Population biology of the crustose red alga Lithophyllum incrustans Phil. 2. A comparison of populations from three areas of Britain

The age structures and reproductive characteristics of three populations of the crustose red alga Lithophyllum incrustans from Orkney, Northumberland and South Devon are described. Geographical trends in values of the generation time and the capacity for increase ( r _m) are shown for each population. Reproductive allocation, however, shows no such trend. Whilst 16% of the populations are sexual in Devon, only 4% are sexual in Northumberland, and sexual plants are absent from Orkney.     

The effect of natural selection on estimates of genetic divergence among populations of the Atlantic salmon

The effect of natural selection on the _mMEP-2 * locus on measures of genetic divergence among Atlantic salmon populations was investigated by examining the pattern of change in the level of genetic differentiation (F_ST) averaged over loci when data on the _mMEP-2 * locus were either included or excluded. The level of F_ST among populations at various geographic scales was estimated from allele frequencies at up to four loci (_s AAT-4 *, IDDH-1 *, IDHP-3 *, and _mMEP-2 *). At smaller geographic scales (within river systems or limited geographic regions) levels of variance in _mMEP-2 * allele frequencies were reduced relative to mean levels. At larger geographic scales (across continents or the species range) variation in _mMEP-2 * allele frequencies was greater than mean levels. These results suggest an a priori hypothesis for the effect of selection on the _mMEP-2 * locus which may be applied in future studies on variation in protein coding or other (e.g. mini- and microsatellite) loci in the Atlantic salmon. It is recommended that estimates of gene flow among populations of the Atlantic salmon based on mean F _ST estimates which include data on the _mMEP-2 * locus should be viewed with caution.     

Enhanced assimilation rate and water use efficiency with latitude through increased photosynthetic capacity and internal conductance in balsam poplar (Populus balsamifera L.)

In outdoor common gardens, high latitude populations of deciduous tree species often display higher assimilation rates ( A ) than low latitude populations, but they accomplish less height. To test whether trends in A reflect adaptation to growing season length or, alternatively, are garden growth artefacts, we examined variation in height increment and ecophysiological traits in a range-wide collection of Populus balsamifera L. populations from 21 provenances, during unconstrained growth in a greenhouse. Rooted cuttings, maintained without resource limitation under 21 h photoperiod for 90 d, displayed increasing height growth, A , leaf mass per area and leaf N per area with latitude whereas stomatal conductance ( g _s) showed no pattern. Water-use efficiency as indicated by both gas exchange and δ ¹³C increased with latitude, whereas photosynthetic nitrogen-use efficiency decreased. Differences in δ ¹³C were less than expected based on A/g _s, suggesting coextensive variation in internal conductance ( g _m). Analysis of A – C _i curves on a subset of populations showed that high latitude genotypes had greater g _m than low-latitude genotypes. We conclude that higher peak rates of height growth in high latitude genotypes of balsam poplar are supported by higher A , achieved partly through higher g _m, to help compensate for a shorter growing season.     

The variability of orchid population size

Orchid population size has long been believed to be highly variable in time and space. Here we present the first quantitative assessment of the variability of orchid population sizes and compare them with plant and animal population data from the literature. Three measures of temporal variation were used (standard deviation of log₁₀ (population size), Hurst exponent and variance in the intrinsic rate of increase). Eight unfertilized plots of Orchis morio in a factorial fertilizer experiment were assessed for variability in population size over a 26 year period. The Hurst exponent across the eight plots gave measures consistent with pink noise well into black noise (0.86 to 1.87). The variation in the intrinsic rate of increase suggested that the expected time to extinction in the plots differed by an order of magnitude. Standard deviation of log₁₀ (population size) across plots was greater than the corresponding temporal variation within plots. Standard deviation of log₁₀ (population size) reached an asymptote between 10 and 20 years. The range of temporal variation between plots in this and other orchid populations was as great as the mean values reported for birds, insects and mammals. These results have highlighted the importance of spatial variation: until we know the relative importance of spatial and temporal variation for more plant species we will be unable to assess whether orchid populations are more variable in size than other species.     

