Phylogenetic relationships of tropical western Atlantic snappers in subfamily Lutjaninae (Lutjanidae: Perciformes) inferred from mitochondrial DNA sequences

Phylogenetic relationships among 20 nominal species of tropical lutjanine snappers (Lutjanidae) (12 from the western Atlantic, one from the eastern Pacific, and seven from the Indo‐Pacific) were inferred based on 2206 bp (712 variable, 614 parsimony informative) from three protein‐coding mitochondrial genes. Also included in the analysis were DNA sequences from two individuals, identified initially as Lutjanus apodus, which were sampled off the coast of Bahia State in Brazil (western Atlantic), and from three individuals labelled as ‘red snapper’ in the fish market in Puerto Armuelles, Panama (eastern Pacific). Bayesian posterior probabilities and maximum‐likelihood bootstrap percentages strongly supported monophyly of all lutjanines sampled and the hypothesis that western Atlantic lutjanines are derived from an Indo‐Pacific lutjanine lineage. The phylogenetic hypothesis also indicated that oceans where lutjanines are distributed (western Atlantic, eastern Pacific, and Indo‐Pacific) are not reciprocally monophyletic for the species distributed within them. There were three strongly supported clades that included all western Atlantic lutjanines: one included six species of Lutjanus from the western Atlantic, two species of Lutjanus from the eastern Pacific, and the monotypic genera Rhomboplites and Ocyurus (western Atlantic); one that included three, probably four, species of Lutjanus in the western Atlantic; and one that included Lutjanus cyanopterus (western Atlantic), an unknown species of Lutjanus from the eastern Pacific, and three species of Lutjanus from the Indo‐Pacific. Molecular‐clock calibrations supported an early Miocene diversification of an Indo‐Pacific lutjanine lineage that dispersed into the western Atlantic via the Panamanian Gateway. Divergent evolution among these lutjanines appears to have occurred both by vicariant and ecological speciation: the former following significant geographic or geological events, including both shoaling and closure of the Panamanian Gateway and tectonic upheavals, whereas the latter occurred via phenotypic diversification inferred to indicate adaptation to life in different habitats. Taxonomic revision of western Atlantic lutjanines appears warranted in that monotypic Ocyurus and Rhomboplites should be subsumed within the genus Lutjanus. Finally, it appears that retail mislabelling of ‘red snapper’ in commercial markets extends beyond the USA. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 102 , 915–929.     

A New Species of the Genus Paravelia Breddin 1898 from Argentina (Heteroptera: Veliidae)

A new species of the genus Paravelia (Heteroptera: Veliidae) is described, increasing the number of species of the genus known from Argentina to three: P. platensis Berg 1883, P. paxila Drake 1957, and the new sp. P. correntina. Some ecological and statistical notes are included. Scanning electron micrographs and illustrations are provided.     

A review of the bloodsucking midges of Trinidad and Tobago,West Indies (Diptera:Ceratopogonidae)*

Data are presented recording the presence of 49 species of bloodsucking cerato-pogonids in Trinidad, West Indies. Of these, 45 are Culicoides, one is a Leptoconops, and three belong to Forcipomyia (Lasiohelea). Five species are reported from Tobago: three Culicoides, one Leptoconops, and one Lasiohelea. The males of Culicoides benarrochi and C. fluviatilis are described for the first time, and the female of C. debilipalpis is redescribed. Culicoides filariferus and C. pseudodiabolicus are resurrected from synonymy, and characters are presented distinguishing them from C. diabolicus and C. guttatus. Biological data and keys to genera and species are included.     

Molecular differentiation of Keratinomyces (Trichophyton) species

The taxonomy of the form-genus Keratinomyces (Trichophyton) within the group of the dermatophytes is based on morphological features which remain insufficient for the distinction of these anamorphic species. The three species included in the genus Keratinomyces, namely K. ajelloi, K. ceretanicus and K. longifusus were examined by means of their mitochondrial-like DNA diversity and compared to few other dermatophytes. The analysis of the mtDNA restriction fragments confirmed that the three species are different and well separate from the other dermatophytes.     

Dictyostelids from Mediterranean forests of the south of Europe

The first results of a study of dictyostelid diversity in soils of Mediterranean vegetation are presented. Surface soil samples were collected during 2003–2004 from different Mediterranean forests in Spain and Portugal and were plated out for cellular slime moulds. Isolated during this study were 14 species of dictyostelids. One species, Dictyostelium firmibasis is reported for the first time from Europe, and nine (Dictyostelium aureo-stipes, Dictyostelium sp. 1, Dictyostelium fasciculatum, Dictyostelium giganteum, Dictyostelium implicatum, Dictyostelium leptosomum, Dictyostelium sphaerocephalum, Polysphondylium candidum, Polysphondylium pallidum) are new records for the Mediterranean region. Members of the three genera Dictyostelium (ten species), Polysphondylium (three species) and Acytostelium (one species) are present in this region of the world. Comments on their diversity and distribution are included.     

