The X-ray crystal structures of [Hg(C6F4OH-p)2OH2] and [Hg(C6H4OMe-p)(O2CC6F4OMe-p)] - Factors influencing supramolecular Hg-O interactions

An X-ray crystal structure has shown that the previously reported bis(p-hydroxytetrafluorophenyl)mercury crystallises as a monohydrate [Hg(C₆F₄OH-p)₂(OH₂)] exhibiting rare coordination of water to a diorganomercurial. The stereochemistry of the three-coordinate mercury is T-shaped with the water coordinated perpendicular to the near linear C-Hg-C unit. The molecules are linked in chains by hydrogen bonding between the hydroxy groups, and the chains into layers by hydrogen bonding between the water oxygen and an OH group. Thermogravimetric analysis shows two water molecules are eliminated together, both the coordinated water and one formed through condensation of the linked -OH groups. In [Hg(p-MeOC₆H₄)(O₂CC₆F₄OMe-p)], molecules with a near linear strongly bonded C-Hg-O arrangement are observed. These are linked into a linear polymer through Hg-O (carboxylate) bridges giving alternate four-membered and eight-membered rings giving mercury overall square planar stereochemistry.     

Comparative study of three magnetic nano-particles (FeSO4, FeSO4/SiO2, FeSO4/SiO2/TiO2) in plasmid DNA extraction

Recent updates on Magnetic Nano-Particles (MNPs) based separation of nucleic acids have received more attention due to their easy manipulation, simplicity, ease of automation and cost-effectiveness. It has been indicated that DNA molecules absorb on solid surfaces via hydrogen-bonding, and hydrophobic and electrostatic interactions. These properties highly depend on the surface condition of the solid support. Therefore, surface modification of MNPs may enhance their functionality and specification. In the present study, we functionalized Fe₃O₄ nano-particle surface utilizing SiO₂ and TiO₂ layer as Fe₃O₄/SiO₂ and Fe₃O₄/SiO₂/TiO₂ and then compare their functionality in the adsorption of plasmid DNA molecules with the naked Fe₃O₄ nano-particles. The result obtained showed that the purity and amount of DNA extracted by Fe₃O₄ coated by SiO₂ or SiO₂/TiO₂ were higher than the naked Fe₃O₄ nano-particles. Furthermore, we obtained pH 8 and 1.5 M NaCl as an optimal condition for desorption of DNA from MNPs. The result further showed that, 0.2 mg nano-particle and 10 min at 55 °C are the optimal conditions for DNA desorption from nano-particles. In conclusion, we recommended Fe₃O₄/SiO₂/TiO₂ as a new MNP for separation of DNA molecules from biological sources.     

The clearance of human fibrinogen fragments D1, D2, D3 and fibrin fragment D1 dimer in mice

The clearance of human fibrinogen fragments D₁, D₂, D₃ and fibrin fragment D₁ dimer were studied in the mouse model. Clearance of these fragments is a complex process involving clearance from blood into three other compartments. The overall clearance of fragment D₁ and its dimer were essentially identical. Fragments D₂ and D₃ cleared at a progressively slower rate. Competition studies were performed between ¹²⁵I-labeled fragment D₁ and large molar excesses of unlabelled human fragments D₁, D₂, D₃, D₁ dimer, fragment E, fibrinogen, macroalbumin, mannan and asialooroscomucoid. Of these ligands only the fragment D variants competed for the clearance of ¹²⁵I-labeled fragment D₁. Cross-competition was observed when ¹²⁵I-labeled fragment D₁ dimer was cleared in the presence of large molar excesses of fragment D₁. Autopsies demonstrated that injected fragments D₁, D₂, D₃ and D₁ dimer cleared primarily in liver and kidneys. In some clearance studies, livers were perfused with tissue culture fluid, subjected to light microscopic autoradiography, and silver grain counts performed to localize cleared fragment D₁. These experiments indicated that 80% of the liver uptake was in hepatocytes. However, when silver grain counts were normalized for the number of parenchymal and nonparenchymal cells, the distribution of silver grains was essentially identical (1.8 and 1.6 grains per cell, respectively). It is concluded that fragments D₁, D₂, D₃ and D₁ dimer are recognized by a similar clearance pathway. Since neither fibrinogen nor fragment E competed for the clearance of fragment D₁, it is suggested that determinants present in the fragment D domain become exposed after plasmin attack on fibrinogen and are responsible for clearance.     