Intrinsic and extrinsic determinants of mountain pine beetle population growth

1 Mountain pine beetle Dendroctonus ponderosae populations have large, economically significant outbreaks. Density dependence and environmental variability are expected to have important effects on their dynamics. We analysed time series data from an outbreak in the 1930s to determine the relative importance of population density and environmental variability on local population growth rates.
2 Resource depletion occurred rapidly at the scale of 0.4 ha and population growth rates were strongly density dependent. Annual environmental changes did not have detectable effects on population growth rates, leading to the conclusion that intrinsic processes influenced local population density more than extrinsic factors during this outbreak.
3 Our calculated value of r _max (1.16) does not suggest intrinsically cyclic population dynamics. Our estimate of r _max and density dependence will be useful in developing applied models of mountain pine beetle outbreaks, and the subsequent evaluation of management strategies.     

害虫种群动态模型的燕尾突变分析

在农田生态系统中,以作物状况、气象因素及天敌分别为3种控制变量,以害虫种群数量动态为状态变量,建立了燕尾突变模型,并用燕尾突变模型的性质分析害虫种群数量动态中产生的突变现象.具体对燕尾突变的分歧点集所分各个控制区域的系统势函数形式和平衡点情况进行了分析,说明了害虫种群数量发生突变的条件和机理,为实际应用提供理论依据.同时利用燕尾突变的性质直观描述了害虫种群数量变化中的突跳和滞后等现象.     

马尾松林节肢动物群落的稳定性

依据广西大青山马尾松林区马尾松毛虫一个暴发周期中食叶、捕食、寄生、刺吸四大类群多样性指数(H′)、丰富度指数(MD)、均匀度指数(J)和害虫与天敌的数量比例的数据,建立突变模型对马尾松林节肢动物群落的稳定性进行研究,并利用湖南桂阳数据对模型进行了检验.结果表明:在马尾松毛虫的整个暴发过程中,暴发区在暴发年的昆虫生物群落处于明显的不稳定状态,而在非暴发年时,群落则处于亚稳定的状态;非暴发区在暴发年处于亚稳定的状态,非暴发年时处于稳定状态.在松毛虫各个发生阶段,当上升期处于不稳定状态时,有可能导致松毛虫的大发生;松毛虫暴发后,节肢动物群落依旧处于不稳定状态,有可能会造成松毛虫的连续暴发,这主要依赖于各种因子的影响.马尾松毛虫暴发呈现非线性、突变性等特点,食叶类群的影响为马尾松毛虫暴发的关键因子,各类群作用均衡的系统比较稳定,虫害暴发是群落结构趋稳调节过程中的强烈外部表现.研究表明,突变模型在检测群落结构稳定性和预测松毛虫发生上有很好的应用前景.     

Sexual and geographical variation in life history parameters of the shorthorn sculpin

A total of 293 shorthorn sculpins Myoxocephalus scorpius from Tromsø, northern Norway, were sampled between November 1998 and April 1999 to determine sex, total length, age, growth, maturity and mortality. Females grew to larger sizes ( L _∞=26·9 v. 18·5 cm), matured later (2 v. 1 year of age) at larger size (maturation length=16 v. 14 cm L _T), and had lower instantaneous mortality rates (0·93 v. 1·20 year⁻¹) than males. The life history parameters of shorthorn sculpins in northern Norway were more similar to the parameters of short-lived central European populations than to the parameters of the long-lived population of Newfoundland. This study confirms that northern Norwegian shorthorn sculpins exhibit sexual dimorphism as in other shorthorn sculpin populations. The relationships between growth pattern, age at maturity and mortality rates observed in the Tromsø population and in other shorthorn sculpin populations, correspond well with the predictions from a published life history model.     

Probing behaviour of Aphis craccivora Koch on host plants of different nutritional quality

Abstract 1. Reciprocal transfer experiments were undertaken using four different hosts to examine the effects of a change in host at adult moult on the probing behaviour of the cowpea aphid Aphis craccivora Koch.
2. The highest intrinsic rate of increase r _m was achieved by aphids born and reared on cowpea, followed by those born and reared on broad bean, then Larissa, and finally Huia.
3. Mean probing time, time to first probe, number of probes per time allocation, and non-probing time were all examined. Host quality r _m did not affect the instantaneous probability of probing, and aphids that did not find a probing site within 200 s did not settle and did not probe further on that leaf/stem.     

The effect of incubation temperature, sodium chloride and ascorbic acid on the growth kinetics of Aeromonas hydrophila

The effects of temperature, sodium chloride and ascorbic acid on the aerobic growth kinetics of a clinical strain of Aeromonas hydrophila were evaluated. At 5°C, ascorbic acid (1 mmol l^-1) and sodium chloride (3% w/v) inhibited the growth of the organism. At 10°C, ascorbic acid depressed only the maximum population densities (A) by approximately 2 log cycles, but not maximum specific growth rate (μ_m) or the lag time (Λ). On the contrary, NaCl caused A to increase, with the effect being greatest when the NaCl content was 1.5%. Temperature increase from 10 to 15°C resulted in an approximate doubling of μ_m and unexpectedly an apparent increase in Λ However, this apparent increase resulted from the particular manner in which the lag phase was mathematically calculated.     

