DNA C-values in seven families fill phylogenetic gaps in the basal angiosperms

The evolutionary significance of the c . 1000-fold range of DNA C-values in angiosperms (1C =  c . 0.1–127.4 pg) has often attracted interest. A recent analysis, which superimposed available C-value data onto the angiosperm phylogeny, that placed Ceratophyllaceae as the most basal angiosperm family led to the conclusion that ancestral angiosperms were characterized by small genomes (defined as 1C £ 3.5 pg). However, with the recent increase in DNA sequence data and large-scale phylogenetic analyses, strong support is now provided for Amborellaceae and/or Nymphaeaceae as the most basal angiosperm families, followed by Austrobaileyales (comprising Schisandraceae, Trimeniaceae and Austrobaileyaceae). Together these five families comprise the ANITA grade. The remaining basal angiosperm families (Ceratophyllaceae, Chloranthaceae and magnoliids), together with monocotyledons and eudicotyledons, form a strongly supported clade. A survey showed that C-value data were scarce in the basal angiosperm families, especially the ANITA grade. The present paper addresses these phylogenetic gaps by providing C-value estimates for each family in ANITA, together with C-values for species in Chloranthaceae, Ceratophyllaceae and a previously unrepresented family in the magnoliids, the Winteraceae.  © The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 140 , 175–179.     

CUTICULAR ANATOMY OF ANGIOSPERM LEAVES FROM THE LOWER CRETACEOUS POTOMAC GROUP. I. ZONE I LEAVES

Angiosperm leaf cuticles from the oldest part of the Potomac Group reinforce previous paleobotanical evidence for a Cretaceous flowering plant diversification. Dated palynologically as Zone I of Brenner (Aptian?), these remains show a low structural diversity compared to later Potomac Group and modern angiosperms. All cuticle types conform to a single plan of stomatal construction that is unusual in its extraordinary plasticity: both the number of subsidiary cells and their arrangement vary greatly on a single epidermis, such that the stomata might be classified as paracytic, anomocytic, laterocytic, and intermediate. Such stomatal diversity is uncommon in extant angiosperms but is known from a few Magnoliidae. Many species possess secretory cells comparable to the oil cells of modern Magnoliidae, and a few show the bases of probable uniseriate hairs. None of the cuticle types can be assigned to a single modern family, but several show similarities with Chloranthaceae and Illiciales. These results support the concept that subclass Magnoliidae includes some of the most primitive living angiosperms.     

Reconstructing the ancestral angiosperm flower and its initial specializations

Increasingly robust understanding of angiosperm phylogeny allows more secure reconstruction of the flower in the most recent common ancestor of extant angiosperms and its early evolution. The surprising emergence of several extant and fossil taxa with simple flowers near the base of the angiosperms-Chloranthaceae, Ceratophyllum, Hydatellaceae, and the Early Cretaceous fossil Archaefructus (the last three are water plants)-has brought a new twist to this problem. We evaluate early floral evolution in angiosperms by parsimony optimization of morphological characters on phylogenetic trees derived from morphological and molecular data. Our analyses imply that Ceratophyllum may be related to Chloranthaceae, and Archaefructus to either Hydatellaceae or Ceratophyllum. Inferred ancestral features include more than two whorls (or series) of tepals and stamens, stamens with protruding adaxial or lateral pollen sacs, several free, ascidiate carpels closed by secretion, extended stigma, extragynoecial compitum, and one or several ventral pendent ovule(s). The ancestral state in other characters is equivocal: e.g., bisexual vs. unisexual flowers, whorled vs. spiral floral phyllotaxis, presence vs. absence of tepal differentiation, anatropous vs. orthotropous ovules. Our results indicate that the simple flowers of the newly recognized basal groups are reduced rather than primitively simple.     

