. Comparison of the allosteric properties of PFKs and PFKd(MgF + )

Yeast phosphofructokinase (PFK) exists in two forms, an ATP-sensitive form, PFKs, and a desensitized form, PFKd(MgF⁺). PFKs exhibits sigmoidal kinetics with respect to Fru-6-P, whereby the S_{0.5, Fru-6-P} is determined by [ATP]. This form of PFK is inhibited by ATP and citrate and allosterically activated by Fru-6-P and AMP. NH₄⁺ activates PFKs and enhances its affinity for substrate Fru-6-P (1–3).PFKd(MgF⁺) in contrast is not inhibited by ATP and citrate, nor activated by Fru-6-P and AMP. Kinetics of the reaction with PFKd(MgF⁺) with respect to Fru6-P are hyperbolic, with $\text{K}{}_{\mathrm{m}}\text{=}\text{1}\text{4}\text{?}\text{1}\text{5}$ of S_{0.5, Fm-6-P} for PFKs. NH₄⁺ strongly activates this form.In terms of the model of Monod et al. (4), PFKd(MgF⁺) corresponds to a fixed R-conformation, while PFKs is a limiting T-conformation.     

Minimal functional unit for transport and enzyme activities of (Na+ + K+)-ATPase as determined by radiation inactivation

Frozen aqueous suspensions of partially purified membrane-bound renal (Na⁺ + K⁺)-ATPase have been irradiated at –135°C with high-energy electrons. (Na⁺ + K⁺)-ATPase and K⁺-phosphatase activities are inactivated exponentially with apparent target sizes of $\text{184 ± 4 kDa and 125 ± 3 kDa}$, respectively. These values are significantly lower then found previously from irradiation of lyophilized membranes. After reconstitution of irradiated (Na⁺ + K⁺)-ATPase into phospholipid vesicles the following transport functions have been measured and target sizes calculated from the exponential inactivation curves: ATP-dependent Na⁺?K⁺ exchange, $\text{201 ± 4}\text{kDa}$; (ATP + P_i)-activated Rb⁺?Rb⁺ exchange, $\text{206 ± 7}\text{kDa}$ and ATP-independent Rb⁺?Rb⁺ exchange, $\text{117 ± 4}\text{kDa}$. The apparent size of the α-chain, judged by disappearance of Coomassie stain on SDS-gels, lies between 115 and 141 kDa. That for the β-glycoprotein, though clearly smaller, could not be estimated. We draw the following conclusions: (1) The simplest interpretation of the results is that the minimal functional unit for (Na⁺ + K⁺)-ATPase is αβ. (2) The inactivation target size for (Na⁺ + K⁺)-dependent ATP hydrolysis is the same as for ATP-dependent pumping of Na⁺ and K⁺. (3) The target sizes, for K⁺-phosphatase (125 kDa) and ATP-independent Rb⁺?Rb⁺ exchange (117 kDa) are indistinguishable from that of the α-chain itself, suggesting that cation binding sites and transport pathways, and the $\text{p-}\text{nitrophenyl}$ phosphate binding site are located exclusively on the α-chain. (4) ATP-dependent activities appear to depend on the integrity of an αβ complex.     

Characterization of gastric mucosal membranes. IX. Fractionation and purification of K+-ATPase-containing vesicles by zonal centrifugation and free-flow electrophoresis technique

Methods are described for purification of a vesicular membrane fraction of hog gastric mucosa using differential centrifugation, density gradient separation on zonal rotors and free-flow electrophoresis. As a result a fraction is obtained enriched 40-fold in terms of K⁺-ATPase and free of any other enzyme marker other than K⁺-activated $\text{p-}\text{nitrophenyl}$ phosphatase.the 5′-nucleotidase and basal Mg²⁺-ATPase are clearly separated from the latter enzymes.Osmotic shock, Triton X-100 treatment or K⁺ ionophores increased the K⁺-ATPase activity in isotonic conditions, but $\text{K}{}^{\mathrm{+}}\text{-p-}\text{nitrophenyl}$ phosphatase is not affected by these treatments, nor is the ATPase activity in the presence of NH₄⁺. The results suggest that the electrophoretic fraction contains a major population of tight vesicles, whose permeability to K⁺ is rate limiting for the ATPase activity but not for the $\text{p-}\text{nitrophenyl}$ phosphatase activity. It is concluded that K⁺ site for the ATPase is internal whereas the K⁺ site for the $\text{p-}\text{nitrophenyl}$ phosphatase is external, hence, the K⁺ site must be mobile across the membrane.     

