多元统计方法在节肢动物群落分析中的应用

近年来有关节肢动物群落的研究报道较多,而传统的、简单的多样性指数分析远远不能满足对高通量群落数据的挖掘。采用多元统计方法可以较好地分析群落数据。其中,在研究某一处理的长期效应时,主响应曲线是一种经典的多元分析方法;而非度量多维尺度分析具有能处理较大量的数据且常能以低维排序图反映结果的优点,是一种具有广泛应用前景的排序技术。本文以Bt棉与非Bt棉不同比例混作棉田的节肢动物群落为例,详尽地介绍了主响应曲线和非度量多维尺度在节肢动物群落分析中的应用。     

基于时间聚类分析和独立成分分析的癫痫fMRI盲分析方法

提出了一种基于时间聚类分析和独立成分分析的癫痫fMRI数据盲分析方法,并将两种方法有效联合,提取发作间期的癫痫fMRI激活时空信息.该方法首先由时间聚类分析得到与激活相关的时间峰度特征曲线,以此特征作为时间参考信息;再由空间独立成分分析分解fMRI信号得到空间独立成分;最后将每个独立成分所对应的时间曲线与参考曲线做相关分析提取相应脑激活图.提出的方法无需任何关于癫痫fMRI的先验假设信息,有效解决了独立成分的排序问题,实现了对数据的盲分析.仿真试验结果阐明了这一方法的有效性及可靠性,对癫痫数据的试验结果显示空间定位准确性优于统计参数图方法.     

基于物质流分析和数据包络分析的区域生态效率评价——以江苏省为例

区域生态效率(eco-efficiency)评价是考量区域可持发展的重要内容.基于物质流分析(material flow analysis, MFA)构建区域生态效率评价指标体系,并将污染物排放作为一种非期望输入引入到数据包络分析(data envelopment analysis, DEA)模型中,以江苏省(1990～2005年)为例进行生态效率分析评价.结果表明,江苏省的区域生态效率在1990～2005年期间呈现逐步上升的趋势.但是,同期的总物质投入(total material input, TMI)、物质需求总量(total material requirement, TMR)和污染物排放量也呈上升趋势.因此,江苏省社会经济发展和环境影响总体上呈现"弱脱钩(weak de-link)".     

斑龙芋属植物的系统发育分析

运用分支分类分析方法对斑龙芋属及其近缘属进行系统发育分析,以4个属的15个种作为15个分支分类单位,选择菖蒲科的菖蒲作为外类群,从斑龙芋属植物特征中选取了14个性状作为建立数据矩阵的基本资料,并以外类群比较和通行的形态演化规律,及核型演化规律为依据对这些性状进行极化,采用改进的最大同步法和最小平行法进行分类运算,按照最简约的原则,运用演化长度较短的最大同步法谱系分支图,作为讨论的基础,讨论了斑龙芋属及其近缘属的系统关系。     

农业生态系统能量分析

农业生态系统的能量分析从能流着手进行农业生态系统的功能量化分析,是农业生态系统重要的研究方法之一。本文简要回顾讨论了农业生态系统能量分析研究的历史和进展。着重讨论了能值分析方法对传统能量分析方法的新发展,分析了农业生态系统能量分析目前存在的问题,并就其进一步发展方向进行了探讨能值分析方法用生产某种能量或物质所直接或间接耗用的太阳能值量来衡量该能量或物质的价值,不仅在概念上而且在算法上都是原有能量分析方法的新发展．发展到能值分析阶段的农业生态系统的能量分析方法亦存有自身的不足之处,如能值转换率的计算过于繁复,能值指标体系缺乏统一性及系统可持续发展的能值综合评价指标缺乏等。这些问题的解决与能值最大功率的明晰化、能值分析与能量及耗散分析的结合、与物质分析及景观结构分析的结合等研究等共同构成了农业生态系统能量分析的几大发展方向。     

泡桐属七种植物的RAPD分析

利用 1 3个 1 0 mer的随机引物对中国泡桐属的 7个种进行了 RAPD分析 ,对扩增形成的谱带进行了对比 ,发现 7个种间存在较丰富的多态性带纹。经用 UPGMA法聚类结果说明可把研究的 7个种分成 2个类群。其中白花泡桐与川泡桐亲缘关系最近 ,二者与揪叶泡桐、南方泡桐、山明泡桐归为 1个类群。毛泡桐与兰考泡桐亲缘关系也较近 ,二者在系统演化上比较原始 ,归为 1个类群。     

生态系统的能值分析

论述了国际生态学最新发展的能值(Emergy)分析方法与原理,并与能量分析作比较研究.任何产品或劳务形成过程中所需投入的直接和间接的一种有效能之量称为其具有的能值;单位能量相当的能值称为该能量的能值转换率.能值和能值转换率揭示了能量的能质、等级及其真实价值;以能值尺度可衡量比较不同类别的能量,综合分析各种生态系统的生态流,定量研究生态与经济效率及其关联.     

