Importance of scale,land‐use,and stream network properties for riparian plant communities along an urban gradient

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Spatial scale of observation affects α, β and γ diversity of cavity-nesting bees and wasps across a tropical land-use gradient

Aim Anthropogenic changes in land use may have major consequences for global biodiversity. However, species diversity is determined by a suite of factors that may affect species differently at different spatial scales. We tested the combined effects of land use and spatial scale on α, β and γ diversity in the tropics using experimental communities of cavity‐nesting bees and waSPS (Hymenoptera: Aculeata). We aimed to determine whether: (1) land‐use intensity negatively affects species richness of cavity‐nesting Hymenoptera, (2) β diversity, both within and between plots, is higher in more natural systems, (3) species richness of flowering herbs correlates positively with species richness of Hymenoptera within and across habitats, (4) richness of cavity‐nesting Hymenoptera in highly modified habitats declines with increasing distance from natural or semi‐natural habitats, (5) the effects of land use, herb diversity and forest distance on Hymenoptera α and β diversity vary at different spatial scales, and (6) bees and waSPS respond to land use in a similar way. Location Manabi, south‐west Ecuador. Methods We examined diversity (species richness) within 48 plots of five habitat types that comprised a gradient of decreasing agricultural intensity from rice and pasture to coffee agroforests, unmanaged abandoned agroforests and forest fragments, using standardized nesting resources for reproducing communities of cavity‐nesting bees and waSPS. Results (1) Land use significantly affected α diversity of trap‐nesting bees and waSPS at the subplot (per trap) scale, but not subplot β diversity or plot‐scale species richness (γ diversity). (2) Beta diversity was surprisingly higher between plots within a land‐use type than between land‐use types. (3) Species richness of bees and waSPS increased with diversity of flowering herbs at the subplot (trap) scale only. (4) Forest distance correlated positively with bee species richness at the plot scale only. (5) Land use, herb diversity and forest distance each showed significant correlations with bee and wasp diversity at only one spatial scale. (6) Despite differences in life history, bees and waSPS responded to land‐use intensity in a similar way. Main conclusions The effects of land use on species richness were highly dependent on spatial scale. Subplot‐scale analyses showed that rice and pasture contained the highest species diversity, whereas plot‐scale analyses showed no significant difference in the diversity of different land‐use types. We emphasize caution in the estimation of biodiversity at only one spatial scale, and highlight the surprisingly large contribution of managed land to the regional biodiversity of these species.     

Across species‐pool aggregation alters grassland productivity and diversity

Plant performance is determined by the balance of intra‐ and interspecific neighbors within an individual's zone of influence. If individuals interact over smaller scales than the scales at which communities are measured, then altering neighborhood interactions may fundamentally affect community responses. These interactions can be altered by changing the number (species richness), abundances (species evenness), and positions (species pattern) of the resident plant species, and we aimed to test whether aggregating species at planting would alter effects of species richness and evenness on biomass production at a common scale of observation in grasslands. We varied plant species richness (2, 4, or 8 species and monocultures), evenness (0.64, 0.8, or 1.0), and pattern (planted randomly or aggregated in groups of four individuals) within 1 × 1 m plots established with transplants from a pool of 16 tallgrass prairie species and assessed plot‐scale biomass production and diversity over the first three growing seasons. As expected, more species‐rich plots produced more biomass by the end of the third growing season, an effect associated with a shift from selection to complementarity effects over time. Aggregating conspecifics at a 0.25‐m scale marginally reduced biomass production across all treatments and increased diversity in the most even plots, but did not alter biodiversity effects or richness–productivity relationships. Results support the hypothesis that fine‐scale species aggregation affects diversity by promoting species coexistence in this system. However, results indicate that inherent changes in species neighborhood relationships along grassland diversity gradients may only minimally affect community (meter) – scale responses among similarly designed biodiversity–ecosystem function studies. Given that species varied in their responses to local aggregation, it may be possible to use such species‐specific results to spatially design larger‐scale grassland communities to achieve desired diversity and productivity responses.     