Trichaptum (Basidiomycota, Hymenochaetales) from China with a description of three new species

Trichaptum imbricatum, T. perenne and T. podocarpi are three new species from China. They are described, illustrated and compared in this paper with similar species. Trichaptum imbricatum is unique in its imbricate basidiocarps, white to cream hymenophores, small and regular pores, and scattered and thin-walled cystidia. Trichaptum perenne differs from other species in the genus in its perennial and pileate habit, its large pores and entire dissepiments, and oblong, ellipsoid basidiospores. Trichaptum podocarpi is distinguished in having totally resupinate basidiocarps, distinctly long cystidia, and in its habitat on Podocarpus. A key to species of Trichaptum occurring in China is provided; statistical variations of spore dimensions for each species are included in the key.     

Notes on British Boleti: II.

Summary

A key to the species of the genus Boletus sensu stricto based on habitat, microscopic and macroscopic characters is proposed. Three extra-limital species, as yet unrecorded from the British Isles, B. torosus, B. lupinus Krombh. and B. lupinus s. Bres., are included in the key in the hope that they may appear in future. They may have been overlooked previously or confused with far commoner forms, especially B. luridus, to which many quite distinct species have previously been referred. Also included in the key are three boletes not considered taxonomically to belong to this genus in its strict sense, although in some ways they are superficially similar. The only West European species of Tylopilus is keyed out and its taxonomic position considered. Boletus rubellus Krombh. placed by some American authors in Boletus sensu stricto is also discussed.     

A molecular investigation of the genus Ecklonia (Phaeophyceae,Laminariales) with special focus on the Southern Hemisphere

Brown algae of the order Laminariales, commonly referred to as kelps, are the largest and most productive primary producers in the coastal inshore environment. The genus Ecklonia (Lessoniaceae, Phaeophyceae) consists of seven species with four species in the Northern Hemisphere and three in the Southern Hemisphere. It was recently transferred to the family Lessoniaceae based on phylogenetic analyses of nuclear and chloroplastic markers, though the type of the genus was not included and its relationship with allied genera Eckloniopsis and Eisenia remained unresolved. The present study is the first to produce a phylogeny focussed on the genus Ecklonia. It included sequences from nuclear, mitochondrial, and chloroplastic DNA, for most of the distribution range of the three current Southern Hemisphere species (Ecklonia radiata, Ecklonia maxima, and a sample of a putative Ecklonia brevipes specimen), sequences for East Asiatic species (Ecklonia cava, Ecklonia kurome, and Ecklonia stolonifera), as well as the closely related genera Eckloniopsis and Eisenia. Results confirmed E. radiata and E. maxima as two distinct species in South Africa, E. radiata as a single species throughout the Southern Hemisphere (in South Africa, Australia, and New Zealand) and East Asiatic species as a distinct lineage from the Southern Hemisphere clade. Results further pointed out a close sister relationship between Eckloniopsis radicosa and two Eisenia species (including the type species: Eisenia arborea) to the genus Ecklonia suggesting that the genera Eckloniopsis and Eisenia are superfluous.     

An up-date of Verster's (1969) `Taxonomic revision of the genus Taenia Linnaeus' (Cestoda) in table format

The paper `A taxonomic revision of the genus Taenia Linnaeus, 1758 s. str.' (Verster, 1969) gives concise characterisations, together with drawings of rostellar hooks and the terminal genital organs, of the 32 Taenia species and three subspecies which this author found to be valid. Yet, it is hardly possible to quickly identify a questionable species or to readily access information on their hosts, geographical range and synonyms. The present paper compiles these data and additional information on larval characteristics into tables. Measurements and numbers of hooks are shown using a graph. Additional data are included from authors not mentioned by Verster and for seven new species (T. dinniki, T. jaipurensis, T. kotlani, T. madoquae, T. saigoni and T. simbae), two re-validated species (T. krepkogorski, T. retracta) and two subspecies (T. polyacantha arctica and T. saginata asiatica) described since 1969. Reasons for rejecting one new species and one new subspecies are given. A table of definitive hosts and the Taenia species occurring in them is also included, as is one of synonyms from 1850 onwards. A good procedure for the staining and mounting of cestodes is described.     