生态模型的灵敏度分析

灵敏度分析用于定性或定量地评价模型参数误差对模型结果产生的影响,是模型参数化过程和模型校正过程中的有用工具,具有重要的生态学意义．灵敏度分析包括局部灵敏度分析和全局灵敏度分析．局部灵敏度分析只检验单个参数的变化对模型结果的影响程度;全局灵敏度分析则检验多个参数的变化对模型运行结果总的影响,并分析每一个参数及其参数之间相互作用对模型结果的影响．目前,在对生态模型的灵敏度分析中,越来越倾向于使用全局灵敏度分析的方法．但国内仍多采用局部灵敏度分析方法,很少采用全局灵敏度分析方法．文中详细论述了局部灵敏分析和全局灵敏度分析的主要方法(一次变换法、多元回归法、Morris法、Sobol’法、傅里叶幅度灵敏度检验法和傅里叶幅度灵敏度检验扩展法),希望能为国内生态模型的发展提供一个比较完善的灵敏度分析方法库．结合国内外的灵敏度分析发展现状,指出联合灵敏度研究、灵敏度共性研究及空间直观景观模型的灵敏度分析将为生态模型灵敏度分析研究中的热点和难点．     

HPLC fingerprints combined with principal component analysis,hierarchical cluster analysis and linear discriminant analysis for the classification and differentiation of Peganum sp. indigenous to China

Introduction – Seeds of wild Peganum harmala Linn., P. multisectum (Maxim) Bobr., P. nigellastrum Bunge and a probable indeterminate species, herein referred to as P. variety, are commonly used in Chinese medicine. These seeds cannot be differentiated based on morphology. Objective – Seeds of P. harmala Linn., P. multisectum (Maxim) Bobr., P. nigellastrum Bunge and P. variety were collected in different provinces in China and their HPLC profiles were recorded for statistical analysis and pattern recognition. Methodology – HPLC chromatograms of seed extracts were recorded under the same conditions. Individual HPLC chromatograms for each species were evaluated against the mean chromatogram for the same species generated using a similarity evaluation computer program. Data from chromatographic fingerprints were also processed using principal component analysis (PCA), hierarchical cluster analysis (HCA) and linear discriminant analysis (LDA). Results – The Peganum sp. seed extracts had similar HPLC fingerprints but with some inter‐specific differences. The chromatographic fingerprints combined with PCA, HCA and LDA could distinguish the seeds of the different species of Peganum investigated. Conclusion – HPLC fingerprints can be used to authenticate and differentiate the seeds of three different species of genus Peganum indigenous to China. The results indicated that the unidentified P. variety might indeed be a new species or variety. Copyright © 2009 John Wiley & Sons, Ltd.     

生态系统的能值分析

论述了国际生态学最新发展的能值（Emergy）分析方法与原理,并与能量分析作比较研究,任何产品或劳务形成过程中所需投入的直接和间接的一种有效能之量称为其具有的能值;单位能量相当的能值称为该能量的能值转换率,能值和能值转移率揭示了能量的能质、等级及其真实价值;以能值尺度可衡量比较不同类别的能量,综合分析各种生态系统的生态流,定量研究生态与经济效率及其关联。     

基于文献计量分析的生态修复现状研究

以中国知网学术期刊网络出版总库和WEB OF SCIENCE中1997—2015年的期刊论文为数据源,以"生态修复(ecological remediation和ecological restoration)"为关键词进行检索,利用共词分析方法,同时结合Bibexcel软件对检索结果进行分析,利用Ucinet和Netdraw软件绘制出共词网络可视图,并通过SPSS软件进行多维尺度分析,以此来研究高频关键词之间的内在联系,探讨国内外生态修复领域中的研究热点以及研究现状。以文献计量学的分析方法客观的评价国内外生态修复的研究概况及研究热点,明确生态修复技术研究探索的方向,从而为加强生态修复技术的研究提供理论依据。     

The next generation of literature analysis: integration of genomic analysis into text mining

Text-mining systems are indispensable tools to reduce the increasing flux of information in scientific literature to topics pertinent to a particular interest in focus. Most of the scientific literature is published as unstructured free text, complicating the development of data processing tools, which rely on structured information. To overcome the problems of free text analysis, structured, hand-curated information derived from literature is integrated in text-mining systems to improve precision and recall. In this paper several text-mining approaches are reviewed and the next step in development of text-mining systems, which is based on a concept of multiple lines of evidence, is described: results from literature analysis are combined with evidence from experiments and genome analysis to improve the accuracy of results and to generate additional knowledge beyond what is known solely from literature.     

