Seed viability and seed dormancy of non-native Phragmites australis in suburbanized and forested watersheds of the Chesapeake Bay, USA

The non-native, invasive haplotype of Phragmites australis is rapidly invading tidal and non-tidal wetlands across North America. Phragmites has the potential to spread by seeds and rhizomes. Seed viability and dormancy differences were quantified among 18 patches of non-native Phragmites in subestuarine wetlands in developed (i.e., suburbanized) vs. forested watersheds of the Chesapeake Bay. We used tetrazolium and germination assays to assess seed viability and compared germination percentages and rate of germination among fresh seeds, cold–moist treated seeds, and warm–dry treated seeds to evaluate seed dormancy. Seed viability was <1% in most patches but a few patches produced abundant viable seeds (5–21%). Seed viability, however, did not differ significantly between wetlands in forested vs. developed watersheds. Contrary to studies of Phragmites seed dormancy in European populations, some Phragmites seeds were dormant at maturity; cold–moist treated seeds germinated faster and to higher percentages than fresh seeds or warm–dry treated seeds.     

Stability of the spatio-temporal distribution and niche overlap in neotropical earthworm assemblages

The spatial distribution of soil invertebrates is aggregated with high-density patches alternating with low-density zones. A high degree of spatio-temporal organization generally exists with identified patches of specific species assemblages, in which species coexist according to assembly rules related to competitive mechanisms for spatial and trophic resources occur. However, these issues have seldom been addressed. The spatio-temporal structure of a native earthworm community in a natural savanna and a grass–legume pasture in the Colombian “Llanos” was studied during a 2-year-period. A spatially explicit sampling design (regular grid) was used to discern the distribution pattern of species assemblages in both systems. Earthworms were collected from small soil pits at three different sampling dates. Data collected from 1 m² soil monoliths were also used in the present study. Data were analyzed with the partial triadic analysis (PTA) and correlograms, while niche overlap was computed with the Pianka index. The PTA and correlogram analysis revealed that earthworm communities displayed a similar stable spatial structure in both systems during the 2-year study period. An alternation of population patches where different species' assemblages dominated was common to all sampling dates. The medium-sized Andiodrilus sp. and Glossodrilus sp. exhibited a clear spatial opposition in natural savanna and the grass–legume pasture for the duration of the study. The Pianka index showed a high degree of niche overlapping in several dimensions (vertical distribution, seasonality of population density) between both species. The inclusion of space-time data analysis tools as the PTA and the use of classical ecological indices (Pianka) in soil ecology studies may improve our knowledge of earthworm assemblages' dynamics.     

Invasion Waves in Populations with Excitable Dynamics

Whilst the most obvious mechanism for a biological invasion is the occupation of a new territory as a result of direct ingress by individuals of the invading population, a more subtle “invasion” may occur without significant motion of invading individuals if the population dynamics in a predator prey scenario has an “excitable” character. Here, “excitable” means that a local equilibrium state, either of coexistence of predator and prey, or of prey only, may, when disturbed by a small perturbation, switch to a new, essentially invaded state. In an invasion of this type little spatial movement of individuals occurs, but a wave of rapid change of population level nevertheless travels through the invaded territory. In this article we summarise and review recent modelling research which shows that the macroscopic features of these invasion waves depend strongly on the detailed spatial dynamics of the predator–prey relationship; the models assume simple (linear) diffusion and pursuit-evasion, represented by (non-linear) cross-diffusion, as examples. In the context of plankton population dynamics, such waves may be produced by sudden injections of nutrient and consequent rapid increase in plankton populations, brought about, for example, by the upwelling caused by a passing atmospheric low pressure system.     