Temporal stability in size distributions and growth rates of three Esox lucius L. populations. A result of cannibalism?

The population total length ( L _T) structures and individual growth trajectories for three stream living pike Esox lucius populations were studied for 7 years. All three populations exhibited small variation in both population L _T structure and individual growth trajectories over time. These dynamics contrasted to the much more variable population L _T structure of perch Perca fluviatilis studied previously. The difference in population dynamics between the two species was related to differences in prey:predator size ratios. The pike populations in the more open and larger streams grew to larger sizes, but this difference in life history did not affect population dynamics of pike. It is concluded that (1) cannibalistic population dynamics may be predicted from individual life-history characteristics such as minimum and maximum victim:cannibal size ratios and (2) the cannibal-driven population dynamics observed in pike seems to be robust to variation in environmental conditions (system openness).     

Photosynthesis is improved by exogenous glycinebetaine in salt-stressed maize plants

The effects of exogenous application of glycinebetaine (GB) (10 m M ) on growth, leaf water content, water use efficiency, photosynthetic gas exchange, and photosystem II photochemistry were investigated in maize plants subjected to salt stress (50 and 100 m M NaCl). Salt stress resulted in the decrease in growth and leaf relative water content as well as net photosynthesis and the apparent quantum yield of photosynthesis. Stomatal conductance, evaporation rate, and water use efficiency were decreased in salt-stressed plants. Salt stress also caused a decrease in the actual efficiency of PSII ( Φ _PSII), the efficiency of excitation energy capture by open PSII reaction centers ( F _v'/ F _m'), and the coefficients of photochemical quenching ( q _P) but caused an increase in non-photochemical quenching (NPQ). Salt stress showed no effects on the maximal efficiency of PSII photochemistry ( F _v/ F _m). On the other hand, in salt-stressed plants, GB application improved growth, leaf water content, net photosynthesis, and the apparent quantum yield of photosynthesis. GB application also increased stomatal conductance, leaf evaporation rate, and water use efficiency. In addition, GB application increased Φ _PSII, F _v'/ F _m', and q _P but decreased NPQ. However, GB application showed no effects on F _v/ F _m. These results suggest that photosynthesis was improved by GB application in salt-stressed plants and such an improvement was associated with an improvement in stomatal conductance and the actual PSII efficiency.     

Widespread gene flow and high genetic variability in populations of water voles Arvicola terrestris in patchy habitats

Theory predicts that the impact of gene flow on the genetic structure of populations in patchy habitats depends on its scale and the demographic attributes of demes (e.g. local colony sizes and timing of reproduction), but empirical evidence is scarce. We inferred the impact of gene flow on genetic structure among populations of water voles Arvicola terrestris that differed in average colony sizes, population turnover and degree of patchiness. Colonies typically consisted of few reproducing adults and several juveniles. Twelve polymorphic microsatellite DNA loci were examined. Levels of individual genetic variability in all areas were high ( H _O= 0.69–0.78). Assignments of juveniles to parents revealed frequent dispersal over long distances. The populations showed negative F _IS values among juveniles, F _IS values around zero among adults, high F _ST values among colonies for juveniles, and moderate, often insignificant, F _ST values for parents. We inferred that excess heterozygosity within colonies reflected the few individuals dispersing from a large area to form discrete breeding colonies. Thus pre-breeding dispersal followed by rapid reproduction results in a seasonal increase in differentiation due to local family groups. Genetic variation was as high in low-density populations in patchy habitats as in populations in continuous habitats used for comparison. In contrast to most theoretical predictions, we found that populations living in patchy habitats can maintain high levels of genetic variability when only a few adults contribute to breeding in each colony, when the variance of reproductive success among colonies is likely to be low, and when dispersal between colonies exceeds nearest-neighbour distances.     