Ammonium and Methylammonium Transport in Egeria densa Leaves in Conditions of Different H+ Pump Activity

Previous data in Egeria densa leaves demonstrated a strong inhibitory effect of Cs⁺ on passive K⁺ influx and on K⁺-induced, ATP-dependent electrogenic proton extrusion. In this paper we analyzed, using the same material, the effects of Cs⁺ on ammonium (NH₄⁺) and methylammonium (CH₃NH₃⁺) transport in order to elucidate whether a common transport system for K⁺ and NH₄⁺ could be demonstrated. The effects of Cs⁺ on NH₄⁺- and CH₃NH₃⁺-induced titratable H⁺ extrusion (–ΔH⁺) and on transmembrane electrical potential difference (E_m) in E. densa leaves were analyzed in parallel. All experiments were run either in the absence or presence of fusicoccin, corresponding to low or high H⁺-ATPase activity and membrane hyperpolarization and leading, in this material, to respectively active or passive transport of K⁺. The results suggest the presence in E. densa leaves of two distinct pathways for NH₄⁺ uptake: one in common with NH₄⁺ and (with lower affinity) CH₃NH₃⁺, insensitive to Cs⁺, and a second system, operating at higher H⁺-ATPase activity and E_m hyperpolarization, strongly inhibited by Cs⁺ and impermeable to CH₃NH₃⁺. In agreement with this hypothesis, Xenopus laevis oocytes injected with the KAT1 RNA of Arabidopsis thaliana were permeable to K⁺ and NH₄⁺, but not to CH₃NH₃⁺.     

Hydrophobic ion probe studies of membrane dipole potentials

Hydrophobic anions of dipicrylamine and of sodium tetraphenylborate have been employed as probes of interfacial dipole potential variations in lipid bilayer membranes. Systematic variation of dipole potentials has been achieved by introduction of compounds incorporating N⁺ and B^? charge centers. Distribution of hydrophilic and and hydrophobic groups relative to these charge centers has been shown to control the orientation in the membrane/solution interface of the electric dipole moment formed by these centers. Thus triphenyl-[4-trimethylphenylammonium] borate orients with the B^? center, surrounded by phenyl groups, embedded in the membrane, while the smaller methylated N⁺ center is directed toward the aqueous phases. This orientation has been confirmed using dipicrylamine probe ions. Results obtained in this system have been interpreted quantitatively using a previously developed model incorporating discrete charge effects. A second class of compounds, $\text{tri}\text{-n-}\text{alkylamine}$ borane (T_nAB) complexes having the generic formula (C_nH_{$\text{2n+1}$})₃N⁺B^?H₃, have also been synthesized for this study, using even-carbon alkyls ranging from ethyl to decyl. Molecular orientation of the complex is with the N⁺ center and its associated alkyl groups directed into the membranes, while the protonated B^? center is directed toward the aqueous phases, as confirmed by use of tetraphenylborate ions as probes.     

Effects of L-methionine-DL-sulfoximine and beta-N-oxalyl-L-alpha, beta-diaminopropionic acid on nitrogenase biosynthesis and activity in Rhodopseudomonas capsulata.