Home and Away: Comparisons of Resource Utilization by a Marine Species in Native and Invaded Habitats

The exotic Asian shore crab, Hemigrapsus sanguineus, was recently introduced to the northeastern coast of North America and during the 1990's breeding populations were established throughout southern New England. In 1997–1998, ecological studies of several co-occurring brachyuran crabs were conducted and in native (Tanabe Bay, Japan) and invaded (Long Island Sound, USA) habitats of H. sanguineus. Standardized comparisons of H. sanguineus were made between the 2 habitats using data on crab sizes, utilization of space, and food habits. Results revealed that (1) the resource use of H. sanguineus was quite different from that of other resident species in its invaded habitat, and (2) there were no substantial changes in resource utilization by H. sanguineus after it became established in the invaded habitat (relative to native Tanabe Bay). Differing patterns of resource use by H. sanguineus and other crabs in the invaded habitat, the lack of restriction in resource use by H. sanguineus following its introduction, and the climatological and physical similarities between native and invaded regions likely contributed to the successful invasion of H. sanguineus into rocky intertidal habitats in southern New England.     

Constrained C-terminal hexapeptide neurotensin analogues containing a 3-oxoindolizidine skeleton

Summary In order to enforce different spatial orientations in the C-terminal hexapeptide of neurotensin (NT_8–13) and to gain information about the importance of the 10–11 peptide bond for binding to NT receptors, the Pro¹⁰-Tyr¹¹ fragment has been replaced with (2R,8S,8aR)-, (2S,8S,8aR)-, (2S,8S,8aS)-, (2S,8R,8aS)- and (2R,8R,8aS)-8-amino-2-benzyl-3-oxoindolizidine-2-carboxylic acid. Molecular dynamics calculations and energy minimization studies have shown that, contrarily to the Pro-Tyr moiety, none of these indolizidines display a tendency to adopt type I and III -turns, but those having (8S,8aR) or (8R,8aS) stereochemistry essentially adopt extended conformations and the (8S,8aS) stereoisomer prefers a nonstandard folding. The four diastereomeric NT_8–13 analogues incorporating (8S,8aR) or (8R,8aS) indolizidines displayed binding affinities for the brain NT receptor similar to that of [Ala¹¹]-NT_8–13 and only five- to ninefold lower than that of the corresponding analogue, [Phe¹¹]NT_8–13. Although this slight decrease could be attributed to differences in conformational behavior between these constrained NT_8–13 analogues and [Phe¹¹]NT_8–13 or NT_8–13, it is not clear whether the -turn around Pro¹⁰-AA¹¹ (AA=Phe, Tyr) is conserved upon receptor binding. An excessive restriction in the motions of the aromatic side chain, imposed by the highly steric constraint of the indolizidine moiety, emerges as an alternative explanation. The findings reported here demonstrate the possibility of replacing the Pro¹⁰-Tyr¹¹ dipeptide in NT_8–13 with a non-peptide residue without affecting considerably the affinity for brain NT receptors.     

The fragmented population structure of the Sardinian chalk hill blue butterfly (Lepidoptera, Lycaenidae)

The endemic Sardinian chalk hill blue butterfly, Polyommatus coridon gennargenti, is considered vulnerable to extinction because of its low genetic variation and restricted distribution. The species also has a fragmented distribution, which follows the patchy distribution pattern of its larval host-plant. A preliminary investigation of the population structure of P. coridon gennargenti was carried out on a small network of four local populations by means of capture–recapture methods. Estimated population sizes and movement rates among the four adjacent local populations suggest that this taxon has a metapopulation structure composed of loosely connected small local populations. Natural fragmentation, isolation, and traditional land use contribute to the vulnerability of P. coridon gennargenti to extinction. Low effective population sizes and restricted movement between habitat patches lead to inbreeding and an increased vulnerability to extinction of this island population.     