Population genetic structure of wild rice Oryza glumaepatula distributed in the Amazon flood area influenced by its life-history traits

Wild plant species develop their own way of living to adapt to the specific environment of their habitats. Their life-history traits strongly affect the genetic structure of the population. The wild species Oryza glumaepatula Steud. growing in the Amazon basin seems to have characteristic life-history traits suited for the flood condition. At the vegetative growth stage, the culms frequently break at internodes. With no roots anchoring on the ground, plant bodies floating in the water move downriver by water current and wind. To examine the association between the life-history traits and genetic population structure of Amazonian O. glumaepatula , we analysed allozyme variability at 29 loci of 16 enzymes using 37 populations from five regions. Allozymes were not so variable (total gene diversity H _E = 0.044) compared with Asian wild rice, O. rufipogon Griff. The bottleneck effect and rare opportunity of interspecies gene flow may prevent the development of allozyme variability. Population genotypes tended to be differentiated among geographically isolated regions. Observed heterozygosities were much lower than expected heterozygosities, or gene diversity ( H _O = 0.003 for whole population) and F _IS over polymorphic loci was 0.931, indicating that O. glumaepatula has developed an inbreeding system. But, the intrapopulation gene diversity ( H _S) was higher than interpopulation gene diversity ( D _ST), as generally observed in outbreeding populations. The migration ability of O. glumaepatula makes long-distance seed dispersal possible. This might have led to frequent gene flow among populations.     

Marked genetic divergence revealed by allozymes among populations of the guppy Poecilia reticulata (Poeciliidae), in Trinidad

Populations of the guppy Poecilia reticulata from six locations in N. Trinidad were examined by starch gel electrophoresis to estimate their degree of genetic divergence. Variability at seven enzyme-coding loci demonstrated that populations differed markedly in allele frequencies with some allelic substitution between sites (for 23 loci, Nei's mean genetic identity, Ī ranged from 0.869–1.00; the coefficient of gene differentiation, G _ST= 0.086; and the absolute differentiation between populations, _m= 0.044). There was a good correspondence between degree of physical isolation and extent of genetic differentiation, as exemplified by the partitioning of gene diversity (Nei's gene diversity analysis = 66% between river basins; 32% within river basins; 2% within rivers), though there was considerable variability in the contribution of individual loci. Most populations were in Hardy-Weinberg equilibrium, and any significant deviations were due exclusively to heterozygote deficiencies. The patterns of population differentiation are discussed in relation to probable past geological and historical events, and present-day evolutionary forces. Notable among these are previous continental land connections, periodic immigration from N.E. South America, and post-colonization events including differential predation, sexual selection, apparent restricted vagility and small effective population sizes.     

Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence?

Genetic stochasticity due to small population size contributes to population extinction, especially when population fragmentation disrupts gene flow. Estimates of effective population size ( N _e) can therefore be informative about population persistence, but there is a need for an assessment of their consistency and informative relevance. Here we review the body of empirical estimates of N _e for wild populations obtained with the temporal genetic method and published since Frankham's (1995 ) review. Theoretical considerations have identified important sources of bias for this analytical approach, and we use empirical data to investigate the extent of these biases. We find that particularly model selection and sampling require more attention in future studies.
We report a median unbiased N _e estimate of 260 (among 83 studies) and find that this median estimate tends to be smaller for populations of conservation concern, which may therefore be more sensitive to genetic stochasticity. Furthermore, we report a median N _e/ N ratio of 0.14, and find that this ratio may actually be higher for small populations, suggesting changes in biological interactions at low population abundances. We confirm the role of gene flow in countering genetic stochasticity by finding that N _e correlates strongest with neutral genetic metrics when populations can be considered isolated. This underlines the importance of gene flow for the estimation of N _e, and of population connectivity for conservation in general. Reductions in contemporary gene flow due to ongoing habitat fragmentation will likely increase the prevalence of genetic stochasticity, which should therefore remain a focal point in the conservation of biodiversity.     

Soils contain two different activities for oxidation of hydrogen

Abstract Hydrogen oxidation rates were measured in a neutral compost soil and an acidic sandy loam at H₂ mixing ratios of 0.01 to 5000 ppmv. The kinetics were biphasic showing two different K _m values for H₂, one at about 10–40 nM dissolved H₂, the other at about 1.2–1.4 μM H₂. The low- K _m activity was less sensitive to chloroform fumigation than the high- K _m activity. If sterile soil was amended with Paracoccus denitrificans or a H₂-oxidizing strain isolated from compost soil, it exhibited only a high- K _m (0.7–0.9 μM) activity. It also failed to utilize H₂ mixing ratios below a threshold of 1.6–3.0 ppmv H₂ (160–300 mPa). A similar result was obtained when fresh soil samples were suspended in water, and H₂ oxidation was determined from the decrease of dissolved H₂. However, H₂ was again utilized to mixing ratios lower than 0.05 ppmv, if the supernatant of the soil suspension or the settled soil particles were dried onto sterile soil or purified quarz sand. Obviously, soils contain two different activities for oxidation of H₂: (1) a high- K _m, high-threshold activity which apparently is due to aerobic H₂-oxidizing bacteria, and (2) a low- K _m, low-threshold activity whose origin is unknown but presumably is due to soil enzymes.     

