Genome turnover in great millet and related millets (Poaceae)

Based on optical reassociation studies of total nuclear DNAs at 55°C, 62°C, 69°C, and 75°C, it is concluded that repeat families in great millet, little millet, barn yard millet and finger millet are heterogeneous while those of fox tail millet are homogeneous. In great millet, almost one third of the sequences that behave as single copy at standard conditions are actually fossil repeats. Such fossil repeats are not a prominent feature of the genomes of the other four millets. The ratios of sequence complexities of repeats isolated at 75°C to those isolated at 55°C are 2.2, 3.5, 81, and 0.3 in case of little millet, finger millet, fox tail millet, and great millet respectively. On the basis of the above three observations, it is suggested that among these millets, the rate of turnover of the genome of fox tail millet is the slowest while that of great millet is the fastest. Such comparative estimates of differences in the turnover rates of genomes of related species are expected to generate useful data about the evolution of genomes.     

Chloroplast DNA variation in the genusSecale (Poaceae)

The chloroplast genomes of 44 accessions ofSecale were surveyed for restriction site polymorphisms. The accessions were chosen to represent the geographic as well as taxonomic range of the genus. Using 12 restriction enzymes a total of 348 sites were detected. Twenty-nine mutation sites were phylogenetically informative and used in a cladistic analysis. Further, a 0.1 kb insertion separatedSecale from the outgroup species. Only the annual speciesS. sylvestre was distinct from the rest of the taxa. Cultivated rye together with both wild annual and wild perennial accessions were mixed among each other. Sequence divergence (p) among taxa ofSecale was low, varying from 0.000 to 0.005, suggesting a rather recent origin of the genus.     

Variation in flowering behaviour inVulpia (Poaceae)

Some abnormalities in the androecial structure and behaviour withinVulpia sect.Vulpia are described. These features help to trace the evolutionary history of cleistogamous taxa with a single micranthous stamen from chasmogamous taxa with three macranthous stamens.     

Morphological variation inLolium (Poaceae) as a measure of species relationships

Analysis of morphological and phenological data for determining the genetic variation within sevenLolium species led to the recognition of two groups within this genus. One group, containing the two inbreeding speciesL. temulentum andL. persicum, was clearly distinct from all other species. Strong morphological and phenological intergradation was found between both species. The cross-breeding species,L. perenne, L. rigidum, andL. multiflorum, formed another group. Little differentiation was found between these species, though they were distinct. Two inbreeding species,L. loliaceum andL. remotum, were clearly distinct from each other and the two groups.L. loliaceum had an isolated position and was most related toL. rigidum. L. remotum had an intermediate position between the cross-breeding and inbreeding species, and was almost equally distant from all three cross-breeding species.Genetic variation inLolium spp. I.     

Sieve-element plastids ofTriticum andAegilops (Poaceae)

Fourteen taxa of the Triticum-Aegilops group have been investigated for their sieve-element plastids. At maturity they contain dense and thin crystalloid inclusions and are classified into the PIIc' plastid type; onlyAe. comosa var.biaristata lacked the thin crystalloids and thus conforms to the PII c type. The proteinaceous nature of the crystalloids was demonstrated by application of proteolytic enzymes. Ultrastructural evidence suggests that both kinds of crystalloid inclusions are involved in the sealing of sieve-plate pores of injured sieve tubes. Measurements and calculations of the spacings and angles carried out on crystalloid prints permitted the construction of a two- and three-dimensional pattern forT. aestivum thin crystalloids.     

Allozyme variation within and between populations inLolium (Poaceae)

Isozyme analysis was used to determine genetic variation within and between populations of sevenLolium species. All populations from the inbreeding species (L. temulentum, L. remotum, L. loliaceum, andL. persicum) were completely fixed for all enzymes scored. They also contained, for four of the five enzyme systems studied, exactly the same allelic variant. The three cross-breeding species showed large within-population variation and much less between-population variation. The great similarity of the allozymic variants found in all species, made the division of the genusLolium into species on basis of allozymic data difficult. It was not possible to separate the different inbreeding species from each other. Within the cross-breeding groupL. multiflorum andL. rigidum could be distinguished fromL. perenne. L. multiflorum, andL. rigidum could, with more difficulty, also be separated from each other. Allelic variation could have more relation with the provenance of the populations than with taxonomic classification.Genetic variation inLolium spp. II. For first part see Pl. Syst. Evol. 188: 87–99.     

