Association between cacti and nurse perennials in a heterogeneous tropical dry forest in northwestern Mexico

Abstract. The Sierra de La Laguna, Baja California Sur harbors the only tropical dry forest of the Peninsula. An inventory of the perennial plants was carried out at the eastern part of this mountain range. Plant spatial distribution was analyzed considering the species composition and vertical stratification of plant clusters in a study plot of 2 500 m². A plant cluster was defined as a group of at least three individuals with a maximum distance between plants of 1 m. Soil physical-chemical characteristics and soil surface temperatures were compared between shade and sun conditions. The tropical dry forest of Baja California Sur presents a highly aggregated pattern of species distribution. Most of the perennial plants grow clumped, yet not all of the six cactus species recorded were significantly associated with them. Pattern analysis revealed that only Stenocereus thurberii and Ferocactus peninsulae were aggregated and associated to perennial plants. There is no replacement pattern between cacti and perennial plants. Nutrient content, including soil fertility, between shade and sun conditions does not seem to explain the patchy distribution of perennial plants, while the differences in solar radiation between these conditions appear to be restrictive and determinant of this spatial pattern of distribution.     

Dry vegetation in relation to the physical environment in the Baja California Peninsula,Mexico

Abstract. An ordination analysis of vegetation and flora of Los Cabos Region, Baja California Peninsula, Mexico and its relationships with their environment and geomorphic characteristics was studied at 38 sites, selected based on ecoregion mapping units (EMU) previously delineated for the study area. Multivariate methods were used to analyse the relationship between physical characteristics of the environment and the two primary vegetation types, the Dry tropical forest (DTF) and the Xerophilous scrubland (XS), which together represent 83% of the vegetation cover in the study area. Sites were grouped based on both physical characteristics and relative abundance of plant species. The results of the statistical analysis suggest that altitude, rainfall, temperature, and lithology can help explaining differences between these important vegetation types. In the case of XS, the morpho‐physiognomic characteristics of vegetation in each site discriminated between two scrub types.     

Cyanobacterial Microbiotic Crusts in Eroded Soils of a Tropical Dry Forest in the Baja California Peninsula,Mexico

This study deals with the cyanobacterial composition, and the nitrogen fixation of four members, of cryptobiotic crusts collected from eroded soils in a transitional area between arid and tropical climatic environments. Identification was based on microscopic analyses. Morphotypes were identified directly from reactivated natural crusts and from cultured strains. The identified morphotypes were Scytonema cf. ocellatum, Scytonema sp., Microcoleus cf. paludosus, M. cf. sociatus, Calothrix cf. elenkinii, C. cf. marchica, Nostoc cf. microscopicum, and Phormidium sp. Results show that the cyanobacterial composition of the microbiotic crusts studied is different from those in warmer and cooler deserts, particularly the absence of Microcoleus cf. vaginatus and Nostoc cf. commune in our samples. Such differences could be caused by the transitional character of the area. The results of the acetylene reduction assay show that the capacity of nitrogen fixation of some morphotypes is limited to the heterocyst-forming morphotypes.     

Heavy Metal Accumulation in Four Species of Sea Turtles from the Baja California Peninsula, Mexico

Heavy metals were assessed in four species of sea turtles from the Baja California Peninsula, Mexico, representing the first report of heavy metal concentrations in tissues of post-yearling sea turtles from the Eastern Pacific. Concentrations of Cd measured in C. mydas kidney (653 μg/g dry wt) were the highest ever reported for any sea turtle species. Cd accumulated preferentially in kidney and the ratios of kidney to liver Cd in Baja California turtles were among the highest reported for sea turtles globally. Zn, Ni, and Mn concentrations were also significantly higher in kidney than other tissues, while Cu and Fe were greatest in liver, and all metals were lowest in muscle. With the exception of one value (69.9 μg/g in kidney of C. caretta), Pb was low in all tissues from Baja California. In comparisons across species, kidney of C. mydas had greater Zn and Ni concentrations as compared to other species, although there was no difference in liver metal levels among the species. Positive correlations were detected in the concentrations of Cd, Cu and Ni with the straight carapace length of C. caretta.     