Phylogenetic systematics of the gondwanan Empis macrorrhyncha group (Diptera,Empididae, Empidinae)

The Empis macrorrhyncha group (Diptera: Empididae) from cool to warm temperate areas of South America and Australia is diagnosed and cladistically analysed, and five new species, Empis animosa sp.n. , E. austera sp.n. , E. maculosa sp.n. , E. occidentalis sp.n. and E. pedivillosula sp.n. , are described. Cladistic analysis of 23 adult morphological characters for 14 species of the group generated a single tree of 28 steps (CI = 0.82; RI = 0.93). Monophyly was established on the basis of a single apomorphy, possession of a bilobed cercus of the male hypopygium. Three main clades were inferred: clade 1 included three Patagonian and a single southwestern Australian species; clade 2 included two species from southeastern Australia; clade 3 included a large Patagonian group of five species and a single southeastern Australian species. The E. fulvicollis complex (clade 1) is a sister‐group of the E. macrorrhyncha complex (clades 2 + 3). A provisional historical biogeographic hypothesis is advanced correlating the appearance of the South American and Australian sister lineages with the timing of the break‐up of Gondwana.     

Evidence that a secondary metabolic biosynthetic gene cluster has grown by gene relocation during evolution of the filamentous fungus Fusarium

Trichothecenes are terpene‐derived secondary metabolites produced by multiple genera of filamentous fungi, including many plant pathogenic species of Fusarium. These metabolites are of interest because they are toxic to animals and plants and can contribute to pathogenesis of Fusarium on some crop species. Fusarium graminearum and F. sporotrichioides have trichothecene biosynthetic genes (TRI) at three loci: a 12‐gene TRI cluster and two smaller TRI loci that consist of one or two genes. Here, comparisons of additional Fusarium species have provided evidence that TRI loci have a complex evolutionary history that has included loss, non‐functionalization and rearrangement of genes as well as trans‐species polymorphism. The results also indicate that the TRI cluster has expanded in some species by relocation of two genes into it from the smaller loci. Thus, evolutionary forces have driven consolidation of TRI genes into fewer loci in some fusaria but have maintained three distinct TRI loci in others.     

MORPHOMETRIC ANALYSIS OF POLLEN FROM FOUR SPECIES OF AMBROSIA (COMPOSITAE)

A morphometric approach proved useful for characterizing pollen from the Ambrosia species that are responsible for most ragweed hayfever and for correctly identifying individual pollen grains. Pollen was harvested from 4 species (A. trifida, A. artemisiifolia, A. bidentata, A. psilostachya) grown in Champaign County, Illinois, and observed with a scanning electron microscope. Quantitative measurements of 6 different exine characters were made on micrographs of 96 pollen grains from each species. Discriminant analysis based on these characters was used to obtain a population centroid for each species and indicated that these centroids were distinctly different. This analysis also included a species classification for individual pollen grains and indicated probability of species membership. About 86% of all individuals were correctly classified when the 4 species were included, with a range from 80% (A. artemisiifolia) to 95% (A. psilostachya). When three species (A. trifida, A. artemisiifolia, A. bidentata) were analyzed, about 87% of the individuals were correctly classified, and almost all individuals (97%) were classified correctly when only A. trifida and A. artemisiifolia were included. The validity of the derived discriminant functions was also tested by treating herbarium specimens as unknowns. The species and percentages of these individuals correctly classified were A. trifida (100%), A. artemisiifolia (58%), A. bidentata (100%), and A. psilostachya (31%). The classification results using three species were A. trifida (100%), A. artemisiifolia (75%), and A. bidentata (100%); and using two species were A. trifida (100%) and A. artemisiifolia (92%). Hence, the disciminant functions do seem valid for 3 species, but further investigation of A. psilostachya is needed. This type of approach may be useful in pollen analysis, especially where these species significantly contributed to aeroallergens.     

Indo-Pacific Syllidae (Annelida,Phyllodocida) share an evolutionary history

The geographic distribution of three intriguing genera of Syllidae (Annelida, Phyllodocida), Alcyonosyllis, Paraopisthosyllis and Megasyllis, is restricted to the Pacific Ocean, Indian Ocean and the Red Sea. In this study new material of several species in all three genera is identified, and the distributions of the species and genera refined; four species of Alcyonosyllis were found to have increased ranges. Additionally, one new species of Paraopisthosyllis is described. Paraopisthosyllis pardus sp. nov. is characterized by having long bidentate bladed-chaetae, segments covered by small papillae, and a colour pattern consisting in dark red-brown antennae and dorsal cirri and several transversal dark red-brown lines per segment. The three genera share several striking morphological characteristics, such as alternation in the arrangement of dorsal cirri, wide segments with secondary annuli and bright, contrasting colour patterns. Alcyonosyllis species are found in association with other organisms, most noticeably anthozoans, whereas members of Paraopisthosyllis and Megasyllis are free living. Molecular information (sequences of DNA) from Alcyonosyllis species (including the type species, A. phili), and the type of Megasyllis (M. corruscans) is included herein for the first time in a phylogenetic analysis. A phylogenetic analysis performed through different methods (Maximum parsimony and Maximum likelihood) using sequences of three genes (18S, 16S and COI) reveals that all the three genera form a monophyletic group within Syllidae, with several synapomorphies, and a common ancestor probably from the Indo-Pacific. Their geographic distribution pattern, the relationships between these genera and the rest of syllids, and the symbiosis in Alcyonosyllis are discussed.     

