Conflicting selection on the timing of germination in a natural population of Arabidopsis thaliana

The timing of germination is a key life‐history trait that may strongly influence plant fitness and that sets the stage for selection on traits expressed later in the life cycle. In seasonal environments, the period favourable for germination and the total length of the growing season are limited. The optimal timing of germination may therefore be governed by conflicting selection through survival and fecundity. We conducted a field experiment to examine the effects of timing of germination on survival, fecundity and overall fitness in a natural population of the annual herb Arabidopsis thaliana in north‐central Sweden. Seedlings were transplanted at three different times in late summer and in autumn covering the period of seed germination in the study population. Early germination was associated with low seedling survival, but also with high survival and fecundity among established plants. The advantages of germinating early more than balanced the disadvantage and selection favoured early germination. The results suggest that low survival among early germinating seeds is the main force opposing the evolution of earlier germination and that the optimal timing of germination should vary in space and time as a function of the direction and strength of selection acting during different life‐history stages.     

Effects of salinity and temperature on ex situ germination of the threatened Gulf of St. Lawrence Aster,Symphyotrichum laurentianum Fernald (Nesom)

The threatened Gulf of St. Lawrence Aster, Symphyotrichum laurentianum Fernald (Nesom), is an annual coastal halophyte of the southern Gulf of St. Lawrence, Canada. We examined the effects of salinity (0–20 g/L) and temperature (16–30°C) on germination of S. laurentianum seeds over 32 days. The time‐course of germination was significantly affected by both salinity and temperature. At lower temperatures (16°C and 23°C), germination was inhibited by salt water at days 16 and 32. However, at 30°C germination rates after 16 days were highest at an intermediate salinity, whereas after 32 days germination was uniformly high in all salinity treatments. Overall, the effect of temperature on germination was much stronger than the effect of salinity. Delays in germination resulting from exposure to salinity or from low soil temperatures could set up strong size asymmetries between seedlings of S. laurentianum and the surrounding vegetation, leading to suppression of growing seedlings via shading. Because germination has the potential to be a significant population bottleneck for this seed‐dependent annual, conservation efforts should consider microsite suitability for germination in the management of natural populations and in the selection of sites for explants.     

PLEIOTROPY IN THE WILD: THE DORMANCY GENE DOG1 EXERTS CASCADING CONTROL ON LIFE CYCLES

In the wild, organismal life cycles occur within seasonal cycles, so shifts in the timing of developmental transitions can alter the seasonal environment experienced subsequently. Effects of genes that control the timing of prior developmental events can therefore be magnified in the wild because they determine seasonal conditions experienced by subsequent life stages, which can influence subsequent phenotypic expression. We examined such environmentally induced pleiotropy of developmental‐timing genes in a field experiment with Arabidopsis thaliana. When studied in the field under natural seasonal variation, an A. thaliana seed‐dormancy gene, Delay Of Germination 1 (DOG1), was found to influence not only germination, but also flowering time, overall life history, and fitness. Flowering time of the previous generation, in turn, imposed maternal effects that altered germination, the effects of DOG1 alleles, and the direction of natural selection on these alleles. Thus under natural conditions, germination genes act as flowering genes and potentially vice versa. These results illustrate how seasonal environmental variation can alter pleiotropic effects of developmental‐timing genes, such that effects of genes that regulate prior life stages ramify to influence subsequent life stages. In this case, one gene acting at the seed stage impacted the entire life cycle.     

Among‐year variation in selection during early life stages and the genetic basis of fitness in Arabidopsis thaliana