Regionalization of the avifauna of the Baja California Peninsula, Mexico: a parsimony analysis of endemicity and distributional modelling approach

Aim To analyse the distributional patterns of the Baja California Peninsula's resident avifauna, and to generate a regionalization based on a method that uses a parsimony analysis (parsimony analysis of endemicity, PAE) of point data and modelled potential distributions. Location The Baja California Peninsula, Mexico. Methods A data base was constructed containing records of 113 species of resident terrestrial birds present in the Baja California Peninsula. Records and localities were obtained from the literature and from specimens housed in scientific collections world‐wide. Raw data points and potential distribution maps obtained using the software Genetic Algorithms for Rule‐set Prediction (GARP), were analysed with PAE. Results The data base consisted of 4164 unique records (only one combination of species/locality) belonging to 113 terrestrial resident bird species, in a total of 809 localities. From the point distribution matrix, the analysis generated 500 equally parsimonious trees, from which a strict consensus cladogram with 967 steps was obtained. The cladogram shows a basal polytomy and some geographical correspondence of a few resolved groups obtained in the analysis. These results do not allow the recognition of areas defined by avifaunistic associations. From the potential distribution matrix, the analysis generated 501 equally parsimonious trees, and a strict consensus cladogram of 516 steps was obtained. The cladogram shows a higher resolution because of the number of resolved groups with better geographical correspondence and therefore regions are well‐defined. Main conclusions The correspondence of some groupings of species suggest their validity as areas with biogeographical (historical and/or ecological) meaning. This regionalization in the Baja California avifauna seems to be consistent with previous regionalizations for other groups. Hence, PAE is a useful tool for area categorization if reliable point records and prediction tools are available. Our results suggest that the geographical definition is much better using potential data generated by GARP, particularly when they are contrasted with the results from point data. Thus, this is an excellent alternative for developing biogeographical studies, as well as for improving the use of data from scientific collections and other sources of biodiversity information.     

Hurricane Gilbert and structural changes in a tropical forest in south-eastern Mexico

This paper describes structural change and damage to the natural tree vegetation in the Dr Alfredo Barrera Marín Botanical Garden, following Hurricane Gilbert in September, 1988. Post-hurricane data were compared with pre-hurricane data from the same plots, focusing mainly on composition and structure. Near complete defoliation of trees and plants of the understorey occurred and average foliage loss was estimated to be 4.5 t/ha. The density of trees decreased by 33%, and the basal area decreased by 12%. Small diameter trees accounted for the great majority of losses and trees in the largest diameter classes survived best. The average height of trees in the lower canopy decreased by 6% and for those in the upper canopy by 9%. The frequency of understorey plants decreased by 51% and their cover decreased by 70%. Floristic richness decreased only slightly after the hurricane.     

Deep-water bivalves from the oxygen minimum zone area off the western Peninsula of Baja California,Mexico

ABSTRACT

Eighteen species of deep-sea bivalves were collected below the Oxygen Minimum Zone (OMZ) core off western Mexico. This material was obtained during the research cruises XVI, XVIB (off the northwestern Peninsula of Baja California), and VIII (Gulf of California) of the TALUD project aboard the R/V El Puma. The samples were taken with an epibenthic sledge (710–2077?m deep) and with a box corer (750–2600?m). The species belong to 10 families: Solemyidae, Nuculanidae, Malletiidae, Tindariidae, Limopsidae, Propeamussiidae, Tellinidae, Periplomatidae, Poromyidae and Lyonsiellidae. Environmental parameters (oxygen, salinity, sediments composition and temperature) are given for each sampling station. Tolerance to oxygen depletion is analysed for all deep-water species collected by the TALUD survey off the Baja California Peninsula. The additional file includes shell characteristics and distributional information for each species.     

Changes in forest structure, species diversity and spatial pattern following hurricane disturbance in a Piedmont North Carolina forest, USA

