A regulatory system controlling the production of cytochrome aa3 in Neurospora crassa

Summary The mitochondria of the cyt-2-1, cya-3-16, cya-4-23 and 299-1 nuclear mutants and the [mi-3] and [exn-5] cytoplasmic mutants of Neurospora crassa are deficient in cytochrome aa ₃, while the cyb-1-1 and cyb-2-1 mutants have mitochondrial b-cytochrome dificiencies. However, the mitochondria from cyb-1-1 cyt-2-1, cyb-1-1 [mi-3] and cyb-2-1 [mi-3] double mutants contain 30% to 50% of the amount of cytochrome aa ₃ that is present in mitochondria from wild-type; i.e. cyb-1-1 and cyb-2-2 act as suppressors of the cytochrome aa ₃ deficiency phenotypes that are associated with the cyt-2-1 and [mi-3] mutations.The production of cytochrome aa ₃ can be induced in cyt-2-1 and [mi-3] by growing cells in medium containing antimycin A, an inhibitor of electron transport in the cytochrome bc ₁ segment of the mitochondrial electrontransport chain. Moreover, the growth of the [mi-3] mutant is strongly stimulated by low concentrations of antimycin A. The induction of cytochrome aa ₃ by antimycin treatments does not occur in [exn-5], cya-4-23 and 299-1 cells, but does take place in cya-3-16 cells.Although some of the seven constituent polypeptides of cytochrome aa ₃ are present the mitochondria of [mi-3], the holoenzyme complex is not formed in the mutant. In contrast, the mitochondria of cyb-1-1 [mi-3] and cyb-2-2 [mi-3] double mutants contain a fully assembled cytochrome oxidase complex as well as some unassembled subunit polypeptides.The observations are indicative of the existence of at least two regulatory systems controlling the production of cytochrome aa ₃. One of the circuits appears to control the basal or constitutive production of cytochrome oxidase, the other seems to coordinate the level of cytochrome aa ₃ with some function of the mitochondrial cytochrome bc ₁ complex, possibly electron transport.     

Biochemical and biophysical studies on cytochrome aa3. VII. The effect of cytochrome c on the oxidation-reduction potential of isolated cytochrome aa3

1.

1. In the absence of cytochrome c, the haem groups of cytochrome aa₃ titrate as indistinguishable identities, each having E′_o = 280 mV and n = 1.     

Time-resolved single-turnover of ba3 oxidase from Thermus thermophilus

The kinetics of the oxidation of fully-reduced ba₃ cytochrome c oxidase from Thermus thermophilus by oxygen were followed by time-resolved optical spectroscopy and electrometry. Four catalytic intermediates were resolved during this reaction. The chemical nature and the spectral properties of three intermediates (compounds A, P and O) reproduce the general features of aa₃-type oxidases. However the F intermediate in ba₃ oxidase has a spectrum identical to the P state. This indicates that the proton taken up during the P → F transition does not reside in the binuclear site but is rather transferred to the covalently cross-linked tyrosine near that site. The total charge translocation associated with the F → O transition in ba₃ oxidase is close to that observed during the F → O transition in the aa₃ oxidases. However, the P_R → F transition is characterized by significantly lower charge translocation, which probably reflects the overall lower measured pumping efficiency during multiple turnovers.     

Synthesis and characterization of new AMTTO-imine-ligands and their silver(I) complexes: crystal structures of TAMTTO, [Ag2(TAMMTO)4](NO3)2 · 4MeOH, [Ag(TAMTTO)(PPh3)2]NO3 · 1.5THF, [Ag(FAMTTO)(PPh3)2]NO3