Incomplete information regarding both selection regimes and the genetic basis of fitness limits our understanding of adaptive evolution. Among‐year variation in the genetic basis of fitness is rarely quantified, and estimates of selection are typically based on single components of fitness, thus potentially missing conflicting selection acting during other life‐history stages. Here, we examined among‐year variation in selection on a key life‐history trait and the genetic basis of fitness covering the whole life cycle in the annual plant Arabidopsis thaliana. We planted freshly matured seeds of >200 recombinant inbred lines (RILs) derived from a cross between two locally adapted populations (Italy and Sweden), and both parental genotypes at the native site of the Swedish population in three consecutive years. We quantified selection against the nonlocal Italian genotype, mapped quantitative trait loci (QTL) for fitness and its components, and quantified selection on timing of germination during different life stages. In all 3 years, the local Swedish genotype outperformed the nonlocal Italian genotype. However, both the contribution of early life stages to relative fitness, and the effects of fitness QTL varied among years. Timing of germination was under conflicting selection through seedling establishment vs. adult survival and fecundity, and both the direction and magnitude of net selection varied among years. Our results demonstrate that selection during early life stages and the genetic basis of fitness can vary markedly among years, emphasizing the need for multiyear studies considering the whole life cycle for a full understanding of natural selection and mechanisms maintaining local adaptation.     

Phenotypic selection on growth rhythm in whitebark pine under climatic conditions warmer than seed origins

Growth rhythm that is well synchronized with seasonal changes in local climatic conditions is understood to enhance fitness; however, rapid ongoing climate change threatens to disrupt this synchrony. To evaluate phenotypic selection on growth rhythm under expected warmer and drier future climate, seedlings from 49 populations of whitebark pine (Pinus albicaulis Engelm.) were grown and measured over more than 10 years in two common garden field experiments on sites that approximate the projected future climate of the seed origins. Selection on growth rhythm was assessed by relating individual plant fitness to timing and rate of shoot elongation. Differential survival clearly evidenced selection on growth rhythm. We detected directional and stabilizing selection that varied in magnitude between experimental sites and among years. The observed phenotypic selection supports the interpretation of clinal variation among populations within tree species as reflecting adaptive variation in response to past natural selection mediated by climate. To the extent that growth rhythm is heritable, results of the present study suggest evolution of whitebark pine toward a more distinct timing of shoot elongation and generally more rapid elongation in the immediate next generation under ongoing climate change in environments similar to the study sites.     

Response to joint selection on germination and flowering phenology depends on the direction of selection

Flowering and germination time are components of phenology, a complex phenotype that incorporates a number of traits. In natural populations, selection is likely to occur on multiple components of phenology at once. However, we have little knowledge of how joint selection on several phenological traits influences evolutionary response. We conducted one generation of artificial selection for all combinations of early and late germination and flowering on replicated lines within two independent base populations in the herb Campanula americana. We then measured response to selection and realized heritability for each trait. Response to selection and heritability were greater for flowering time than germination time, indicating greater evolutionary potential of this trait. Selection for earlier phenology, both flowering and germination, did not depend on the direction of selection on the other trait, whereas response to selection to delay germination and flowering was greater when selection on the other trait was in the opposite direction (e.g., early germination and late flowering), indicating a negative genetic correlation between the traits. Therefore, the extent to which correlations shaped response to selection depended on the direction of selection. Furthermore, the genetic correlation between timing of germination and flowering varies across the trait distributions. The negative correlation between germination and flowering time found when selecting for delayed phenology follows theoretical predictions of constraint for traits that jointly determine life history schedule. In contrast, the lack of constraint found when selecting for an accelerated phenology suggests a reduction of the covariance due to strong selection favoring earlier flowering and a shorter life cycle. This genetic architecture, in turn, will facilitate further evolution of the early phenology often favored in warm climates.     

Niche construction through germination cueing: life-history responses to timing of germination in Arabidopsis thaliana

Germination responses to seasonal conditions determine the environment experienced by postgermination life stages, and this ability has potential consequences for the evolution of plant life histories. Using recombinant inbred lines of Arabidopsis thaliana, we tested whether life-history characters exhibited plasticity to germination timing, whether germination timing influenced the strength and mode of natural selection on life-history traits, and whether germination timing influenced the expression of genetic variation for life-history traits. Adult life-history traits exhibited strong plasticity to season of germination, and season of germination significantly altered the strength, mode, and even direction of selection on life-history traits under some conditions. None of the average plastic responses to season of germination or season of dispersal were adaptive, although some genotypes within our sample did exhibit adaptive responses. Thus, recombination between inbred lineages created some novel adaptive genotypes with improved responses to the seasonal timing of germination under some, but not all, conditions. Genetically based variation in germination time tended to augment genetic variances of adult life-history traits, but it did not increase the heritabilities because it also increased environmentally induced variance. Under some conditions, plasticity of life-history traits in response to genetically variable germination timing actually obscured genetic variation for those traits. Therefore, the evolution of germination responses can influence the evolution of life histories in a general manner by altering natural selection on life-history traits and the genetic variation of these traits.     

