Effect of montmorillonite and kaolinite on nitrification in soil

A soil not naturally containing montmorillonite (M) was amended with approximately 5, 10 or 20% M or kaolinite (K), maintained in a greenhouse under periodic cultivating and alternate wetting and drying for more than two years, and then used in perfusion studies. The incorporation of M enhanced the rate of both heterotrophic degradation of glycine and subsequent autotrophic nitrification in direct relation to the amounts of M added. In soil amended with K, neither degradation nor nitrification was stimulated. The addition of M shortened the lag phase before nitrification was initiated, increased the pH of both the soil and the perfusates, and increased the rate, but not the extent, of oxidation of ammonium to nitrite and nitrate. The addition of CaCO₃ or MgCO₃, but not of CaSO₄, also enhanced the rate of nitrification. The effects observed may have resulted from the influence of M on the pH, buffering capacity, and other soil conditions necessary for maximum activity of nitrifying microorganisms.     

Urease gene‐containing Archaea dominate autotrophic ammonia oxidation in two acid soils

The metabolic traits of ammonia‐oxidizing archaea (AOA) and bacteria (AOB) interacting with their environment determine the nitrogen cycle at the global scale. Ureolytic metabolism has long been proposed as a mechanism for AOB to cope with substrate paucity in acid soil, but it remains unclear whether urea hydrolysis could afford AOA greater ecological advantages. By combining DNA‐based stable isotope probing (SIP) and high‐throughput pyrosequencing, here we show that autotrophic ammonia oxidation in two acid soils was predominately driven by AOA that contain ureC genes encoding the alpha subunit of a putative archaeal urease. In urea‐amended SIP microcosms of forest soil (pH 5.40) and tea orchard soil (pH 3.75), nitrification activity was stimulated significantly by urea fertilization when compared with water‐amended soils in which nitrification resulted solely from the oxidation of ammonia generated through mineralization of soil organic nitrogen. The stimulated activity was paralleled by changes in abundance and composition of archaeal amoA genes. Time‐course incubations indicated that archaeal amoA genes were increasingly labelled by ¹³CO₂ in both microcosms amended with water and urea. Pyrosequencing revealed that archaeal populations were labelled to a much greater extent in soils amended with urea than water. Furthermore, archaeal ureC genes were successfully amplified in the ¹³C‐DNA, and acetylene inhibition suggests that autotrophic growth of urease‐containing AOA depended on energy generation through ammonia oxidation. The sequences of AOB were not detected, and active AOA were affiliated with the marine Group 1.1a‐associated lineage. The results suggest that ureolytic N metabolism could afford AOA greater advantages for autotrophic ammonia oxidation in acid soil, but the mechanism of how urea activates AOA cells remains unclear.     

Nitrification in soils of secondary vegetational successions from Eucalyptus forest and grassland to cool temperate rainforest in Tasmania

Rates of nitrification in well drained granitic soils from forest stands and grassland of differing successional status and from beneath isolated individuals of several tree species were compared in a series of laboratory experiments. Fresh samples were perfused with distilled water or nutrient solution for 10 to 14 weeks at 20°C. The following treatments were applied to the soils singly and in combination: 200 and 400 g N g^–1 as (NH₄)₂SO₄; 100 g P g^–1 as KH₂PO₄; 4000 g CaCO₃ g^–1; inoculation of non-nitrifying soil with nitrifying soil; perfusion of nitrifying soil with leachate from non-nitrifying soil.Nitrification was absent or occurred at only a low rate in many soils; it generally increased as succession proceeded from nature grassland or eucalypt forest towards climax temperate rainforest, but decreased in mature climax forests. However, the influence of individual tree species was often paramount. Nitrification was stimulated by disturbance of a stand by disease. A possible inhibitor of nitrification in a rainforest soil could not be removed by leaching with water, nor transferred via the leachate to a nitrifying soil. Addition of P was without effect on either total amount of nitrate produced or on net mineralisation of soil N, but sometimes increased the rate of nitrification of added ammonium. Non-nitrifying rainforest soil of pH 4.3 was induced to nitrify only after addition of (NH₄)₂SO₄, inoculation with a nitrifying soil, and addition of CaCO₃ to raise pH by 3 units. However, once nitrification had commenced it could continue with little change in rate while pH decreased to a value of 3.4.It was concluded that rate of nitrification is dependent upon the presence of particular tree species in a stand, upon its history of disturbance, and hence in part upon the stand's successional status. It is not limited by pHper se within the range found in these soils, although an increase in pH may be necessary to initiate nitrification. In some soils the rate of nitrification may be limited by the level of ammonium substrate, and nitrifiers are virtually absent from others. Overall microbial activity is limited by lack of utilisable carbon substrate.     