Specialized structures in the leaf epidermis of basal angiosperms: morphology, distribution, and homology

The morphology of specialized structures in the leaf epidermis of 32 species of basal (ANITA: Amborella, Nymphaeales, Illiciales, Trimeniaceae, and Austrobaileyaceae) angiosperms, representing all seven families and 11 of 14 genera, was investigated using light and scanning electron microscopy. Distribution, density, and size of structures were also measured, and character evolution was analyzed. Hydropotes are a synapomorphy of Nymphaeales and ethereal oil cells are a synapomorphy of Austrobaileyales, but uniseriate nonglandular trichomes appear to have arisen independently several times. Specialized structures are frequently characterized by adjacent epidermal cells that have striking similarities in their form and arrangement (i.e., architecture) to subsidiary cells of certain types of stomatal complexes. Additionally, forms intermediate to oil cells and stomata, to trichomes and stomata, and to hydropotes and oil cells are present in some taxa. Thus, all of these specialized structures and their adjacent epidermal cells form complexes that may be homologous with, and evolutionarily derived from stomatal complexes, and the specialized structure, or portion thereof, may be homologous to the stoma or guard mother cell. Improved knowledge of the morphology and evolution of these structures in the earliest branching extant angiosperm lineages has a bearing on many diverse areas of botany.     

Recognising angiosperm clades in the Early Cretaceous fossil record

Studies of the earliest Cretaceous angiosperms in the 1970s made only broad comparisons with living taxa, but discoveries of fossil flowers and increasingly robust molecular phylogenies of living angiosperms allow more secure recognition of extant clades. The middle to late Albian rise of tricolpate pollen and the first local dominance of angiosperm leaves mark the influx of near-basal lines of eudicots. Associated flowers indicate that palmately lobed ‘platanoids’ and Sapindopsis are both stem relatives of Platanus, while Nelumbites was related to Nelumbo (also Proteales) and Spanomera to Buxaceae. Monocots are attested by Aptian Liliacidites pollen and Acaciaephyllum leaves and Albian araceous inflorescences. Several Albian–Cenomanian fossils belong to Magnoliidae in the revised monophyletic sense, including Archaeanthus in Magnoliales and Virginianthus and Mauldinia in Laurales, while late Barremian pollen tetrads (Walkeripollis) are related to Winteraceae. In the basal ANITA grade, Nymphaeales are represented by Aptian and Albian flowers and whole plants (Monetianthus, Carpestella and Pluricarpellatia). Epidermal similarities of lower Potomac leaves to woody members of the ANITA grade are consistent with Albian flowers assignable to Austrobaileyales (Anacostia). Aptian to Cenomanian mesofossils represent both crown group Chloranthaceae (Asteropollis plant) and stem relatives of Chloranthaceae and/or Ceratophyllum (Canrightia, Zlatkocarpus, Pennipollis plant and possibly Appomattoxia).     

金粟兰科的起源,演化及其分布

本文利用形态解剖,孢粉学及化石资料,讨论了金粟兰科的系统;并对其起源,演化和现代分布格局形成等问题做了合理推测,主要结果如下：（１）Ｓａｒｃａｎｄｒａ和Ｃｈｌｏｒａｎｔｈｕｓ的亲缘关系最接近,而Ａｓｃａｒｉｎａ和Ｈｅｄｙｏｓｍｕｍ的系统位置最靠近。Ｓａｒｃａｎｄｒａ是金粟兰科中最原始的属,而Ｈｅｄｙｏｓｍｕｍ则是最进化的属。（２）金粟兰科可能于白垩纪最早期起源于木质部无导管的,具简单两性虫媒花的祖     

Timing in the evolution of derived floral characters: upper cretaceous (turonian) taxa with tricolpate and tricolpate-derived pollen