Theoretical reconsiderations when estimating the mesophyll conductance to CO2 diffusion in leaves of C3 plants by analysis of combined gas exchange and chlorophyll fluorescence measurements

Existing methods to estimate the mesophyll conductance to CO₂ diffusion ( g _m) are often based on combined gas exchange and chlorophyll fluorescence measurements. However, estimations of average g _m by these methods are often unreliable either because the range of usable data is too narrow or because the estimations are very sensitive to measurement errors. We describe three method variants to estimate g _m, for which a wider range of data are usable. They use curve-fitting techniques, which minimise the sum of squared model deviations from the data for A (CO₂ assimilation rate) or for J (linear electron transport rate). Like the existing approaches, they are all based on common physiological principles assuming that electron transport limits A . The proposed variants were far less sensitive than the existing approaches to 'measurement noise' either created randomly in the generated data set or inevitably existing in real data sets. Yet, the estimates of g _m from the three variants differed by approximately 15%. Moreover, for each variant, a stoichiometric uncertainty in linear electron transport-limited photosynthesis can cause another 15% difference. Any estimation of g _m using gas exchange and chlorophyll fluorescence measurements should be considered with caution, especially when g _m is high.     

Population viability analysis for Guarianthe aurantiaca, an ornamental epiphytic orchid harvested in Southeast México

The trade of wild epiphytic orchids has put many populations at risk of extinction; however, little is known about the impact of repeated harvesting of individuals on population dynamics. A population viability analysis (PVA) was developed to simulate the impact of harvesting on the risk of extinction of a population of an epiphytic orchid that is sold in Mexican markets. In January 2004, 388 individuals of Guarianthe aurantiaca were labeled and measured. The same individuals were measured again in December 2005 and December 2006. Capsule production and mortality were also recorded. Deterministic (d) and stochastic (s) matrix models were developed to estimate the population growth rate (λ). A PVA was developed to evaluate the probability of extinction over a 100-year period, given a threshold of 5% of the initial population and different harvest intensities of G. aurantiaca . The λ_d values were statistically indistinguishable from unity (0.989 ± 0.103 for 2004–2005; 0.990 ± 0.087 for 2005–2006); the λ_s values were below unity (0.988 ± 0.001). The reproductive stages had the highest elasticity values, whereas the persistence of individuals in their category was the demographic process with the highest elasticity. A life table response experiment showed that the difference in the λ_d values was accounted for by the positive contribution of the stasis of individuals in category j and the retrogression of individuals in category r₁ to category j. The extinction risk was 100% when more than 5% of the reproductive individuals were harvested. The results suggest that this G. aurantiaca population is in a precarious equilibrium and harvesting should be controlled and restricted to immature individuals.     

Tyrosine Hydroxylase from Bovine Striatum: Catalytic Properties of the Phosphorylated and Nonphosphorylated Forms of the Purified Enzyme

Abstract: The properties of purified tyrosine hydroxylase (TH) from bovine corpus striatum, both native and phosphorylated forms of the enzyme, were studied. TH had a tendency toward greater affinity for tetrahydrobiopterin (BH₄) than for the synthetic cofactor 6-methyltetrahydropterin (6-MPH₄), although the maximal velocity of the TH-catalyzed reaction was greater with 6-MPH4. Phosphorylation increased the affinity of TH for cofactor at pH 6.0, with little change in V _max. At pH 7.0, phosphorylation caused increased activation of TH by increasing V _max as well as reducing the K _m for cofactor. The K _m for dopamine was increased twofold by phosphorylation at pH 6.0, but eightfold at pH 7.0. Phosphorylation was not associated with a change in K _m for tyrosine at any pH or with any cofactor studied, although the K _m for tyrosine of TH was cofactor-dependent and seven to eight times greater with 6-MPH₄ than with BH₄ as cofactor. Heparin and NaCl activated native TH at pH 6.0, but not at pH 7.0. Phosphorylated TH was unaffected by heparin or salt at pH 6.0, but was relatively inhibited at pH 7.0. The data are presented in the context of the physiological environment of TH.