Autotrophic Ammonia-Oxidizing Bacteria Contribute Minimally to Nitrification in a Nitrogen-Impacted Forested Ecosystem

Deposition rates of atmospheric nitrogenous pollutants to forests in the San Bernardino Mountains range east of Los Angeles, California, are the highest reported in North America. Acidic soils from the west end of the range are N-saturated and have elevated rates of N-mineralization, nitrification, and nitrate leaching. We assessed the impact of this heavy nitrogen load on autotrophic ammonia-oxidizing communities by investigating their composition, abundance, and activity. Analysis of 177 cloned β-Proteobacteria ammonia oxidizer 16S rRNA genes from highly to moderately N-impacted soils revealed similar levels of species composition; all of the soils supported the previously characterized Nitrosospira clusters 2, 3, and 4. Ammonia oxidizer abundance measured by quantitative PCR was also similar among the soils. However, rates of potential nitrification activity were greater for N-saturated soils than for soils collected from a less impacted site, but autotrophic (i.e., acetylene-sensitive) activity was low in all soils examined. N-saturated soils incubated for 30 days with ammonium accumulated additional soluble ammonium, whereas less-N-impacted soils had a net loss of ammonium. Lastly, nitrite production by cultivated Nitrosospira multiformis, an autotrophic ammonia-oxidizing bacterium adapted to relatively high ammonium concentrations, was significantly inhibited in pH-controlled slurries of sterilized soils amended with ammonium despite the maintenance of optimal ammonia-oxidizing conditions. Together, these results showed that factors other than autotrophic ammonia oxidizers contributed to high nitrification rates in these N-impacted forest soils and, unlike many other environments, differences in nitrogen content and soil pH did not favor particular autotrophic ammonia oxidizer groups.     

Stimulation of NO and N2O emissions from soils by SO2 deposition

Sulfur dioxide (SO₂) in the atmosphere has been demonstrated to have many adverse impacts on the environment and human health. In this study, deposition of SO₂ ranging from 9.0 to 127.8 mg kg^?1 with an average of 35.7 mg S kg^?1 was found to substantially stimulate NO and N₂O emissions from soils in the humid subtropical areas of Hainan, Fujian, Jiangxi, and Yunnan provinces of China under field conditions. Laboratory tests indicated that the stimulations were mediated biologically as the effects were not observed in sterilized soils. Acidification of soil resulting from SO₂ deposition was not responsible for the stimulated NO and N₂O emissions alone as the stimulation did not occur by acidifying soil with HNO₃ treatment. By using the ¹⁵N tracing method, we found that the N₂O emissions stimulated by SO₂ deposition were from either denitrification, heterotrophic nitrification or both, but not from autotrophic nitrification. Therefore, atmospheric SO₂ deposition would most likely stimulate NO and N₂O emissions in acidic soils in which heterotrophic nitrification dominates NO and N₂O production and waterlogged soils in which denitrification dominates NO and N₂O production.     

