Fatty acid composition and the classification of the Porifera

The fatty acid content of 30 species of Porifera, including samples of Hexactinellida and Lithistida for which no fatty acid data previously existed, have been examined. The sponges are unique among animal phyla in diversity of fatty acids with generally high levels of long chain fatty acids (LCFAs; C_24–30, high unsaturation (mainly polyunsaturation), high incidence of branched and odd chain fatty acids. Further, peculiarities in proportions of individual acids of particular chain lengths distinguish the phylum. Hexactinellid fatty acid traits corresponded closely to those of Demospongiae while the calcareous species was atypical in exhibiting low levels of LCFAs and unsaturation. Seasonal and geographical influences on components of the fatty acid profile limit the extent to which this information can be utilized in a chemotaxonomic sense.     

Sterol composition and the classification of the demospongiae

The Demospongiae (Porifera) have yielded a wide range of novel and conventional sterols; a sample of 55 species screened and reported on have yielded 45 distinct sterol structures. The taxonomic relevance of the occurrence of particular sterols or overall sterol complement is evaluated and has proved to be informative in the case of the Verongida, Nepheliospongida, Axinellida and Hadromerida. A possible relationship between the occurrence of 26-methyl sterols and oviparous reproductive patterns within the Ceractinomorpha is noted. Sterol complement is observed to be qualitatively stable despite season and location of collection. High molecular weight sterols, present as major components, are probable membrane constituents. They afford an interesting parallel to the occurrence of diverse, high carbon fatty acids in sponge membranes.     

Fatty acid composition of fern spore lipids

Fatty acid composition of lipids isolated from spores of different fern groups show differences between the families whereas species variations within the families are smaller. As in seed fats, the spore lipids are mainly triglycerides, with the exception of Osmunda where free fatty acids accumulate. The spore lipids contain as major components oleic, linoleic, and palmitic acid although those of the sporophylls contain C-20 polyunsaturated acids.     

Fatty acids of sponges from the Sea of Okhotsk

The fatty acid (FA) composition of Demospongiae species from the Sea of Okhotsk was studied. Fifteen sponge species were investigated for the first time, and the previously studied species Desmacella rosea and Myxilla incrustans were reexamined for their FA composition. Gas chromatography-mass spectrometry revealed 150 different fatty acids, of which 15 have not been identified in sponge lipids previously. The relative content of saturated FAs varied from 7.6 in Melonachora kobjakovae to 29.6% in Amphilectus digitata, with an average of 14.6% of total FAs. The relative content of monoenic FAs ranged from 12.8 in T. dirhaphis to 27.0% in Polymastia sp., with an average of 20.6% of total FAs. Non-methylen-interrupted, primarily unsaturated Δ5,9-FAs contributed a significantly to the amount of polyunsaturated fatty acids of sponges; this being a distinguishing feature of the FA composition of the investigated group of organisms.     

Fatty acid composition of ten marine algae from australian waters

Detailed fatty acid analyses are reported for ten benthic algae from Australian waters of which the data for Cladophora fascicularis (Chlorophyta); Polysiphonia pungens, Porphyra sp., Centroceras clavatum (Rhodophyta); Hormosira banksii, Ralfsia sp., and Dictyota dichomota (Phaeophyta) are presented for the first time. The analyses report the exact molecular structure of component acids which is essential for taxonomic and food chain studies. The acid 16:4ω3 could be taxonomically distinguishing for species of the Chlorophyta. The occurrence of cis-vaccenic acid (18:1ω7) in the algae reported here suggests a distribution in marine benthic algae which is wider than hitherto realised, with particular taxonomic importance for Chlorophyta species in which it occurs in high levels. Corallina officinalis was found to contain the non-methylene interrupted acids 20:2 and 22:2.     