Phosphane effects on formation and reactivity of [Ru(L)(PR3)(`N2Me2S2')] complexes with L=N2, N2H4, NH3, and CO

Metal-sulfur complex fragments, to which small molecules like N₂, N₂H₂, N₂H₄, NH₃, or CO can bind, are desirable model compounds concerning enzymatic N₂ fixation.This paper reports on the effects of the phosphane co-ligand on formation and reactivity of [Ru(L)(PR₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] [`N₂Me₂S₂'²⁻=1,2-ethanediamine-N,N^′-dimethyl-N,N^′-bis(2-benzenethiolate)(2−)] complexes with nitrogenase relevant ligands, especially N₂, N₂H₄, NH₃, and CO.Treatment of [Ru(NCCH₃)₄Cl₂] with Li₂`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>', excessive LiOMe, bulky PPh<sub>3</sub> or PCy<sub>3</sub>, respectively, led to the formation of two series of [Ru(L)(PR<sub>3</sub>)(`N₂Me₂S₂')] complexes [for R=Ph: 1b, 1c (L=NCCH₃), 6b (L=N₂H₄), 7b (L=N₂), 8b_1-3 (L=CO), 9b (L=NH₃); for R=Cy: 1a (L=NCCH₃), 6a (L=N₂H₄), 7a (L=N₂), 8a (L=CO), 9a (L=NH₃)]. While the use of PPh₃ (θ=145°) yielded cis,trans and cis,cis isomers of [Ru(NCCH₃)(PPh₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] (1b, 1c), no isomer formation was observed with the bulkier phosphane PCy<sub>3</sub> (θ=170°). Sterically less demanding phosphanes (θ=118-132°) afforded bisphosphane complexes [Ru(PR<sub>3</sub>)<sub>2</sub>(`N₂Me₂S₂')] [2d (R=Me), 2e (R=Et), 2f (R=nPr), and 2g (R=nBu)], which were practically inert and could only be converted in two cases and under drastic reaction conditions into the CO complexes [Ru(CO)(PR₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] [4e (R=Et), 4f (R=nPr)]. The chelating bidentate phosphane dppe (bisdiphenylphosphanoethane) yielded exclusively the mononuclear complex [Ru(dppe)(`N₂Me₂S₂')] (3).     

New preparations and molecular structures of cis-MCl2(Ph2PCH2PPh2)2, M = Ru,Os and trans-RuCl2(Ph2PCH2PPh2)2

The title compounds were made by reacting bis(diphenylphosphino)methane (dppm) with reduced solutions of OsCl₆^4? and Ru₂OCl₁₀^4?. The crystal and molecular structures of these compounds have been determined form three-dimensional X-ray study. The cis-isomers crystallize with one CHCl₃ per molecule of the complex. All three compounds crystallize in the monoclinic space group P2₁/n with unit cell dimensions as follows: Cis-OsCl₂(dppm)₂·CHCl₃: a = 13.415(4) Å, b = 22.859(4) Å, c = 16.693(3) Å, β = 105.77(3)°, V = 4926(3) ų, Z = 4. cis-RuCl₂(dppm)₂·CHCl₃: a = 13.442(3) Å, b = 22.833(7) Å, c = 16.750(4) Å, β = 105.53(2)°, V = 4953(3) ų, Z = 4. trans-RuCl₂(dppm)₂: a = 11.368(7) Å, b = 10.656(6) Å, c = 18.832(12) Å; β = 103.90(6)°, V = 2213(7) ų; Z = 2. The structures were refined to R = 0.044 (R_w = 0.055) for cis-OsCl₂(dppm)₂·CHCl₃; R = 0.065 (R_w = 0.079) for cis-RuCl₂(dppm)₂·CHCl₃ and R = 0.028 (R_w = 0.038) for trans-RuCl₂(dppm)₂. The complexes are six coordinate with stable four-membered chelate rings. The PMP angle in the chelate rings is ca. 71° in each case.     