The role of invertebrates in seedling establishment in a heterocarpic plant,Atriplex sagittata

Seed heteromorphism is a marked character of many Chenopodioideae (Amaranthaceae). Seed morphs differ in dormancy, germination and seedling biology, but differences in their predation have not yet been studied. Atriplex sagittata produces small black dormant and large brown non‐dormant seeds. In this study, the timing of seed release and seedling establishment were ascertained, and their consumption by invertebrates (carabids, isopods and slugs) was studied. Seeds dispersed in the autumn passed the winter on the ground surface, protected from invertebrate predation by low temperatures. In the following vegetative season, ungerminated black seeds exposed to predation on ground surface were preferred by a large carabid species, Pseudoophonus rufipes. Some black and all brown seeds escaped predation by germinating in early spring. The seedlings were little endangered by carabids and isopods but were preferred by an invasive slug, Arion vulgaris, the feeding of which can exterminate seedlings at places in which slugs are abundant. Invertebrate predation is important factor of seed and seedling mortality of A. sagittata and seed heteromorphism modifies its intensity and timing.     

Mechanisms of structural change derived from patterns of seedling emergence and mortality in a semi-natural meadow

Questions: Is seedling emergence limited by the set of viable seeds, by incompatibility between the phenology of seed shedding and timing of mowing, or by dry weather in germination periods? Does seedling mortality fluctuate with season and weather? Location: Negrentino, southern Alps, Switzerland. Methods: Fecundity estimates of the dominant grass Bromus erectus; highly frequent counts of spontaneous seedlings by species and calculation of a community-level average mortality rate across 5 years; species-level records of seed shedding date and measurements of seed mass; measurement of soil moisture. Results: B. erectus produced 143.9 viable seeds/m²/year while the density of its seedlings was a 55 times smaller fraction. Grasses had fewer seedlings than forbs and their phenology of seed shedding was less compatible with mowing date. Soil moisture was a strong determinant of seedling emergence in spring and less so in autumn. Average seedling mortality declined with age of the populations and reached a maximum in an extremely dry summer. In relatively wet summers establishment success was positively related to seed mass. Conclusion: Community structure is susceptible to drought through mechanisms that selectively reduce recruits of coexisting plant functional groups. We propose that (1) more frequent intense droughts tend to reduce species that depend on frequent recruitment from seed, hence favour long-lived clonally spreading species, (2) drought timing selects between species with different germination phenology and drought resistance, and (3) drought impacts can be mitigated by changing management regimes that affect seed shedding.     

The evolutionary ecology of seed germination of Arabidopsis thaliana: variable natural selection on germination timing

Germination timing of Arabidopsis thaliana displays strong plasticity to geographic location and seasonal conditions experienced by seeds. We identified which plastic responses were adaptive using recombinant inbred lines in a field manipulation of geographic location (Kentucky, KY; Rhode Island, RI), maternal photoperiod (14-h and 10-h days), and season of dispersal (June and November). Transgressive segregation created novel genotypes that had either higher fitness or lower fitness in certain environments than either parent. Natural selection on germination timing and its variation explained 72% of the variance in fitness among genotypes in KY, 30% in June-dispersed seeds in RI, but only 4% in November-dispersed seeds in RI. Therefore, natural selection on germination timing is an extremely efficient sieve that can determine which genotypes can persist in some locations, and its efficiency is geographically variable and depends on other aspects of life history. We found no evidence for adaptive responses to maternal photoperiod during seed maturation. We did find adaptive plasticity to season of seed dispersal in RI. Seeds dispersed in June postponed germination, which was adaptive, while seeds dispersed in November accelerated germination, which was also adaptive. We also found maladaptive plasticity to geographic location for seeds dispersed in June, such that seeds dispersed in KY germinated much sooner than the optimum time. Consequently, bet hedging in germination timing was favorable in KY; genotypes with more variation in germination timing had higher fitness because greater variation was associated with postponed germination. Selection on germination timing varied across geographic location, indicating that germination timing can be a critical stage in the establishment of genotypes in new locations. The rate of evolution of germination timing may therefore strongly influence the rate at which species can expand their range.     