Cytotaxonomy and karyotype evolution inPhleum sect.Phleum (Poaceae) in Poland

Three taxa are distinguished in the sectionPhleum Griseb. in Poland:P. nodosum (2n = 14),P. pratense (2n = 42), and the third one unformally named hereP. commutatum (2n = 14). It corresponds morphologically toP. commutatum Gaud. reported as a tetraploid taxon (2n = 28) from other geographic regions. Giemsa C-banded karyotypes of these three taxa help clarify the taxonomic status ofP. commutatum and the origin of the hexaploidP. pratense. It is suggested that changes in the amount of telomeric heterochromatin played an important role in the evolution ofPhleum karyotypes.     

Gene flow inAgrostis tenuis (Poaceae)

The copper tolerance of both adult plants and their seedlings, ofAgrostis tenuis from sites within and outside, but neighbouring the Parys Mountain mine (North Wales) were studied. Intensive sampling was carried out along a line starting from the mine boundaries to a distance of five miles away in the direction of the prevailing wind, and of two miles in an upwind direction. The test have shown that mine populations are very tolerant. In outside populations on soils with reduced of very low copper content the mean tolerance level of the seedlings is considerably higher than that of corresponding adult plants, while both show a gradual decrease in tolerance with distance from the mine. The gene flow moves in the direction of the prevailing wind transfering tolerant characters from the mine to the normal populations. The selective pressures on the toxic soil of the mine are quite strong and permit ± tolerant plants only, while on normal soils these pressures are not so severe, so that populations may be rather heterogenous regarding their tolerance towards copper.     

Interspecific hybridization in natural populations ofCyrtandra (Gesneriaceae) on the Hawaiian Islands: Evidence from RAPD markers

Interspecific hybridization among Hawaiian species ofCyrtandra (Gesneriaceae) was investigated using randomly amplified polymorphic DNA (RAPD) markers. Thirty-three different primers were used to investigate interspecific hybridization for 17 different putative hybrids based on morphological intermediacy and sympatry with putative parental species. RAPD data provided evidence for the hybrid origin of all putative hybrid taxa examined in this analysis. However, the patterns in the hybrid taxa were not found to be completely additive of the patterns found in the parental species. Markers missing in the hybrid taxa can be attributed to polymorphism in the populations of the parental species and the dominant nature of inheritance for RAPD markers. Unique markers found within hybrid taxa require further explanation but do not necessarily indicate that the taxa are not of hybrid origin. The implications suggest that these interspecific hybridization events had, and continue to have, an effect on the adaptive radiation and conservation biology ofCyrtandra.     

The intergeneric hybrid origin ofPoa labradorica (Poaceae)

Phytogeographic, ecological, morphological, anatomical, cytological, isozyme, and endonuclease restriction site evidence is presented demonstrating thatPoa labradorica is of intergeneric hybrid origin betweenDupontia fisheri subsp.psilosantha (pistillate parent) andPoa eminens (staminate parent).Poa labradorica is endemic to recently deglaciated areas of northern Quebec and Labrador which are within the overlapping range of the putative parents. Incapable of sexual reproduction,P. labradorica dominates large areas of coastal marsh through vigorous production of rhizomes. Most morphological, anatomical, cytological, isozyme, and DNA characters studied inP. labradorica showed states intermediate or additive to those of the putative parents.     

CHy-banding patterns and chromatin organization inAegilops andTriticum species (Poaceae)

The distribution of CHy-banded heterochromatin was studied in the chromosomes ofAegilops longissima, Ae. speltoides, Triticum monococcum, andT. turgidum. Interphase nuclei were measured after Feulgen staining at different thresholds of optical density; the curves so obtained indicated the relationship among the species with respect to the different fractions of the genomic DNA. The karyological and cytophotometric analyses indicate differences betweenAe. speltoides andAe. longissima, the latter species being enriched in heterochromatin. Similar results were demonstrated for the genusTriticum, in whichT. turgidum showed more heterochromatin when compared withT. monococcum. The results suggest that the B genome of the cultivated wheats possesses a type of heterochromatin that resembles the type present inAe. longissima.     