Reaction of 4-amino-6-methyl-1,2,4-triazin-thione-5-one (AMTTO, 1) with 2-thiophenecarboxaldehyde and 2-furaldehyde led to the corresponding iminic compounds 6-methyl-4-[thiophene-2-yl-methylene-amino]-3-thioxo-[1,2,4]-triazin-3,4-dihydro(2H)-5-one (TAMTTO, 2) and 4-[furan-2-yl-methylene-amino]-6-methyl-3-thioxo-[1,2,4]-triazin-3,4-dihydro(2H)-5-one (FAMTTO, 3). Treatment of 2 with AgNO₃ gave the complex [Ag₂(TAMMTO)₄](NO₃)₂ · 4MeOH (4) and of 2 and 3 with [Ag(PPh₃)₂]NO₃ gave the complexes [Ag(TAMTTO)(PPh₃)₂]NO₃ · 1.5THF (5) and [Ag(FAMTTO)(PPh₃)₂]NO₃ (6), respectively. All the compounds have been characterized by elemental analyses, IR spectroscopy and mass spectrometry. Compound 2 and all the complexes have been characterized by X-ray diffraction studies, respectively. In addition, 5 and 6 have been characterized by ³¹P NMR spectroscopy. Crystal data for 2 at −80 °C: monoclinic, space group C2/c, a=2319.6(2), b=609.8(1), c=1673.6(2) pm, β=106.14(1)°, Z=8, R₁=0.0523; for 4 at −80 °C: triclinic, space group , a=877.6(1), b=1085.2(1), c=1557.7(2) pm, α=77.14(1)°, β=80.87(1)°, γ=78.18(1)°, Z=1, R₁=0.0407; for 5 at 20 °C: triclinic, space group , a=1151.1(2), b=1225.1(2), c=1887.4(3) pm, α=78.04(1)°, β=86.20(1)°, γ=76.03(1)°, Z=2, R₁=0.0662; for 6 at −80 °C: triclinic, space group , a=1189.7(2), b=1387.8(2), c=1410.9(2) pm, α=94.74(2)°, β=95.12(2)°, γ=112.41(2)°, Z=2, R₁=0.0511.     

Synthesis, structure and properties of TTF-carboxylate bridged paddlewheel dirhodium complexes, Rh2(BuCO2)3(TTFCO2) and Rh2(BuCO2)2(TTFCO2)2

Reaction of tetrathiafulvalene carboxylic acid (TTFCO₂H) with paddlewheel dirhodium complex Rh₂(Bu^tCO₂)₄ yielded TTFCO₂-bridged complexes Rh₂(Bu^tCO₂)₃(TTFCO₂) (1) and cis- and trans-Rh₂(Bu^tCO₂)₂(TTFCO₂)₂ (cis- and trans-2). Their triethylamine adducts [1(NEt₃)₂] and cis-[2(NEt₃)₂] were purified and isolated with chromatographic separation, and characterized with single crystal X-ray analysis. Trans-[2(NEt₃)₂] is not completely separated from a mixture of cis- and trans-[2(NEt₃)₂], but its single crystals were obtained from a solution of the mixture. A three-step quasi-reversible oxidation process was observed for 1 in MeCN. The first two steps correspond to the oxidation of the TTFCO₂ moiety and the last one is the oxidation of the Rh₂ core. The oxidation of cis-2 is observed as a two-step process with very similar E_1/2 values to those of the first two processes for 1. Both 1⁺ and cis-2²⁺ in MeCN at room temperature show isotropic ESR spectra with a g value of 2.008 and a_H = 0.135 mT for two equivalent H atoms and a_H = 0.068 mT for one H atom. The redox and ESR data of cis-2 suggest that the intramolecular interaction between the TTF moieties is very small.     

Synthesis and structures of bimetallic silicon-containing imido alkylidene complexes of molybdenum Me2Si[CHMo(NAr)(ORF3)2]2 and PhVinSi[CHMo(NAr)(ORF3)2]2

Bimetallic alkylidene complexes of molybdenum (R_F3O)₂(ArN)MoCH-SiMe₂-CHMo(NAr)(OR_F3)₂ (1) and (R_F3O)₂(ArN)MoCH-SiPhVin-CHMo(NAr)(OR_F3)₂ (2) (Ar = 2,6-C₆H₃; R_F3 = CMe₂CF₃) have been prepared by the reactions of vinyl silicon reagents Me₂Si(CHCH₂)₂ and PhSi(CHCH₂)₃ with known alkylidene compound PhMe₂C-CHMo(NAr)(OR_F3)₂. Complexes 1 and 2 were structurally characterized. Ring opening metathesis polymerization (ROMP) of cyclooctene using compounds 1 and 2 as initiators led to the formation of high molecular weight polyoctenamers with predominant trans-units content in the case of 1 and predominant cis-units content in the case of 2.     