Aims: Large hurricanes have profound impacts on temperate forests,but owing to their infrequent nature these effects have rarelybeen examined in detail. In 1996, Hurricane Fran significantlydamaged many long-term tree census plots in the Duke Foreston the North Carolina Piedmont, thereby providing an exceptionalopportunity to examine pre- and post-hurricane forest compositionaltrajectories. Our goal was to examine immediate, short-term(0–4 years) and longer term (5 year) hurricane-inducedstructural, spatial and compositional changes in the tree population(stem d.b.h > 1 cm) in the context of our detailed, long-termknowledge of the dynamics of these forests. Methods: We surveyed stem damage and tree mortality in 34 long-term permanentplots (ca. 70-year record; 404–1 012 m²) and 7 large mappedtree stands (ca. 20-year record; 5 250–65 000 m²) representingboth transition-phase, even-aged pine stands and uneven-agedupland hardwood forests. We employed three types of damage measuresto quantify stand-level damage severity: percentage of stemsdamaged, percentage of basal area lost and a ‘stand-leveldamage index’. Second-order spatial analysis (Ripley'sK-function) was used to investigate patterns in tree mortality. Important findings: Our study found hurricane effects on the structural attributesof Piedmont forests to be variable and patchy. Changes in treespecies composition, however, were modest. Uprooting was themajor damage type for the overstory trees [diameter at breastheight (d.b.h.) >10 cm] apparently due to the exposure ofthe crowns to high wind combined with heavy rainfall prior toand during the storm. Saplings, juvenile trees and small trees(1–10 cm d.b.h.) of the understory and midstory were mainlydamaged by being pinned or bent by their damaged large neighbors.Hurricane-induced tree mortality varied weakly among species,was positively correlated with pre-hurricane tree size and remainedup to 2-fold higher than pre-hurricane background mortality5 years after the hurricane. Spatial point pattern analysisrevealed a patchy distribution of tree mortality during thehurricane sampling interval. Hurricane Fran resulted in a dramaticincrease in average gap size from ca. 400 m² pre-hurricane toca 1100 m² after the hurricane, whereas maximum gap sizes reached18–34 times larger than the pre-hurricane levels.     

Fire disturbance and forest structure in old‐growth mixed conifer forests in the northern Sierra Nevada,California

Question: This study evaluates how fire regimes influence stand structure and dynamics in old‐growth mixed conifer forests across a range of environmental settings. Location: A 2000‐ha area of mixed conifer forest on the west shore of Lake Tahoe in the northern Sierra Nevada, California. Methods: We quantified the age, size, and spatial structure of trees in 12 mixed conifer stands distributed across major topographic gradients. Fire history was reconstructed in each stand using fire scar dendrochronology. The influence of fire on stand structure was assessed by comparing the fire history with the age, size, and spatial structure of trees in a stand. Results: There was significant variation in species composition among stands, but not in the size, age and spatial patterning of trees. Stands had multiple size and age classes with clusters of similar aged trees occurring at scales of 113 ‐ 254 m². The frequency and severity of fires was also similar, and stands burned with low to moderate severity in the dormant season on average every 9–17 years. Most fires were not synchronized among stands except in very dry years. No fires have burned since ca. 1880. Conclusions: Fire and forest structure interact to perpetuate similar stand characteristics across a range of environmental settings. Fire occurrence is controlled primarily by spatial variation in fuel mosaics (e.g. patterns of abundance, fuel moisture, forest structure), but regional drought synchronizes fire in some years. Fire exclusion over the last 120 years has caused compositional and structural shifts in these mixed conifer forests.     

A new species of Monstrilla (Copepoda: Monstrilloida) from a coastal system of the Baja California Peninsula, Mexico

From plankton samples taken at Puerto Escondido, a Mexican shallow-waterembayment located in the southern portion of the eastern coastof the Baja California Peninsula, a new species of Monstrilla,M.gibbosa, is described from a single adult female specimen.Among several distinctive features on the fifth leg and genitalcomplex, and in the antennular structure and proportions, thenew species can be separated from all other previously knownmonstrilloids by the presence of two anterior ventral protuberanceson the cephalosome.     

Seasonal and interannual variation of sterols in macrophytes from the Pacific coast of Baja California Peninsula (Mexico)