Esterase isozyme variation in theEragrostis curvula complex (Poaceae)

The biosystematic relationships of the apomictic complexEragrostis curvula s. lato, is investigated by disc electrophoresis of seed extracts to obtain esterase patterns of 23 accessions representing the morphological variants of this complex: curvula, conferta, robusta, chloromelas and lehmanniana. The zymograms thus obtained were classified into four groups on the basis of the presence of certain bands taken as characteristic and constant markers. Within each group variations were found in strict accordance with the morphological and cytogenetic data available on the complex. Cluster analysis showed similarity levels between the strains studied, representing different genomic groups. The esterase pattern proved useful as an additional criterion for identifying the individual taxa making up the complex and for evaluating their reciprocal relationships.     

Identification of sex in Simmondsia chinensis (Jojoba) using RAPD markers

Simmondsia chinensis (Link) Schneider, a multipurpose dioecious shrub of arid zones, has emerged as a cash crop. It is being cultivated for its seeds which store liquid wax whose properties are similar to spermaceti (Sperm whale oil), a substitute for petro products and precious high-priced lubricants. Jojoba is a slow-growing desert shrub having a male biased (5:1; male:female ratio) population. Since there is no method available to determine the sex at the seedling stage, current investigations have been carried out to generate a sex-specific random amplified polymorphic DNA (RAPD) marker in jojoba which is based on the PCR amplification of random locations in the genome of plant. Of the 72 primers tested, only one random decamer primer, OPG-5, produced a unique ∼1,400 base pairs fragment in male DNA. To validate this observation, this primer was re-tested with the individuals of male and female samples of four cultivars. The unique ∼1,400 bp fragment was present in male individuals of all the four cultivars and completely absent in respective female individuals tested. To the best of our knowledge, this is the first report to ascertain the sex of jojoba plants at an early stage of development of the taxon.     

Subgroups in theHordeum patagonicum complex (Poaceae)

Seeds of theHordeum patagonicum complex were collected from the field and grown in the greenhouse. The aim was to take a sample of members of the complex, and on the basis of the phenotypic similarities in some morphological and physiological characters, determine whether distinct groups exist. When cluster analyses, to generate hypotheses, and orthodox statistical procedures, for hypotheses obtained a priori, were applied to the reproductive morphology, germination and flowering patterns, onlyH. patagonicum subsp.magellanicum, out of the five recognized taxa, could be distinguished consistently. The remaining four taxa, which overlapped considerably, could be re-formed into three groups whose centroids were different but whose ranges of variation were not distinct from each other. We conclude that the highly cross-compatible members of theH. patagonicum complex, first defined as species and later redefined as subspecies are probably no more than biotypes.     

Evolution and systematic relationships in theTriticeae (Poaceae)

The evolution and taxonomic relationships in theTriticeae are discussed with the view to highlight aspects of this agronomically important group of plants, which may be of interest to molecular biology. Some of these aspects are addressed in more detail in adjoining papers in which specific genomic loci have been examined at the DNA sequence or isozyme level. Aspects discussed include the systematics and geographic distribution of theTriticeae species, isozyme and chromosome pairing studies on some of the species as well as more recent developments in DNA analyses. A survey of the systematics of theTriticeae indicated that the genomic system ofLöve is probably the most useful starting point for interpreting molecular data even though the system has many problems from a taxonomic point of view. The geographical distribution ofTriticeae species, using both published and unpublished data, suggested that information of this type taken together with the theory of continental drift provides a broad time-span for considering data from DNA sequence studies. The significance, and modes of analyses, of isozyme studies were assessed because they often provide valuable characters in determining relationships between species. The main character underlyingLöve's andDewey's analyses of theTriticeae, namely chromosome pairing, is discussed with particular reference to isozyme studies to show that in some cases, such as species ofHordeum sensu lato, consistent relationships are obtained. Finally, new developments in understanding chromosome structure are considered in relation to the above variables in the taxonomy and evolution of theTriticeae.     

