Spatiotemporal Variation in Shallow-Water Freshwater Fish Distribution and Abundance in a Large Subtropical Coastal Lagoon

Patos Lagoon is located off the southern Brazilian coast and represents one of the largest coastal lagoons in the world. We estimated hydrological and physicochemical conditions associated with spatial variation in the abundance and diversity of freshwater fishes along the lagoon, and inter-annual variability in abundances of freshwater fishes occurring in its estuarine zone. During our study, the region experienced two periods of average rainfall and two periods with above-average rainfall. The characids Astyanax eigenmaniorum and Oligosarcus jenynsii and the siluriform Parapimelodus nigribarbis were the most abundant freshwater fishes in the estuary during wet periods when water levels were higher and salinity was lower. Increases in abundance of these species in the estuarine area, all of which members of primary-division freshwater families, apparently were associated with pulses of reproduction and passive transport from freshwater habitats located near middle and upper lagoon reaches. Abundance of species from secondary freshwater families, such as poeciliids and cichlids, were less correlated with hydrological conditions, and their patterns of occurrence in the estuary suggest active migration from nearby freshwater habitats draining into this area. Findings indicate that freshwater discharge in the basin and expansion/retraction of freshwaters in the middle-upper lagoon determined patterns of freshwater fish abundance and species richness in the estuarine zone.     

A new fossil Aphanius species from the Upper Miocene of Armenia (Eastern Paratethys)

A new fossil fish species, Aphanius yerevanicus (Cyprinodontiformes, Cyprinodontidae), is described based on a well-preserved, articulated skeleton from the early Upper Miocene of Yerevan, Armenia (Eastern Paratethys). The fish-bearing sediments contain a fossil assemblage indicative of a euryhaline environment. The new species differs from previously described fossil Aphanius species by the possession of caudal ribs articulating with the first haemal spine, a remarkably low number of abdominal vertebrae, and the morphology of the tricuspid jaw teeth. Co-occurrence of A. yerevanicus with Prolebias mutilus Bogachev, 1936 at Yerevan suggests that sympatric occurrence of several members of the Cyprinodontiformes continued successfully throughout the Miocene in euryhaline environments where competition between these forms and other fishes was low because of the unstable salinity.     

Patterns of reproduction and development of selected resident teleosts of Florida salt marshes

A wide variety of teleost fishes occur in tidal marshes of Atlantic and Gulf coasts of Florida, few of which breed in these habitats or remain there for extended periods of time. A significant fraction of teleosts that do so are members of one of five families. Eleven representative species belonging to these families, whose reproduction and development are considered here, include: Adinia xenica, Fundulus confluentus, F. grandis and F. similis (Fundulidae); Cyprinodon variegatus, Floridichthys carpio and Jordanella floridae (Cyprinodontidae); Gambusia holbrooki and Poecilia latipinna (Poeciliidae); Mugil cephalus (Mugilidae); and Dormitator maculatus (Eleotridae). Spawning or birth locations, patterns of growth and development, times of use of the salt marsh as a nursery area, and development of salinity tolerances/osmotic regulatory capabilities were evaluated for each, considering these in the context of variability of environmental conditions, especially of salinity. Five different patterns of reproduction are shown by these 11 species, and only A. xenica appears to be limited to reproducing in the salt marsh environment. Some of these species are capable of reproducing throughout the year. Several of the species are annuals, most others live only 2 or 3 years. Eight species (those other than M. cephalus, A. xenica and G. holbrooki) were found to show no size relationship, large juvenile to adult sizes, in osmotic regulatory capabilities.     

Interrelationships of Atherinomorpha (medakas, flyingfishes, killifishes, silversides, and their relatives): The first evidence based on whole mitogenome sequences

Series Atherinomorpha, with its plentiful number of species and highly diversified ecological and morphological characters, is the most successful fish group at the surface layer of the ocean and many freshwater habitats, comprising 1552 species classified into three orders, six suborders, 21 families, and 193 genera. The group includes one of the most important research model organisms, the medaka (Oryzias latipes), together with diverse fishes with morphological, physiological, and ecological specializations, such as highly developed pectoral fins to glide, self-fertilization, and live-bearing. In this study, we examined the whole mitochondrial genomes (mitogenomes) from 17 species representing all of the three orders and six suborders within Atherinomorpha, with data from 70 additional percomorph species as ingroups, and two non-percomorph outgroup species. We subjected the unambiguously aligned mitogenome sequences to partitioned maximum likelihood and Bayesian phylogenetic analyses. The resulting phylogenies recovered a monophyletic Atherinomorpha within the Percomorpha, and demonstrated its phylogenetic affinity to the percomorph fishes (including cichlids) spawning demersal eggs with filaments. This study, further, provided the first molecular evidence for the monophyly of the respective atherinomorph orders (Atheriniformes, Beloniformes, and Cyprinodontiformes) with high posterior probabilities and mostly high bootstrap values, providing an important basis for the future studies on the phylogeny and evolution of this diverse group.     