Various hypotheses that seek to explain the rich species diversity of angiosperms relative to other seed plants are briefly mentioned or reviewed. Of these, the subset that relates angiosperm diversity in some way to the relationship between angiosperms and insects, particularly anthophilous insects, is here the object of attention. Specifically, I address and reject the possibility that the relationship between angiosperm diversification and insects, particularly those demonstrating a preference for flowers with derived floral characteristics associated with insect pollination, may be ruled out because of asynchronous patterns of diversification in the fossil record. New data on floral structure from the Turonian of the Atlantic Coastal Plain reveal a surprising diversity of floral characters in taxa bearing tricolpate and tricolporate-derived pollen. The characters and taxa that appear in these Turonian sediments suggest that rather specific modes of insect pollination, perhaps involving highly derived insect pollinators, already existed at 90 Ma. Given the observed rate of diversification of angiosperms during that time and the pattern of evolution in insects, including what can be inferred about the history of the Apidae, these new floral data suggest that hypotheses relating angiosperm diversity to highly specific pollinators are still valid in the context of fossil evidence. Even so, consistency with fossil evidence is not necessarily proof of these relationships. In any case, there may well be multiple causes of relatively high angiosperm species diversity and understanding the relative importance of each of these requires neontological as well as paleontological investigations. One promising approach is to work within the context of phylogenetic patterns with more fossil data.     

The evolution of embryo size in angiosperms and other seed plants: implications for the evolution of seed dormancy

Abstract.— Seed dormancy plays an important role in germination ecology and seed plant evolution. Morphological seed dormancy is caused by an underdeveloped embryo that must mature prior to germination. It has been suggested that the presence of an underdeveloped embryo is plesiomorphic among seed plants and that parallel directional change in embryo morphology has occurred separately in gymnosperms and in angiosperms. We test these hypotheses using original data on embryo morphology of key basal taxa, a published dataset, and the generalized least squares (GLS) method of ancestral character state reconstruction. Reconstructions for embryo to seed ratio (E:S) using family means for 179 families showed that E:S has increased between the ancestral angiosperm and almost all extant angiosperm taxa. Species in the rosid clade have particularly large embryos relative to the angiosperm ancestor. Results for the gymnosperms show a similar but smaller increase. There were no statistically significant differences in E:S between basal taxa and any derived group due to extremely large standard errors produced by GLS models. However, differences between reconstructed values for the angiosperm ancestor and more highly nested nodes are large and these results are robust to topological and branch-length manipulations. Our analysis supports the idea that the underdeveloped embryo is primitive among seed plants and that there has been a directional change in E:S within both angiosperms and gymnosperms. Our analysis suggests that dormancy enforced by an underdeveloped embryo is plesiomorphic among angiosperms and that nondormancy and other dormancy types probably evolved within the angiosperms. The shift in E:S was likely a heterochronic change, and has important implications for the life history of seed plants.     

Stomatal characteristics of ferns and angiosperms and their responses to changing light intensity at different habitats

气孔是植物与大气环境进行气体交换的重要通道, 在调控植物碳水平衡方面发挥着重要作用。为探讨生境和植物类型对气孔形态特征的影响以及气孔对光强变化的响应格局在不同植物间和不同生境条件下的变异, 选取开阔生境和林下生境的5种蕨类植物和4种被子植物, 测定了它们的气孔形态特征和气孔导度对光强变化的响应。此外, 还收集了8篇文献中开阔和林下生境的45种蕨类植物和70种被子植物的气孔密度和气孔长度数据, 以增大样本量从而更好地探讨不同生境条件下蕨类和被子植物气孔密度及长度的变异格局, 并通过分析生境和植物类型对气孔形态特征的影响来推测生境和植物类型对气孔响应行为的可能影响。实验结果表明, 与林下植物相比, 开阔环境下的植物气孔密度更大, 气孔长度更小, 气孔对光强降低的响应更敏感; 但植物类型对气孔形态特征的影响以及对气孔响应光强的敏感程度的影响均不显著。对文献数据的分析表明, 生境和植物类型对气孔形态特征均有显著影响。考虑到气孔响应快慢与气孔形态特征密切相关, 与蕨类植物相比, 被子植物小而密的气孔可能为其更快地响应环境变化提供了基础。研究表明生境和植物类型对气孔响应行为均有显著影响。     