Influence of Environmental Factors on Antagonism of Fungi by Bacteria in Soil: Nutrient Levels

The addition of 0.25, 0.5, or 1.0% glucose to a soil (K) amended with either 6% kaolinite (K6K) or montmorillonite (K6M) or the adjustment of the C/N ratio of the soils from 23/1 to 10/1 with NH₄NO₃ eliminated the inhibition of Aspergillus niger by Serratia marcescens, regardless of whether the fungus and bacterium were inoculated into the same or separate sites in the soils. The adjustment of the C/N ratio to 15/1 or of the C/P ratio from 1,000/1 to 100/1 with KH₂PO₄ did not eliminate the antagonism. However, with the higher glucose and NH₄NO₃ amendments, S. marcescens died out in the K and K6K (but not in the K6M) soils, apparently due to reductions in pH that resulted from the increased metabolism induced by added nutrients. In soils amended with CaCO₃, S. marcescens did not die out, but the inhibition of A. niger by S. marcescens or Agrobacterium radiobacter was eliminated or reduced by the addition of glucose, but not of NH₄NO₃, and was influenced by the clay mineralogy and pH of the soils. When NH₄NO₃ was added to the soils adjusted with CaCO₃ to pH values above 6.0, growth of A. niger was inhibited, regardless of whether bacteria were present or not, as a result of the volatilization of NH₃. Bacillus cereus and another species of Bacillus did not inhibit A. niger under any of the environmental conditions. There was a direct correlation between the degree of inhibition and the rate of glucose utilization by the various bacteria, indicating that the antagonism of A. niger by some bacteria in soil was the result primarily of a competition for carbon and that this competition was influenced by other environmental factors, such as pH and clay mineralogy.     

Influence of tree species and ground vegetation on nitrification in an acid forest soil

Soil N transformations were studied at Ironhill, near Liphook, UK as part of a forest fumigation experiment. Nitrification potential was measured in a humoferric podzol soil, of pH 3 (in 0.01 M CaCl₂). An initial experiment into nitrogen mineralisation potential indicated that nitrification was linked strongly to the species of coniferous tree growing in the soil. Transfer of soil solution between soils had no influence on mineralisation potential and allelopathic effects of the trees were not demonstrated. The initial finding was attributed subsequently to the type of ground vegetation and its management. Attempts to reproduce soil conditions, which promoted nitrification, were partially successful.Soil, from the Ironhill site, was incubated with various nitrogenous substrates and other nutrients and sources of carbon to test whether heterotrophs were responsible for nitrification. Organic N (which was ammonified) promoted nitrification, but the addition of ammonium was inhibitory unless supplied with a readily available carbon source such as acetate. Nitrification potential was unaffected when soils were incubated with an inhibitor of autotrophic nitrification. The results of these experiments supported strongly the hypothesis that heterotrophic organisms were responsible for nitrification in this soil.     

Fertilization influences nitrogen dynamics in soils under Dalbergia sissoo

The influence of added ammonium, phosphorus, potassium, and gypsum on net nitrogen mineralization was studied in soil beneath a six-year-old plantation of the N₂-fixing tree Dalbergia sissoo in Pakistan. Soil with and without amendments was placed in polyethylene bags and incubated, buried in the soil, for 30 days. After that time the soil was analyzed and net ammonium and nitrate production and net nitrogen mineralization were calculated. The addition of ammonium stimulated nitrification indicating that the process was substrate limited. The inhibition of nitrification by Nitrapyrin showed that the process is autotrophic in these soils. Gypsum addition lowered soil pH from 8.0 to 7.2 and significantly stimulated ammonification, nitrification and net nitrogen mineralization. The addition of potassium more than tripled the soil K:Na ratio. Net ammonium and nitrate production and net nitrogen mineralization all increased in this treatment. The addition of phosphorus had no significant effect on soil nitrogen dynamics.     

Nitrification and nitrogen mineralization in a lowland rainforest succession in Costa Rica,Central America

Summary Nitrogen availability is a critical component of productivity in successional lowland rainforests, and nitrogen losses from a given system may largely depend on rates of nitrification in soils of the system. Two hypotheses were tested in a study of a 6-point secondary rainforest sere in the coastal lowlands of Costa Rica: that nitrification and N mineralization change in a directed fashion in lowland rainforest successions, and that nitrification is regulated by ammonium availability at all points along the sere. Nitrate and mineral N production were measured in short-term laboratory incubations of soils from different stages of secondary succession corresponding to 0, 3, 8, 16, 31 and 60 + years following disturbance. Results indicate that nitrification increases through the first 4 successional stages and then declines somewhat before leveling off. In soil from all sites, most of the N mineralized was nitrified, and added NH₄Cl strikingly stimulated net nitrate production. Added NaH₂PO₄, CaCO₃, and CaSO₄ did not stimulate net nitrate production or did not result in a greater proportion of nitrate than in controls. These results suggest that nitrification and N mineralization may tend to increase through secondary rainforest succession and that ammonium availability along the sere regulates rates of nitrification.     