Genomic organization of duplicated short wave-sensitive and long wave-sensitive opsin genes in the green swordtail, <Emphasis Type="Italic">Xiphophorus helleri</Emphasis>

Background  

Long wave-sensitive (LWS) opsin genes have undergone multiple lineage-specific duplication events throughout the evolution of teleost fishes. LWS repertoire expansions in live-bearing fishes (family Poeciliidae) have equipped multiple species in this family with up to four LWS genes. Given that color vision, especially attraction to orange male coloration, is important to mate choice within poeciliids, LWS opsins have been proposed as candidate genes driving sexual selection in this family. To date the genomic organization of these genes has not been described in the family Poeciliidae, and little is known about the mechanisms regulating the expression of LWS opsins in any teleost.     

B chromosomes: an update about their occurrence in freshwater Neotropical fishes (Teleostei)

In freshwater Neotropical fishes, supernumerary chromosomes or B chromosomes have been found in 61 species so far, distributed in 16 families of seven different orders and in distinct hydrographic basins. The order Characiformes is the one that possesses the most species with these chromosomes, including 31 species from six different families. The order Siluriformes has 21 species from five families, with Rhamdia , of the family Heptapteridae, being the most common genus where these chromosomes are found. The order Perciformes has five species with B chromosomes in only one family, Cichlidae, and the orders Beloniformes, Cyprinodontiformes, Gymnotiformes and Synbranchiformes contain only one species each with extra chromosomes. They are found as microchromosomes in Schizodon , Astyanax , Moenkhausia , Cyphocharax , Steindachnerina , Prochilodus , Rhamdia , Iheringichthys and Loricaria , among others, up to supernumerary macrochromosomes as in Astyanax , varying in morphology as well as number, showing evidence of the wide diversity of B chromosomes in Neotropical fishes.     

Biochemical differentiation between some genera of African Cyprinodontidae

The polymorphism of 12 loci encoding enzymes has been investigated in 11 species of tropical freshwater fishes of the family Cyprinodontidae. These species can be divided into six genetic groups (A to F) on the basis of NEI'S genetic distances. The genetic differentiation between these groups is equivalent and very high.     

Effects of salinity and temperature on oxygen consumption in a freshwater population of Palaemonetes antennarius (Crustacea,decapoda)

• 1.1. After step-like increases in salinity the shrimps exhibit the smallest increase in oxygen consumption in the lower salinity range. At higher salinities the shrimps show longer recovery times and greater increases in the metabolic rate after salinity shock.
• 2.2. In steady-state experiments, the shrimps display the lowest oxygen consumption rates near the isosmotic point. The lowest metabolic rates occur at salinities of 3‰ and 10‰ At salinities of 20‰ and above the rate of metabolism increases by 20–30%.
• 3.3. The calculated osmoregulatory work for animals in fresh water amounts to only 2.7% of routine metabolism and drops to 1.1% for shrimps in 3‰ and 0.7% in 5‰ salinity.
• 4.4. Locomotory activity in the form of position change was not responsible for the increased oxygen consumption of the animals after salinity shocks. A “tentative swimming activity” by fast and frequent beating of the pleopods without position change may be an important factor in the increase of metabolic rates.
• 5.5. In its temperature response, the brackish water population has a higher metabolic rate than the freshwater one. Between 5 and 35°C Q ₁₀-values range from 4.01 to 1.37.

     

Some 20th century fish discoveries

Of the approximately 1.5 million species described to date, about 48 170 (3.2%) are vertebrates. Of these 24 618 (51%) are fishes. Amazingly, 41% of fishes are found in fresh water which makes up a negligible percentage of the water on earth. The sea accounts for 97% of all water on the planet and contains 58% of the fish species, mostly from shallow, warm-coastal areas. The families Cichlidae, Cyprinidae, Characidae, Loricariidae, and Cyprinodontidae constitute about half of all the recently described new freshwater fish species named in the period 1978–1993. The Gobiidae and Serranidae are the marine families with the largest number of recently described new species. The most new freshwater teleost names came from South America (39%), Africa (32%) and Asia (17%). New fish species continue to be described at the rate of roughly 130–160 each year. An estimated 13 775 new fish names have been proposed in this century, representing about 56% of all currently known fish species. Three species are discussed in detail to represent remarkable examples of 20th century fish discoveries: the coelacanth Latimeria chalumnae, the salamanderfish Lepidogalaxias salamandroides of Western Australia, and the megamouth shark Megachasma pelagios. This revised version was published online in July 2006 with corrections to the Cover Date.     

