New Species of Eimeria (Protozoa: Eimeriidae) from Malaysian Rats*

SYNOPSIS. Four new species of Eimeria were found in a survey of 255 rats of 14 species in Malaysia. E. tikusi n. sp. and E. edwardsi n. sp. are described from Edwards' rat Rattus edwardsi. The ellipsoidal, single-layered oocysts of E. tikusi average 30.3 by 24.4 μ. A micropyle is absent; a polar granule is present. Ovoid sporocysts average 14.2 by 9.8 μ. A sporocyst residuum and Stieda body are present. The ovoid, 2-layered oocysts of E. edwardsi average 29.1 by 21.8 μ. A micropyle is present; a polar granule is absent. Ellipsoidal to ovoid sporocysts average 14.5 by 6.5 μ. A sporocyst residuum is present; Stieda body is small or absent. E. surifer n. sp. is described from the red spiny rat Rattus surifer. Its ellipsoidal 3-layered oocysts average 34.7 by 24.8 μ. A micropyle is absent; a polar granule is present. The ellipsoidal sporocysts average 15.4 by 9.5 μ. A sporocyst residuum, Stieda body and sub-Stieda body are present. E. sabani n. sp. is described from the long-tailed giant rat R. sabanus. Its ellipsoidal 2-layered oocysts average 28.5 by 21.7 μ. A micropyle is absent; a polar granule is present. The ellipsoidal-to-ovoid sporocysts average 11.9 by 8.0 μ. A sporocyst residuum and Stieda body are present.     

Elicitor-specific induction of one member of the chitinase gene family in Arachis hypogaea

Summary Chitinases are believed to play an important role in plant defence against bacterial and fungal attack. In peanut (Arachis hypogaea) chitinase genes form a small multigene family. Four chitinase cDNAs (chit 1–4) were isolated from cultured peanut cells. Expression of individual chit genes was assayed by the polymerase chain reaction (PCR) followed by analysis of restriction fragment length polymorphisms (RFLP). UV irradiation, dilution of cell cultures and treatment with Phytophthora megasperma (Pmg) elicitor or yeast extract were used to induce expression of chit genes. The chit 3 gene is constitutively expressed at a low level in untreated as well as in treated cultures; the expression of chit 4 gene is induced by each of the stimuli tested, whereas the chit 1 gene is activated by cell culture dilution and by yeast extract treatment. The chit 2 gene is strongly activated by treatment with cell wall components from the fungus Phytophthora megasperma but not by the other stimuli. These results indicate that chit 2 gene expression may be controlled by pathogen-specific regulatory elements.     

Genetic basis of microbial carotenogenesis

The synthesis of carotenoids begins with the formation of a phytoene from geranylgeranyl pyrophosphate, a well conserved step in all carotenogenic organisms and catalyzed by a phytoene synthase, an enzyme encoded by the crtB (spy) genes. The next step is the dehydrogenation of the phytoene, which is carried out by phytoene dehydrogenase. In organisms with oxygenic photosynthesis, this enzyme, which accomplishes two dehydrogenations, is encoded by the crtP genes. In organisms that lack oxygenic photosynthesis, dehydrogenation is carried out by an enzyme completely unrelated to the former one, which carries out four dehydrogenations and is encoded by the crtI genes. In organisms with oxygenic photosynthesis, dehydrogenation of the phytoene is accomplished by a ζ-carotene dehydrogenase encoded by the crtQ (zds) genes. In many carotenogenic organisms, the process is completed with the cyclization of lycopene. In organisms exhibiting oxygenic photosynthesis, this step is performed by a lycopene cyclase encoded by the crtL genes. In contrast, anoxygenic photosynthetic and non-photosynthetic organisms use a different lycopene cyclase, encoded by the crtY (lyc) genes. A third and unrelated type of lycopene β-cyclase has been described in certain bacteria and archaea. Fungi differ from the rest of non-photosynthetic organisms in that they have a bifunctional enzyme that displays both phytoene synthase and lycopene cyclase activity. Carotenoids can be modified by oxygen-containing functional groups, thus originating xanthophylls. Only two enzymes are necessary for the conversion of β-carotene into astaxanthin, using several ketocarotenoids as intermediates, in both prokaryotes and eukaryotes. These enzymes are a β-carotene hydroxylase (crtZ genes) and a β-carotene ketolase, encoded by the crtW (bacteria) or bkt (algae) genes. Electronic Publication     

Photoperiodic Control of Developmental Diapause in Nymphs of Prostriate Ixodid Ticks (Acari: Ixodidae)

