Spatial variation of modern pollen in Oregon and southern Washington, USA

Surface sediments from 95 lakes provide information on the spatial variation of modern pollen spectra in Oregon and southern Washington. Percentages for 13 pollen types were compared within and between vegetation zones to characterize regional patterns of pollen spectra. The percentage data were also compared with climate variables to determine relationships between pollen percentages and regional climate gradients. The composition of modern pollen spectra corresponds well with the distribution of the pollen producers. Most pollen assemblages were generally dominated by Pinus, but those west of the Cascade Range were dominated by Alnus. Low percentages of Pseudotsuga/Larix, Tsuga mertensiana, Abies, and Picea pollen coincided with local occurrence of the trees. The distributions of the pollen data were arranged along gradients of temperature and effective moisture. West of the Cascade Range, Alnus, Tsuga heterophylla, Pseudotsuga/Larix, and Cupressaceae pollen were abundant and correlate well with moderate temperature and high effective moisture. In the shrub-steppe and woodlands east of the Cascade Range, where effective moisture is low, Artemisia, Cupressaceae, and Pinus pollen were dominant. At high elevations, Pinus, T. mertensiana, Abies, and Picea were common pollen types in areas with short growing seasons and high effective moisture. Pollen percentages collected from lake surface sediments, moss polsters, and soils were compared within a number of vegetation types to assess their similarity. The three types of sample yielded similar results for forested areas, but lake sediment samples from upper- and lower-treeline sites captured a more regional picture of the vegetation.     

Options for biodiversity conservation in managed forest landscapes of multiple ownerships in Oregon and Washington,USA

We examine existing and developing approaches to balance biodiversity conservation and timber production with the changing conservation roles of federal and nonfederal forest land ownerships in the US Pacific Northwest. At landscape scales, implementation of the reserve-matrix approach of the federal Northwest Forest Plan in 1994 was followed by proposals of alternative designs to better integrate disturbance regimes or to conserve biodiversity in landscapes of predominantly young forests through active management without reserves. At stand scales, landowners can improve habitat heterogeneity through a host of conventional and alternative silvicultural techniques. There are no state rules that explicitly require biodiversity conservation on nonfederal lands in the region. However, state forest practices rules require retention of structural legacies to enhance habitat complexity and establishment of riparian management areas to conserve aquatic ecosystems. Habitat Conservation Plans (HCPs) under the US Endangered Species Act provide regulatory incentives for nonfederal landowners to protect threatened and endangered species. A state-wide programmatic HCP has recently emerged as a multi-species conservation approach on nonfederal lands. Among voluntary incentives, the Forest Stewardship Council certification comprehensively addresses fundamental elements of biodiversity conservation; however, its tough conservation requirements may limit its coverage to relatively small land areas. Future changes in landscape management strategies on federal lands may occur without coordination with nonfederal landowners because of the differences in regulatory and voluntary incentives between ownerships. This raises concerns when potentially reduced protections on federal lands are proposed, and the capacity of the remaining landscape to compensate has been degraded.     

Options for biodiversity conservation in managed forest landscapes of multiple ownerships in Oregon and Washington,USA

We examine existing and developing approaches to balance biodiversity conservation and timber production with the changing conservation roles of federal and nonfederal forest land ownerships in the US Pacific Northwest. At landscape scales, implementation of the reserve-matrix approach of the federal Northwest Forest Plan in 1994 was followed by proposals of alternative designs to better integrate disturbance regimes or to conserve biodiversity in landscapes of predominantly young forests through active management without reserves. At stand scales, landowners can improve habitat heterogeneity through a host of conventional and alternative silvicultural techniques. There are no state rules that explicitly require biodiversity conservation on nonfederal lands in the region. However, state forest practices rules require retention of structural legacies to enhance habitat complexity and establishment of riparian management areas to conserve aquatic ecosystems. Habitat Conservation Plans (HCPs) under the US Endangered Species Act provide regulatory incentives for nonfederal landowners to protect threatened and endangered species. A state-wide programmatic HCP has recently emerged as a multi-species conservation approach on nonfederal lands. Among voluntary incentives, the Forest Stewardship Council certification comprehensively addresses fundamental elements of biodiversity conservation; however, its tough conservation requirements may limit its coverage to relatively small land areas. Future changes in landscape management strategies on federal lands may occur without coordination with nonfederal landowners because of the differences in regulatory and voluntary incentives between ownerships. This raises concerns when potentially reduced protections on federal lands are proposed, and the capacity of the remaining landscape to compensate has been degraded. This paper was previously published in Biodiversity and Conservation, Volume 16(13) under doi:     