不同生境条件下蕨类和被子植物的气孔形态特征及其对光强变化的响应

气孔是植物与大气环境进行气体交换的重要通道, 在调控植物碳水平衡方面发挥着重要作用。为探讨生境和植物类型对气孔形态特征的影响以及气孔对光强变化的响应格局在不同植物间和不同生境条件下的变异, 选取开阔生境和林下生境的5种蕨类植物和4种被子植物, 测定了它们的气孔形态特征和气孔导度对光强变化的响应。此外, 还收集了8篇文献中开阔和林下生境的45种蕨类植物和70种被子植物的气孔密度和气孔长度数据, 以增大样本量从而更好地探讨不同生境条件下蕨类和被子植物气孔密度及长度的变异格局, 并通过分析生境和植物类型对气孔形态特征的影响来推测生境和植物类型对气孔响应行为的可能影响。实验结果表明, 与林下植物相比, 开阔环境下的植物气孔密度更大, 气孔长度更小, 气孔对光强降低的响应更敏感; 但植物类型对气孔形态特征的影响以及对气孔响应光强的敏感程度的影响均不显著。对文献数据的分析表明, 生境和植物类型对气孔形态特征均有显著影响。考虑到气孔响应快慢与气孔形态特征密切相关, 与蕨类植物相比, 被子植物小而密的气孔可能为其更快地响应环境变化提供了基础。研究表明生境和植物类型对气孔响应行为均有显著影响。     

Studies of Pollen Morphology and Its Systematic Position in the Order Piperales

The pollen morphology of 25 species and 10 genera of Piperales (Chloranthaceae, Piperaceae and Saururaceae) has been examined under light microscope, of which 7 species were observed under scanning electron microscope and 1 species, Hedyosmum orentale Merr. & Chun transmision electron microseope. Three principal types of pollen were found: anasulcate (mostly) (sometime trichotomosulcate), inaperturate (partly) and multicolpoidate (partly). The present article has discussed the palynological data mainly in relation to the classification and the systematic position of Cbloranthaceae and also deals with the systematic position of the order Piperales. The present author agrees to put the family Chloranthaceae into the order Piperales. Because this family differs from Piperaceae and Saururaceae in pollen morphology, therefore, Chloranthaceae should raise to the level of suborder. Among three families of the order Piperales, the present author considers Chloranthaceae to be the most primitive family, on account of the following reasons: 1. The family Chloranthaceae shows the characteristics of primitive entomophilous plants in the sculpture of exine, while in the other two families, Piperaceae and Saururaceae, their exine is almost smooth and represents wind-pollenated plants; 2. Pollen of the family Chloranthaceae are larger than those of Piperaceae and Saururaceae; 3. The fossil pollen Clavatipollenites has been proved to be one of the most primitive angiosperms on the earth, that it is known, it occurred in the early Cretaceous, and at that time ferns and gymnosperms were predominant, while the Chloran- thaceae has already existed at that time; 4. Sarcandra of Chloranthaceae possesses the characters of a vesselless secondary xylem and a delayed development of embryo. Thus, Chloranthaceae would be considered as the most primitive family in the order Piperales. The systematic position of the order Piperales is also discussed. Itutehinson makes a point that order Ranales is more primitive than Piperales, and his system is arranged in the following order: Ranales → Piperales → to climax family Chloranthaceae. This view-point, however, is net supported by the palynological data. Pollen morphology shows that Piperales is more primitive than Ranales, because the pollen in Piperales possess the ancient aperture type of Pteridospermes, i.e., the type of anasulcate aperture is prevailing in Piperales, moreover, pollen grains of Ranales are mainly tricolpate type, and tricolpate pollen is a characteristic of typical angiosperms. In addition, the Piperales possesses a series of characters that are common among monocots, but rare among dicots. As the divergence between dicer and monocot took place in the early Cretaceous, their ancestor possesses common chararcters both of dicots and monocots while the extant Piperales still possess many characters of monocots that indicate it is much nearer to the point of divergence, and it explains that the Piperales is closely related to the ancestor of monocots and dicers Piperales, therefore, is more primitive than Ranales.     