The contribution of nitrogen transformation processes to total N2O emissions from soils used for intensive vegetable cultivation

The rapid expansion of intensively farmed vegetable fields has substantially contributed to the total N₂O emissions from croplands in China. However, to date, the mechanisms underlying this phenomenon have not been completely understood. To quantify the contributions of autotrophic nitrification, heterotrophic nitrification, and denitrification to N₂O production from the intensive vegetable fields and to identify the affecting factors, a ¹⁵N tracing experiment was conducted using five soil samples collected from adjacent fields used for rice-wheat rotation system (WF), or for consecutive vegetable cultivation (VF) for 0.5 (VF1), 6 (VF2), 8 (VF3), and 10 (VF4) years. Soil was incubated under 50% water holding capacity (WHC) at 25°C for 96 h after being labeled with ¹⁵NH₄NO₃ or NH ₄ ¹⁵ NO₃. The average N₂O emission rate was 24.2 ng N?kg^?1 h^?1 in WF soil, but it ranged from 69.6 to 507 ng N?kg^?1 h^?1 in VF soils. Autotrophic nitrification, heterotrophic nitrification and denitrification accounted for 0.3–31.4%, 25.4–54.4% and 22.5–57.7% of the N₂O emissions, respectively. When vegetable soils were moderately acidified (pH, 6.2 to ?≥?5.7), the increased N₂O emissions resulted from the increase of both the gross autotrophic and heterotrophic nitrification rates and the N₂O product ratio of autotrophic nitrification. However, once severe acidification occurred (as in VF4, pH?≤?4.3) and salt stress increased, both autotrophic and heterotrophic nitrification rates were inhibited to levels similar to those of WF soil. The enhanced N₂O product ratios of heterotrophic nitrification (4.84‰), autotrophic nitrification (0.93‰) and denitrification processes were the most important factors explaining high N₂O emission in VF4 soil. Data from this study showed that various soil conditions (e.g., soil salinity and concentration of NO ₃ ^- or NH ₄ ⁺ ) could also significantly affect the sources and rates of N₂O emission.     

Ability of nitrapyrin,dicyandiamide and acetylene to retard nitrification in a mineral and an organic soil

Laboratory experiments were conducted to evaluate the efficacy of nitrapyrin, dicyandiamide (DCD) and acetylene (C₂H₂) as nitrification inhibitors in a silt loam and oragnic soil with and without added NH₄. Nitrapyrin (8 μg/g soil) and DCD (20 μg/g soil) were very effective in retarding nitrification of NH₄−N in the silt loam soil during 14 days of aerobic incubation at 30°C. However neither nitrapyrin, (20 μg/g soil) nor DCD (20 or 100 μg/g soil) were effective in retarding NO₃ production in the organic soil not amended with NH₄. Dicyandiamide was moderately effective in retarding nitrification (39% inhibition) at 100 μg/g concentration but nitrapyrin at 20 μg/g rate had little effect (8% inhibition) on nitrification in the organic soil amended with NH₄. In a separate experiment C₂H₂ was a very effective inhibitor in both soils when present in the flask atmosphere at 0.1% or 1% (v/v).     