C4 photosynthesis in a single C3 cell is theoretically inefficient but may ameliorate internal CO2 diffusion limitations of C3 leaves

Attempts are being made to introduce C₄ photosynthetic characteristics into C₃ crop plants by genetic manipulation. This research has focused on engineering single‐celled C₄‐type CO₂ concentrating mechanisms into C₃ plants such as rice. Herein the pros and cons of such approaches are discussed with a focus on CO₂ diffusion, utilizing a mathematical model of single‐cell C₄ photosynthesis. It is shown that a high bundle sheath resistance to CO₂ diffusion is an essential feature of energy‐efficient C₄ photosynthesis. The large chloroplast surface area appressed to the intercellular airspace in C₃ leaves generates low internal resistance to CO₂ diffusion, thereby limiting the energy efficiency of a single‐cell C₄ concentrating mechanism, which relies on concentrating CO₂ within chloroplasts of C₃ leaves. Nevertheless the model demonstrates that the drop in CO₂ partial pressure, pCO₂, that exists between intercellular airspace and chloroplasts in C₃ leaves at high photosynthetic rates, can be reversed under high irradiance when energy is not limiting. The model shows that this is particularly effective at lower intercellular pCO₂. Such a system may therefore be of benefit in water‐limited conditions when stomata are closed and low intercellular pCO₂ increases photorespiration.     

Preparation of an unusual fluoroalkyl phosphinoyl chelate complex, {k-P,C,P,k-O-(CF3)2PCH2C6H3CH2P(CF3)O}2Pt2

Electron poor cationic complexes [(^CF₃PCP)Pt(L)]⁺ (where L = CO, NC₅F₅, or acetone) react with H₂O in polar solvents via selective hydrolysis of a single P-CF₃ substituent to afford the spectroscopically-characterized phosphinoyl-bridged complex {k³-P,C,P,k¹-O-(CF₃)₂PCH₂C₆H₃CH₂P(CF₃)O}₂Pt₂ (1) in good yield. X-ray diffraction confirms the presence of a six-member Pt-P-O-Pt-P-O ring in a chair conformation. The presumed intermediate aqua complex, (^CF₃PCP)Pt(H₂O)⁺, is stable in dichloromethane, but when dissolved in more polar solvents readily converts to 1.     

Synthesis, crystal structure and vibrational spectroscopy of a novel mixed ligands Ni(II) pentaborate: [Ni(C4H10N2)(C2H8N2)2][B5O6(OH)4]2

A novel organic-inorganic hybrid pentaborate [Ni(C₄H₁₀N₂)(C₂H₈N₂)₂][B₅O₆(OH)₄]₂ has been synthesized by hydrothermal reaction and characterized by FT-IR, Raman spectroscopy, elemental analyses and DTA-TGA. Its crystal structure was determined from single crystal X-ray diffraction. The structure consists of isolated polyborate anion [B₅O₆(OH)₄]⁻ and nickel complex cation of [Ni(C₄H₁₀N₂)(C₂H₈N₂)₂]²⁺, in which the two kinds of ligands come from the decomposition of triethylenetriamine material. The [B₅O₆(OH)₄]⁻ units are connected to one another through hydrogen bonds, forming a three-dimensional framework with large channel along the a and c axes, in which the templating [Ni(C₄H₁₀N₂)(C₂H₈N₂)₂]²⁺ cations are located. The assignments of the record FT-IR absorption frequencies and Raman shifts were given.     