Tempo, mode and phylogenetic associations of relative embryo size evolution in angiosperms

Relative embryo size (E : S, the ratio of embryo to seed) is a key trait related to germination ecology and seed plant evolution. A small, underdeveloped embryo is a primitive feature of angiosperms, which has led to the hypothesis that an evolutionary trend towards increasing E : S has occurred. Here, I examine first the tempo and mode of E : S evolution in angiosperms; then I test for phylogenetic associations of E : S with traits hypothetically related to anagenetic (germination time) and cladogenetic (number of species per family and differential speciation) change, and finally I test the existence of a directional increasing trend in E : S. The analysis of the evolutionary tempo suggests that E : S changed very fast early in evolutionary time and remained stable later, which is consistent with early radiations and fits well with the history of angiosperms consisting of rapid spread associated with great diversification rates soon after their origin. E : S evolution in angiosperms has not followed a punctuational mode of evolution but a scaled-gradualism evolution in which stasis has occurred in longer branches of the phylogeny. An evolutionary trend towards increasing E : S has not been actively driven by anagenesis nor cladogenesis, although large E : S is associated with high levels of diversification (i.e. number of species per family). This rapid ecological diversification occurring in the early radiation probably produced an increasing phenotypic variance in the E : S. Because the ancestral embryo was so small, an increase in variance might have produced a passive trend towards the only direction allowed for the ancestral embryo to evolve. Thus, a passive diffusion away from a lower bound may explain the average increase in E : S.     

Yuhania: a unique angiosperm from the Middle Jurassic of Inner Mongolia,China

Despite increasing claims of pre-Cretaceous angiosperms, whether there really are angiosperms in the Jurassic is apparently still an open question for many people before further evidence is available. This question can only be answered by studying more Jurassic plant fossils. Here we report a fossil angiosperm, Yuhania daohugouensis gen. et sp. nov, from the Middle Jurassic of Inner Mongolia, China. The plant includes connected stem, leaves, flowers, aggregate fruits, fruitlets, and seeds within fruitlets. The leaves are helically arranged along the curving stem, linear in shape, with 5–6 parallel veins. The aggregate fruit is pedicellate, composed of over 20 carpels/fruitlets helically arranged. Each fruitlet encloses a seed. The reproductive organs in various stages are found in the same plant, allowing us to understand the development of Yuhania. The occurrence of Yuhania in the Middle Jurassic re-confirms the Jurassic history for angiosperms that has been suggested by other independent research and adds to the on-going study on the early evolution of angiosperms.     

The age of the angiosperms: a molecular timescale without a clock

The age of the angiosperms has long been of interest to botanists and evolutionary biologists. Many early efforts to date the age of the angiosperms and evolutionary divergences within the angiosperm clade using a molecular clock have yielded age estimates that are grossly inconsistent with the fossil record. We investigated the age of angiosperms using Bayesian relaxed clock (BRC) and penalized likelihood (PL) approaches. Both of these methods allow the incorporation of multiple fossil constraints into the optimization procedure. The BRC method allows a range of values for among-lineage rate of substitution, from a nearly clocklike behavior to a condition in which each branch is allowed an optimal substitution rate, and also accounts for variation in molecular evolution across multiple genes. A topology derived from an analysis of genes from all three plant genomes for 71 taxa was used as a backbone. The effects on age estimates of different genes, single-gene versus concatenated datasets, and the inclusion and assumptions of fossils as age constraints were examined. In addition, the influence of prior distributions on estimates of divergence times was also explored. These results indicate that widely divergent age estimates can result from the different methods (198-139 million years ago), different sources of data (275-122 million years ago), and the inclusion of temporal constraints to topologies. Most dates, however, are between 180-140 million years ago, suggesting a Middle Jurassic-Early Cretaceous origin of flowering plants, predating the oldest unequivocal fossil angiosperms by about 45-5 million years. Nonetheless, these dates are consistent with other recent studies that have used methods that relax the assumption of a strict molecular clock and also agree with the hypothesis that the angiosperms may be somewhat older than the fossil record indicates.     