Inhibitors of glutamine synthetase cause derepression of nitrogenase biosynthesis in the presence of $\text{NH}{}_4{}^{\mathrm{+}}$ in the photosynthetic bacterium Rhodopseudomonas capsulata. A new derepressor of nitrogenase biosynthesis, β-N-oxalyl-L-α,β-diaminopropionic acid (ODAP), is here compared with the widely used L-methionine-DL-sulfoximine (MSX). With both compounds, a quantitative correlation has been observed between inhibition of glutamine synthetase and derepression of nitrogenase biosynthesis. We also find that both MSX and ODAP inhibit nitrogenase activity in vivo in R. capsulata. The latter effect seems to be indirect and related to the previously reported reversible inhibition of nitrogenase activity in vivo by $\text{NH}{}_4{}^{\mathrm{+}}$. As a control it was observed that neither $\text{NH}{}_4{}^{\mathrm{+}}$ nor MSX nor ODAP inhibit nitrogenase activity in vivo in Clostridium pasteurianum.     

Use of chemical ionization for GC–MS metabolite profiling

Metabolite profiling is commonly performed by GC–MS of methoximated trimethylsilyl derivatives. The popularity of this technique owes much to the robust, library searchable spectra produced by electron ionization (EI). However, due to extensive fragmentation, EI spectra of trimethylsilyl derivatives are commonly dominated by trimethylsilyl fragments (e.g. m/z 73 and 147) and higher m/z fragment ions with structural information are at low abundance. Consequently different metabolites can have similar EI spectra, and this presents problems for identification of “unknowns” and the detection and deconvolution of overlapping peaks. The aim of this work is to explore use of positive chemical ionization (CI) as an adjunct to EI for GC–MS metabolite profiling. Two reagent gases differing in proton affinity (CH₄ and NH₃) were used to analyse 111 metabolite standards and extracts from plant samples. NH₃-CI mass spectra were simple and generally dominated by [MH]⁺ and/or the adduct [M+NH₄]⁺. For the 111 metabolite standards, m/z 73 and 147 were less than 3% of basepeak in NH₃-CI and less than 30% of basepeak in CH₄-CI. With CH₄-CI, [MH]⁺ was generally present but at lower relative abundance than for NH₃-CI. CH₄-CI spectra were commonly dominated by losses of CH₄ [M+1-16]⁺, 1–3 TMSOH [M+1-nx90]⁺, and combinations of CH₄ and TMSOH losses [M+1-nx90-16]⁺. CH₄-CI and NH₃-CI mass spectra are presented for 111 common metabolites, and CI is used with real samples to help identify overlapping peaks and aid identification via determination of the pseudomolecular ion with NH₃-CI and structural information with CH₄-CI.

     

Use of chemical ionization for GC–MS metabolite profiling

Metabolite profiling is commonly performed by GC–MS of methoximated trimethylsilyl derivatives. The popularity of this technique owes much to the robust, library searchable spectra produced by electron ionization (EI). However, due to extensive fragmentation, EI spectra of trimethylsilyl derivatives are commonly dominated by trimethylsilyl fragments (e.g. m/z 73 and 147) and higher m/z fragment ions with structural information are at low abundance. Consequently different metabolites can have similar EI spectra, and this presents problems for identification of “unknowns” and the detection and deconvolution of overlapping peaks. The aim of this work is to explore use of positive chemical ionization (CI) as an adjunct to EI for GC–MS metabolite profiling. Two reagent gases differing in proton affinity (CH₄ and NH₃) were used to analyse 111 metabolite standards and extracts from plant samples. NH₃-CI mass spectra were simple and generally dominated by [MH]⁺ and/or the adduct [M+NH₄]⁺. For the 111 metabolite standards, m/z 73 and 147 were less than 3% of basepeak in NH₃-CI and less than 30% of basepeak in CH₄-CI. With CH₄-CI, [MH]⁺ was generally present but at lower relative abundance than for NH₃-CI. CH₄-CI spectra were commonly dominated by losses of CH₄ [M+1-16]⁺, 1–3 TMSOH [M+1-nx90]⁺, and combinations of CH₄ and TMSOH losses [M+1-nx90-16]⁺. CH₄-CI and NH₃-CI mass spectra are presented for 111 common metabolites, and CI is used with real samples to help identify overlapping peaks and aid identification via determination of the pseudomolecular ion with NH₃-CI and structural information with CH₄-CI.