Disturbance and climate effects on carbon stocks and fluxes across Western Oregon USA

We used a spatially nested hierarchy of field and remote‐sensing observations and a process model, Biome‐BGC, to produce a carbon budget for the forested region of Oregon, and to determine the relative influence of differences in climate and disturbance among the ecoregions on carbon stocks and fluxes. The simulations suggest that annual net uptake (net ecosystem production (NEP)) for the whole forested region (8.2 million hectares) was 13.8 Tg C (168 g C m^?2 yr^?1), with the highest mean uptake in the Coast Range ecoregion (226 g C m^?2 yr^?1), and the lowest mean NEP in the East Cascades (EC) ecoregion (88 g C m^?2 yr^?1). Carbon stocks totaled 2765 Tg C (33 700 g C m^?2), with wide variability among ecoregions in the mean stock and in the partitioning above‐ and belowground. The flux of carbon from the land to the atmosphere that is driven by wildfire was relatively low during the late 1990s (～0.1 Tg C yr^?1), however, wildfires in 2002 generated a much larger C source (～4.1 Tg C). Annual harvest removals from the study area over the period 1995–2000 were ～5.5 Tg C yr^?1. The removals were disproportionately from the Coast Range, which is heavily managed for timber production (approximately 50% of all of Oregon's forest land has been managed for timber in the past 5 years). The estimate for the annual increase in C stored in long‐lived forest products and land fills was 1.4 Tg C yr^?1. Net biome production (NBP) on the land, the net effect of NEP, harvest removals, and wildfire emissions indicates that the study area was a sink (8.2 Tg C yr^?1). NBP of the study area, which is the more heavily forested half of the state, compensated for ～52% of Oregon's fossil carbon dioxide emissions of 15.6 Tg C yr^?1 in 2000. The Biscuit Fire in 2002 reduced NBP dramatically, exacerbating net emissions that year. The regional total reflects the strong east–west gradient in potential productivity associated with the climatic gradient, and a disturbance regime that has been dominated in recent decades by commercial forestry.     

Woody riparian plant distributions in western Oregon,USA: comparing landscape and local scale factors

We studied riparian forests along mountain streams in four large watersheds of western Oregon and far northern California, USA, to better understand the multiscale controls on woody riparian vegetation in a geographically complex region. In each of the four-study watersheds, we sampled woody riparian vegetation in161-ha sampling reaches that straddled the stream channel. Within each hectare, we sampled riparian vegetation and local environmental factors in 40 m² sampling plots arrayed along topographic transects. We also surveyed natural disturbance gaps in 6 ha in each watershed to explore the effects of fine scale disturbance on species distributions. We compared species composition across our study watersheds and used Nonmetric Multidimensional Scaling (NMS) and chi-squared analyses to compare the relative importance of landscape scale climate variables and local topographic and disturbance variables in explaining species distributions at sampling plot and hectare scales. We noted substantial turnover in the riparian flora across the region, with greatest numbers of unique species in watersheds at the ends of the regional gradient. In NMS ordinations at both scales, variation in woody riparian species composition showed strongest correlations with climatic variables and Rubus spectabilis cover, but the latter was only an important factor in the two northern watersheds. At the smaller scale, topographic variables were also important. Chi-squared analyses confirmed that more species showed landscape scale habitat preferences (watershed associations) than associations with topographic position (94.7% vs. 42.7% of species tested) or gap versus forest setting (94.7% vs. 24.6% of species tested). The woody riparian flora of western Oregon shows important biogeographic variation; species distributions showed strong associations with climatic variables, which were the primary correlates of compositional change between riparian sites at both scales analyzed. Additional local variation in composition was explained by measures of topography and disturbance.     

Probabilistic modeling and mapping of plant indicator species in a Northeast Oregon industrial forest,USA

Managing forest ecosystems for sustainable, multiple use requires forest resource managers to understand and predict how plant species composition and distribution varies across environmental gradients and responds to landscape scale disturbances. This study demonstrates predictive vegetation modeling and mapping for a Northeast Oregon forest using non-parametric Multiplicative Regression (NPMR) with presence/absence data for the species Clintonia uniflora (CLUN) and a set of stand structural and raster-based predictor variables. NPMR is a flexible probability modeling system that can find the best subset of habitat factors influencing species occurrence. NPMR was compared with logistic regression (LR) by building reduced models from variables selected as best by NPMR and full models from variables identified as significant with a forward stepwise process and further manual testing. log β was used to select models with the highest predictive capability. NPMR models were less complex and had higher predictive capability than LR for all modeling approaches. Spatial coordinates were among the most powerful predictors and the modeling approach with physiographic and stand structural variables together was the most improved relative to the average frequency of occurrence. GIS probability maps produced with the application of the physiographic models showed good spatial congruence between high probability values and plots that contained CLUN. NPMR proved to be a reliable probability modeling and mapping tool that could be used as the analytical link between monitoring and quantifying the status and trends of vegetation resources.     

