Floristic characterisation of alkali soils in northwestern India

Summary Floristic composition studied in a 40 hectares representative site of alkali soils in the Indo-gangetic plains of Northwestern India revealed a remarkably restricted spectrum of natural vegetation. Soil analysis of specific niches, occupied by aggregations of different species, was employed to identify alkali halophytes. Response functions of eight prominent species to increasing levels of soil alkalinity, studied in pot culture, showed that most of them were adapted to alkali soils. Based on the computed importance value indices and observed biomass production maxima, it has been inferred thatSporobolus marginatus, Sporobulus coromandelianus, Diplachne fusca andChloris barbata, qualify as plant indicators of high-alkali soil conditions.     

Further notes on the cyperaceae of ceylon

Six species of Cyperaceae from Cyelon are taxonomically discussed. Described as new isCarex taprobanensis, an ally ofC. stramentitia. New combinations made areBulbostylis barbata ssp.pulchella, Cyperus, conglomeratus ssp.pachyrrhizus, andMachaerina rubiginosa ssp.crassa.     

Occurrence of the host-parasite system Rhaphiodon vulpinus and Ceratomyxa barbata n. sp. in the two largest watersheds in South America

While around world, species of the genus Ceratomyxa parasite majority marine hosts, growing diversity has been reported in South American freshwater fish. The present study reports Ceratomyxa barbata n. sp. parasitizing the gallbladder of the Rhaphiodon vulpinus fish from the Amazon and La Plata basins. Morphological (light and transmission electron microscopy), molecular (sequencing of small subunit ribosomal DNA - SSU rDNA), and phylogenetic analyses were used to characterize the new species. Worm-like plasmodia endowed with motility were found swimming freely in the bile. The myxospores were elongated, lightly arcuate, with rounded ends and had polar tubules with 3 coils in the polar capsules. Ultrastructural analysis revealed plasmodia composed of an outer cytoplasmic region, where elongated tubular mitochondria, a rough endoplasmic reticulum, sporogonic stages, and a large vacuole occupying the internal area were observed. Phylogenetic analysis, based on SSU rDNA, found that among all South America freshwater Ceratomyxa species, C. barbata n. sp. arises as an earlier divergent species. The present study reveals the occurrence of this host-parasite system (R. vulpinus/C. barbata n. sp.) in the two largest watersheds on the continent.     

Host Status of Seven Weed Species and Their Effects on Ditylenchus destructor Infestation of Peanut

The host suitability to Ditylenchus destructor of seven common weed species in peanut (Arachis hypogaea) fields in South Africa was determined. Based on the number of nematodes per root unit, white goosefoot (Chenopodium album), feathertop chloris (Chloris virgata), purple nutsedge (Cyperus rotundus), jimson weed (Datura stramonium), goose grass (Eleusine indica), khaki weed (Tagetes minuta), and cocklebur (Xanthium strumarium) were poor hosts. Ditylenchus destructor survived on all weed species; population densities increased in peanut hulls and caused severe damage to seeds of peanut grown after weeds. Roots of purple nutsedge left in the soil suppressed populations of D. destructor and root and pod development in peanut grown after the weed. However, nematode populations in peanut hulls and seeds were not suppressed. Some weed species, especially purple nutsedge which is common in peanut fields, can be used to indicate the presence of D. destructor in the absence of peanut.     

Differential cold tolerance, starch, sugar, protein, and lipid of yellow and purple nutsedge tubers

From measurements of viability after exposure of tubers to natural overwintering in the soil and 6 weeks exposure at 2 C, species cold tolerance of the tubers was ranked in decreasing order: yellow nutsedge `I' (Cyperus esculentus L.), an ecotype originating in Illinois; yellow nutsedge `G', an ecotype originating in Georgia; and purple nutsedge (Cyperus rotundus L.). The ratios of unsaturated-saturated fatty acids in tuber triglycerides, tuber polar lipids, and leaf polar lipids followed the same order as the cold tolerance rankings, with the most cold-hardy species having the highest ratios. Lipid content was less than 1% of dry weight in purple nutsedge tubers, but was from 5 to 7% in both yellow nutsedge tubers. Starch, sugar, and lipid contents increased significantly in the hardy yellow nutsedge `I' tubers during a 6-week exposure to 2 C, but did not change in the susceptible purple nutsedge tubers; only sugar increased in yellow nutsedge `G' tubers after this treatment. Protein content was not altered by the 2 C treatment in any of the tubers. Apparently, several factors involving starch, sugar, lipids, and fatty acids are related to the differences in tolerance to cold in these species.     