Selection and plasticity both account for interannual variation in life‐history phenology in an annual prairie legume

As the environment changes, so too must plant communities and populations if they are to persist. Life‐history transitions and their timing are often the traits that are most responsive to changing environmental conditions. To compare the contributions of plasticity and natural selective response to variation in germination and flowering phenology, we performed a quantitative genetic study of phenotypic selection on Chamaecrista fasciculata (Fabaceae) across two consecutive years in a restored tallgrass prairie. The earliest dates of germination and flowering were recorded for two parental cohorts and one progeny cohort in an experimental garden. Environmental differences between years were the largest contributors to phenological variation in this population. In addition, there was substantial heritability for flowering time and statistically significant selection for advancement of flowering. Comparison between a progeny cohort and its preselection parental cohort indicated a change in mean flowering time consistent with the direction of selection. Selection on germination time was weaker than that on flowering time, while environmental effects on germination time were stronger. The response to selection on flowering time was detectable when accounting for the effect of the environment on phenotypic differences, highlighting the importance of controlling for year‐to‐year environmental variation in quantitative genetic studies.     

Factors affecting the population dynamics of Suaeda maritima at initial stages of development

This study describes life history and population dynamics of the annual halophyte Suaeda maritima, at initial stages of seedling development, in salt-marshes of the Mont-Saint-Michel Bay. Effects of salinity on seed germination and seedling development were studied both in the laboratory and in the field. Salinity was measured as sediment electrical conductivity. Experiments in the laboratory showed that Suaeda maritima was relatively tolerant to salinity during the germination stage. In the field, germination occurred when soil salinity was minimal. Almost all seeds germinated in the field; this may explain the absence of a persistent seed bank. Salinity did not seem to affect the growth of seedlings either. Mortality in the field was attributed to physical factors such as anoxia during temporary immersion, burial by sediment and tidal uprooting. The intensity of these effects varied according to the location of Suaeda maritima seedlings: in hollows, along the edge of tidal creeks, in gaps among dense vegetation cover, or in pattern with Puccinellia maritima. Perennial vegetation did not restrict Suaeda maritima germination. In contrast, perennials such as Puccinellia maritima and Halimione portulacoides limited the development of Suaeda maritima seedlings since only a small number of this annual emerged beneath their canopies. The fate of seedlings depended to a great extent on the permeability of the perennial canopy to light. Thus, disturbance resulting in bare patches inside the perennial vegetation seemed essential for the development of this annual species. Suaeda maritima can grow in the presence of Puccinellia maritima so long as the latter present as an open matrix. Suaeda maritima may also benefit from protection against desiccation and tidal action where this occurs.     

环境因素对伞形科两种植物种子萌发的影响

种子萌发模式是植物生活史策略中的一个主要特征。研究了环境因素对伞形科濒危植物明党参 (Changium smyrnioidesWolff)和非濒危植物峨参 (Anthriscussylvestris Hoffm.)种子萌发特性的影响。结果表明 ,温度是影响明党参和峨参这类冬性植物种子萌发的主要因素。两物种的种子萌发温度范围是 5～ 15℃ ,明党参种子的最适萌发温度是 10℃ ,峨参是 5℃ ,两物种在15℃时萌发率均已受抑制 ,到 18℃时几乎不萌发。两种植物种子的萌发率与温度显著负相关。两种植物种子在光照和黑暗条件下萌发率差异很小 ,均是中性种子。明党参种子在干燥条件下比峨参种子更容易失去活力 ,其种子的适宜含水量 (5 .9%～6 .4 % )比峨参 (<3.7% )高。种子质量好、萌发率高但种子产量低也是濒危植物种群更新的一个薄弱环节。     

Seed rain and soil seed bank of Picea asperata Mast. in subalpine coniferous forest of western Sichuan,China