Seed production and seed predation in a patchy and time-varying environment. Dynamics of a milkweed — tephritid fly system

Summary Vincetoxicum hirundinaria is a longlived perennial herb. Its pod production was measured during seven years in about 40 small isolated patches in two study areas in southeastern Sweden. Total pod production in the two areas varied synchronously and up to about 200 times between years. This variation was mainly due to drought conditions as determined by the interplay of weather (sunshine h) and site characteristics.Populations of a univoltine tephritid fly, euphranta connexa, whose larva feeds on V. hirundinaria seeds in the maturing pods, were monitored for five and seven years in the two study areas respectively. Larval fly populations in the two areas varied 30 and 50-fold between years, with highs in years when pods were abundant and lows when pods were scarce. The percentage of pods attacked by E. connexa, however, varied in the opposite direction, with very high attack rates (about 100%) when pods were scarce and low rates (down to 10–20%) when pods were common. Thus the temporal tracking of food resources by E. connexa was poor, resulting in yearly variations in the amount of unattacked pods (and seeds) being about 2,00-fold.Many host plant patches were small and totally without pods in some years, causing frequent local extinctions of E. connexa. Patches were, however, readily colonized in later years when pods appeared again. Low overall attack rates in certain years were thus only to a minor extent explainable by host plant patches being uncolonized by the fly. The efficient spatial tracking of resources by the fly population allows this population system to be analyzed largely in terms of its temporal dynamics.Although E. connexa populations often exploit only a minor part of their potential larval resources, the rate of population change was closely correlated with these resources expressed on a per capita basis. Natural enemies only have negligible effects on E. connexa population trends. In this population system the herbivore (seed predator) population is thus controlled by its food resources, but weather-imposed temporal variations in resource set are too large for the herbivore population to closely track its resource base. This temporal tracking inertia has important implications for the long-term production of healthy seeds.     

Spatial distribution of bacterivorous nematodes in a Chinese Ecosystem Research Network (CERN) site

Geostatistics was applied to assess the spatial distribution of bacterivorous nematodes in a Chinese Ecosystem Research Network (CERN) site in northeast China. A 42×30 m plot was divided into grids with 7×5 m spacing that included 49 sampling points. Soil samples were collected from depths of 0–10 cm and 10–20 cm. The results showed that Cephalobus and Panagrolaimus were the most dominant bacterivores, which together represented 74 and 82% of total bacterivorous nematodes on average at depths of 0–10 cm and 10–20 cm, respectively. Within-site variability was high for these nematode genera. Geostatistical analysis indicated that a major part of this variability was spatially dependent; variograms suggest that 55–100% of sample population variance was related to spatial autocorrelation over ranges of 9–91 m. The mean numbers of total bacterivores and Panagrolaimus populations were higher at 0–10 cm depth than at 10–20 cm depth. Between the two depths, different distribution patterns were found for Panagrolaimus, whereas similar patterns were found for Cephalobus. The maps obtained by kriging well illustrated horizontal distribution patterns of bacterivorous nematodes at two depths at field scale.     

Multiple spatial-scale resource selection function models in relation to human disturbance for moose in northeastern China

The moose (Alces alces cameloides) population in northeastern China is on the southernmost edge of its distribution in Asia. A survey was conducted to determine moose resource selection and the effects of human disturbance on moose in a study area of 20,661 ha located on the northwestern slope of the Lesser Khingan Mountains, located in northeastern China. Predictive models of resource selection were developed using logistic and autologistic regression. All models considered resource variable selection at two spatial scales, patch and landscape. At the patch scale, moose preferred larger birch (Betula platyphylla) patches, but avoided larger tamarack (Larix gmelinii) patches. At the landscape scale, moose preferred higher densities of tamarack patches, i.e., heterogeneity of tamarack stands, selected areas with more abundant annual shoots, terrain conducive to better concealment, higher altitudes and areas saturated with soil moisture. Roads and forest harvest intervals were identified as important human disturbance factors. This is the first time that moose have been reported to avoid roads, and the avoidance distance was nearly 3 km. We believe that in this region moose under the influence of roads are behaviorally plastic, compared with the indifference of moose to the presence of roads in other regions. Moose avoided forest areas logged more than 3 years previously and preferred areas logged 1–2 years previously. In addition, it may be necessary to monitor the effect of the dynamic of density of roe deer on the spatial distribution of the moose population.     