The oldest fossil evidence of animal parasitism by fungi supports a Cretaceous diversification of fungal-arthropod symbioses

Paleoophiocordyceps coccophagus, a fungal parasite of a scale insect from the Early Cretaceous (Upper Albian), is reported and described here. This fossil not only provides the oldest fossil evidence of animal parasitism by fungi but also contains morphological features similar to asexual states of Hirsutella and Hymenostilbe of the extant genus Ophiocordyceps (Ophiocordycipitaceae, Hypocreales, Sordariomycetes, Pezizomycotina, Ascomycota). Because species of Hypocreales collectively exhibit a broad range of nutritional modes and symbioses involving plants, animals and other fungi, we conducted ancestral host reconstruction coupled with phylogenetic dating analyses calibrated with P.coccophagus. These results support a plant-based ancestral nutritional mode for Hypocreales, which then diversified ecologically through a dynamic process of intra- and interkingdom host shifts involving fungal, higher plant and animal hosts. This is especially evident in the families Cordycipitaceae, Clavicipitaceae and Ophiocordycipitaceae, which are characterized by a high occurrence of insect pathogens. The ancestral ecologies of Clavicipitaceae and Ophiocordycipitaceae are inferred to be animal pathogens, a trait inherited from a common ancestor, whereas the ancestral host affiliation of Cordycipitaceae was not resolved. Phylogenetic dating supports both a Jurassic origin of fungal-animal symbioses within Hypocreales and parallel diversification of all three insect pathogenic families during the Cretaceous, concurrent with the diversification of insects and angiosperms.     

Evolution of seed storage protein genes: Legumin genes of Ginkgo biloba

Legumin-like seed storage proteins have been intensively studied in crop plants. However, little is known about the molecular evolution of these proteins and their genes and it was assumed that they originated from an ancestral gene that already existed at the beginning of angiosperm evolution. We have evidence for the ubiquitous occurrence of homologous proteins in gymnosperms as well. We have characterized the major seed storage globulin from Ginkgo biloba by amino acid sequencing, which reveals clear homology to legumin-like proteins from angiosperms. The Ginkgo legumin is encoded by a gene family; we describe two of its members. The promoter regions contain sequence motifs which are known to function as regulatory elements involved in seed-specific expression of angiosperm legumins, although the tissues concerned are different in gymnosperms and angiosperms. The Ginkgo legumin gene structure is divergent from that of angiosperms and suggests that the evolution of legumin genes implicated loss of introns. From our data and from functional approaches recently described it becomes obvious that the posttranslational processing site of legumin precursors is less conserved than hitherto assumed. Finally, we present a phylogenetic analysis of legumin encoding sequences and discuss their utility as molecular markers for the reconstruction of seed plant evolution.Correspondence to: K.-P. Häger     

Cretaceous diversification of angiosperms in the western part of the Iberian Peninsula

The classic leaf fossil floras from the Cretaceous of the Lusitanian Basin, Portugal, which were first described more than one hundred years ago, have played an important role in the development of ideas on the early evolution of angiosperms. Insights into the nature of vegetational change in the Lusitanian Basin through the Cretaceous have also come from studies of fossil pollen and spores, but the discovery of a series of mesofossil floras containing well-preserved angiosperm reproductive structures has provided a new basis for understanding the systematic relationships and biology of angiosperms at several stratigraphic levels through the Cretaceous. In the earliest mesofossil floras from the Torres Vedras locality, which are of probable Late Barremian-Early Aptian age, angiosperms are surprisingly diverse with about 50 different taxa. In slightly later mesofossil floras, which are of probable Late Aptian-Early Albian age, the diversity of angiosperms is still more substantial with more than hundred different kinds of angiosperm reproductive structures recognized from the Famalicão locality alone. However, this early diversity is largely among angiosperm lineages that produced monoaperturate pollen (e.g., Chloranthaceae, Nymphaeales) and early diverging monocots (Alismatales). Eudicots are rare in these Early Cretaceous mesofossil floras, but already by the Late Cenomanian the vegetation of the western Iberian Peninsula is dominated by angiosperms belonging to various groups of core eudicots. The Normapolles complex is a particularly conspicuous element in both mesofossil floras and in palynological assemblages. In the Late Cretaceous mesofossil floras from Esgueira and Mira, which are of Campanian-Maastrichtian age, core eudicots are also floristically dominant and flowers show great organisational similarity to fossil flowers from other Late Cretaceous floras described from other localities in Asia, Europe and North America.     