Sn-S and Ru-Ru bonds cleavage reactions between [Ph3SnS(CH2)3SSnPh3] and Ru3(CO)12: X-ray crystal structures of [Ph3SnS(CH2)3SSnPh3] and trans-[Ru(CO)4(SnPh3)2]

The organotin complex [Ph₃SnS(CH₂)₃SSnPh₃] (1) was synthesized by PdCl₂ catalyzed reaction between Ph₃SnCl and disodium-1,3-propanedithiolate which in turn was prepared from 1,2-propanedithiol and sodium in refluxing THF. Reaction of 1 with Ru₃(CO)₁₂ in refluxing THF affords the mononuclear complex trans-[Ru(CO)₄(SnPh₃)₂] (2) and the dinuclear complex [Ru₂(CO)₆(μ-κ²-SCH₂CH₂CH₂S)] (3) in 20 and 11% yields, respectively, formed by cleavage of Sn-S bond of the ligand and Ru-Ru bonds of the cluster. Treatment of pymSSnPPh₃ (pymS = pyrimidine-2-thiolate) with Ru₃(CO)₁₂ at 55-60 °C also gives 2 in 38% yield. Both 1 and 2 have been characterized by a combination of spectroscopic data and single crystal X-ray diffraction analysis.     

Pyridine and phosphine reactions with [CPh3][B(C6F5)4]

Trityl borate salts [4-RPyCPh₃][B(C₆F₅)₄] (R = H 1, ^tBu 2, Et 3, NMe₂4) and [R₃PCPh₃][B(C₆F₅)₄] (R = Me 5, ⁿBu 6, Ph[1] 7, p-MeC₆H₄8) are readily prepared via equimolar reaction of the appropriate pyridine or phosphine and trityl borate [CPh₃][B(C₆F₅)₄]. The analogous reactions of PⁱPr₃ affords the product [(p-ⁱPr₃P-C₆H₄)Ph₂CH][B(C₆F₅)₄] (9) while the corresponding reactions of Cy₃P and ^tBu₃P gave the cyclohexadienyl derivatives [(p-R₃PC₆H₅)CPh₂][B(C₆F₅)₄] (R = Cy 10, ^tBu 11). X-ray structures of 5 and 9 are reported.     

Rhenium(IV) cyanate complexes: Synthesis, crystal structures and magnetic properties of NBu4[ReBr4(OCN)(DMF)] and (NBu4)2[ReBr(OCN)2(NCO)3]

Two new rhenium(IV) mononuclear compounds of formula NBu₄[ReBr₄(OCN)(DMF)] (1) and (NBu₄)₂[ReBr(OCN)₂(NCO)₃] (2) (NBu₄ = tetrabutylammonium cation, OCN = O-bonded cyanate anion, NCO = N-bonded cyanate anion and DMF = N,N-dimethylformamide) have been synthesized and their crystal structures determined by single-crystal X-ray diffraction. 1 crystallizes in the monoclinic system with the space group P2₁/n, whereas 2 crystallizes in the triclinic one with as space group. In both complexes the rhenium atom is six-coordinated, in 1 by four Br atoms in the equatorial plane, and two trans-oxygen atoms, one of a DMF molecule and another one from a cyanato group, while in 2 by one bromide anion and five cyanate ligands, two of which are O-bonded and three N-bonded, forming a somewhat distorted octahedral surrounding. Magnetic susceptibility measurements on polycrystalline samples of 1 and 2 in the temperature range 1.9-300 K are interpreted in terms of magnetically isolated spin quartets with large values of the zero-field splitting (|2D| is ca. 41.6 and 39.2 cm⁻¹ for 1 and 2, respectively).     