Sulphur fractionation in calcareous soils and bioavailability to plants

Sulphur fractionation and availability to plants are poorly understood in calcareous soils. Sixty-four calcareous soils containing varying amounts of CaCO₃ were collected from ten provinces in China and their S fractions determined. Organic S was the predominant fraction of S, accounting for on average 77% of the soil total S. The amounts of adsorbed sulphate were found to be negligible. 1 M HCl extracted substantially more sulphate than either 0.01 M CaCl₂ or 0.016 M KH₂PO₄, indicating the existence of water-insoluble but acid-soluble sulphate, probably in the form of sulphate co-precipitated with CaCO₃. The concentrations of water-insoluble sulphate correlated positively with the contents of CaCO₃ and accounted for 0.03–40.3% (mean 11.7%) of soil total S. To test the bioavailability of water-insoluble sulphate, a sulphate-CaCO₃ co-precipitate labelled with ³⁵S was prepared and added to a calcareous soil in a pot experiment with either NH₄⁺ or NO₃^– as the N source. In 29 days, wheat plants took up 10.6% and 3.0% of the ³⁵S added to the soil in the NH₄⁺ and NO₃^– treatments, respectively. At the end of the pot experiment, the decrease of water-insoluble, acid-soluble, sulphate was more apparent in the NH₄⁺ than in the NO₃^– treatment. The results indicate that sulphate co-precipitated with CaCO₃ in calcareous soils may become partly available for plant uptake, depending on rhizosphere pH, if the field precipitate is similar to the laboratory prepared sample studied.     

Autotrophic ammonia-oxidizing bacteria contribute minimally to nitrification in a nitrogen-impacted forested ecosystem

Deposition rates of atmospheric nitrogenous pollutants to forests in the San Bernardino Mountains range east of Los Angeles, California, are the highest reported in North America. Acidic soils from the west end of the range are N-saturated and have elevated rates of N-mineralization, nitrification, and nitrate leaching. We assessed the impact of this heavy nitrogen load on autotrophic ammonia-oxidizing communities by investigating their composition, abundance, and activity. Analysis of 177 cloned beta-Proteobacteria ammonia oxidizer 16S rRNA genes from highly to moderately N-impacted soils revealed similar levels of species composition; all of the soils supported the previously characterized Nitrosospira clusters 2, 3, and 4. Ammonia oxidizer abundance measured by quantitative PCR was also similar among the soils. However, rates of potential nitrification activity were greater for N-saturated soils than for soils collected from a less impacted site, but autotrophic (i.e., acetylene-sensitive) activity was low in all soils examined. N-saturated soils incubated for 30 days with ammonium accumulated additional soluble ammonium, whereas less-N-impacted soils had a net loss of ammonium. Lastly, nitrite production by cultivated Nitrosospira multiformis, an autotrophic ammonia-oxidizing bacterium adapted to relatively high ammonium concentrations, was significantly inhibited in pH-controlled slurries of sterilized soils amended with ammonium despite the maintenance of optimal ammonia-oxidizing conditions. Together, these results showed that factors other than autotrophic ammonia oxidizers contributed to high nitrification rates in these N-impacted forest soils and, unlike many other environments, differences in nitrogen content and soil pH did not favor particular autotrophic ammonia oxidizer groups.     

Effect of ammonium and nitrate application on the NO and N2O emission out of different soils

The effect of nitrate and ammonium application (0, 50, 100 and 150 mg N kg^-1 soil) was studied in an incubation experiment. Four Belgian soils, selected for different soil characteristics, were used. The application of both nitrate and ammonium caused an increase of the NO and N₂O emission. The NO production from nitrate and ammonium was found to be of the same order of magnitude. At low pH the NO production was found to be highest from nitrate, at higher pH values the production was found to be higher from ammonium. This seems to be the result of the negative effect of low pH on nitrification.The ANOVA analysis was carried out to separate the effect of the form of nitrogen, quantily of N applied and soil characteristics. The total production of NO was found to depend for 97% on the soil characteristics and for 3% on the quantity of N added. The total N₂O production depended for 100% on the soil characteristics.Stepwise regression analysis showed that the total NO production was best predicted by a combination of the factors CaCO₃ content and NH₄ ⁺ concentration in the soil. Total N₂O production was best described by a combination of CaCO₃, water soluble carbon (WSC) and sand-content.The N₂O/NO ratio was found to be highly variable, indicating that their productions react differently to changes in conditions, or are partly independent.It may be concluded that to NO and N₂O from soils both nitrification and denitrification may be equally important, their relative importance depending on local conditions such as substrate availability, water content of the soil etc. However, the NO production seems to be more nitrification dependent than the N₂O production. ei]{gnE}{fnMerckx}{edSection editor}     