Dependence of the Post-Illumination Burst of CO2 on Temperature, Light, CO2, and O2 Concentration in Wheat (Triticum aestivum)

The effect of environmental factors on the post-illumination burst of CO₂ (PIB) and O₂ inhibition of apparent photosynthesis (APS) in wheat (Triticum aestivum L.) was studied in an open gas exchange system utilizing the mathematics of non-steady-state systems. Two components of inhibition by O₂ are suggested: one is caused by photorespiration as measured from the maximum rate of the PIB, and the second is direct inhibition as taken as APS_2%O2— (APS_x%O2+ PIB_x%O2) where X is the oxygen concentration. A primary PIB which occurred from 16–28 s after the darkening of the foliage was attributed to photorespiration. No primary PIB was observed at 2% O₂. At a CO₂ concentration of 100 μ/1 in the atmosphere (about 2.5 μM based on leaf intercellular concentration) and at 30°C and 145 nE/cm² nE/cm²·s, APS decreased curve-linearly with increasing O₂ and reached an O₂ compensation point of 560 μM (48% by volume), above which there was a net loss of CO₂ in the light. The PIB increased with increasing O₂ and became saturated at about 500 μM O₂ but decreased above 900 μM O₂. Direct inhibition of photosynthesis by O₂ increased with increasing O₂ concentration. Decreasing CO₂ concentration had an effect on the magnitude of the PIB similar to that of increasing O₂. At 30°C and 21% O₂, the PIB increased with decreasing CO₂ down to the CO₂ compensation point (I) of 1.4 μM (47 μM/l). Below Γ, both PIB and CO₂ evolution into the air in the light (at 21% O₂) increased and then decreased at CO₂ below 0.8 μM. The ratio of the PIB to APS_{2% o} O₂ increased linearly with increasing O₂/CO₂ ratio where O₂ was held constant at 21% and CO₂ was varied from 1.4 to 8.5 μM, while direct inhibition of photosynthesis expressed as a proportion of APS_2%O2 remained constant over this range. At low CO₂ concentration photorespiration as estimated by the PIB is the major part of O₂ photosynthesis, while at atmospheric CO₂ levels, direct inhibition is the major component. The PIB and APS at 2% and 21% O₂ increased hyperbolically with increasing irradiance and all became light-saturated at about 65 nE/cm₂ s. The percentage total O₂ inhibition of photosynthesis remained constant with increasing irradiance as did the relative contribution of direct O₂ inhibition or photorespiration (PIB) to total O₂ inhibition. The PIB and APS at 21% O₂ had similar temperature optima of 30°C when experimental conditions were adjusted to provide a constant internal O₂/CO₂ solubility ratio at varying temperatures. However, with a constant external CO₂ concentration, the temperature optimum for the PIB shifted upward to 35°C while that for APS at 21% O₂ remained at 30°C, which may be due to an increased O₂/CO₂ concentration in the leaf with increasing temperature.     

A new mixed-valence hexanuclear cobalt complex, [Co4Co2(dea)2(Hdea)4)(piv)4](ClO4)2·H2O: Synthesis, crystal structure and magnetic properties

A new Co^II/Co^III hexanuclear complex, [Co₄^IICo₂^III(dea)₂(Hdea)₄)(piv)₄](ClO₄)₂·H₂O 1, has been obtained by reacting cobalt(II) perchlorate, diethanolamine, and pivalic acid (H₂dea = diethanolamine and piv = pivalato anion). The cobalt ions are held together by four μ₃ and four μ₂ alkoxo bridges as well as by four syn-syn carboxylato groups. The hexanuclear motif contains four Co(II) and two Co(III) ions. The {Co^II₄Co^III₂(μ₂-O)₄(μ₃-O)₄} core can be described as a four face-sharing monovacant and bivacant distorted heterocubane units. The cobalt(III) ions are hexacoordinated. Two of the cobalt(II) are hexacoordinated, while the two others are pentacoordinated with a bipyramidal stereochemistry. The magnetic properties of 1 have been investigated in the temperature range 1.9-300 K. Compound 1 exhibits an overall antiferromagnetic behaviour with a ground singlet spin state.     