Abstract

Dragon spruce (Picea asperata Mast.) is widely planted on clear-cuts from natural subalpine coniferous forests in western Sichuan. To assess the natural regeneration potential of this species in spruce plantations of different ages, field studies on the seed rain, seed bank, and seedling recruitment were conducted in 20-year, 30-year, and 60-year plantations, and in a retained natural forest ca. 150 years old for comparison. Moreover, a series of temperature and light regimes were also designed in March 2003 to test germination/dormancy responses of the P. asperata seeds to different conditions. In the plantations considered, both the densities of seed rain and soil seed bank increased with increasing stand age, whereas they were both low beneath the natural forest partially due to low adult density of P. asperata adult trees. P. asperata has a transient seed bank, and ca. 60% of seeds were found in the litter layer. Seed decay and seed predation were the two most important factors affecting soil seed bank dynamics, which caused a number of seed losses from the soil. Only a small fraction germinated and produced seedlings, and the indices of the losses from the seed bank via germination in the 30-year plantation, 60-year plantation and natural forest were 4.75, 5.10, and 2.80%, respectively. High seedling mortality was observed after seedling emergence, and most of the germinated seedlings died out within one growing season. The P. asperata seeds showed a high percent germination and no significant differences under most light and temperature regimes except for full sunlight or temperature below 5°C. In conclusion, despite a substantial number of seed produced, the high depletion of soil seed, the low seedling output, and high seedling mortality may obscure the natural regeneration potential of this tree species.     

Do seeds sense each other? Testing for density‐dependent germination in desert perennial plants

The timing of seedling emergence may strongly affect fitness in competitive environments. Therefore, selection should favour mechanisms that allow sensing neighbours prior to emergence. We tested whether or not germination is affected by density and identity of neighbouring seeds or seedlings of desert perennial plants. Based on theory, we predicted that germination fractions are independent of neighbouring seeds, that germination is accelerated in dense interspecific neighbourhoods, and neighbour effects are caused by seedlings, not by seeds. We examined germination fraction and timing of four naturally coexisting sandy desert perennial species in low versus high seed densities in both intra- and interspecific neighbourhoods, and with and without removal of newly emerged seedlings. Neighbours accelerated germination independent of density and this pattern was apparently caused by the presence of early emerging seedlings. Germination fractions were lower in high seed densities even when neighbours did not germinate, indicating that seeds were able to sense each other prior to emergence. Early germination may be adaptive because fast emerging seedlings may gain a competitive edge over slow emerging ones. However, since seeds that did not germinate died, delayed germination may only be advantageous for mother plants when sib competition is intense. Another key finding was a competitive hierarchy with late successional species germinating faster and inhibiting germination of pioneer species. This indicates that successional processes may be directed as early as during germination.     

Long-term variability in seed size and seedling establishment of <Emphasis Type="Italic">Maianthemum bifolium</Emphasis>

Relatively few studies conducted in natural plants populations focus on the relationship between seed size and their germination ability and seedling establishment. Maianthemum bifolium is a perennial herb that spreads vegetatively through rhizomatous growth and reproduces through seeds. However, this species is characterized as seed and microsite limited, and under undisturbed conditions seedlings are not noted. The studies were conducted in two populations of M. bifolium in six subsequent seasons. The mean seed mass was negatively correlated both per ramet as well as in the fruit with the number of seeds, and positively with its height and the number of flowers. The long-term mean annual production of seeds in the populations was 37 and 56 seeds per m². The seeds from both populations had similarly high germination abilities that were approximately 90% under laboratory conditions, 60% in garden, and 55% in the natural habitat. Seeds from four size classes were sown and a positive correlation was noted between seedling establishment and the mass of the seeds from which they grew (r_S = 0.64). Seedling survival was also significantly correlated with seed mass.     