Effect of high rates of sulphur on the CaCO3 and CaSO4 content of calcareous soils

Samples of two calcareous soils from central Iraq were amended with 2, 6 and 10 mg g⁻¹ soil of agriculturegrade sulphur and incubated for 4, 8 and 12 weeks at 30°C and 70% water-holding capacity. At the end of each incubation period, soils were analyzed for sulphate, CaCO₃ and CaSO₄. The sulphate content of the soils increased, whereas the CaCO₃ content decreased, with increasing S levels and incubation time. The gypsum formed was in proportion to the sulphur oxidised and the calcium released from CaCO₃.     

Recovery of Soil Ammonia Oxidation After Long-Term Zinc Exposure Is Not Related to the Richness of the Bacterial Nitrifying Community

A soil sterilization–reinoculation approach was used to manipulate soil microbial diversity and to assess the effect of the diversity of the ammonia-oxidizing bacteria (AOB) on the recovery of the nitrifying community to metal stress (zinc). Gamma-irradiated soil was inoculated with 13 different combinations of up to 22 different soils collected worldwide to create varying degrees of AOB diversity. Two months after inoculation, AOB amoA DGGE based diversity (weighted richness) varied more than 10-fold among the 13 treatments, the largest value observed where the number of inocula had been largest. Subsequently, the 13 treatments were either or not amended with ZnCl₂. Initially, Zn amendment completely inhibited nitrification. After 6 months of Zn exposure, recovery of the potential nitrification activity in the Zn amended soils ranged from <10 % to >100 % of the potential nitrification activity in the corresponding non-amended soils. This recovery was neither related to DGGE-based indices of AOB diversity nor to the AOB abundance assessed 2 months after inoculation (p?>?0.05). However, recovery was significantly related (r?=?0.75) to the potential nitrification rate before Zn amendment and only weakly to the number of soil inocula used in the treatments (r?=?0.46). The lack of clear effects of AOB diversity on recovery may be related to an inherently sufficient diversity and functional redundancy of AOB communities in soil. Our data indicate that potential microbial activity can be a significant factor in recovery.     

Use of Aliphatic n-Alkynes To Discriminate Soil Nitrification Activities of Ammonia-Oxidizing Thaumarchaea and Bacteria

Ammonia (NH₃)-oxidizing bacteria (AOB) and thaumarchaea (AOA) co-occupy most soils, yet no short-term growth-independent method exists to determine their relative contributions to nitrification in situ. Microbial monooxygenases differ in their vulnerability to inactivation by aliphatic n-alkynes, and we found that NH₃ oxidation by the marine thaumarchaeon Nitrosopumilus maritimus was unaffected during a 24-h exposure to ≤20 μM concentrations of 1-alkynes C₈ and C₉. In contrast, NH₃ oxidation by two AOB (Nitrosomonas europaea and Nitrosospira multiformis) was quickly and irreversibly inactivated by 1 μM C₈ (octyne). Evidence that nitrification carried out by soilborne AOA was also insensitive to octyne was obtained. In incubations (21 or 28 days) of two different whole soils, both acetylene and octyne effectively prevented NH₄⁺-stimulated increases in AOB population densities, but octyne did not prevent increases in AOA population densities that were prevented by acetylene. Furthermore, octyne-resistant, NH₄⁺-stimulated net nitrification rates of 2 and 7 μg N/g soil/day persisted throughout the incubation of the two soils. Other evidence that octyne-resistant nitrification was due to AOA included (i) a positive correlation of octyne-resistant nitrification in soil slurries of cropped and noncropped soils with allylthiourea-resistant activity (100 μM) and (ii) the finding that the fraction of octyne-resistant nitrification in soil slurries correlated with the fraction of nitrification that recovered from irreversible acetylene inactivation in the presence of bacterial protein synthesis inhibitors and with the octyne-resistant fraction of NH₄⁺-saturated net nitrification measured in whole soils. Octyne can be useful in short-term assays to discriminate AOA and AOB contributions to soil nitrification.     