Immunoaffinity column clean-up for the high-performance liquid chromatographic determination of aflatoxins B1, B2, G1, G2, M1 and Q1 in urine

A method for the determination of aflatoxins B₁, B₂, G₁, G₂, M₁ and Q₁ in human urine has been developed. The 10-ml urine samples were automatically cleaned up on immunoaffinity columns and analysed by high-performance liquid chromatography (HPLC), including post-column derivatization with bromine and fluorescence detection. Average aflatoxin recoveries were: B₁ 103%, B₂ 106%, G₁ 98% and G₂ 96% in the range 6.8–73 pg/ml of urine and M₁ 103% and Q₁ 100% in the range 18–97 pg/ml of urine. The relative standard deviations were all between 1% and 21%. The determination limits of aflatoxins in urine were 6.8 pg/ml for B₁, B₂, G₁ and G₂ and 18 pg/ml for M₁ and Q₁.     

Tris(4-oxy-pyridinium)nitrato lanthanide complexes [M(4-O-C6H4NH)3(NO3)2(H2O)2][NO3] {M = La, Ce, Pr, Nd, Eu, Gd} - Synthesis, properties and structural characterization

Preferential formation and X-ray structures of tris(4-hydroxypyridinium) nitrato complexes [M(4-O-C₆H₄NH)₃(NO₃)₂(H₂O)₂][NO₃] {M = La, Ce, Pr, Nd, Eu, Gd} in the simple reaction of 4-hydroxypyridine with the respective nitrates is described. All these compounds are isostructural and crystallize in the space group P2₁2₁2₁. There are, however, minor differences in the hydrogen bonding features. The central metal ion in all these complexes has a coordination number of nine and the geometry may be described as tricapped trigonal prism. The neodinium complex has a chirality opposite to that of the rest of the structures. TGA data are also consistent with the solid state structures of these compounds.     

The quasi-relativistic Xα-SW molecular orbital method in organo-f-element chemistry: applications to UCl4, (η5-C5H5)4U and (η5-C5H5)2UCl2

The advantages and disadvantages of using the Xα scattered-wave molecular orbital method with quasi-relativistic corrections for the calculation of the electronic structure of organo-f-element compounds is discussed. Application of the method in organouranium chemistry is discussed via comparative calculations on UCl₄, (η⁵-C₅H₅)₄U, and (η⁵-C₅H₅)₂UCl₂. It is found that the η⁵-C₅H₅^? ligand is a better donor to U than is Cl^? and that the valence orbitals of (η⁵-C₅H₅)₂UCl₂ are energetically closer to those of (η⁵-C₅H₅)₄U than UCl₄. The calculational results are in excellent accord with experimental photoelectron spectroscopic studies.     

Photosynthesis, immediate export and carbon partitioning in source leaves of C3, C3-C4 intermediate, and C4Panicum and Flaveria species at ambient and elevated CO2 levels

Immediate export in leaves of C₃‐C₄ intermediates were compared with their C₃ and C₄ relatives within the Panicum and Flaveria genera. At 35 Pa CO₂, photosynthesis and export were highest in C₄ species in each genera. Within the Panicum, photosynthesis and export in ‘type I’ C₃‐C₄ intermediates were greater than those in C₃ species. However, ‘type I’ C₃‐C₄ intermediates exported a similar proportion of newly fixed ¹⁴C as did C₄ species. Within the Flaveria, ‘type II’ C₃‐C₄ intermediate species had the lowest export rather than the C₃ species. At ambient CO₂, immediate export was strongly correlated with photosynthesis. However, at 90 Pa CO₂, when photosynthesis and immediate export increased in all C₃ and C₃‐C₄ intermediate species, proportionally less C was exported in all photosynthetic types than that at ambient CO₂. All species accumulated starch and sugars at both CO₂ levels. There was no correlation between immediate export and the pattern of ¹⁴C‐labelling into sugars and starch among the photosynthetic types within each genus. However, during CO₂ enrichment, C₄Panicum species accumulated sugars above the level of sugars and starch normally made at ambient CO₂, whereas the C₄Flaveria species accumulated only additional starch.     