Intra-and interspecific variability of fatty acid composition of soft corals

The intra-and interspecific variability of fatty acid (FA) composition of soft corals was examined in the tropical alcyonarian Sarcophyton sp., tropical gorgonian Euplexaura erecta, and boreal alcyonarian Gersemia rubiformis. Characteristic significant differences in the FA composition were found between these species belonging to different taxonomic groups and habitats. We assume that the FA groups 14: 0 + 16: 0 + 18: 3n-6, 16: 2 + 20: 4n-6 + 24: 5n-6, and 18: 1n-7 + 20: 1n-7 + 20: 5n-3 + 24: 6n-3 are characteristic of Sarcophyton sp., E. erecta, and G. rubiformis respectively. There were no significant differences (p > 0.05) between the three soft coral species in the content of oleic, linoleic, and docosahexaenoic acids. The relative content of more than 45% of individual FA did not significantly differ (p > 0.05) between the pairs of species, i.e., intraspecific variations exceeded interspecific ones. The reasons for intraspecific variability of soft coral FA composition are discussed. Control of this variability is needed when using individual FA as chemotaxonomic and food markers.     

The fatty acid composition of fern lipids

Fatty acid compositions of the lipids isolated from the pinnae of four fern species show that they differ from those of the lipids in leaves of higher plants in having C-20 polyunsaturated acids, mainly arachidonic acid. As in higher plants, the ω-3 polyunsaturated acids are concentrated in the monogalactosyl diglycerides. Variations are found both in the fatty acid compositions and in the monogalactosyl/digalactosyl diglyceride ratio during the growing season.     

Chemotaxonomy of planktonic cyanobacteria based on non-polar and 3-hydroxy fatty acid composition

Twenty-eight axenio planktonic cyanobacterial strains (10 Microcystis, three Oscillatoria, one Spirulina, one Aphanizomenon, 13 Anabaena) were investigated for their fatty acid composition by measurement of non-polar and hydroxy fatty acids. No 2-hydroxy fatty acids were detected in any strain, but 3-hydroxy fatty acids were detected in minor quantities in 24 strains. The highest portion of total fatty acids were non-polar fatty acids. Qualitative and quantitative analyses of 3-hydroxy fatty acids showed no taxonomic value in these strains, while the type of non-polar fatty acid composition was shown to be consistent within Microcystis and Anabaena strains, distinguishing them as type 4, characterized by the presence of 18:4, and type 2, characterized by 18:3 (α) of the Kenyon-Murata system. Two Oscillatoria agardhii Gomont strains were also included in the type 2 group due to the presence of 18: 3 (α), but the difference in characteristics of 16:2 and 16:3 between O. agardhii and Anabaena further divided type 2 into two subgroups: type 2A for Anabaena and type 2B for O. agardhii. A simplified unweighted pair group method with arithmetic averages (UPGMA) dendrogram demonstrated that the classification of 28 strains (Microcystis spp., Anabaena spp., Aphanizomenon flos-aquae (Lemmermann) Ralfs f. gracile (Lemmermann) Elenkin, O. agardhii and Spirullnasubsalsa Oersted ex Gomont based on numerical analysis of non-polar fatty acids corresponded to morphological species criteria, suggesting that non-polar fatty acid composition is a valuable chemical marker in the taxonomy of planktonic cyanobacteria. However, the fatty acid composition in Oscillatoria raciborskii is similar to that of Microcystis and very different from that of O. agardhii, suggesting its special position in Oscillatoria and the chemical diversity in the genus Oscillatoria.     

Fatty acid composition in the classification of Saccharopolyspora hirsuta

The long-chain fatty acids of 4 Saccharopolyspora hirsuta strains were examined as their methyl and picolinyl esters using gas liquid chromatography (GLC) and GLC-mass spectrometry (GLC-MS). All the strains had similar fatty acid profiles composed mainly of isoanteiso-, and 10-methyl-branched components. Three new substituted 10-methyl-branched fatty acids were also detected and the major component identified as 10,15-dimethylhexadecanoic acid. The implications of these data for Saccharopolyspora systematics are discussed.     

The fatty acid composition of Ulothrix aequalis lipids

Fatty acid composition of the total lipids isolated from the fresh-water green alga Ulothrix aequalis shows that they resemble marine green algal lipids in having a high proportion of 16:4 ω-3 but differ in having only trace amounts of 18:4 ω-3. The distribution of ω-3 acids in the MGDG and DGDG fractions resembles that in green seaweeds and higher plants with the 16:4 ω-3 distribution in the Ulothrix fractions resemblmg that of 18:4 ω-3 in the corresponding fractions of the seaweeds.     