Superoxide oxidase and reductase activity of cytochrome b559 in photosystem II

This study provides evidence for the superoxide oxidase and the superoxide reductase activity of cytochrome b₅₅₉ (cyt b₅₅₉) in PSII. It is reported that in Tris-treated PSII membranes upon illumination, both the intermediate potential (IP) and the reduced high potential (HP^red) forms of cyt b₅₅₉ exhibit superoxide scavenging activity and interconversion between IP and HP^red form. When Tris-treated PSII membranes were illuminated in the presence of spin trap EMPO, the formation of superoxide anion radical (O₂⁻) was observed, as confirmed by EPR spin-trapping spectroscopy. The observations that the addition of enzymatic (superoxide dismutase) and non-enzymatic (cytochrome c, α-tocopherol and Trolox) O₂⁻ scavengers prevented the light-induced conversion of IP ↔ HP^red cyt b₅₅₉ confirmed that IP and HP^red cyt b₅₅₉ are reduced and oxidized by O₂⁻, respectively. Redox changes in cyt b₅₅₉ by an exogenous source of O₂⁻ reconfirmed the superoxide oxidase and reductase activity of cyt b₅₅₉. Furthermore, the light-induced conversion of IP to HP^red form of cyt b₅₅₉ was completely inhibited at pH > 8 and by chemical modification of the imidazole ring of histidine residues using diethyl pyrocarbonate. We proposed that a change in the environment around the heme iron, induced by the protonation and deprotonation of His²² residue generates a favorable condition for the oxidation and reduction of O₂⁻, respectively.     

Mononuclear and dinuclear iridium and heterodinuclear iridium-rhodium complexes derived from 1,4-C6H4(CCSiMe3)2 as precursor

The labile iridium(I) precursor trans-[IrCl(C₈H₁₄)(PiPr₃)₂] (2), prepared in situ from [IrCl(C₈H₁₄)₂]₂ (1) and PiPr₃, reacted with equimolar amounts of 1,4-C₆H₄(CCSiMe₃)₂ (3) at 60 °C to give the mononuclear vinylidene complex trans-[IrCl(CC(SiMe₃)C₆H₄CCSiMe₃)(PiPr₃)₂] (4). From 2 and 3 in the molar ratio of 2:1, the dinuclear compound trans,trans-[(PiPr₃)₂ClIr(CC(SiMe₃)C₆H₄C(SiMe₃)C)IrCl(PiPr₃)₂] (5) was obtained. Reaction of 4 with [RhCl(PiPr₃)₂]₂ (6) at room temperature afforded the heterodinuclear alkyne(vinylidene) complex trans,trans-[(PiPr₃)₂ClIr(CC(SiMe₃)C₆H₄CCSiMe₃)RhCl(PiPr₃)₂] (7), which on heating at 45 °C was converted to the bis(vinylidene) isomer trans,trans-[(PiPr₃)₂ClIr(CC(SiMe₃)C₆H₄C(SiMe₃)C)RhCl(PiPr₃)₂] (8).     

Short-bite aminobis(phosphonite) containing olefinic functionalities, PhN{P(OC6H3(OMe-o)(C3H5-p))2}2: Synthesis and transition metal complexes