Synthesis of tantalum and niobium complexes that contain the diamidoamine ligand, [(3,4,5-F3C6H2NCH2CH2)2NMe], and the triamidoamine ligand, [(3,5-Cl2C6H3NCH2CH2)3N]

Several niobium and tantalum compounds were prepared that contain either the diamidoamine ligand, [(3,4,5-F₃C₆H₂NCH₂CH₂)₂NMe]²⁻ ([F₃N₂NMe]²⁻), or the triamidoamine ligand, [(3,5-Cl₂C₆H₃NCH₂CH₂)₃N]³⁻ ([Cl₂N₂NMe]³⁻). The former include [F₃N₂NMe]TaCl₃, [F₃N₂NMe]NbCl₃, [F₃N₂NMe]TaMe₃, [F₃N₂NMe]NbMe₃, [(F₃N₂NMe)TaMe₂][MeB(C₆F₅)₃], [F₃N₂NMe]Ta(CHSiMe₃)(CH₂SiMe₃), [F₃N₂NMe]Ta(CH₂-t-Bu)Cl₂, [F₃N₂NMe]Ta(CH-t-Bu)(CH₃), and [F₃N₂NMe]Ta(η²-C₂H₄)(CH₂CH₃). The latter include [Cl₂N₂NMe]TaCl₂, [Cl₂N₂NMe]TaMe₂, [Cl₂N₂NMe]Ta(η²-C₂H₄), and [Cl₂N₂NMe]Ta(η²-C₂H₂).X-ray diffraction studies were carried out on [F₃N₂NMe]Ta(CHSiMe₃)(CH₂SiMe₃), [F₃N₂NMe]Ta(η²-C₂H₄)(CH₂CH₃), and [Cl₂N₂NMe]TaMe_2..     

Synthesis and crystal structure of bis(tetramethylammonium) aquotetra-fluorodioxouranate(VI) dihydrate, [(CI3)4 N]2[UO2 F4(H2 O)]·2H2O

The title compound has been synthesized and subjected to crystal structure analysis. M_r = 548.50, m.p. 108.1 °C (decom.), orthorhombic, Im2m,a = 7.006(2), b = 8.938(2), c = 13.619(2) Å V = 852.8(3) ų, Z = 2, D_x = 2.136, D_m, (flotation in CCl₄/CH₂I₂) = 2.128 g cm^?3, λ(Mo-Kα) = 0.71069 Å, μ = 90.79 cm^?1, F(000) = 519.89, T = 295 K, final R_F = 0.036 and R_G = 0.044 for 566 observed reflections. The discrete [UO₂F₄(H₂0)]^2? anion has site symmetry m2m, its virtually linear uranyl moiety being surrounded by fluoro and aquo ligands occupying the vertices of a pentagon in the equatorial plane. Watet molecules serve to link the complex anions by hydrogen bonds into layers, between which the organic cations are accommodated.     

Al4(C5Me4H)4: Structure, reactivity and bonding

The synthesis of Al₄R₄ (R = C₅(CH₃)₄H) (3) and the tetrahedral structure in the solid state are described. These results as well as the ²⁷Al NMR spectra of 3 in solution are in line with the data obtained from DFT calculations. These calculations also support the failed observation of a monomeric AlR species in solution. Monomeric and tetrameric molecules of 3 are discussed with respect to those of (AlCp^∗)₄ (1) and (AlCp)₄ (2). The increasing Al-Al bond strength from 1 to 3 and 2 from X-ray data is also supported by structural and energetic results from DFT calculations.     

Effect of prostaglandins A1, A2, B1, B2, E2 and F2α on human umbilical cord vessels

The effect of six naturally occurring prostaglandins on isolated umbilical arteries and veins has been studied. All six prostaglandins had a constricting effect on the umbilical vessels. On the umbilical artery preparations the potencies in decreasing order were A₂>B₂>F_2α>B₁>E₂>A₁. Prostaglandin B₂ was more potent than PGA₂ on the umbilical vein. Polyphloretin phosphate (PPP) antagonised the constricting effect of all six prostaglandins without altering responses to 5-hydroxytryptamine.