DOG1 expression is predicted by the seed-maturation environment and contributes to geographical variation in germination in Arabidopsis thaliana

Seasonal germination timing of Arabidopsis thaliana strongly influences overall life history expression and is the target of intense natural selection. This seasonal germination timing depends strongly on the interaction between genetics and seasonal environments both before and after seed dispersal. DELAY OF GERMINATION 1 (DOG1) is the first gene that has been identified to be associated with natural variation in primary dormancy in A. thaliana. Here, we report interaccession variation in DOG1 expression and document that DOG1 expression is associated with seed‐maturation temperature effects on germination; DOG1 expression increased when seeds were matured at low temperature, and this increased expression was associated with increased dormancy of those seeds. Variation in DOG1 expression suggests a geographical structure such that southern accessions, which are more dormant, tend to initiate DOG1 expression earlier during seed maturation and achieved higher expression levels at the end of silique development than did northern accessions. Although elimination of the synthesis of phytohormone abscisic acid (ABA) results in the elimination of maternal temperature effects on dormancy, DOG1 expression predicted dormancy better than expression of genes involved in ABA metabolism.     

Demographic consequences of delayed germination in two annual grasses from two locations of contrasting aridity

Delayed seed germination is considered to be a bet-hedging strategy, but experimental evidence of its adaptive role as an inherited trait is still lacking. In each of two co-occuring annual grass species, populations of Mediterranean and desert origin were studied during three consecutive years for population demography and seed germination in the reciprocally introduced experimental soil seed banks. The two environments strikingly differed in productivity (annual rainfall) and predictability (variation in amount and timing of annual rainfall). The two species exhibited highly similar pattern of seed size and dormancy across the two environments. In both species, a higher proportion of dormant seeds was observed at the desert location and for the seeds of desert origin, consistent with bet-hedging buffering against unpredictability of rainfall and high probability of drought in this environment. In addition, in both species seed mass was significantly less in plants of desert origin than in plants of Mediterranean origin. The two environments differed in demographic consequences of temporal variation in precipitation. In the Mediterranean population, even in the year of least precipitation, adults grew to maturity and seeds were produced. These seeds served to maintain population size. In contrast, in the desert population, in the year of least rainfall no seedlings survived to maturity and the soil seed bank was the only source of population persistence. Altogether, the results concur with predicted by adaptive bet hedging importance of delayed germination under marginal precipitation.     

Seedling performance in a trioecious cactus,Pachycereus pringlei: Effects of maternity and paternity

We studied seed germination and the growth and survivorship of seedlings of females and hermaphrodites ofPachycereus pringlei (cardon), a Mexican columnar cactus whose geographically variable breeding system includes trioecy and gynodioecy. Results of a two-year field experiment conducted near Bahia Kino, Sonora, Mexico and a ten-month laboratory experiment were similar and did not support the hypothesis that seedlings of females outperform those of hermaphrodites. In the field, percent seed germination and 2-yr seedling survivorship averaged 66% and 95%, respectively and did not differ among six treatment classes. Seedlings of hermaphrodites generally were larger than those of females at the end of both experiments. Selfed seedlings of hermaphrodites did not grow more slowly than outcrossed seedlings of hermaphrodites or females. Hermaphrodite seedlings performed best when pollinated with hermaphrodite pollen; female seedlings performed best with male pollen. We conclude that superior seedling performance cannot explain why females are able to coexist with hermaphrodites in populations of this cactus. Instead, we postulate that greater annual seed production, which averaged 1.6 times higher in females than in hermaphrodites in two years, may be sufficient to allow females to co-occur with hermaphrodites in this large, longlived plant, especially if sex determination involves cytoplasmic-nuclear inheritance.     

带叶兜兰种子原地共生萌发及有效菌根真菌的分离与鉴定

为获得带叶兜兰(Paphiopedilum hirsutissimum)种子萌发的共生真菌,采用原地共生萌发技术获得了2株自然萌发的小幼苗,并分离和筛选出了有效的种子萌发共生菌——瘤菌根菌(Epulorhiza sp.)。为验证分离菌株对带叶兜兰种子萌发的有效性,将Phs34号菌株与带叶兜兰种子在灭菌后的原生境基质上进行室内共生萌发试验,结果表明,经过6周的培养,对照组没有观察到种子的萌发;接菌的种子胚明显膨大,突破种皮,形成原球茎,平均萌发率为(58.35±3.41)%。这表明分离得到的瘤菌根菌能促进带叶兜兰的种子萌发。