Short-bite aminobis(phosphonite) containing olefinic functionalities, PhN{P(OC₆H₃(OMe-o)(C₃H₅-p))₂}₂ (1) was synthesized by reacting PhN(PCl₂)₂ with eugenol in the presence of triethylamine. The ligand 1 acts as a bidentate chelating ligand toward metal complexes [M(CO)₄(C₅H₁₀NH)₂] forming [M(CO)₄{η²-PhN{P(OC₆H₃(OMe-o)(C₃H₅-p))₂}₂}] (M = Mo, 2; W, 3). The reaction between 1 and [CpFe(CO)₂]₂ leads to the cleavage of one of the P-N bonds due to the metal assisted hydrolysis to give a mononuclear complex [CpFe(CO){P(O)(OC₆H₃(OMe-o)(C₃H₅-p))₂}{PhN(H)(P(OC₆H₃(OMe-o)(C₃H₅-p))₂)}] (4). Treatment of 1 with gold(I) derivative, [AuCl(SMe₂)] resulted in the formation of a dinuclear complex, [(AuCl)₂{PhN{P(OC₆H₃(OMe-o)(C₃H₅-p))₂}₂}] (5) with a Au···Au distance of 3.118(2) Å indicating the possibility of aurophilic interactions. An equimolar reaction between 1 and [Ru(η⁶-p-cymene)Cl₂]₂ afforded a tri-chloro-bridged bimetallic complex [(η⁶-p-cymene)Ru(μ-Cl)₃Ru{PhN(P(OC₆H₃(OMe-o)(C₃H₅-p))₂)₂}Cl] (6). The crystal structures of 1-3 and 5 were established by single crystal X-ray diffraction studies.     

Synthesis and characterization of isopropylamine complexes of lanthanide(II) diiodides: Molecular structure of TmI2(PrNH2)4 and EuI2(PrNH2)4

It was found that the lanthanide diiodides LnI₂ (1) (Ln = Nd, Sm, Eu, Dy, Tm, Yb) are dissolved in isopropylamine (IPA) without redox transformations. Stability of the formed solutions decreases in a row Eu ≈ Yb > Sm > Tm > Dy > Nd. Removing of a solvent in vacuum leaves complexes LnI₂(IPA)_x (2) (Nd, x = 5; Sm, Eu, Dy, Tm, Yb, x = 4) as crystalline colored solids. Stability of 2-Nd,Dy,Tm is higher than that of known THF or DME coordinated salts. Divalent state of metal in the products is confirmed by data of UV-Vis spectroscopy, magnetic measurements and their chemical behavior. Structure of 2-Eu and 2-Tm was established by X-ray diffraction analysis. Oxidation of 2-Nd,Dy in IPA affords amine-amides (PrⁱNH)Ln(IPA)_y (3) (Nd, y = 4; Dy, x = 3). n-Propylamine also dissolves the iodides 1-Sm,Eu,Dy,Tm,Yb but stability of the solutions is significantly lower. 1-Nd vigorously reacts with PrⁿNH₂ even at −30 °C which hampers the formation of the solution.     

Syntheses and characterization of the W(II) and W(III) N2 complexes, [WCl2(PMe3)3]2N2 and [WCl3(PMe3)2]2N2

Refluxing WCl₄(PMe₃)₃ under a nitrogen atmosphere in the presence of two equivalents of sodium amalgam leads to a reduction to the W(II) complex [cis,mer-WCl₂(PMe₃)₃]₂N₂ (1), which can be converted to [mer,trans-WCl₃(PMe₃)₂]₂N₂ (2) via appropriate oxidation/chlorination. Structural data have been obtained for both complexes, and demonstrate significantly increased steric crowding in 1 due to PMe₃/PMe₃ interactions. The N-N bond distances in the two compounds are similar, at 1.279(4) and 1.243(18) Å, respectively.     

Solution-mediated syntheses and characterizations of two new zincophosphites [C6H14N2]0.5[Zn(H2PO3)2] and [C4H12N2]0.5[(CH3)2NH2][Zn2(HPO3)3]

Two new zincophosphites [C₆H₁₄N₂]_0.5[Zn(H₂PO₃)₂] 1 and [C₄H₁₂N₂]_0.5[(CH₃)₂NH₂][Zn₂(HPO₃)₃] 2 have been solvothermally synthesized in mixed solvents of N,N-dimethylformamide (DMF) and 1,4-dioxane (DOA), respectively. Single-crystal X-ray diffraction analysis reveals that compound 1 exhibits a neutral inorganic chain formed by ZnO₄ and HPO₂(OH) units. Interestingly, the left- and right-handed hydrogen-bonded helical chains are alternately formed via the hydrogen-bonds between two adjacent chains. Compound 2 exhibits a layer structure with 4- and 12-MRs formed by ZnO₄ and HPO₃ units, in which two kinds of organic amine molecules both act as countercations to compensate the overall negative electrostatic charge of the anionic network.     