Growth and water requirements of some range plants under controlled conditions

Summary The growth and water requirements of ten of the native and introduced range species were compared at different levels of moisture stress between the permanent wilting percentage and the moisture equivalent.The most vigorous vegetative growth and highest dry matter production were shown byChloris gayana.The transpiration intensity of all the studied species was low and comparable with that of xerophytes living under extremely dry conditions. At the highest moisture stress which is a xeric condition, the transpiration intensity varied between 90 mg/g.h inOnonis vaginalis and 160 mg/g.h inPanicum antidotale.The osmotic pressure varied widely between 16.5 atm inPennisetum dichotomum and 30.0 atm inOryzopsis miliacea at the highest moisture stress.The present investigation revealed that all the studied species are drought resistant as shown by their transpiration intensity and osmotic pressure which are comparable with those of xerophytes. SinceChloris gayana exhibits the highest dry matter production in addition to its drought resistance therefore it can be considered as the most suitable species for cultivation in desert regions.     

Peculiarities of early ontogenesis of the tubenose poacher, <Emphasis Type="Italic">Pallasina barbata</Emphasis> steindachner, 1876 (Pisces,Agonidae) from Peter the Great Bay (Sea of Japan)

Based on the analysis of original material (52 specimens of Pallasina barbata larvae and juveniles), sampled in the Peter the Great Bay (Sea of Japan) from 1992 to 2006, the ontogenetic stages of this species were described for the first time. It is shown that P. barbata has a planktonic larval stage in its development. The major morphologic features that are typical for larvae and juveniles during their development were revealed. It was shown that snout length, head length and pectoral fin size are increased with growth; at the same time body height and eye diameter are decreased, and the nature of larval pigmentation is changed. The main differences between P. barbata and close species are shown. Original illustrations of larvae and juvenile are provided.     

Effects of triazoles on fungi: V. Response by a naturally tolerant species,Mucor rouxii

The responses ofMucor rouxii to propiconazole, and in some cases etaconazole, with respect to lipid metabolism were compared with those ofAspergillus ochraceus andRhizopus stolonifer which exhibit higehr sensitivity to this triazole by factors of 50 and 10, respectively. Propiconazole inhibited the C-14 demethylation of lanosterol in each of the species tested, which resulted in a dose-related decrease in ergosterol and increase in C-14 methyl sterols. The principal C-14 methyl sterol that accumulated with inhibitor treatment was 24-methylene dihydrolanosterol. The tolerance ofM. rouxii could not be explained by reduced inhibitor uptake, alteration of the inhibitor binding site, or detoxification through metabolism since C-14 methyl sterols accumulated in mycelium treated with 2.0 μg/ml propiconazole, a concentration 40 times less than that required for 50% growth inhibition and at which no growth inhibition was detected in this species, and one that gave over 50% inhibition ofA. ochraceus. Other alterations in lipid metabolism that accompany treatment with sterol inhibitors in relatively sensitive species, i.e., accumulation of free fatty acids and increase in linoleic acid (C_18:2), were not observed inM. rouxii orR. stolonifer, but they were found inA. ochraceus. The results of this study suggest that the quantitative and perhaps the qualitative nature of the requirement for sterols may be different inM. rouxii, and perhaps other tolerant Mucorales, than in the more sensitive fungi.     

Comparative Genome Analysis of Scutellaria baicalensis and Scutellaria barbata Reveals the Evolution of Active Flavonoid Biosynthesis