Extrinsic control of developmental diapause in nymphs of prostriate ticks of the subgenus Ixodes sensu stricto (Ixodes ricinus and Ixodes persulcatus from Eurasia and Ixodes scapularis from North America) appears to be based on a complex two-step photoperiodic reaction of a short-day/long-day type. Diapause control in the subgenus Afrixodes (the South African tick Ixodes rubicundus) appears to be based on a simple long-day reaction. The option between non-diapause development and diapausing arrest in engorged nymphs is determined by both pre- and post-feeding photoperiodic regimes. Consequently diapausing arrest in engorged nymphs of Ixodes sensu stricto can be induced either by a short-day (after their engorgement) or by a long-day regime (in unfed nymphs), while active, non-diapause development is possible only when the short-day pre-feeding regime is followed by a long-day post-feeding regime. The photoperiodic response in I. (Afrixodes) rubicundus nymphs seems to be of the long-day type both before and after feeding. Consequently this non-diapause development is enabled by a long-day regime, while diapause is induced by a short-day regime of exposure. Nevertheless, there are some indications that the control of nymphal diapause in the latter species is also of a complex nature. This revised version was published online in July 2006 with corrections to the Cover Date.     

Role of Pseudomonas fluorescens and INA against Black Rot of Cabbage

Cabbage (Brassica oleracea var. capitata) is an important vegetable crop among crucifers. It is affected by a bacterial disease known as black rot. Black rot is caused by Xanthomonas campestris pv. campestris a disease of worldwide importance. The present study highlights the effect of biotic inducer—Pseudomonas fluorescens—and an abiotic inducer—2,6‐dichloro‐isonicotinic acid—in combating black rot, followed by their effect on the seed treatment and disease incidence, role of antioxidant enzymes followed by validation of the defence‐related genes by quantitative real‐time PCR. The resistant (Pusa mukta) and the highly susceptible (NBH boss) cabbage cultivars were analysed for defence‐related enzymes such as peroxidase and superoxide dismutase. An increase in total peroxidase and superoxide dismutase activity was observed upon inoculation with X. campestris pv. campestris. The activity was greater in resistant cultivar when compared to susceptible ones. Both enzyme activity assays and qPCR analyses for the expression of the defence genes in susceptible and resistant cultivars demonstrated that the peroxidase gene was up‐regulated in resistant cultivar compared to susceptible cultivar. The present study proved that P. fluorescens‐induced resistance against X. campestris pv. campestris in cabbage seedlings is more efficient as compared to the use of INA—abiotic inducer.     

Nutrient content of the aquatic macrophytesElodea canadensis andCeratophyllum in the course of the year

Summary In Lake Vechten, a sandpit near the city of Utrecht (The Netherlands), the submerged macrophyte vegetation is dominated by two species, namelyCeratophyllum demersum andElodea canadensis. In the course of the year both species are able to develop two distinct forms: the normal vegetative form in summer, the dormant form in winter.Elodea is anchored to the substrate by roots,Ceratophyllum by modified leaves, called rhizoids by GLÜCK (1906, 1911). Both species form distinct zones. The depth at which the plants occur abundantly is 0 to 3 m in the case ofElodea and from 3 to 5 forCeratophyllum.     

Cloning and molecular characterisation of the amdR controlled gatA gene of Aspergillus nidulans

Summary The gamma-amino-n-butyrate transaminase gene (gatA) of Aspergillus nidulans is one of several genes under positive control by the regulatory gene amdR (also called intA). The gatA gene has been cloned from a cosmid library by complementation of a gatA mutation. The sequence of a 2.6 kb genomic fragment containing gatA has been determined. An open reading frame of 1497 bp within this sequences is interrupted by three putative introns and predicts a protein of 55 kDa. Northern analysis confirms control of gatA RNA levels by amdR and also indicates that gatA is not strongly regulated by areA-mediated nitrogen metabolite repression. A. nidulans transformants containing multiple copies of a plasmid carrying an 88 bp fragment from the 5 untranscribed region of gatA grew poorly on substrates whose utilisation is dependent on genes controlled by amdR. This indicated titration of limiting amounts of the amdR gene product by this 88 bp fragment. Comparison of this sequence with the 5 region of the coregulated gene, amdS, reveals probable sites of action for the amdR protein.     

Ultrastructure of the lycophora larva of Gyrocotyle urna (Cestoda,Gyrocotylidea)

Summary The ultrastructure of the protonephridial system of the lycophore larva of Gyrocotyle urna Grube and Wagener, 1852, is described. It consists of six terminal cells, at least two proximal canal cells, two distal canal cells and two nephridiopore cells. The terminal cells and the proximal canal cell build up the filtration weir with its two circles of weir rods. The proximal canal cell constitutes a solid, hollow cylinder without a cell gap and desmosome. The distal canal cell is characterized by a strong reduction of the canal lumen by irregularly shaped microvilli. The nephridiopore region is formed by a nephridiopore cell; its cell body is located at some distance proximally within the larva. The connection among different canal cells is brought about by septate desmosomes. Morphological, evolutionary and functional aspects of the protonephridial system within Platyhelminthes are discussed. The structure of the proximal canal cells without a desmosome is considered an autapomorphy of Cestoda.Abbreviations ci cilia of the terminal cell - Co distal canal cell - col lumen of the distal canal cell - Ep epidermis - er outer rods of the filtration weir - il inner leptotriches - ir inner rods of the filtration weir - ld lipid droplets - mt microtubule - mv microvilli - Nc nephridiopore cell - Ne neodermis anlage cells - nu nucleus - pC proximal canal cell - ro ciliary rootlets - sd septate desmosome - Tc terminal cell     