Effects of road age and distance on plant biodiversity: a case study in the Yellow River Delta of China

A majority of ecological studies of roads have usually focused on their deleterious effect, and these preconceptions have hampered a full evaluation of ecological functions of roads. We examined the effect of road disturbance on plant communities by investigating roadside vegetation in the protogenic road ecosystem of the Yellow River Delta (YRD), China. Specifically, we examined the effect of distance from the road verge and road age on the pattern of plant species richness, diversity, and composition at 17 sites. The results revealed that roads retained higher species richness adjacent to the road verge than far away from the road verge (>200 m). Additionally, species richness and diversity of roadside plants significantly decreased as the distance from the road verge increased. Plant species richness and diversity increased with road age in majority of prescribed distances, while species richness at the road verge significantly increased with road age and peaked at a road age of 20 years, after which species richness plateaued. A correspondence analysis illuminated that the roadside vegetation primarily consists of non-halophytic native species. The percentage of halophytes increased with the distance from the road verge and decreased with road age. Additionally, different performances of alien and native species in response to road disturbance were observed. Furthermore, it is worth noting that roadside environments provide survival habitats for some threatened species, such as wild soybean. In the present study, both positive and negative effects of roads on the plant community were observed from road construction to the long-term operational phases.     

Broad‐scale patterns in plant diversity vary between land uses in a variegated temperate Australian agricultural landscape

Plant diversity is threatened in many agricultural landscapes. Our understanding of patterns of plant diversity in these landscapes is mainly based on small‐scale (<1000 m²) observations of species richness. However, such observations are insufficient for detecting the spatial heterogeneity of vegetation composition. In a case‐study farm on the North‐West Slopes of New South Wales, Australia, we observed species richness at four scales (quadrat, patch, land use and landscape) across five land uses (grazed and ungrazed woodlands, native pastures, roadsides and crops). We applied two landscape ecological models to assess the contribution of these land uses to landscape species richness: (i) additive partitioning of diversity at multiple spatial scales, and (ii) a measure of habitat specificity – the effective number of species that a patch contributes to landscape species richness. Native pastures had less variation between patches than grazed and ungrazed woodlands, and hence were less species‐rich at the landscape scale, despite having similar richness to woodlands at the quadrat and patch scale. Habitat specificity was significantly higher for ungrazed woodland patches than all other land uses. Our results showed that in this landscape, ungrazed woodland patches had a higher contribution than the grazed land uses to landscape species richness. These results have implications for the conservation management of this landscape, and highlighted the need for greater consensus on the influence of different land uses on landscape patterns of plant diversity.     

Does host‐plant diversity explain species richness in insects? A test using Coccidae (Hemiptera)

1. The megadiverse herbivores and their host plants are a major component of biodiversity, and their interactions have been hypothesised to drive the diversification of both. 2. If plant diversity influences the diversity of insects, there is an expectation that insect species richness will be strongly correlated with host‐plant species richness. This should be observable at two levels (i) more diverse host‐plant groups should harbour more species of insects, and (ii) the species richness of a group of insects should correlate with the richness of the host groups it uses. However, such a correlation is also consistent with a hypothesis of random host use, in which insects encounter and use hosts in proportion to the diversity of host plants. Neither of these expectations has been widely tested. 3. These expectations were tested using data from a species‐rich group of insects – the Coccidae (Hemiptera). 4. Significant positive correlations were found between the species richness of coccid clades (genera) and the species richness of the host‐plant family or families upon which the clades occur. On a global scale, more closely related plant families have more similar communities of coccid genera but the correlation is weak. 5. Random host use could not be rejected for many coccids but randomisation tests and similarity of coccid communities on closely related plant families show that there is non‐random host use in some taxa. Overall, our results support the idea that plant diversity is a driver of species richness of herbivorous insects, probably via escape‐and‐radiate or oscillation‐type processes.     