Scaling body mass and use of space in three species of marsupials in the Atlantic Forest of Brazil

Abstract Body mass is considered a major determinant of home range size, but usually at a large scale of body mass variation. The exact scale where body size becomes more important than particular adaptations of each species is not clear, and uncertainty in the estimate of home range size is a possible cause of weak intraspecific scaling. We determine the scaling to body mass of two alternative movement measurements, daily home range (DHR) and its intensity of use (IU), in three species of didelphid marsupials, Didelphis aurita, Philander frenatus, and Metachirus nudicaudatus (Didelphimorphia, Didelphidae). The expected scaling exponents DHR ≈ M^0.5 and IU ≈ M^?0.25 were derived from the scaling to body mass of home range and daily movement distance. Animals were tracked in Serra dos Órgãos, Rio de Janeiro, Brazil, using a spool‐and‐line device. Individuals of the three species were compared combining intra and interspecific variation in a single analysis, with species, body mass, and thread tracked as covariates. The model best supported included only body mass as the independent variable, with DHR ≈ M^0.435 and IU ≈ M^?0.218, close to the expected values. The second best supported model included species identity, but with a non‐significant effect. It was surprising that body mass was more important than species identity in a comparison involving only three species, and considering the morphological and locomotory adaptations of the three species. Body mass may become more important than species identity when the scale of variation approaches one order of magnitude.     

The <Emphasis Type="Italic">Corydalis nana</Emphasis> complex (Fumariaceae sect. Latiflorae) in Western Himalaya

Corydalis nana Royle in the western Himalaya is found to be a complex of three species, including two hitherto undescribed. The true C. nana is a yellow-flowered species. The most common, greyish-blue or white-flowered species in the Sino-Indo-Nepal Himalaya, hitherto mistaken as C. nana, is a new species described here as Corydalis magni. An additional related species, Corydalis devendrae, characterised by tuberous roots and dorsally wingless/non crestate upper and lower petals is also described and illustrated from Uttarakhand state, India. A table comparing diagnostic characters, along with keys to taxa of the complex and a distribution map, are also included.     

REVISION OF CHINESE SPECIES OF HEMIPTARSENUS WESTWOOD (HYMENOPTERA: EULOPHIDAE) *

Abstract This paper deals with Chinese species of Hemiptarsenus Westwood, 1833. Totally five species are found in China. Among them, H. unguicellus (Zetterstedt), H. ornatus (Nees) and H. varicornis (Gi‐rault) were previously recorded, H. zilahisebessi Erdös is newly recorded in China and H. strigiscuta sp. n. is described as new. A tentative key to known species is given, and other three external species, H. fulvicollis Westwood, H. wailesellae Nowicky and H. waterhousii Westwood, are included in the key for comparison. The type specimen is deposited in the Zoological Museum, Institute of Zoology, Chinese Academy of Sciences.     

Community structure of a species-rich temperate forest,Ogawa Forest Reserve,central Japan

Species assembly and niche differentiation were studied, and future species composition was predicted by simple Markov models, in an old-growth deciduous forest at the Ogawa Forest Reserve in central Japan. The dominant species in our 6ha study site are Quercus serrata, Fagus japonica, and F. crenata.An ordination by population parameters revealed four different combination 3 of life forms and regeneration niches. Cluster analysis based on interspecific spatial correlation revealed three groups of species. The species in cluster A, such as F. japonica, occurred at the bottom of the valley, while those in cluster B, such as Q. serrata, occurred along ridges. Species in cluster C, such as F. crenata, did not show any particular habitat preference. Clusters B and C were further divided into three smaller clusters (a-c). Both clusters Ba and Bb included shade intolerant species. Species in cluster Ba had large clump sizes (>1500 m²), reflecting regeneration following large-scale disturbances. Species in cluster Bb had smaller clump sizes (<400 m²) reflecting regeneration following local disturbances. Clusters Ca and Cb mainly included shade tolerant species and shade intolerant species, respectively. Markov models predicted that shade intolerant species, particularly those in cluster Ba, would be eliminated. Thus, species coexist by differentiation of both habitats and regeneration niche in this forest community. Some species such as Quercus serrata, however, regenerate following large-scale disturbances or human activity.