Humptulips revisited: a revised interpretation of Quaternary vegetation and climate of western Washington, USA

New pollen data from a 770-cm core of a mire at Humptulips on the southwestern Olympic Peninsula (47°17′00″N, 123°54′40″W) and from a nearby deposit regarded as interglacial in age on the West Fork of the Humptulips River provide evidence for a reinterpretation of previous accounts of the Quaternary vegetation and climate. Using a new age model, the highly variable record at Humptulips is here correlated with marine oxygen-isotope stages (OIS) 1–5a. Vegetation during OIS 5a was pine-dominated, mixed woodland and tundra. In OIS 4, 3, and 2, oscillations in pollen assemblages imply repeated intervals of mountain hemlock parkland and tundra. Pine, as an indicator of openness, is also abundant in these stages. Interstadial fluctuations in OIS 3 reflect episodes of lowland western hemlock communities. The earliest of the episodes is of infinite radiocarbon age and the latest dates to approximately 30,000 ¹⁴C yr B.P. Parkland in OIS 2, occurring after 24,600 until at least 18,440 ¹⁴C yr B.P., was replaced by transitional pine–alder in OIS 1 (Holocene), which, unlike any of the earlier stages, conveys the development of modern lowland forest dominated by western hemlock. Pollen assemblages over the length of record imply that temperature and humidity at no time were as high as at present; only in OIS 3 do conditions approach those occurring in OIS 1. During OIS 2, 3, and 4, when tree line apparently stood at the location of the site, climate was colder and drier. Temperatures were depressed an estimated ≥5°C with precipitation close to 1000 mm compared with 2000–3000 mm at present. Atmospheric circulation during OIS 2 appears to have been much controlled by the location of the Laurentide ice sheet in the continental interior, whereas under the current climatic regime beginning in the early Holocene, westerly air flow has dominated, regulated by interplay between the North Pacific high in summer and the wintertime Aleutian low.     

Distribution and abundance of zooplankton populations in Crater Lake,Oregon

The zooplankton assemblages in Crater Lake exhibited consistency in species richness and general taxonomic composition, but varied in density and biomass during the period between 1988 and 2000. Collectively, the assemblages included 2 cladoceran taxa and 10 rotifer taxa (excluding rare taxa). Vertical habitat partitioning of the water column to a depth of 200 m was observed for most species with similar food habits and/or feeding mechanisms. No congeneric replacement was observed. The dominant species in the assemblages were variable, switching primarily between periods of dominance of Polyarthra-Keratella cochlearis and Daphnia. The unexpected occurrence and dominance of Asplanchna in 1991 and 1992 resulted in a major change in this typical temporal shift between Polyarthra-K. cochlearis and Daphnia. Following a collapse of the zooplankton biomass in 1993 that was probably caused by predation from Asplanchna, Kellicottia dominated the zooplankton assemblage biomass between 1994 and 1997. The decline in biomass of Kellicottia by 1998 coincided with a dramatic increase in Daphnia biomass. When Daphnia biomass declined by 2000, Keratella biomass increased again. Thus, by 1998 the assemblage returned to the typical shift between Keratella-Polyarthra and Daphnia. Although these observations provided considerable insight about the interannual variability of the zooplankton assemblages in Crater Lake, little was discovered about mechanisms behind the variability. When abundant, kokanee salmon may have played an important role in the disappearance of Daphnia in 1990 and 2000 either through predation, inducing diapause, or both. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Projected latitudinal and regional changes in vascular plant diversity through climate change: short-term gains and longer-term losses

A simple approach is suggested to project potential changes in the diversity of vascular plants. We use the current (recent past) relationship between plant diversity and geographic variation in the climate, as well as elevation range, to project changes in regional species richness (at 100 × 100 km resolution), concentrating on six climate scenarios for 2020, 2050 and 2080. The results show an overall trend towards increased vascular plant species richness. Increases in richness by 2050 and 2080 are expected over approximately three-quarters of the land surface, but decreases are expected in other regions. The magnitudes of richness gains and losses both increase over time, as the level of warming grows. The latitudinal pattern of change suggests that richness increases will be greatest at high latitudes, where plant productivity and diversity are largely limited by temperature. Richness decreases are not projected consistently in any latitudinal band, but are most likely to be observed at 5–40ºN, where declines in precipitation drive most projected decreases in richness.     