Coformational aspects of polypeptide structure XL. The synthesis of poly((S)-thiazolidine-4-carboxylic acid)

The synthesis of poly[(S)-thiazolidine-4-carboxylic acid] is described. The polymer is obtained by the polymerization of the N-carboxyanhydride of (S)-thiazolidine-4-carboxylic acid in pyridine or nitrobenzene using triethylamine as an initiator. The amino acid is prepared by the condensation of cysteine and formaldehyde. N-Acetyl-(S)-thiazolidine-4-carboxylic acid methyl ester is also prepared as a model compound by standard acetylation and esterification reactions.     

A new species of Tunga perforating the osteoderms of its armadillo host in Argentina and redescription of the male of Tunga terasma

A new species of Tunga (Siphonaptera: Tungidae) collected from armadillos in Argentina is described. The new species is characterized by large and pigmented eyes, the presence of two bristles on antennal segment II, two bristles at the base of the maxilla, and a discoid neosome compressed anteroposteriorly. The gravid female is located in the carapace of the host, perforating the osteoderms. The new species resembles Tunga penetrans and Tunga terasma in general appearance. However, it differs by the greater anteroposterior compression of the neosome, a more angular head, and a manubrium with a pointed proximal end and convex ventral margin (the proximal end of the manubrium is rounded or slightly pointed in T. terasma, and the ventral margin is straight in both T. penetrans and T. terasma). In addition, specimens of T. penetrans have more bristles in antennal segments II and III, and lack bristles in the posterior tibia. This is the first report of a species of Tunga perforating the osteoderms of its host and thereby showing a high degree of specialization. Tunga terasma is recorded for the first time in Argentina; the male is described again and the characteristics of the species amended. This information may be useful in epidemiological studies of diseases caused by species of Tunga.     

Morphology of gametes in sea urchins from Peter The Great Bay,Sea of Japan

The fine structure of the gametes in six sea urchin species of the Sea of Japan was studied. The sperm in Strongylocentrotus nudus, S. intermedius, Echinocardium cordatum, Scaphechinus mirabilis, Sc. griseus and Echinarachnius parma are species-specific. The conical head and symmetrically disposed ring-shape mitochondrion are common to regular sea urchin sperm cells. S. nudus is characterized by the bulb-shaped head of the sperm; S. intermedius, by a bullet-shaped one. The sperm spearhead and small amount of post-acrosome material are common to irregular sea urchins; the sperm width: length ratio varies for different species, with the highest for Sc. mirabilis. The sperm of Sc. griseus is characterized by two lipid drops in the middle part of sperm. Asymmetrical mitochondrion disposal is usual for E. parma. Actin filaments are found in the postacrosome material in the sperm of heart-shaped sea urchins. The differences in the fine structure of sperm in cosmopolitan species Ech. cordatum inhabiting the Sea of Japan and coastal areas of the Northeast Atlantic may bear record to the complex existence of species Ech. cordatum. The fine structure of sperm is unique for each of the studied families, Strongylocentrotidae, Scutellidae, and Loveniidae. The eggs of all the species are characterized by vitelline and jelly-like membranes. The vitelline membrane is formed by cytoplasm protrusions; the area between them is filled with fibrillar material. The jelly-like membrane is formed by fibrillar material associated with apical parts of microvilli of the vitelline membrane. The irregular sea urchins Sc. griseus, Sc. mirabilis and E. parma are characterized by chromatophores situated in the jelly-like membrane, with the highest abundance in Sc. mirabilis.     

Biology and epidemics of Candidatus Liberibacter species,psyllid‐transmitted plant‐pathogenic bacteria