The seasonal and interannual proximate and sterol composition were assessed in two red (Gelidium robustum, Gelidiaceae and Gracilariopsis sjoestedtii, Gracilariaceae), two brown (Ecklonia arborea, Lessoniaceae and Macrocystis pyrifera, Laminariaceae), and two green (Ulva lactuca and Ulva clathrata, Ulvaceae) macroalgae species and the seagrass Phyllospadix torreyi (Zosteraceae) sampled over 3 years in a subtropical climate in Baja California Sur, Mexico. Each macroalga had a particular sterol composition that was typical of their taxonomic group. The red algae had cholesterol as the major sterol; 92% on average in G. robustum and 90% in G. sjoestedtii, followed by t‐dehydrosterol and brassicasterol. In the brown algae the major sterol was fucosterol, which accounted for approx. 90% and 92% of total sterols for M. pyrifera and E. arborea, respectively, followed by campesterol (7% and 5%) and isofucosterol (1.5% and 1.3%). The green algae had isofucosterol as the major sterol, with 92% on average for U. lactuca and 87% for U. clathrata, followed by cholesterol, fucosterol, and brassicasterol or norcholesterol. The seagrass P. torreyi had β‐sitosterol as the major sterol (39 to 89%, depending on the season), followed by campesterol (4 to 7%), stigmasterol (3 to 6%), and isofucosterol (1.7 to 3.5%). Four (cholesterol, campesterol, fucosterol, and isofucosterol) of the 14 sterols identified in macroalgae and the seagrass could be used to differentiate between classes (Florideophyceae – red, Phaeophyceae – brown, Ulvophyceae – green, and Monocots – seagrass) both seasonally and interannually. The seasonal and interannual sterol composition of macroalgae and seagrass was quite stable, with the exception of red G. sjoestedtii sampled in August and green macroalga U. lactuca and seagrass P. torreyi both sampled in May 2002. Seasonal and interannual variations of proximate and sterol composition are discussed in relation to their reproductive state and environmental parameters.     

Contributions toward understanding the biodiversity of Passiflora in North America: Updates and a new combination from the Baja California Peninsula,Mexico and vicinity

The Baja California Peninsula and surrounding landmasses harbor an abundant flora in an otherwise harsh and arid environment. Of the many plant groups native to this peninsular and insular region, passionflowers (Passiflora, Passifloraceae) are represented by several conspicuous taxa that all belong to a single lineage, section Dysosmia. Basic questions remain regarding this group, particularly the taxonomic status among the Passiflora arida complex. Therefore, we investigated the claims of endemism, habitat characteristics, and taxon boundaries with in section Dysosmia in the Baja California region using extensive sampling of herbarium specimens and iNaturalist observations. We confirmed that only one of the native Passiflora taxa (P. fruticosa) was endemic to the Baja California Peninsula, with an additional taxon (P. palmeri) considered near‐endemic. Environmental data revealed significant distinctions between the habitats of many of the native taxa as well as within the P. arida complex, especially with respect to precipitation and temperature tolerances. Geometric morphometric analyses of leaf shape were largely not successful at separating taxa, indicating leaf shape may not be a good indicator of taxon identity in this particular group. Based on ecological differences and discrete macro‐ and micromorphological features, a varietal name is here synonymized and a new combination is proposed: Passiflora pentaschista.     

Molting phenology of the Pacific harbor seal (Phoca vitulina richardii) on two islands off the Baja California Peninsula,Mexico

We document and compare the annual molt of the Pacific harbor seal (Phoca vitulina richardii) on two islands off the west coast of the Baja California Peninsula that are the northern and southern extremes of its distribution in Mexico. During 2014, observations were made from March to July on Todos Santos Island (northern extreme) and from January to June on San Roque Island (southern extreme). On Todos Santos, the premolt lasted 15 wk (March–June) and the molt 12 wk (April–July). On San Roque, the premolt lasted 22 wk (January–June) and the molt 17 wk (February–June). The proportion of seals undergoing molt peaked on 26 May on Todos Santos and on 7 June on San Roque. Shedding of old hair most commonly initiated on the torso and progressed to the head and flippers (reverse molting pattern). The period when the highest number of harbor seals haul out in Mexico is in late April on the more southerly islands and in early May on the more northerly islands, when a large proportion of seals are in premolt.     

Distribution and species richness of woody dryland legumes in Baja California,Mexico

Abstract. We analysed the biogeographic patterns of woody legumes in the Baja California peninsula, NW Mexico. From the specimen labels of eight herbaria, we digitized 4205 records from 78 species, and projected them onto a grid of 205 cartographic cells (20’ longitude × 15’ latitude). Most species followed distribution patterns that coincide with floristic subdivisions of the peninsula. Endemism is high, reaching 60–70% in the centre of the peninsula, where the driest deserts are found and where significant floristic changes took place during Pleistocene glacial events. The number of cartographic cells (i.e. their geographic ranges) were log‐normally distributed, as has been reported for many other taxa. Floristic richness was found to be clumped around some cells where the observed richness is significantly higher than could be expected from chance variation. We tested the hypothesis that these ‘hotspots’ could be attributable to great collection efforts or to large land surfaces, but we still found 16 cells where richness is significantly high once these two factors are accounted for. Species richness and micro‐endemism increase towards the south, conforming to Rapoport's rule that predicts that species ranges become smaller towards the equator while richness increases. The floristic hotspots for woody legumes in Baja California occur in the Cape Region and along the Sierra de la Giganta in the southern Gulf Coast, where 77% of the total peninsular legume flora can be found. These hotspots are mostly unprotected, and should be considered priority areas for future conservation efforts.     