Potential for detecting changes in soil organic carbon concentrations resulting from climate change

The interaction between soil organic carbon pools and climate change is an important determinant of future atmospheric CO₂ concentrations. Much effort has so far been allocated to manipulative process studies and predictive modelling exercises. Here, we examine the potential for directly detecting predicted changes through repeated soil sampling. Two contrasting benchmark plots were selected in the steppe at the Russian–Mongolian border, where soil organic carbon losses are predicted to be around 10% over the first 50 years of climate change. In both plots, 50 samples were taken to 20 and 30 cm depths. The estimated time intervals before re‐sampling by the same method that were likely to prove significant soil organic carbon losses (α=0.05; statistical power=0.90) were 43 and 26 years.     

Genecology of Douglas fir in western Oregon and Washington

BACKGROUND AND AIMS: Genecological knowledge is important for understanding evolutionary processes and for managing genetic resources. Previous studies of coastal Douglas fir (Pseudotsuga menziesii var. menziesii) have been inconclusive with respect to geographical patterns of variation, due in part to limited sample intensity and geographical and climatic representation. This study describes and maps patterns of genetic variation in adaptive traits in coastal Douglas fir in western Oregon and Washington, USA. METHODS: Traits of growth, phenology and partitioning were measured in seedlings of 1338 parents from 1048 locations grown in common gardens. Relations between traits and environments of seed sources were explored using regressions and canonical correlation analysis. Maps of genetic variation as related to the environment were developed using a geographical information system (GIS). KEY RESULTS: Populations differed considerably for adaptive traits, in particular for bud phenology and emergence. Variation in bud-set, emergence and growth was strongly related to elevation and cool-season temperatures. Variation in bud-burst and partitioning to stem diameter versus height was related to latitude and summer drought. Seedlings from the east side of the Washington Cascades were considerably smaller, set bud later and burst bud earlier than populations from the west side. CONCLUSIONS: Winter temperatures and frost dates are of overriding importance to the adaptation of Douglas fir to Pacific Northwest environments. Summer drought is of less importance. Maps generated using canonical correlation analysis and GIS allow easy visualization of a complex array of traits as related to a complex array of environments. The composite traits derived from canonical correlation analysis show two different patterns of variation associated with different gradients of cool-season temperatures and summer drought. The difference in growth and phenology between the westside and eastside Washington Cascades is hypothesized to be a consequence of the presence of interior variety (P. menziessii var. glauca) on the eastside.     

Diurnal cortisol rhythms among Latino immigrants in Oregon, USA

ABSTRACT: One of the most commonly used stress biomarkers is cortisol, a glucocorticoid hormone released by the adrenal glands that is central to the physiological stress response. Free cortisol can be measured in saliva and has been the biomarker of choice in stress studies measuring the function of the hypothalamic-pituitary-adrenal axis. Chronic psychosocial stress can lead to dysregulation of hypothalamic-pituitary-adrenal axis function and result in an abnormal diurnal cortisol profile. Little is known about objectively measured stress and health in Latino populations in the United States, yet this is likely an important factor in understanding health disparities that exist between Latinos and whites. The present study was designed to measure cortisol profiles among Latino immigrant farmworkers in Oregon (USA), and to compare quantitative and qualitative measures of stress in this population. Our results indicate that there were no sex differences in average cortisol AUCg (area under the curve with respect to the ground) over two days (AvgAUCg; males = 1.38, females = 1.60; p = 0.415). AUCg1 (Day 1 AUCg) and AvgAUCg were significantly negatively associated with age in men (p < 0.05). AUCg1 was negatively associated with weight (p < 0.05), waist circumference (p < 0.01) and waist-to-stature ratio (p < 0.05) in women, which is opposite to the expected relationship between cortisol and waist-to-stature ratio, possibly indicating hypothalamic-pituitary-adrenal axis dysregulation. Among men, more time in the United States and immigration to the United States at older ages predicted greater AvgAUCg. Among women, higher lifestyle incongruity was significantly related to greater AvgAUCg. Although preliminary, these results suggest that chronic psychosocial stress plays an important role in health risk in this population. (271 words).     