Response of riparian plant communities to distance from surface water in the Okavango Delta,Botswana

The objective of this study was to determine the influence of distance from surface water on riparian woodland communities in the Okavango Delta. Vegetation sampling was conducted in seven sites within the Okavango Delta in 20 m × 10 m belted plots placed perpendicular to the river bank. The plots were placed at 0–10 m, 10–20 m, 20–30 m, 30–40 m and 40–50 m distance classes increasing away from the river bank. Tree height, basal area, species richness, canopy cover and diversity were determined for each distance class. Indicator species analysis was used to determine the characteristic species at each distance class. Single‐factor ANOVA and Tukey post hoc analysis were used to compare species diversity, mean tree height, cover and basal area between distance classes. Correlation between distance from surface water and vegetation parameters was sought using Spearman regression analysis. All parameters except for species richness varied significantly (P < 0.05) along distance from surface water. Distance from surface water was positively correlated all vegetation parameters except for mean species richness/plot. These results show that distance from surface water influences riparian plant community composition and distribution in the Okavango Delta. This implies that riparian plant species can be indicators of long‐term hydrologic conditions in the Delta.     

Elephants of south‐east Angola in war and peace: their decline,re‐colonization and recent status

Angola’s intermittent 27‐year civil war displaced over four million people and decimated wildlife populations. During the 1980s, African elephants (Loxodonta africana Blumenbach) in Angola drew international alarm with reports of 100,000 elephants killed. Luiana Partial Reserve (PR), a conservation area in south‐east Angola, was the military operations centre for UNITA (National Union for the Total Independence of Angola), which used elephant ivory to pay for arms and meat. However, the full impact of the civil war on elephants is uncertain because there are no reliable estimates of Angolan elephant populations. Following the end of the civil war in 2002, our three aerial surveys of Luiana PR indicated that elephant numbers are increasing rapidly, from 366 in January 2004 to 1827 in November 2005, and expanding their range in the Reserve. Concurrently, elephants tagged with satellite collars in northern Botswana and the Caprivi Strip, Namibia, moved into Luiana PR. To facilitate re‐colonization and conservation of elephants and other wildlife in Luiana PR, we recommend: (i) realignment of the veterinary fence on the Botswana–Namibia border; (ii) development of effective land use management and anti‐poaching programmes; (iii) clearing of landmines; (iv) designation of the Reserve a national park; and (v) development of ecotourism and community conservation programmes.     

Synergistic and antagonistic interactions of future land use and climate change on river fish assemblages

River ecosystems are threatened by future changes in land use and climatic conditions. However, little is known of the influence of interactions of these two dominant global drivers of change on ecosystems. Does the interaction amplify (synergistic interaction) or buffer (antagonistic interaction) the impacts and does their interaction effect differ in magnitude, direction and spatial extent compared to single independent pressures. In this study, we model the impact of single and interacting effects of land use and climate change on the spatial distribution of 33 fish species in the Elbe River. The varying effects were modeled using step‐wise boosted regression trees based on 250 m raster grid cells. Species‐specific models were built for both ‘moderate’ and ‘extreme’ future land use and climate change scenarios to assess synergistic, additive and antagonistic interaction effects on species losses, species gains and diversity indices and to quantify their spatial distribution within the Elbe River network. Our results revealed species richness is predicted to increase by 0.7–2.9 species by 2050 across the entire river network. Changes in species richness are likely to be spatially variable with significant changes predicted for 56–85% of the river network. Antagonistic interactions would dominate species losses and gains in up to 75% of the river network. In contrast, synergistic and additive effects would occur in only 20% and 16% of the river network, respectively. The magnitude of the interaction was negatively correlated with the magnitudes of the single independent effects of land use and climate change. Evidence is provided to show that future land use and climate change effects are highly interactive resulting in species range shifts that would be spatially variable in size and characteristic. These findings emphasize the importance of adaptive river management and the design of spatially connected conservation areas to compensate for these high species turnovers and range shifts.     