Evolution,ecology and physiology of amphibious killifishes (Cyprinodontiformes)

The order Cyprinodontiformes contains an exceptional diversity of amphibious taxa, including at least 34 species from six families. These cyprinodontiforms often inhabit intertidal or ephemeral habitats characterized by low dissolved oxygen or otherwise poor water quality, conditions that have been hypothesized to drive the evolution of terrestriality. Most of the amphibious species are found in the Rivulidae, Nothobranchiidae and Fundulidae. It is currently unclear whether the pattern of amphibiousness observed in the Cyprinodontiformes is the result of repeated, independent evolutions, or stems from an amphibious common ancestor. Amphibious cyprinodontiforms leave water for a variety of reasons: some species emerse only briefly, to escape predation or capture prey, while others occupy ephemeral habitats by living for months at a time out of water. Fishes able to tolerate months of emersion must maintain respiratory gas exchange, nitrogen excretion and water and salt balance, but to date knowledge of the mechanisms that facilitate homeostasis on land is largely restricted to model species. This review synthesizes the available literature describing amphibious lifestyles in cyprinodontiforms, compares the behavioural and physiological strategies used to exploit the terrestrial environment and suggests directions and ideas for future research.     

Temperature Tolerances of North American Freshwater Fishes Exposed to Dynamic Changes in Temperature

Traditionally lower and upper temperature tolerances of fishes have been quantified in the laboratory via three different experimental approaches: the Fry or incipient lethal temperature (ILT), critical thermal (CTM) and chronic lethal (CLM) methodologies. Although these three experimental laboratory approaches generate endpoints which are quantitatively expressed as a temperature, are determined experimentally with random samples of fish acclimated to specific temperatures, and involve both time and temperature as major test variables, they do not quantify the same response. All three approaches generate valuable, albeit different, information concerning the temperature tolerance of a species. In this review we have summarized published research concerning the tolerance of North American freshwater fishes to dynamic changes in temperature, i.e., tolerance is tested by methods that gradually change temperatures until biological stress is observed. We found more than 450 individual temperature tolerances listed in 80 publications which present original dynamic temperature tolerance data for 116 species, 7 subspecies and 7 hybrids from 19 families of North American freshwater fishes. This total represents about 1/3 of the families and 1/6 of the known North American freshwater species. Temperature tolerance data were partitioned by experimental approach, i.e., critical thermal method (CTM) and chronic lethal method (CLM), and direction of temperature change. Although both CTM and CLM expose fish to dynamic changes in water temperature, these two methods differ in temperature change rates and test endpoints, and hence measure different aspects of thermal stress. A majority of the 80 studies employed CTM to assess temperature tolerance, in particular determination of CTmaxima. One or more CTmaxima has been reported for 108 fishes. Twenty-two fishes have reported highest CTmaxima of 40°C or higher. Several species in the family Cyprinodontidae have generated some of the highest CTmaxima reported for any ectothermic vertebrate. For a variety of reasons, data concerning tolerance of low temperatures are less plentiful. Low temperature tolerance quantified as either CTminima or CLminima were found for a total of 37 fishes. Acclimation temperature exerts a major effect on the temperature tolerance of most North American fish species and it is usually strongly linearly related to both CTmaxima and CTminima. Although we uncovered dynamic temperature tolerance data for 130 fishes, only a single dynamic, temperature tolerance polygon has been published, that for the sheepshead minnow, Cyprinodon variegatus.     

Why are there so few freshwater fish species in most estuaries?