Seasonal changes in the contribution of root respiration to total soil respiration in a cool-temperate deciduous forest

A trenching method was used to determine the contribution of root respiration to soil respiration. Soil respiration rates in a trenched plot (R _trench) and in a control plot (R _control) were measured from May 2000 to September 2001 by using an open-flow gas exchange system with an infrared gas analyser. The decomposition rate of dead roots (R _D) was estimated by using a root-bag method to correct the soil respiration measured from the trenched plots for the additional decaying root biomass. The soil respiration rates in the control plot increased from May (240–320 mg CO₂ m^–2 h^–1) to August (840–1150 mg CO₂ m^–2 h^–1) and then decreased during autumn (200–650 mg CO₂ m^–2 h^–1). The soil respiration rates in the trenched plot showed a similar pattern of seasonal change, but the rates were lower than in the control plot except during the 2 months following the trenching. Root respiration rate (R _r) and heterotrophic respiration rate (R _h) were estimated from R _control, R _trench, and R _D. We estimated that the contribution of R _r to total soil respiration in the growing season ranged from 27 to 71%. There was a significant relationship between R _h and soil temperature, whereas R _r had no significant correlation with soil temperature. The results suggest that the factors controlling the seasonal change of respiration differ between the two components of soil respiration, R _r and R _h.     

Resource partitioning by three species of hemipteran herbivores on the basis of host plant density

Summary Three hemipteran herbivores partition a common resource plant, Senecio smallii, on the basis of bud density and plant patch size. The monophagous herbivore, Neacoryphus bicrucis, is most abundant in larger patches where bud density is greatest. The oligophagous herbivore, Harmostes reflexulus, is most abundant in small patches of high bud density. The polyphagous species, Lygus pratensis, is most abundant in small patches where abundance is independent of bud density. The aggressive nature of the monophagous herbivore appears to mediate the responses of the other species.     

Neighbourhood interactions and environmental factors influencing old‐pasture succession in the Central Pyrenees

Abstract. The shrub Buxus sempervirens and the trees Abies alba and Fagus sylvatica have recently recolonized old‐pastures in the Central Pyrenees. We mapped all live and dead individuals (> 1.3 m tall) in a large forest plot in Ordesa Valley to examine the importance of density‐dependent processes during recolonization. Biotic interactions were inferred from changes in horizontal structure and the influences of neighbours on tree survival. Buxus differentially influenced establishment and survival of tree species, thereby controlling future canopy composition and spatial structure. The rapidly invading Abies formed denser patches on elevated sites less occupied by Buxus, whereas Fagus preferentially established within shrubs. Abies reached densities which led to intense intraspecific competition and high mortality rates among saplings. Self‐thinning in Abies led to smaller numbers of regularly spaced survivors, and greater relative dominance of Fagus. Disregarding intraspecific effects and abiotic environment, Abies survival was significantly lower under Buxus shrubs, which suggests that the spatial location and abundance of Abies was constrained by the location of Buxus. Fagus survival was not related to Buxus density, but remained significantly lower in denser Abies patches. The higher mortality of Fagus in denser Abies patches, and the resulting spatial segregation of the species, reflects asymmetric interspecific competition. Inhibition from Buxus shrubs and intraspecific competition prevent invading Abies from dominating and may therefore help in maintaining a mixed Abies‐Fagus stand.     

Its all about connections: hubs and invasion in habitat networks

During the early stages of invasion, the interaction between the features of the invaded landscape, notably its spatial structure, and the internal dynamics of an introduced population has a crucial impact on establishment and spread. By approximating introduction areas as networks of patches linked by dispersal, we characterised their spatial structure with specific metrics and tested their impact on two essential steps of the invasion process: establishment and spread. By combining simulations with experimental introductions of Trichogramma chilonis (Hymenoptera: Trichogrammatidae) in artificial laboratory microcosms, we demonstrated that spread was hindered by clusters and accelerated by hubs but was also affected by small‐population mechanisms prevalent for invasions, such as Allee effects. Establishment was also affected by demographic mechanisms, in interaction with network metrics. These results highlight the importance of considering the demography of invaders as well as the structure of the invaded area to predict the outcome of invasions.     