Riverine networks constrain β‐diversity patterns among fish assemblages in a large Neotropical river

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Natives and non‐natives plants show different responses to elevation and disturbance on the tropical high Andes of Ecuador

The aim was to assess patterns of plant diversity in response to elevation and disturbance in a tropical mountain. The study area was located in north‐central portion of the Eastern Cordillera of the Ecuadorian Andes, on a road from 1,150 m a.s.l. (Osayacu) to 4,000 (Papallacta). Along a mountain road spanning a wide altitudinal gradient, at 20 elevations we sampled three plots: one at the roadside and two perpendicular to the roadside. The relationship between elevation and species richness was assessed using linear and quadratic regressions, the effect of disturbance on species richness was determined by ANCOVA and a t test with parameters obtained from quadratic equations. Similarity of species composition among the roadside and sites distant was evaluated with the Chao‐Jaccard and classic Jaccard similarity indices, the distribution of non‐native species according to their origin were analyzed with linear and quadratic regression. The native species showed a linearly monotonic decrease with elevation, whereas non‐natives showed a quadratic distribution. Disturbed areas had the greatest number of non‐native species and lower native species richness, showing also a high floristic similarity; less disturbed areas showed the opposite. The non‐native species of temperate origin were more numerous and showed unimodal elevational distribution, while species of tropical origin were few and decreased linearly with elevation. We conclude that in a tropical highland mountain range, native and non‐native plant species respond differently to elevation: native species exhibit a monotonically linear decrease, and non‐native species show a unimodal trend. Disturbance positively affects non‐native species showing higher richness and fewer species turnover. In addition, the non‐native species are located along of the elevational gradient in relation to their biogeographic origin.     

Habitat predictors of genetic diversity for two sympatric wetland‐breeding amphibian species

Population genetic diversity is widely accepted as important to the conservation and management of wildlife. However, habitat features may differentially affect evolutionary processes that facilitate population genetic diversity among sympatric species. We measured genetic diversity for two pond‐breeding amphibian species (Dwarf salamanders, Eurycea quadridigitata; and Southern Leopard frogs, Lithobates sphenocephalus) to understand how habitat characteristics and spatial scale affect genetic diversity across a landscape. Samples were collected from wetlands on a longleaf pine reserve in Georgia. We genotyped microsatellite loci for both species to assess population structures and determine which habitat features were most closely associated with observed heterozygosity and rarefied allelic richness. Both species exhibited significant population genetic structure; however, structure in Southern Leopard frogs was driven primarily by one outlier site. Dwarf salamander allelic richness was greater at sites with less surrounding road area within 0.5 km and more wetland area within 1.0 and 2.5 km, and heterozygosity was greater at sites with more wetland area within 0.5 km. In contrast, neither measure of Southern Leopard frog genetic diversity was associated with any habitat features at any scale we evaluated. Genetic diversity in the Dwarf salamander was strongly associated with land cover variables up to 2.5 km away from breeding wetlands, and/or results suggest that minimizing roads in wetland buffers may be beneficial to the maintenance of population genetic diversity. This study suggests that patterns of genetic differentiation and genetic diversity have associations with different habitat features across different spatial scales for two syntopic pond‐breeding amphibian species.     

Landscape‐level tree cover predicts species richness of large‐bodied frugivorous birds in forest fragments

Large‐bodied frugivorous birds play an important role in dispersing large‐sized seeds in Neotropical rain forests, thereby maintaining tree species richness and diversity. Conversion of contiguous forest land to forest fragments is thought to be driving population declines in large‐bodied frugivores, but the mechanistic drivers of this decline remain poorly understood. To assess the importance of fragment‐level versus local landscape attributes in influencing the species richness of large‐bodied (>100 g) frugivorous birds, we surveyed 15 focal species in 22 forest fragments (2.7 to 33.6 ha, avg. = 16.0 ha) in northwest Ecuador in 2014. Fragment habitat variables included density of large trees, canopy openness and height, and fragment size; landscape variables included elevation and the proportion of tree cover within a 1 km radius of each fragment. At both the individual species level, and across the community of 12 species of avian frugivore we detected, there was higher richness and probability of presence in fragments with more tree cover on surrounding land. This tendency was particularly pronounced among some endangered species. These findings corroborate the idea that partially forested land surrounding fragments may effectively increase the suitable habitat for forest‐dwelling frugivorous birds in fragmented landscapes. These results can help guide conservation priorities within fragmented landscapes, with particular reference to retaining trees and reforesting to attain high levels of tree cover in areas between forest patches.     