The freshwater fish assemblage in most estuaries is not as species rich as the marine assemblage in the same systems. Coupled with this differential richness is an apparent inability by most freshwater fish species to penetrate estuarine zones that are mesohaline (salinity: 5·0–17·9), polyhaline (salinity: 18·0–29·9) or euhaline (salinity: 30·0–39·9). The reason why mesohaline waters are avoided by most freshwater fishes is difficult to explain from a physiological perspective as many of these species would be isosmotic within this salinity range. Perhaps, a key to the poor penetration of estuarine waters by freshwater taxa is an inability to develop chloride cells in gill filament epithelia, as well as a lack of other osmoregulatory adaptations present in euryhaline fishes. Only a few freshwater fish species, especially some of those belonging to the family Cichlidae, have become fully euryhaline and have successfully occupied a wide range of estuaries, sometimes even dominating in hyperhaline systems (salinity 40+). Indeed, this review found that there are few fish species that can be termed holohaline (i.e. capable of occupying waters with a salinity range of 0–100+) and, of these taxa, there is a disproportionally high number of freshwater species (e.g. Cyprinodon variegatus, Oreochromis mossambicus and Sarotherodon melanotheron). Factors such as increased competition for food and higher predation rates by piscivorous fishes and birds may also play an important role in the low species richness and abundance of freshwater taxa in estuaries. Added to this is the relatively low species richness of freshwater fishes in river catchments when compared with the normally higher diversity of marine fish species for potential estuarine colonization from the adjacent coastal waters. The almost complete absence of freshwater fish larvae from the estuarine ichthyoplankton further reinforces the poor representation of this guild within these systems. An explanation as to why more freshwater fish species have not become euryhaline and occupied a wide range of estuaries similar to their marine counterparts is probably due to a combination of the above described factors, with physiological restrictions pertaining to limited salinity tolerances probably playing the most important role.     

Scale formation in selected fundulid and cyprinodontid fishes

Patterns of scale formation (onset, points of origin, completion, and spatial pattern) were examined for six species of killifishes in two families (Cyprinodontidae: Cyprinodon variegatus, and Fundulidae: Fundulus confluentus, F. heteroclitus, F. luciae, F. majalis, and Lucania parva) to determine if the patterns are another useful indicator for the transition from the larval to juvenile periods. In some species, the patterns were very similar, with scale formation originating on/near the caudal peduncle, then the dorsal surface of the head (in fundulids only), and later on the lateral surfaces of the head, and on the ventral surface of the trunk at the level of the pectoral fin. The timing of scale formation, relative to fish size, was later than or overlapped with other morphological characters (e.g., fin ray formation, juvenile/adult body shape) often used to mark the larval/juvenile transition. The onset of scale formation, across all species, occurred between 8 and 13 mm TL. Completion of scale formation occurred between 18 and 23 mm TL. At completion, scales covered 86–99% of the trunk and head. Completion of scale formation in these fishes is one of the last external morphological changes to occur during the larval to juvenile transition. For these species, and other flatfishes we have examined in detail, it appears that scale formation may be useful in helping to define the end of the larval period and the beginning of the juvenile period. Further studies, of divergent groups of teleosts, are necessary to determine if this length-based approach has broad validity.     

Comparative electrophoretic studies of muscle and eye lens proteins in freshwater fish of Iraq

Muscle myogens and eye lens proteins have been studied in ten species of freshwater fish from Iraq. The electrophoretic analysis revealed that the muscle myogens can be considered as a good taxonomic criterion to differentiate the family Mugilidae from the Cyprinodontidae and Cyprinidae, but not between the families Poeciliidae and Cyprinodontidae. Within the Cyprinidae the muscle myogens can be used to diferentiate Barbus grypus from the remaining species of this family. Eye lens proteins are not considered a good taxonomic criterion to differentiate the members of the four families studied, but can distinguish B. belawayei and B. grypus from the other Cyprinid species.     

Effects of an artificial and annual opening of a natural sandbar on the fish community in a coastal lagoon system: a case study in Lagoa do Peixe floodplains,southern Brazil

Two hypotheses were tested: that the artificial sandbar opening decreases the richness, diversity and abundance of fishes and alters the fish composition in floodplain ponds; that the salinity variations influence fish richness, diversity, abundance, as well as composition. Results suggest that artificial sandbar openings did not reduce the richness or diversity of freshwater fishes in southern Brazil floodplain ponds. Nevertheless, this process causes an increase in salinity, which determines significant differences in species composition between natural and managed areas. In this sense, the artificial sandbar opening must be considered with caution, since the area of study is one of the most important conservation units in wetland systems of southern Brazil.     

Where are they all from? – sources and sustainability in the ornamental freshwater fish trade

The global trade in ornamental fish involves c. 125 countries worldwide and is worth c. US $15–30 billion each year. This total is dominated (90%) by freshwater fishes, most of which are sourced from breeding facilities located in developing countries, typically in Asia or South America, but also in Israel, USA and Europe. Some fish are still obtained from natural (wild) sources, but the exact percentage of wild-caught fish is difficult to quantify given a lack of reliable data. Although c. 1000 species of freshwater fishes are widely available (from a total of > 5300 on sale), the most dominant freshwater fishes in the market comprise only 30 species from the orders Cyprinodontiformes, Perciformes, Characiformes and Siluriformes. In this perspectives review paper, illustrative example case studies of wild-fish collecting (Barcelos and Rio Xingu, Brazil) and breeding projects (Java, Indonesia) are described. In addition, wild-collecting expeditions to West Papua, Indonesia are discussed, focused on discovering novel species of rainbowfish (Melanotaeniidae) for breeding in captivity. Sustainability of the aquarium industry is considered in its broadest sense. The aquarium industry has been portrayed as both a major threat to natural ecosystems, but also as being part of the solution in terms of helping to maintain species when they have gone extinct in the wild or offering an income to impoverished citizens who might otherwise engage in much more destructive practices.     