Genetic variation in two sympatric European populations of Bosmina spp. (Cladocera) tested with RAPD markers

We used RAPDs (Random Amplified Polymorphic DNA) to test genetic divergence between two populations of Bosmina spp. in Lake Östersjön, Sweden. Previous taxonomic studies on European species within the genus Bosmina have been based on morphological characters alone. RAPD markers distinguished the two populations and supported the specific status of B. coregoni and B. longispina based on morphological characters. Furthermore, juveniles with a long antennule and a mucro were classified as B. coregoni. RAPDs also revealed genetic differences among the tested individuals, suggesting several clones within each species.     

Intraspecific chromosomal polymorphism ofTriticum araraticum (Poaceae) detected by C-banding technique

DifferentTriticum araraticum lines were studied by C-banding method. The intraspecific divergence ofT. araraticum was shown to be caused mainly by large chromosomal rearrangements. Two main chromosomal types were distinguished among the studied lines: (1) a karyotype similar to that ofT. timopheevii and (2) different one. The first type includes some lines ofT. araraticum subspp.kurdistanicum andararaticum; the second comprises most lines ofT. araraticum subsp.araraticum. The lines of the first type can give fertile F₁ hybrids withT. timopheevii.     

Genetic variations among mulberry genotypes (Morus alba) as revealed by Random Amplified Polymorphic DNA (RAPD) markers

Turkey is one of the most important mulberry fruit producers in the world. In particular, in Eastern and Inner part of Turkey, mulberry fruits are processed into several products such as `Mulberry Pekmez', `Mulberry Pestil', `Mulberry Kome' etc. Therefore, mulberry fruits give higher economic returns thus have greater employment potentials in Turkey. In order to improve the yield and fruit quality through breeding, the genetic variations and relationships among 15 selected white mulberry genotypes (Morus alba L.) were evaluated using Random Amplified Polymorphic DNA (RAPD). A total of 101 DNA markers were generated by 16 random primers, with an average of 6.3 easily detectable markers per primer. Several RAPD markers showed unique patterns of mean frequency that differed among the white mulberry genotypes. The distance matrix showed that the highest genetic distance (0.902) was between EMS13 and EMS8 and the least (0.413) was between EMS12 and EMS15. According to the results, RAPD analysis can be used for the characterization and grouping of mulberry genotypes. The genetically divergent genotypes identified from this study would be of much use in the future breeding program.     

Pollen diameter and fertility in nine species ofPuccinellia (Poaceae)

Diameter and fertility of pollen grains were surveyed in nine species ofPuccinelliaParl. (Poaceae), mainly from the Iberian Peninsula, allowing information about reproductive behaviour and biological characteristics of pollen of these taxa. Maximum diameter was measured with an image processor and fertility was evaluated by staining the grains with Müntzing's mixture. Significant differences in both characters were found between the taxa. In consequence, maximum diameter and fertility proved to have some taxonomic relevance inPuccinellia.     

Genome relationships in theElytrigia group of the genusAgropyron (Poaceae) as indicated by seed protein electrophoresis

Agropyron bessarabicum (2n = 14),A. rechingeri (2n = 28),A. junceiforme (2n = 28),A. elongatum (2n = 14),A. flaccidifolium (2n = 28) andA. scirpeum (2n = 28) were studied by isoelectric focusing of seed soluble proteins.—The protein profiles obtained from the six taxa showed a striking degree of similarity; typically they consist of 40 bands. No qualitative but only quantitative differences (in the intensity of some bands) were found.—Combined with the cytological information available these protein data indicate that the two polyploid complexes must be placed in the recently erected genusThinopyrum with the genome designations:T. bessarabicum J^j1 J^j1,T. sartorii (=A. rechingeri) J^j1 J^j1 J^j3 J^j3,T. junceiforme J^j1 J^j1 J^j2 J^j2,T. elongatum J^e1 J^e1,T. flaccidifolium J^e1 J^e1 J^e1 J^e1 andT. scirpeum J^e1 J^e1 J^e2 J^e2.