Remnants fragments preserve genetic diversity of the old forest lichen <Emphasis Type="Italic">Lobaria pulmonaria</Emphasis> in a fragmented Mediterranean mountain forest

Fragmentation represents a serious threat to biodiversity worldwide, however its effects on epiphytic organisms is still poorly understood. We study the effect of habitat fragmentation on the genetic population structure and diversity of the red-listed epiphytic lichen, Lobaria pulmonaria, in a Mediterranean forest landscape. We tested the relative importance of forest patch quality, matrix surrounding fragments and connectivity on the genetic variation within populations and the differentiation among them. A total of 855 thalli were sampled in 44 plots (400 m²) of 31 suitable forest fragments (beeches and oaks), in the Sierra de Ayllón in central Spain. Variables related to landscape attributes of the remnant forest patches such as size and connectivity and also the nature of the matrix or tree species had no significant effects on the genetic diversity of L. pulmonaria. Values of genetic diversity (Nei’s) were only affected by habitat quality estimated as the age patches. Most of the variation (76%) in all populations was observed at the smallest sampled unit (plots). Using multiple regression analysis, we found that habitat quality is more important in explaining the genetic structure of the L. pulmonaria populations than spatial distance. The relatively high level of genetic diversity of the species in old forest patches regardless of patch size indicates that habitat quality in a highly structured forest stand determines the population size and distribution pattern of this species and its associated lichen community. Thus, conservation programmes of Mediterranean mountain forests have to prioritize area and habitat quality of old forest patches.     

Landscape genetics of an endangered lemur (Propithecus tattersalli) within its entire fragmented range

Habitat fragmentation may strongly reduce individuals’ dispersal among resource patches and hence influence population distribution and persistence. We studied the impact of landscape heterogeneity on the dispersal of the golden‐crowned sifaka (Propithecus tattersalli), an endangered social lemur species living in a restricted and highly fragmented landscape. We combined spatial analysis and population genetics methods to describe population units and identify the environmental factors which best predict the rates and patterns of genetic differentiation within and between populations. We used non‐invasive methods to genotype 230 individuals at 13 microsatellites in all the main forest fragments of its entire distribution area. Our analyses suggest that the Manankolana River and geographical distance are the primary structuring factors, while a national road crossing the region does not seem to impede gene flow. Altogether, our results are in agreement with a limited influence of forest habitat connectivity on gene flow patterns (except for North of the species’ range), suggesting that dispersal is still possible today among most forest patches for this species. Within forest patches, we find that dispersal is mainly among neighbouring social groups, hence confirming previous behavioural observations.     

Patterns of resource tracking by avian frugivores at multiple spatial scales: two case studies on discordance among scales

Scaling is relevant for the analysis of plant‐frugivore interaction, since the ecological and evolutionary outcomes of seed dispersal depend on the spatial and temporal scale at which frugivory patterns emerge. We analyse the relationship between fruit abundance and frugivore activity at local and landscape spatial scales in two different systems composed, respectively, by the bird‐dispersed woody plants Juniperus communis and Bursera fagaroides, and their frugivore assemblages. We use a hierarchical approach of nested patchiness of fruit‐resource, where patches are defined by individual plants within site, at the local scale, and by sites within region, at the landscape scale. The structure of patches is also described in terms of contrast (differences in fruit availability among patches) and aggregation (spatial distribution of patches). For J. communis, frugivore activity was positively related to fruit availability at the landscape scale, this pattern seldom emerging at the local scale; conversely, B. fagaroides showed a general trend of positive local pattern that disappeared at the landscape scale. These particular trends might be partially explained by differences in contrast and aggregation. The strong contrast among plants within site together with a high aggregation among sites would promote the B. fagaroides pattern to be only local, whereas in J. communis, low aggregation among sites within region would favour a sharp landscape‐scale pattern. Both systems showed discordant patterns of fruit‐resource tracking among consecutive spatial scales, but the sense of discordance differed among systems. These results, and the available multi‐scale frugivory data, suggest that discordance among successive scales allows to link directly frugivory patterns to resource‐tracking mechanisms acting at particular scales, resulting, thus, more informative than concordance observational data, in which landscape patterns might result from accumulated effect of local mechanisms. In this context, we propose new methodological approaches for a better understanding of the hierarchical behavioural mechanisms underpinning the multi‐scale resource tracking by frugivores.     