Influence of steady-state and fluctuating salinities on the oxygen consumption and activity of some brackish water shrimps and fishes

Oxygen consumption, locomotory activity and, in some cases, osmoregulatory responses of different populations of Palaemon adspersus (Rathke) and Pomatoschistus microps (Krøyer) from the Isefjord ($\text{S 19‰}$) and Karrebaek Fjord ($\text{S 12‰}$) in Denmark and the Barther Bodden ($\text{S 6‰}$) in the G.D.R. to short-term salinity fluctuations, and after long-term adaptation, were tested. The same tests were performed on populations of Gasterosteus aculeatus (L.), Palaemonetes varions (Leach) (both from Barther Bodden, G.D.R.) and Palaemon elegans (Rathke) (Black Sea, Bulgaria, $\text{S 18‰}$). The steady-state experiments showed that the standard metabolic rates of P. adspersus and Pomatoschistus microps reach their lowest levels at mean biotope salinities at both 10 and 20°C. In contrast, the routine metabolic rates of both species are independent of salinity in the ecological salinity range.All Palaemon adspersus and Pomatoschistus microps populations responded to sudden changes in salinity with increased locomotory activity and respiration regardless of the direction of stressing. Metabolic adaptation in these euryhaline species, which is not synchronous with osmotic readjustment, takes from 5 to 12 h, depending on the salinity gradient.The polystenohaline Palaemon elegans from the Black Sea and the holeuryhaline Palaemonetes varians from the Barther Bodden exhibit similar short adaptation times (≈ 2 h) to identical salinity gradients but in different salinity zones.     

Effects of salinity on rates of protein synthesis and oxygen uptake in the post-larvae and juveniles of the tropical prawn Macrobrachium rosenbergii (de Man)

Protein synthesis is a major determinant of growth and yet little is known about the environmental factors that influence protein synthesis rates in farmed freshwater prawns. To this end, post-larvae and juveniles of Macrobrachium rosenbergii were exposed to various salinities (0, 14, 30‰) to determine whole-animal rates of fractional protein synthesis (k_s) and oxygen uptake. In the post-larvae that migrate upstream from brackish to freshwater areas, whole-animal k_s was unaffected by salinity, but rates of oxygen uptake were significantly lower at 14‰. In the freshwater juveniles, a different response was observed, as mean k_s was significantly higher at 14‰ compared with 0‰, but rates of oxygen uptake remained unchanged. Such differences are thought to be related to the energetic costs of osmoregulation and to the ability to maintain osmotic gradients in freshwater. In an additional experiment, acclimation temperature (20, 26, 30 °C) had a direct effect on k_s in juveniles held at 0‰. In all cases, changes in k_s resulted from alterations in RNA activity at constant RNA capacity. In juveniles at least, whole-animal rates of protein synthesis were highest at 14‰ and 30 °C which corresponds to the optimal salinity and temperature recommended for the growth and culture of M. rosenbergii.     

Assessment of the relationships of geographic variation in species richness to climate and landscape variables within and among lineages of North American freshwater fishes

Aim Geographic variation in species richness is a well‐studied phenomenon. However, the unique response of individual lineages to environmental gradients in the context of general patterns of biodiversity across broad spatial scales has received limited attention. The focus of this research is to examine relationships between species richness and climate, topographic heterogeneity and stream channel characteristics within and among families of North American freshwater fishes. Location The United States and Canada. Methods Distribution maps of 828 native species of freshwater fishes were used to generate species richness estimates across the United States and Canada. Variation in species richness was predicted using spatially explicit models incorporating variation in climate, topography and/or stream channel length and stream channel diversity for all 828 species as well as for the seven largest families of freshwater fishes. Results The overall gradient of species richness in North American freshwater fishes is best predicted by a model incorporating variables describing climate and topography. However, the response of species richness to particular climate or landscape variables differed among families, with models possessing the highest predictive ability incorporating data on climate, topography and/or stream channel characteristics within a region. Main conclusions The correlations between species richness and abiotic variables suggest a strong influence of climate and physical habitat on the structuring of regional assemblages of North American freshwater fishes. However, the relationship between these variables and species richness varies among families, suggesting the importance of phylogenetic constraints on the regulation of geographic distributions of species.