Fatty acid composition of the cold-water-inhabiting freshwater red alga Sirodotia Kylin

Four samples of freshwater alga Sirodotia (class Rhodophyceae) collected from two distinct streams in the Mahabaleshwar, Satara district (1,732 m a.s.l.) of the Western Ghats of Maharashtra (India) were analysed for their fatty acid content. The presence of 32 fatty acids was revealed, of which 13 were saturated (SFA), 8 were monounsaturated (MUFA) and 11 were polyunsaturated (PUFA) fatty acids. The major finding was the presence of three pharmaceutically and neutraceutically important PUFAs: arachidonic acid (AA), eicosapentanoeic acid (EPA), and docosahexanoiec acid (DHA). The major fatty acids identified were palmitic (16:0), cis-11,14 icodienoic (20:2), behenic (22:0), cis-8,11,14 eicosatrienoic(20:3n6), cis-4,7,10,13,16,19 docosahexanoeic (22:6n3), cis-13,16 docosadienoic (22:2), erucic (22:1n9), -5,8,11,14,17 eicosapentaenoic (20:5n3), trichosonoic (23:0), nervonic (24:0), arachidonic (20:4n6), cis-10 pentadecanoic (15:1), cis-11,14,17 eicosatrienoic (20:3n3), and myristic acid (14:0). The total PUFA contents ranged from 31.45 to 40.37%. The fatty acids were characterised by the relatively high abundance of PUFAs, while C20 unsaturated acids were appreciably more abundant than C18 unsaturated acids. This is the first report on fatty acid profiles of the genus Sirodotia.     

Phospholipid and acid composition of Nocardia and nocardoid bacteria as criteria of classification

Phospholipid and acid composition of 5 strains of ‘true’ Nocardia and 4 strains of nocardoid bacteria have been studied. A great homogeneity was found in all the Nocardia species: phospholipids consist of cardiolipin, phosphatidyl ethanolamine, phosphatidylinositol and phosphatidylinositol mannoside. Streptomyces (Nocardia) mediterranei did not contain phosphatidylinositol and Oerskovia (Nocardia) turbata had no phosphatidyl ethanolamine. The fatty acid composition of these phospholipids was determined and was found different in Nocardia and nocardoid species. Nocardia were rich in straight chain fatty acids and tuberculostearic acid while the phospholipids of nocardoid bacteria contained greater amounts of branched fatty acids. The fatty acids from acetone soluble lipids consisted of hydroxy and non-hydroxy compounds. Hydroxy acids were found in Nocardia which contained nocardic acids: high MW β-hydroxy α-branched acids and in S. mediterranei which contained β-hydroxy acids with 15–17 carbon atoms. Non-hydroxy acids were essentially palmitic and tuberculostearic acids in Nocardia species while S. mediterranei and O. turbata contained great amounts of iso acids from C₁₄ to C₁₇. Phospholipid and acid composition are discussed as criteria of taxonomic classification of Nocardia and related Actinomycetes.     

Congruence between nuclear and mitochondrial genes in Demospongiae: a new hypothesis for relationships within the G4 clade (Porifera: Demospongiae)

The current morphological classification of the Demospongiae G4 clade was tested using large subunit ribosomal RNA (LSU rRNA) sequences from 119 taxa. Fifty-three mitochondrial cytochrome oxidase 1 (CO1) barcoding sequences were also analysed to test whether the 28S phylogeny could be recovered using an independent gene. This is the largest and most comprehensive study of the Demospongiae G4 clade. The 28S and CO1 genetrees result in congruent clades but conflict with the current morphological classification. The results confirm the polyphyly of Halichondrida, Hadromerida, Dictyonellidae, Axinellidae and Poecilosclerida and show that several of the characters used in morphological classifications are homoplasious. Robust clades are clearly shown and a new hypothesis for relationships of taxa allocated to G4 is proposed.     