Candidatus Liberibacter species are Gram‐negative bacteria that live as phloem‐limited obligate parasites in plants, and are associated with several plant diseases. These bacteria are transmitted by insects called psyllids, or jumping plant lice, which feed on plant phloem sap. Citrus huanglongbing (yellow shoot) or citrus greening disease is associated with three different species of Ca. Liberibacter – Ca. L. asiaticus, Ca. L. africanus and Ca. L. americanus – all originally found on different continents. Ca. L. asiaticus is the most severe pathogen, spread by Asian citrus psyllid Diaphorina citri and causing devastating epidemics in several countries. Ca. L. africanus occurs in Africa where it is spread by the African citrus psyllid Trioza erytreae. Ca. Liberibacter solanacearum is associated with diseases in several solanaceous plants, and transmitted by potato psyllid Bactericera cockerelli. Zebra chip disease is causing large damage in potato crops in North America. In Europe Ca. Liberibacter solanacearum is associated with diseases of the Apiaceae family of plants, carrot and celery, and transmitted by psyllids Trioza apicalis and Bactericera trigonica. When Ca. Liberibacter is suspected as the disease agent, the diagnosis is confirmed by DNA‐based detection methods. Ca. Liberibacter‐associated plant diseases can be controlled by using healthy plant propagation material, eradicating symptomatic plants, and by controlling the psyllid populations spreading the disease.     

The Degree and Length of O-Glycosylation of Recombinant Proteins Produced in Pichia pastoris Depends on the Nature of the Protein and the Process Type

The methylotrophic yeast Pichia pastoris is known as an efficient host for the production of heterologous proteins. While N-linked protein glycosylation is well characterized in P. pastoris there is less knowledge of the patterns of O-glycosylation. O-glycans produced by P. pastoris consist of short linear mannose chains, which in the case of recombinant biopharmaceuticals can trigger an immune response in humans. This study aims to reveal the influence of different cultivation strategies on O-mannosylation profiles in P. pastoris. Sixteen different model proteins, produced by different P. pastoris strains, are analyzed for their O-glycosylation profile. Based on the obtained data, human serum albumin (HSA) is chosen to be produced in fast and slow growth fed batch fermentations by using common promoters, P_GAP and P_AOX1. After purification and protein digestion, glycopeptides are analyzed by LC/ESI-MS. In the samples expressed with P_GAP it is found that the degree of glycosylation is slightly higher when a slow growth rate is used, regardless of the efficiency of the producing strain. The highest glycosylation intensity is observed in HSA produced with P_AOX1. The results indicate that the O-glycosylation level is markedly higher when the protein is produced in a methanol-based expression system.     

Sequence and Phylogenetic Analysis of SSU rRNA Gene of Five Microsporidia

The complete small subunit rRNA (SSU rRNA) gene sequences of five microsporidia including Nosema heliothidis, and four novel microsporidia isolated from Pieris rapae, Phyllobrotica armta, Hemerophila atrilineata, and Bombyx mori, respectively, were obtained by PCR amplification, cloning, and sequencing. Two phylogenetic trees based on SSU rRNA sequences had been constructed by using Neighbor-Joining of Phylip software and UPGMA of MEGA4.0 software. The taxonomic status of four novel microsporidia was determined by analysis of phylogenetic relationship, length, G+C content, identity, and divergence of the SSU rRNA sequences. The results showed that the microsporidia isolated from Pieris rapae, Phyllobrotica armta, and Hemerophila atrilineata have close phylogenetic relationship with the Nosema, while another microsporidium isolated from Bombyx mori is closely related to the Endoreticulatus. So, we temporarily classify three novel species of microsporidia to genus Nosema, as Nosema sp. PR, Nosema sp. PA, Nosema sp. HA. Another is temporarily classified into genus Endoreticulatus, as Endoreticulatus sp. Zhenjiang. The result indicated as well that it is feasible and valuable to elucidate phylogenetic relationships and taxonomic status of microsporidian species by analyzing information from SSU rRNA sequences of microsporidia.     

Ecology of a paramo cushion mire

Abstract. The vegetation ecology of a paramo cushion mire was studied along four transects. Six local vegetation types were distinguished. Two types are called cushion bogs; one is dominated by Oreobolus cleefii and the other by Plantago rigida. Types 3 and 4 are mire vegetation dominated by bryophytes; one is characterised by Sphagnum sparsum, Breutelia sp. and Campylopus cucullatifolius, the other one is dominated by Lophozia subinflata with Cortaderia sericantha. Vegetation type 5 is dominated by submerged Sphagnum cyclophyllum; type 6 refers to aquatic vegetation with only Equisetum bogotense and algae. The relation between the first four vegetation types and edaphical and hydrological gradients is analysed by means of Canonical Correspondence Analysis (CCA). From the results of CCA it can be concluded that the occurrence of the Oreobolus cleefii type is restricted to areas with a thinner peat layer, a wider distance surface-anaerobic zone and water table-anaerobic zone, a higher NO₂ concentration and a lower pH. The occurrence of the Plantago rigida type is restricted to a situation with a lower electrical conductivity of the ground water, a lower NO₃ and PO₄ concentration, and a higher Fe concentration. The occurrence of the Sphagnum type is restricted to places with a higher conductivity of the ground water, a higher NO₃ and PO₄ concentration, and a lower Fe concentration. The occurrence of the Lophozia subinflata with Cortaderia sericantha type is restricted to a situation with a lower K and Al concentration.