Scutellaria baicalensis (S. baicalensis) and Scutellaria barbata (S. barbata) are common medicinal plants of the Lamiaceae family. Both produce specific flavonoid compounds, including baicalein, scutellarein, norwogonin, and wogonin, as well as their glycosides, which exhibit antioxidant and antitumor activities. Here, we report chromosome-level genome assemblies of S. baicalensis and S. barbata with quantitative chromosomal variation (2n = 18 and 2n = 26, respectively). The divergence of S. baicalensis and S. barbata occurred far earlier than previously reported, and a whole-genome duplication (WGD) event was identified. The insertion of long terminal repeat elements after speciation might be responsible for the observed chromosomal expansion and rearrangement. Comparative genome analysis of the congeneric species revealed the species-specific evolution of chrysin and apigenin biosynthetic genes, such as the S. baicalensis-specific tandem duplication of genes encoding phenylalanine ammonia lyase and chalcone synthase, and the S. barbata-specific duplication of genes encoding 4-CoA ligase. In addition, the paralogous duplication, colinearity, and expression diversity of CYP82D subfamily members revealed the functional divergence of genes encoding flavone hydroxylase between S. baicalensis and S. barbata. Analyzing these Scutellaria genomes reveals the common and species-specific evolution of flavone biosynthetic genes. Thus, these findings would facilitate the development of molecular breeding and studies of biosynthesis and regulation of bioactive compounds.     

A vegetation-based hierarchical classification for seasonally pulsed floodplains in the Okavango Delta,Botswana

A classification scheme is presented for seasonal floodplains of the Boro-Xudum distributary of the Okavango Delta, Botswana. This distributary is subject to an annual flood-pulse, the inundated area varying from a mean low of 3 600 km² to a mean high of 5 400 km² between 2000 and 2006. A stratified random sample of 30 sites was surveyed for species composition and abundance in March–June 2007, using multiple quadrats along transects orthogonal to the floodplain long axis. A combination of indicator species analysis and ordination was used to derive a hierarchical classification system for floodplains, based on species assemblages. Indicator species analysis was used to identify ecologically meaningful levels of division, at four and nine classes. The four main classes of floodplain were: (1) Dry Floodplain Grassland (main indicators Urochloa mosambicensis, Ipomoea coptica, Chloris virgata and Pechuel-Loeschea leubnitziae); (2) Seasonally Flooded Grassland (Nicolasia costata, Eragrostis lappula, Cyperus sphaerospermus and Setaria sphacelata); (3) Seasonally Flooded Sedgeland (Eleocharis dulcis, Leersia hexandra, Oryza longistaminata and Cyperus articulatus); and (4) Seasonal Aquatic Communities (Sacciolepis typhura, Eleocharis variegata, Fuirena pubescens and Cycnium tubulosum). The resultant dendrogram provides an objective routine for classifying floodplains in the Boro-Xudum distributary in an ecologically meaningful way. This classification will assist in monitoring changes in vegetation resulting from hydrological change.     

Flaveria pringlei (C3) andFlaveria trinervia (C4) under NaCl stress

The C₄ speciesFlaveria trinervia is obviously better adapted to saline environments than the C₃ speciesF. pringlei. Treatment with 100 mM NaCl diminished crop growth rate inF. pringlei by 38% but not inF. trinervia. Under saline conditions, more assimilates were invested in leaf growth inF. trinervia but not inF. pringlei. Electrolyte concentration inF. trinervia in control and salt treated plants is lower than inF. pringlei. Fluorescence data do not indicate a damage of PS 2 charge separation in both species. Whether the C₄ photosynthetic pathway inF. trinervia is responsible for the improved salt tolerance compared toF. pringlei remains an open question.     

Management of Local Stressors Can Improve the Resilience of Marine Canopy Algae to Global Stressors

Coastal systems are increasingly threatened by multiple local anthropogenic and global climatic stressors. With the difficulties in remediating global stressors, management requires alternative approaches that focus on local scales. We used manipulative experiments to test whether reducing local stressors (sediment load and nutrient concentrations) can improve the resilience of foundation species (canopy algae along temperate rocky coastlines) to future projected global climate stressors (high wave exposure, increasing sea surface temperature), which are less amenable to management actions. We focused on Fucoids (Cystoseira barbata) along the north-western Adriatic coast in the Mediterranean Sea because of their ecological relevance, sensitivity to a variety of human impacts, and declared conservation priority. At current levels of sediment and nutrients, C. barbata showed negative responses to the simulated future scenarios of high wave exposure and increased sea surface temperature. However, reducing the sediment load increased the survival of C. barbata recruits by 90.24% at high wave exposure while reducing nutrient concentrations resulted in a 20.14% increase in the survival and enhanced the growth of recruited juveniles at high temperature. We conclude that improving water quality by reducing nutrient concentrations, and particularly the sediment load, would significantly increase the resilience of C. barbata populations to projected increases in climate stressors. Developing and applying appropriate targets for specific local anthropogenic stressors could be an effective management action to halt the severe and ongoing loss of key marine habitats.     