Diet and nutrition of range goats on a sarcocaulescent shrubland from Baja California Sur,Mexico

Botanical composition of diets of range goats was studied to determine seasonal preference indices of forage species and nutritional quality of selected diets on a sarcocaulescent shrubland from the Sonoran desert in Baja California Sur, Mexico. Extrusas from five esophageal cannulated adult female goats (40 kg of BW) were collected at the beginning and at the end of each season from April of 2001 to March of 2002. At the end of spring, goats selected higher amounts of browse legumes and cacti species, but during late summer, autumn and winter goats mainly preferred browse non-legumes followed by forb species. Goats selected a constant diet in truly digestible crude protein (annual mean = 11 ± 0.4% DM) and metabolizable energy (2.4 ± 0.1 Mcal kg⁻¹) throughout the year. However, during late spring and early summer, goats selected diets higher in non-structural carbohydrates (NSC), truly IVDOM and truly digestible NSC. Dietary Ca, Mg, K, Mn, Fe were in substantial amounts to meet requirements of a range goat weighing 40.0 kg BW consuming 76.3 g DM kg^0.75 d⁻¹ in all seasons. It is concluded that range goats may require supplementary protein and energy to overcome pregnancy and lactation requirements throughout the year. Copper content appeared marginally deficient almost the entire year and Zn during late summer and autumn.     

Mycorrhizal characterization of the boojum tree, <Emphasis Type="Italic">Fouquieria columnaris</Emphasis>, an endemic ancient tree from the Baja California Peninsula,Mexico

The mycorrhizal association with the boojum tree, Fouquieria columnaris (=Idria columnaris), was studied. This unusual tree is almost exclusively endemic to granite and volcanic soils in highly arid areas of the Baja California Peninsula of Mexico. Soil and root samples from ten sites, covering the extent of geographic distribution of the tree on the peninsula, were analyzed. The roots of the boojum tree contained all structures of an arbuscular mycorrhizal (AM) association. Morphologically different species, 23 in number, were identified in close vicinity to the boojum tree indicating that F. columnaris is associated with a high number of AM species of several AM genera and families.     

Metabarcoding reveals seasonal and spatial patterns of arthropod community assemblages in two contrasting habitats: Desert and oasis of the Baja California Peninsula,Mexico

Aim

Desert springs or oases are the only permanent mesic environments in highly water-limited arid regions. Oases have immense cultural, evolutionary and ecological importance for people and a high number of endemic and relic species. Nevertheless, they are also highly vulnerable ecosystems, with invasive species, overexploitation and climate change being the primary threats. We used the arthropod communities' spatiotemporal diversity and distribution patterns as a proxy to understand biodiversity dynamics in two geographically close but ecologically contrasting and highly threatened ecosystems: deserts and oases.

Location

Baja California Peninsula, Mexico.

Methods

Arthropod communities at five oases and surrounding desert scrub areas were sampled in two seasons. Using DNA metabarcoding and traditional taxonomic surveys, we tried to identify what biotic and abiotic characteristics of the habitat are important drivers of arthropod diversity and how these characteristics can change across spatial and temporal scales.

Results

Over 6200 individuals representing 23 orders were collected. In oasis samples, the community composition fluctuated more in space (i.e. among sites) than in time (i.e. seasons). Thus, seasonal changes did not affect oasis community diversity and composition, but the dissimilarity among sites increased with geographic distance. Moreover, anthropic activities negatively correlated with arthropod diversity in oases. On the other hand, the season, geography (e.g. latitude) and biotic characteristics of the habitat (e.g. sampled scrub species) significantly affected the diversity and composition of the desert arthropod communities.

Main Conclusions

Neutral dynamics (e.g. historical climatic events, dispersal limitation and spatial component) and human impact significantly influenced the biodiversity patterns of each oasis. In contrast, the habitat's seasonal variation and biotic characteristics were the most important variables influencing the diversity of the desert communities. Baja California oases harbour distinct invertebrate communities; therefore, each oasis should be conserved individually to preserve these unique assemblages.