Availability of Mn as affected by carbonate addition

Summary Addition of CaCO₃ to the soils has been found to increase the retention of manganese applied to soils. As the black soil contained enough of CaCO₃ initially the addition of CaCO₃ even upto 16% is not effective. But in red soil the effect in marked.It has also been observed that addition of CaCO₃, at the rate of 1 to 8 per cent to H-soils, resulted in an increased retention of manganese.The E and r forms decrease and increase respectively with an increase in the addition of CaCO₃ addition to both original and H-soils.Addition of soluble carbonates has also been found to effect the retention of manganese.The availability of manganese added to soils in the soluble form has been found to be adversely affected by the addition of both soluble and in soluble carbonates to black, red, and alkali soils.     

The relative importance of autotrophic and heterotrophic nitrification in a conifer forest soil as measured by 15N tracer and pool dilution techniques

The importance of heterotrophic nitrification was studied in soil from a mixed-conifer forest. Three sites in the forest were sampled: a clear cut area, a young stand and a mature stand. In the mature stand, the mineral soil (0–10 cm) and the organic layer were sampled separately. Gross rates of N mineralization and nitrification were measured by¹⁵NH ₄ ⁺ and¹⁵NO ₃ ^– isotopic pool dilution, respectively. The rates of autotrophic and heterotrophic nitrification were distinguished by use of acetylene as a specific inhibitor of autotrophic nitrification. In samples supplemented with¹⁵NH ₄ ⁺ and treated with acetylene, no¹⁵NO ₃ ^– was detectable showing that the acetylene treatment effectively blocked the autotrophic nitrification, and that NH ₄ ⁺ was not a substrate for heterotrophic nitrification. In the clear cut area, autotrophic nitrification was the most important NO ₃ ^– generating process with total nitrification (45 ug N kg^–1h^–1) accounting for about one-third of gross N mineralization (140 ug N kg^–1 h^–1). In the young and mature forested sites, gross nitrification rates were largely unaffected by acetylene treatment indicating that heterotrophic nitrification dominated the NO ₃ ^– generating process in these areas. In the mature forest mineral and organic soil, nitrification (heterotrophic) was equal to only about 5% of gross mineralization (gross mineralization rates of 90 ug N kg^–1 h^–1 mineral; 550 ug N kg^–1 h^–1 organic). The gross nitrification rate decreased from the clear cut area to the young forest area to the mineral soil of the mature forest (45; 17; 4.5 ug kg^–1 h^–1 respectively). The¹⁵N isotope pool dilution method, combined with acetylene as an inhibitor of autotrophic nitrification provided an effective technique for assessing the importance of heterotrophic nitrification in the N-cycle of this mixed-conifer ecosystem.     

Soil acidity and nutrient deficiency in central Amazonian heath forest soils

Experiments were carried out to test the effects of liming and nutrient additions on plant growth and soil processes such as C and N mineralisation in three contrasting forest types in central Amazonia: the stunted facies of heath forest (SHF), the tall facies of heath forest (THF) and the surrounding lowland evergreen rain forest (LERF). Calcium-carbonate additions increased soil respiration in the field plots in the SHF; in laboratory incubations, soil respiration was higher in the SHF when soils were fertilised with N, and in THF and LERF after S additions. The addition of N alone or in different combinations generally induced a net immobilisation of soil N. Net nitrification increased during the incubation in SHF and THF soils fertilised with N+P, and in LERF soils fertilised with either N, or P, or CaCO₃. In a field experiment using ingrowth bags, a higher fine root production was observed in all forest types when bags were fertilised with CaCl₂ or CaCO₃, suggesting that Ca may be a limiting nutrient in these soils. Calcium-carbonate addition in a glasshouse bioassay experiment with rice showed an overall positive effect on the survival and growth of the seedlings. In other treatments where soil pH was not raised, the rice showed acute toxicity symptoms, poor root and shoot growth and high mortality. Similar results were yielded in a field experiment, using naturally established seedlings in the field plots in SHF, THF and LERF. It is concluded that the acute H⁺ ion toxicity is a major growth-limiting factor for non-adapted plants in heath forest soils in central Amazonia.