Lead,zinc and iron (Fe2+) tolerances in wetland plants and relation to root anatomy and spatial pattern of ROL

Metal (Pb, Zn and Fe²⁺) tolerances, root anatomy and profile of radial oxygen loss (ROL) along the root (i.e., spatial pattern of ROL) were studied in 10 emergent wetland plants. The species studied could be classified into three groups. Group I included Alternanthera philoxeroides, Beckmannia syzigachne, Oenanthe javanica and Polypogon fugax, with high ROL along the whole length of root (‘partial barrier’ to ROL). Group II included Cyperus flabelliformis, Cyperus malaccensis, Juncus effusus, Leersia hexandra and Panicum paludosum, ROL of which was remarkably high just behind the root apex, but decreased significantly at relatively basal regions (‘tight barrier’ to ROL). Group III consisted of only Neyraudia reynaudiana, with extremely low ROL along the length of root. The results indicated that metal tolerance in wetland plants was related to root anatomy and spatial pattern of ROL. Co-evolution of metal (Fe and Zn) tolerance and flood tolerance possibly developed in wetland plants since species showing a ‘tight barrier’ to ROL (a common trait of flood-tolerant species) in basal root zones had higher Fe and Zn tolerances than those showing a ‘partial barrier’. Root anatomy such as lignin and suberin deposition contributed to a ‘tight barrier’ in root and conferred to exclusion ability in tolerant species.     

Speciation and paraphyly in western mediterranean hares (Lepus castroviejoi,L. europaeus,L. granatensis,andL. capensis) revealed by mitochondrial DNA phylogeny

Mitochondrial DNA (mtDNA) variation among specimens of the northwestern African hare (Lepus capensis schlumbergeri) and three European hares sampled in Spain (L. castroviejoi andL. granatensis, which are endemic to the Iberian Peninsula, andL. europaeus) was analyzed using seven restriction endonucleases. Fourteen haplotypes were found among the 34 animals examined. Restriction site maps were constructed and the phylogeny of the haplotypes was inferred. mtDNA ofL. capensis was the most divergent, which is consistent with its allopatric African distribution and with an African origin of European hares. We estimated that mtDNA in hares diverges at a rate of 1.5–1.8% per MY assuming that the European and African populations separated 5–6 MYBP. Maximum intraspecies nucleotide divergences were 1.3% inL. capensis, 2.7% inL. castroviejoi, and 2.3% inL. granatensis but 13.0% inL. europaeus. The latter species contained two main mtDNA lineages, one on the branch leading toL. castroviejoi and the other on that leading toL. granatensis. The separation of these two lineages from theL. castroviejoi orL. granatensis lineages appears to be much older than the first paleontological record ofL. europaeus in the Iberian peninsula. This suggests that the apparent polyphyly ofL. europaeus is due not to secondary introgression, but to the retention of ancestral polymorphism inL. europaeus. The results suggest thatL. europaeus either has evolved as a very large population for a long time or has been fractionated. Such a pattern of persistence of very divergent lineages has also been reported in other species of highly mobile terrestrial mammals. As far as mtDNA is concerned,L. europaeus appears to be the common phylogenetic trunk which has diversified during dispersion over the European continent and from whichL. castroviejoi andL. granatensis speciated separately in southwest Europe.     

Quaternary plant fossils from the Jebel Marra volcanic complex and their palaeoclimatic interpretation

The fossil plants from the Malha Crater, previously referred to as Cyperus papyrus L. have been re-identified as Phragmites sp.; since determination to species is not possible, this record can have no phytogeographical or palaeoclimatic significance.Olea sp., probably O. laperrinei Batt. et Trab. from Jebel Marra, dated 3 500 B.P. raises interesting but so far speculative considerations regarding the inter-relationship of Mediterranean and tropical African species in the southern Sahara during the last pluvial period.Leaf impressions of the oil palm, Elaeis guineensis Jacq. from Jebel Marra, where it is no longer to be found, plus considerations regarding other surviving forest species in the gallery forests, suggest a minimum northwards climatic shift during the last pluvial in the order of 400 km.This fossil record is regarded as suggesting that the source of the oil palm kernel discovered at the Neolithic site of Esh Shaheinab, near Khartoum, is probably Jebel Marra.     