Contrasting effects of land‐use changes on herbivory and pollination networks

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Multi‐scale responses of plant species diversity in semi‐natural buffer strips to agricultural landscapes

Question: How does agricultural land usage affect plant species diversity in semi‐natural buffer strips at multiple scales? Location: Lepsämä River watershed, Nurmijärvi, Southern Finland. Methods: Species diversity indicators included both richness and evenness. Plant communities in buffer strips were surveyed in 29 sampling sites. Using ArcGIS Desktop 9.0 (ArcInfo) and Fragstats 3.3 for GIS analysis, the landscape composition around each sampling site was characterized by seven parameters in square sectors at five scales: 4, 36, 100, 196, and 324ha. For each scale, Principle Component Analysis was used to examine the importance of each structural metric to diversity indicators using multiple regression and other simple analyses. Results: For all but the smallest scales (4 ha), two structural metrics including the diversity of land cover types and percentage of arable land were positively and negatively correlated with species richness, respectively. Both metrics had the highest correlation coefficients for species richness at the second largest scale (196 ha). The density of arable field edges between the fields was the only metric that correlated with species evenness for all scales, which had highest predictive power at the second smallest scale (36 ha). Conclusions: Species richness and evenness of buffer strips had scale‐dependent relationships to land use in agricultural ecosystems. The results of this study indicated that species richness depends on the pattern of arable land use at large scales, which may relate to the regional species pool. Meanwhile, species evenness depended on the level of field edge density at small scales, which relates to how the nearby farmland was divided by the edges (e.g. many small‐scale fields with high edge density or a few big‐scale fields with low edge density). This implies that it is important to manage the biodiversity of buffer strips within a landscape context at multiple scales.     

Land use is a determinant of plant pathogen alpha‐ but not beta‐diversity

Little is known about the diversity patterns of plant pathogens and how they change with land use at a broad scale. We employed DNA metabarcoding to describe the diversity and composition of putative plant pathogen communities in three substrates (soil, roots, and leaves) across five major land uses at a national scale. Almost all plant pathogen communities (fungi, oomycetes, and bacteria) showed strong responses to land use and substrate type. Land use category could explain up to 24% of the variance in composition between communities. Alpha‐diversity (richness) of plant pathogens was consistently lower in natural forests than in agricultural systems. In planted forests, there was also generally low pathogen alpha‐diversity in soil and roots, but alpha‐diversity in leaves was high compared with most other land uses. In contrast to alpha‐diversity, differences in within‐land use beta‐diversity of plant pathogens (the predictability of plant pathogen communities within land use) were subtle. Our results show that large‐scale patterns and distributions of putative plant pathogens can be determined using metabarcoding, allowing some of the first landscape level insights into these critically important communities.     

Woody Species Alpha‐diversity and Species Abundance Distributions in an African Semi‐deciduous Tropical Rain Forest

Understanding plant species diversity patterns and distributions is critical for conserving and sustainably managing tropical rain forests of high conservation value. We analyzed the alpha‐diversity, species abundance distributions, and relative ecological importance of woody species in the Budongo Forest, a remnant forest of the Albertine Rift in Uganda. In 32 0.5‐ha plots, we recorded 269 species in 171 genera and 51 families with stems of ≥2.0 cm in diameter at breast height (dbh). There were 53 more species with stems of ≥2.0 cm dbh than with stems of ≥10 cm dbh, of which 33 were treelets and 20 were multi‐stemmed shrubs. For both minimum stem diameter cut‐offs (i.e., ≥2 cm dbh vs. ≥10 cm dbh), the Fabaceae, Euphorbiaceae, Ulmaceae, and Meliaceae families and the species Cynometra alexandri, Lasiodiscus mildbraedii, and Celtis mildbraedii had the highest relative ecological importance. The relative ecological importance of some species and families changed greatly with the minimum stem diameter measured. Alpha‐diversity, species richness, and species abundance distributions varied across historical management practice types, forest community types, and as a function of minimum stem diameter. Species richness and Shannon–Weiner diversity index were greater for species with stems of ≥2.0 cm dbh than of ≥10 cm dbh. The decrease in species evenness with an increasing number of plots was accompanied by an increase in species richness for trees of both minimum diameters. This forest is characterized by a small number of abundant species and a relatively large proportion of infrequent species, many of which are sparsely distributed and with restricted habitats. We recommend lowering the minimum stem diameter measured for woody species diversity studies in tropical forests from 10 cm dbh to 2 cm dbh to include a larger proportion of the species pool.     