Bottom Communities of Semyachik Lagoon (Kronotskii Biosphere Reserve, Eastern Kamchatka)

Bottom communities of Potamogeton filiformis,Zostera marina+ Z. japonica+ Macoma balthica, Enteromorpha prolifera, and a stony block–boulder intertidal community were distinguished in Semyachik Lagoon. The macrobenthos associated with these communities is described. Generally, the biomass and occurrence frequency indices of the macrozoobenthic communities of the lagoon are an order of magnitude lower than those of macrophytobenthic communities (Kafanov, Plekhov, 1998); therefore, they do not play a significant role in bottom community structure. With the exception of the stony block–boulder intertidal community, their spatial distribution is entirely determined by the distribution of underwater vegetation, which is completely controlled by the geomorphological and hydrological features of the lagoon.     

Dynamics of potentially harmful microalgae in a confined Mediterranean Gulf—Assessing the risk of bloom formation

The population dynamics of potentially harmful microalgae was investigated in the semi-enclosed shallow Gulf of Kalloni, Greece (Aegean Sea, Eastern Mediterranean), during a 2-year period from August 2004 to March 2006. A total of 21 potentially harmful microalgae (bloom-forming and/or toxic) were identified including 3 diatoms and 18 dinoflagellates. The densities of each species were analyzed in time and space and in relation to environmental parameters. Some species such as Alexandrium insuetum, Heterocapsa circularisquama, Karlodinium veneficum, Scrippsiella trochoidea, and Ceratium spp. developed high cell concentrations, particularly during a Pseudo-nitzschia calliantha winter bloom. Other species such as Dinophysis caudata, Ostreopsis ovata, Prorocentrum minimum, and Protoperidinium crassipes were rare or appeared in small numbers. Densities of the most abundant species were closely associated with freshwater nutrient-rich inputs during winter, being negatively correlated with temperature and salinity and positively correlated with nitrogen. The spatial distribution of the abundant species exhibited a marked increase towards the inner part of the gulf, close to the main freshwater inputs, whereas some species were mainly concentrated in the dilute surface layer (1 m depth). Examination of the abundance–occupancy relationship revealed that the species more prone to bloom are those with wide spatial distribution and frequent presence throughout the year such as the diatom P. calliantha. Although blooms of cyst-forming species are rarer, an increased risk can be foreseen under favorable resource supply and environmental conditions during winter.     

The effect of travel time on oviposition behavior and spatial egg aggregation: experiments with Drosophila

A higher degree of spatial egg aggregation is often observed in environments where resource patches are more sparsely distributed. This suggests a higher probability of species coexistence when resource distribution is sparse. However, it is still unclear how the degree of spatial egg aggregation increases. I propose a model to explain this phenomenon, which assumes that (i) egg load (the number of mature eggs in ovaries) increases in the travel period between resource patches and (ii) the retention of eggs in the ovaries is harmful (egg load pressure). With these assumptions, a female would lay accumulated eggs on arrival at a new resource patch, resulting in a higher degree of spatial egg aggregation. Laboratory experiments with three drosophilid species, Drosophila simulans Surtevant, Drosophila auraria Peng, and Drosophila immigrans Sturtevant, support the model. This study provides evidence that host availability affects the spatial egg aggregation via egg load.