Variation in the ability of Didemnum sp. to invade established communities

Over the past 30 years southern New England, USA has been invaded by several species of ascidians, including Botrylloides violaceus, Diplosoma listerianum, Styela clava, and Ascidiella aspersa. These species have become dominate in coastal embayments and marinas but are usually absent from more open water coastal areas. A colonial ascidian, Didemnum sp. has invaded southern New England during the past 10 years and we first observed this species in eastern Long Island Sound in 2000. It has become the dominant at several field sites while remaining in low abundance at others. We conducted an experiment at two places, a protected marina and an open coast site, to examine its ability to compete with the established fouling community. Small colonies of Didemnum were transplanted onto panels with communities that varied in age from one to four weeks old and these treatments along with controls with only Didemnum were exposed at both sites. In most treatments Didemnum became a dominant species in the communities at both sites but it reached higher abundances at the open coast site. Potential causes of the observed differences are predation on other species of ascidians at the open coast site reducing recruitment of these species and competition, lower tolerance for elevated temperatures at the marina site, or other environmental parameters that might affect growth rates.     

Green synthesis of silver nanoparticles from aqueous extract of Scutellaria barbata and coating on the cotton fabric for antimicrobial applications and wound healing activity in fibroblast cells (L929)

Scutellaria barbata is a perennial herb which was vastly prescribed in Chinese medicine to treat inflammations, infections and it is also used a detoxifying agent. We synthesized silver nanoparticles with Scutellaria barbata extract and characterized the nanoparticles with UV–Vis spectroscopic analysis, TEM, AFM, FTIR and XRD. The biofilm inhibiting property of synthesized silver nanoparticles were examined with XTT reduction assay and the antimicrobial property was examined with well diffusion method. The silver nanoparticles were also coated with cotton fabrics and their efficacy against antimicrobials was analyzed to prove its application. The cytotoxic property of synthesized silver nanoparticles was examined with L929 fibroblast cells using MTT assay. Finally we analyzed the wound healing property of synthesized silver nanoparticles with wound scratch assay. The result of our UV–Vis spectroscopic analysis confirms Scutellaria barbata aqueous extract reduced silver ions and synthesized silver nanoparticles. The characterization studies TEM, AFM, FTIR and XRD confirms the synthesized silver nanoparticles are in ideal shape and size to be utilized as a drug. The XTT reduction assay proves silver nanoparticles effectively inhibits the biofilm formation in both resistant and sensitive strains. Antimicrobial sensitivity tests confirms synthesized silver nanoparticles and cotton coated synthesized silver nanoparticles both are effective against gram positive, gram negative and fungal species. Further the results of MTT assay confirms the synthesized silver nanoparticles are non toxic and finally the wound healing potency of the nanoparticles was confirmed with wound scratch assay. Over all our results authentically confirms the silver nanoparticles synthesized with Scutellaria barbata aqueous extract is potent wound healing drug.     

Differential antioxidant enzyme and thiol responses of tolerant and non-tolerant clones of <Emphasis Type="Italic">Chloris barbata</Emphasis> to cadmium-stress

Tolerant and non-tolerant clones of Chloris barbata Sw. obtained, respectively, from an erstwhile mercury contaminated solid waste dump site near a chloralkali plant and a non-contaminated (control) site were subjected to cadmium-stress by growing the rooted cuttings in water containing CdSO₄, 13 and 130 μM. Differences between the two clones in their response to cadmium-stress were noted in root growth, and also with respect to certain biochemical parameters. Whereas catalase activity decreased and non protein-thiol levels increased in the non-tolerant clone, the level of protein-thiol alone increased significantly in the tolerant clone in response to cadmium-stress. No remarkable differences between the clones, however, were noted with respect to total soluble protein, peroxidase activity and lipid peroxidation. Remarkably the two clones responded differently to buthionine sulfoximine, an inhibitor of glutathione and/or phytochelatin synthesis, which inhibited root growth significantly in non-tolerant clone but not in the tolerant clone. Buthionine sulfoximine, nonetheless, could potentate cadmium toxicity in either of the clones, but more effectively in the tolerant clone. The high sensitivity of tolerant-clone to the combined treatment of BSO and Cd in the present study could, therefore, be attributed to the cumulative oxidative stress generated synergistically by BSO and Cd.