Conventional land‐use intensification reduces species richness and increases production: A global meta‐analysis

Most current research on land‐use intensification addresses its potential to either threaten biodiversity or to boost agricultural production. However, little is known about the simultaneous effects of intensification on biodiversity and yield. To determine the responses of species richness and yield to conventional intensification, we conducted a global meta‐analysis synthesizing 115 studies which collected data for both variables at the same locations. We extracted 449 cases that cover a variety of areas used for agricultural (crops, fodder) and silvicultural (wood) production. We found that, across all production systems and species groups, conventional intensification is successful in increasing yield (grand mean + 20.3%), but it also results in a loss of species richness (?8.9%). However, analysis of sub‐groups revealed inconsistent results. For example, small intensification steps within low intensity systems did not affect yield or species richness. Within high‐intensity systems species losses were non‐significant but yield gains were substantial (+15.2%). Conventional intensification within medium intensity systems revealed the highest yield increase (+84.9%) and showed the largest loss in species richness (?22.9%). Production systems differed in their magnitude of richness response, with insignificant changes in silvicultural systems and substantial losses in crop systems (?21.2%). In addition, this meta‐analysis identifies a lack of studies that collect robust biodiversity (i.e. beyond species richness) and yield data at the same sites and that provide quantitative information on land‐use intensity. Our findings suggest that, in many cases, conventional land‐use intensification drives a trade‐off between species richness and production. However, species richness losses were often not significantly different from zero, suggesting even conventional intensification can result in yield increases without coming at the expense of biodiversity loss. These results should guide future research to close existing research gaps and to understand the circumstances required to achieve such win‐win or win‐no‐harm situations in conventional agriculture.     

Pollen dispersal and genetic variation in an early‐successional forest herb in a peri‐urban forest

In order to conserve forest plant species under the particularly high constraints that represent urban surroundings, it is necessary to identify the key factors for population persistence. This study examined within‐ and between‐population pollen dispersal using fluorescent dye as pollen analogue, and genetic variation and structure using 15 allozyme loci in Centaurium erythraea, an insect‐pollinated, early‐successional forest biennial herb occurring in a peri‐urban forest (Brussels urban zone, Belgium). Dye dispersal showed an exponential decay distribution, with most dye transfers occurring at short distances (<15 m), and only a few long‐distance events (up to 743 m). Flowers of C. erythraea are mainly visited by Syrphids (Diptera) and small bees, which are usually considered as short‐distance pollen dispersers, and occasionally by bumblebees, which are usually longer‐distance pollen dispersers. Small and large dye source populations differed in dye deposition patterns. The populations showed low genetic diversity, high inbreeding coefficients (F_IS) and high genetic differentiation (F_ST), suggesting restricted gene flow, which can be expected for an early‐successional biennial species with a predominantly selfing breeding system and fluctuating population sizes. The positive relationship between recruitment rate and allelic richness and expected heterozygosity, and the absence of significant correlations between genetic variation and population size suggest seedling recruitment from the seed bank, contributing to maintain genetic diversity. Long‐distance dye dispersal events indicate pollinator movements along urban forest path and road verges. These landscape elements might therefore have a potential conservation value by contributing to connectivity of early‐successional species populations located in patchy open habitats.