On the laterocytic stomatotype in angiosperms

The laterocytic type of stomatal apparatus in angiosperms is considered. Investigation of the stomatal apparatus of 18 species of Hamamelidaceae, representing 15 genera, showed that in addition to the anomocytic, paracytic, and encyclocytic stomatotypes previously known in the family, the laterocytic type is found in several genera (Dicoryphe, Exbucklandia, and others). Study of 15 species of Chloranthaceae, representing all five genera, showed that laterocytic stomates occur inChloranthus andSarcandra and sometimesHedyosmum, along with stomates of other types.Barbeya oleoides (Barbeyaceae) and the four investigated species ofBalanops (Balanopaceae) have exclusively (or inB. oliviformis mainly) laterocytic stomates. Laterocytic stomates are present also inKadsura andSchisandra of the Schisandraceae, along with the previously known paracytic type. In addition to the foregoing genera, laterocytic stomates are known in some members of the Buxaceae, Celastraceae, Crypteroniaceae, Hydrangeaceae, Icacinaceae Platanaceae, Tetracentraceae and Trochodendraceae.     

Evolution of the bHLH Genes Involved in Stomatal Development: Implications for the Expansion of Developmental Complexity of Stomata in Land Plants

Stomata play significant roles in plant evolution. A trio of closely related basic Helix-Loop-Helix (bHLH) subgroup Ia genes, SPCH, MUTE and FAMA, mediate sequential steps of stomatal development, and their functions may be conserved in land plants. However, the evolutionary history of the putative SPCH/MUTE/FAMA genes is still greatly controversial, especially the phylogenetic positions of the bHLH Ia members from basal land plants. To better understand the evolutionary pattern and functional diversity of the bHLH genes involved in stomatal development, we made a comprehensive evolutionary analysis of the homologous genes from 54 species representing the major lineages of green plants. The phylogenetic analysis indicated: (1) All bHLH Ia genes from the two basal land plants Physcomitrella and Selaginella were closely related to the FAMA genes of seed plants; and (2) the gymnosperm ‘SPCH’ genes were sister to a clade comprising the angiosperm SPCH and MUTE genes, while the FAMA genes of gymnosperms and angiosperms had a sister relationship. The revealed phylogenetic relationships are also supported by the distribution of gene structures and previous functional studies. Therefore, we deduce that the function of FAMA might be ancestral in the bHLH Ia subgroup. In addition, the gymnosperm “SPCH” genes may represent an ancestral state and have a dual function of SPCH and MUTE, two genes that could have originated from a duplication event in the common ancestor of angiosperms. Moreover, in angiosperms, SPCHs have experienced more duplications and harbor more copies than MUTEs and FAMAs, which, together with variation of the stomatal development in the entry division, implies that SPCH might have contributed greatly to the diversity of stomatal development. Based on the above, we proposed a model for the correlation between the evolution of stomatal development and the genes involved in this developmental process in land plants.     

The origin of angiosperms

The claim of monophyletic origin of angiosperms arose from the confusion of phylogenetic and taxonomic concepts. Unpreconceived studies of extant angiosperms point to more than one archetype. Several lines of angiosperms have simultaneously entered the fossil record; the monocotyledons, proto-Hamamelidales, proto-Laurales and “proteophylls” (possibly ancestral to the Rosidae) are recognized among them. Three groups of Mesozoic seed plants — the Caytoniales, Czekanowskiales and Dirhopalostachyaceae — are distinguished as major sources of angiosperm characters (proangiosperms). Other Mesozoic lineages probably also contributed to the angiosperm character pool. Angiospermization is related to Mammalization and other processes involved in development of the Cenozoic lithosphere and biosphere.