Some remarks about the analysis of active control studies

In an active-controlled trial, the experimental treatment can be declared to be non-inferior to the control if the confidence interval for the difference excludes a fixed pre-specified margin. Recently, some articles have discussed an alternative method where the data from the current study and placebo-controlled studies for the active control are combined together into a single test statistic to test whether a fixed fraction of the effect of the active control is preserved. It has been shown that, conditional on nuisance parameters from the active-controlled study, a fixed margin can be defined that will be operationally equivalent to this latter method. In this article, we will discuss statistical properties associated with these approaches. Specifically, the interim monitoring boundaries and level of evidence will be considered.     

Noise analysis of cytosolic calcium image data

Cellular Ca²⁺ signals are often constrained to cytosolic micro- or nano-domains where stochastic openings of Ca²⁺ channels cause large fluctuations in local Ca²⁺ concentration (Ca²⁺ ‘noise’). With the advent of TIRF microscopy to image the fluorescence of Ca²⁺-sensitive probes from attoliter volumes it has become possible to directly monitor these signals, which closely track the gating of plasmalemmal and ER Ca²⁺-permeable channels. Nevertheless, it is likely that many physiologically important Ca²⁺ signals are too small to resolve as discrete events in fluorescence recordings. By analogy with noise analysis of electrophysiological data, we explore here the use of statistical approaches to detect and analyze such Ca²⁺ noise in images obtained using Ca²⁺-sensitive indicator dyes. We describe two techniques - power spectrum analysis and spatio-temporal correlation - and demonstrate that both effectively identify discrete, spatially localized calcium release events (Ca²⁺ puffs). Moreover, we show they are able to detect localized noise fluctuations in a case where discrete events cannot directly be resolved.     

The multivariate analysis of dermatoglyphics in population systematics

In this paper a multivariate analysis of dermatoglyphics was carried out. The following traits were used: pattern intensity on fingers, average of main line D terminations and frequencies of patterns in the five configurational areas of the palm. Firstly a cluster analysis is produced and completed with a principal components analysis. The results of both studies show clear agreement. The main conclusion is: the multivariate analysis of dermatoglyphics displays several groups of populations, which with the peculiarities pointed out in the paper, are in concordance with the classical racial stocks.     

对应分析和去趋势分析在有蹄类取食模式研究中的应用

本研究将2009年1月和2010年1月小兴安岭大沾河湿地自然保护区二可河林场内驼鹿冬季食性作为原始数据,分别以对应分析（CA）、去趋势分析（DCA）,并将数据以样本为单位进行标准化后,再进行去趋势分析（DCA_std）3种排序方法,对驼鹿冬季取食模式进行了研究,后通过普鲁克分析,比较了不同排序方法对大型有蹄类取食模式研究的效果。结果表明,3种排序法的1轴和2轴均能涵盖绝大多数信息量,CA涵盖79.27%,DCA涵盖66.65%,DCA_std涵盖68.22%;3种方法均能够在1轴上区分针叶树和落叶乔木类食物,在2轴上,3种方法主要能够达到针叶树种与除落叶乔木外的其他植物类别的区分。虽三者均能够展现有蹄类取食模式,但在图形可视化后,仅DCA_std无明显的弓形效应。普鲁克分析结果表明,DCA_std样本位移平方和与CA和DCA均有很大差异,即将数据先进行标准化再进行DCA分析能够有效去除弓形效应。因此,在由多度组成的食性数据在进行标准DCA分析前,应对数据进行前期处理会得到更好的效果。同时,以样本为单位的标准化将使排序分析结果生态学意义更明确。     

Spectral analysis of unequally spaced sampled time series

Abstract

The diurnal excretion patterns of several electrolytes and urea were studied in 5 freely moving rats on an elemental diet (Vivonex) administered either orally or as a continuous intragastric feeding; the lights were on from 07.00–19.00 h and off from 19.00–07.00 h. During continuous feeding the diurnal rhythms persisted, although the amplitude was lower than during oral feeding. The maximum excretion rates of potassium, phosphate and urea all coincided under both feeding regimens. The time of the maximum calcium excretion rate coincided with that of sodium during oral feeding but not during continuous feeding. During continuous feeding the maximum calcium excretion rate shifted from 04.00 to 10.00 h. The diurnal excretion of magnesium during continuous feeding was abolished, possibly as a result of the low calcium intake. From this study it can be concluded that duringcontinuous intragastric feeding all of the studied excretion patterns persist, with the exception of magnesium, which indicates that these rhythms are not merely the result of the intermittent intake of food and minerals.     

葱属12种植物的RAPD分析

采用随机引物扩增多态DNA技术对葱属部分植物进行了种间亲缘关系的研究。结果说明12种材料之间存在丰富的多态性,遗传距离变幅在0.2500-0.7887之间,聚类分析说明蒙古韭,山韭,野韭,韭菜（栽培韭）,野生韭菜,矮韭亲缘关系较近,聚为一支,其中韭菜与野生韭菜亲缘关系最近。天蒜,薤白,蒜聚为一支,葱,洋葱,红葱聚为一支,其中葱与洋葱,红葱的遗传分化较大。