Fatty acid profiles of algae mark the development and composition of harpacticoid copepods

1. The value of algal fatty acids (FA) as diet biomarkers for benthic harpacticoid copepods was investigated. A high proportion of 18:1ω9 and 18:2ω6 FA was observed in the lipid reserve fraction of copepods fed with cyanobacteria. In contrast, a high proportion of 16:1ω7 and ω3 FA (including eicosapentaenoic) was present in the lipid reserve fraction of copepods grown on diatoms. 2. Copepods that were grown on cyanobacteria showed reduced survival and took 26% more time to develop from the first copepodid stage to adult than copepods that were grown on diatoms. Copepods feeding on the cyanobacteria showed reduced FA content when compared with animals fed with diatoms. This reduction in FA content was more pronounced in the apolar lipid fraction (mainly reserve lipids) than in the polar (mainly structural) lipid fraction. 3. The FA profiles of algae were used to calculate a function discriminating between diatoms and cyanobacteria. This function was applied to the FA profiles in the reserve lipid fraction of copepods and correctly classified copepod diet. 16:1ω7, 18:2ω6 and 20:5ω3 were the most important FA in the discriminant function. The suitability of this chemometric method to infer copepod diet was further tested by using algal class FA data from literature to derive the discriminant functions. The correct classification of the diet when the functions were applied to FA composition of the copepod reserve lipids suggests that this method may be employed in trophic web studies. 18:3ω3, 18:1ω9 and 16:1ω7 were the most important FA in the functions discriminating diatoms, cyanobacteria and green algae. The identification and quantification of the whole suit of 16:1ω7, 18:1ω9, 18:2ω6, 18:3ω3 and 20:5ω3 in trophic web studies is therefore of paramount importance to infer diet origin of aquatic herbivores. 4. The FA profile of copepod polar lipids did not reflect that of the diet. The presence of long chain polyunsaturated FAs in the polar lipid fraction of copepods feeding on the cyanobacterium suggests that C18 FAs from the diet may be elongated and desaturated by the copepod. The ability to elongate and desaturated FAs may reduce the importance of some FAs as diet biomarkers while it may turn the copepods into valuable trophic intermediaries in transferring organic matter from microorganisms to higher trophic levels.     

Fatty acids filamentous green algae

Fatty acid analyses of several filamentous green algae were conducted using gas-liquid chromatography. Two bryophytes were also examined. Qualitatively, the genera of algae studied were divided into two groups: (A) algae that have significant amounts of polyunsaturated C₂₀ fatty acids and (B) algae that lack or only have very small amounts of the C₂₀ acids. On the basis of fatty acid content, the algae of Group A more closely resemble the bryophytes than do the algae of Group B. Culture age was shown to cause quantitative but not qualitative variations in fatty acid content. It is evident from this study that extrapolation to land plants, from studies on the fatty acid content of the green algae, should include the filamentous forms.     

Fatty acid composition of Cladocera and Copepoda from lakes of contrasting temperature

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Fatty acid composition of mutants of the moss Physcomitrella patens

The fatty acid composition of various mutant strains of the moss Physcomitrella patens has been compared to the wild-type. These included strains defective in their responses to auxins and/or cytokinins, one which releases much more cytokinin into the medium than the wild-type, and two aphototropic strains. The lipids of the aphototropic mutants were also studied after culture in different light regimes. Although some differences in fatty acid composition have been found between strains, these alone are probably not responsible for their physiological differences. Considerable changes occur in many fatty acids in senescent or dark-grown material, including changes in the proportion of C₂₀ polyenoic fatty acids.     

Fatty acid composition of a new marine picoplankton species of the Chromophyta

A marine yellowish picoplankton, strain PP301, which was newly isolated from the surface seawater of the western Pacific Ocean was an eminent producer of polyunsaturated fatty acids. Its fatty acids were mostly shared by the shortest saturated form (14:0, 20–30%) and polyunsaturated forms (20:4, EPA and DHA) which accounted for about 50% of the total fatty acids. The amount of intermediate forms in 16 and 18 carbon chains were very little. This composition was consistently observed irrespective of the growth temperatures (15–35 °C).     

Sterol composition of the marine sponge Crambe crambe

The sterol content of the marine sponge Crambe crambe has been determined. The major components of the mixture are cholest-7-en3β-ol, 24-methylcholesta-7,22-dien-3β-ol and cholesta-7,22-dien-3β-ol. Significative quantities of the rare 4α-methyl-5α-cholest-8-en3β-ol are also present.