Phosphane effects on formation and reactivity of [Ru(L)(PR3)(`N2Me2S2')] complexes with L=N2, N2H4, NH3, and CO

Metal-sulfur complex fragments, to which small molecules like N₂, N₂H₂, N₂H₄, NH₃, or CO can bind, are desirable model compounds concerning enzymatic N₂ fixation.This paper reports on the effects of the phosphane co-ligand on formation and reactivity of [Ru(L)(PR₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] [`N₂Me₂S₂'²⁻=1,2-ethanediamine-N,N^′-dimethyl-N,N^′-bis(2-benzenethiolate)(2−)] complexes with nitrogenase relevant ligands, especially N₂, N₂H₄, NH₃, and CO.Treatment of [Ru(NCCH₃)₄Cl₂] with Li₂`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>', excessive LiOMe, bulky PPh<sub>3</sub> or PCy<sub>3</sub>, respectively, led to the formation of two series of [Ru(L)(PR<sub>3</sub>)(`N₂Me₂S₂')] complexes [for R=Ph: 1b, 1c (L=NCCH₃), 6b (L=N₂H₄), 7b (L=N₂), 8b_1-3 (L=CO), 9b (L=NH₃); for R=Cy: 1a (L=NCCH₃), 6a (L=N₂H₄), 7a (L=N₂), 8a (L=CO), 9a (L=NH₃)]. While the use of PPh₃ (θ=145°) yielded cis,trans and cis,cis isomers of [Ru(NCCH₃)(PPh₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] (1b, 1c), no isomer formation was observed with the bulkier phosphane PCy<sub>3</sub> (θ=170°). Sterically less demanding phosphanes (θ=118-132°) afforded bisphosphane complexes [Ru(PR<sub>3</sub>)<sub>2</sub>(`N₂Me₂S₂')] [2d (R=Me), 2e (R=Et), 2f (R=nPr), and 2g (R=nBu)], which were practically inert and could only be converted in two cases and under drastic reaction conditions into the CO complexes [Ru(CO)(PR₃)(`N<sub>2</sub>Me<sub>2</sub>S<sub>2</sub>')] [4e (R=Et), 4f (R=nPr)]. The chelating bidentate phosphane dppe (bisdiphenylphosphanoethane) yielded exclusively the mononuclear complex [Ru(dppe)(`N₂Me₂S₂')] (3).     

Novel long bipyridine-type linking ligands containing an intervening naphthalene fragment: [Zn(L)(NO3)2], [Zn(L)(NO3)2], and [Cd(L)1.5(NO3)2] (L = (4-py)-CHN-C10H6-NCH-(4-py); L = (3-py)-CHN-C10H6-NCH-(3-py))

Novel bipyridine-type linking ligands L¹ ((4-py)-CHN-C₁₀H₆-NCH-(4-py)) and L² ((3-py)-CHN-C₁₀H₆-NCH-(3-py)), a pair of isomers due to possessing different pairs of terminal pyridyl groups, were prepared by the Schiff-base condensation. In ligand L¹, the N?N separation between the terminal pyridyl groups is 16.0 Å, with their nitrogen donor atoms at the para positions (4,4′). The corresponding N?N separation in ligand L² is 14.2 Å, with the nitrogen donor atoms at the meta positions (3,3′). 1-D zigzag-chain coordination polymers [Zn(L¹)(NO₃)₂] (1) and [Zn(L²)(NO₃)₂] (2) were prepared by reactions of Zn(NO₃)₂ · 6H₂O with ligands L¹ and L², respectively, by solution diffusion. Polymer 3, [Cd(L¹)_1.5(NO₃)₂], prepared from Cd(NO₃)₂ · 4H₂O and L¹, exhibits a 1-D ladder structure, whose repeating ladder unit consists of four Cd metals and four L¹ ligands to create a large 76-membered ring with dimensions of 20.8 × 20.8 Å. All products were structurally characterized by X-ray diffraction.