Emergence patterns of Plecoptera in a stream in Oregon, USA

Forty-three species of Plecoptera were collected from emergence traps in an Oregon woodland stream. Adults occurred during every month of the year, but the largest numbers and most species emerged from April to June. Temporal separation of con-generic species occurred within the suborder of Filipalpia, but not in Setipalpia. Some species of Nemoura had split emergence periods. The onset of emergence for a species from year to year generally varied by less than 2 weeks. Peak emergence occurred at least 1-2 weeks after the start ofthe emergence period.     

High-resolution bioclimatic dataset derived from future climate projections for plant species distribution modeling

Species distribution modeling is playing an increasingly prominent role in ecology and global change biology, owing to its potential to predict species range shifts, biodiversity losses, and biological invasion risks for future climates. Such models are now well-established as important tools for biological conservation. However, the lack of high-resolution data for future climate scenarios has seriously limited their application, particularly because of the scale gap between general circulation models (GCMs) and species distribution models (SDMs). A recently introduced change-factor downscaling technique provides a convenient way to build high-resolution datasets from GCM projections. Here, we present a high-resolution (10’ × 10’) global bioclimatic dataset (BioPlant) for plant species distribution. The 15 bioclimatic variables we select are considered those most eco-physiologically relevant. They can be easily calculated from climatic variables common to all GCM projections. In addition to the traditional classes of variables regarding temperature and precipitation, the BioPlant dataset emphasizes the interactions between temperature and precipitation, particularly within plant growing seasons. A preliminary visual analysis shows that variations among GCMs are more significant on a species range scale than on a global scale. Thus, the formerly advocated ensemble modeling method should be applied not only to different SDMs, but also to various GCMs. Statistic analysis suggests that divergent behavior among GCM variations for temperature class variables and classes of precipitation variables requires special attention. Our dataset may provide a common platform for ensemble modeling, and can serve as an example to develop higher-resolution regional datasets.     

Exploring the relationship between macrofungi diversity, abundance, and vascular plant diversity in semi-natural and managed forests in north-east Hungary

The diversity of easy-to-study organisms (e.g. vascular plants) is often used as a proxy for the diversity of other organisms whose investigation needs more effort, time and specialist knowledge. Some previous studies have found positive relationships between plant and macrofungal diversity and thus support this approach, while others question this practice. Our aim was to explore the possibility of using plant diversity as surrogate for macrofungal diversity in the forests of the Pannonian ecoregion. A total of 19 permanent plots in north-east Hungary were sampled for vascular plants and macrofungi. The effect on macrofungal abundance and diversity, as well as degradation level, of plant evenness and richness was tested using generalized linear models. Species richness of macrofungi assemblages proved to be independent of the diversity and naturalness of vascular plant communities; however, there was congruence in the composition of the two communities. In contrast to diversity, macrofungi abundance was significantly negatively correlated to plant species richness. There was a hump-backed relationship between the abundance of terricolous macrofungi and the degradation level estimated on the basis of the occurrence of vascular plants, although degradation did not influence the abundance of lignicolous macrofungi. Our results question the reliability of decisions on nature conservation actions based on a few groups of easy-to-observe organisms, and underline the necessity of studying as wide a range of taxonomic groups as possible.     

Fish habitat use response to anthropogenic induced changes of physical processes in the Elwha estuary, Washington, USA

The Elwha River estuary has been significantly influenced by anthropogenic changes to the river, including two large dams upriver and rock dikes installed in the estuary. Together these have disrupted hydrodynamic processes and subsequent sediment delivery throughout the watershed. This article defines the functional response of fish distribution within the estuary as a result of these changes. We assessed fish distribution of three main areas of the Elwha estuary using standard beach seining techniques from March to August 2007. Species composition, ecological indices, and relative proportion of all salmonids, and in particular Chinook salmon (Oncorhynchus tshawytscha), were consistently significantly different across the estuary. Differences corresponded to a rock dike installed 30 years ago, and a sediment lens that was observed to form at the entrance to the east estuary. Sediment lenses are documented to be a common occurrence in the Elwha nearshore, and symptomatic of documented, severely disrupted sediment processes of the Elwha River. Combining the fish distribution documented in this study with the rock dike and observed sediment lens and the sediment processes documented by other researchers we, therefore, conclude: (1) Fish use within the Elwha River estuary is complex, and even fragments of connected estuary are critically important for migrating salmon; (2) Anthropogenic effects, including in river damming and diking of the estuary, can be an important ecological driver in nearshore habitat function that should be appropriately considered in estuary habitat research, management, and restoration; and (3) Juvenile salmonids appear to be able to respond to dynamic sediment environments if there are habitat options available.