<Emphasis Type="Italic">Streptomyces ginkgonis</Emphasis> sp. nov., an endophyte from <Emphasis Type="Italic">Ginkgo biloba</Emphasis>

A novel endophytic actinomycete strain, designated KM-1-2^T, was isolated from seeds of Ginkgo biloba at Yangling, China. A polyphasic approach was used to study the taxonomy of strain KM-1-2^T and it was found to show a range of phylogenetic and chemotaxonomic properties consistent with those of members of the genus Streptomyces. The diamino acid of the cell wall peptidoglycan was identified as LL-diaminopimelic acid. No diagnostic sugars were detected in whole cell hydrolysates. The predominant menaquinones were identified as MK-9(H₆) and MK-9(H₈). The diagnostic phospholipids were found to be phosphatidylethanolamine and phosphatidylcholine. The DNA G + C content of the novel strain was determined to be 72.9 mol%. The predominant cellular fatty acids (> 10.0?%) were identified as iso-C_14?:?0, iso-C_16?:?0, C_16?:?0 and C_17?:?0 cyclo. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that the strain is closely related to Streptomyces carpaticus JCM 6915^T (99.3%), Streptomyces harbinensis DSM 42076^T (98.9%) and Streptomyces cheonanensis JCM 14549^T (98.5%). DNA-DNA hybridizations with these three close relatives gave similarity values of 39.1 ± 1.9, 35.8 ± 2.3, and 47.4 ± 2.7%, respectively, which indicated that strain KM-1-2^T represents a novel species of the genus Streptomyces. This is consistent with the morphological, physiological and chemotaxonomic data. Cumulatively, these data suggest that strain KM-1-2^T represents a novel Streptomyces species, for which the name Streptomyces ginkgonis sp. nov. is proposed, with the type strain KM-1-2^T (= CCTCC AA2016004^T = KCTC 39801^T).     

<Emphasis Type="Italic">Plantactinospora solaniradicis</Emphasis> sp. nov., a novel actinomycete isolated from the root of a tomato plant (<Emphasis Type="Italic">Solanum lycopersicum</Emphasis> L.)

A Gram-positive, non-motile actinomycete, designated strain NEAU-FJL1^T, was isolated from tomato root (Solanum lycopersicum L.) collected from Harbin, Heilongjiang province, north China. The strain formed single spores with smooth surfaces from substrate mycelia. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NEAU-FJL1^T should be affiliated with the genus Plantactinospora and forms a distinct branch with its close neighbour Plantactinospora soyae NEAU-gxj3^T (99.2% sequence similarity). The cell wall was found to contain meso-diaminopimelic acid and the whole cell sugars were identified as xylose, glucose, arabinose and galactose. The predominant menaquinones were identified as MK-10(H₆) and MK-10(H₄). The phospholipid profile was found to consist of diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol. The major fatty acids were identified as C_15:0, iso-C_16:0, anteiso-C_17:0, C_17:0 and iso-C_15:0. With reference to phenotypic characteristics, phylogenetic data and DNA–DNA hybridization results, strain NEAU-FJL1^T can be distinguished from its most closely related strain and classified as a new species, for which the name Plantactinospora solaniradicis sp. nov. is proposed. The type strain is NEAU-FJL1^T (= DSM 100596^T = CGMCC 4.7284^T).     

<Emphasis Type="Italic">Streptomyces lutosisoli</Emphasis> sp. nov., a novel actinomycete isolated from muddy soil

A novel Gram-stain positive, spore-forming, aerobic actinomycete, designated strain NEAU-QTH3-11^T, was isolated from muddy soil collected from a stream in Qitaihe, Heilongjiang Province, northeast China and characterised using a polyphasic approach. The 16S rRNA gene sequence analysis showed that strain NEAU-QTH3-11^T belongs to the genus Streptomyces and is closely related to Streptomyces rhizosphaerihabitans NBRC 109807^T (99.38%) and Streptomyces mirabilis JCM 4791^T (99.03%). Phylogenetic analysis based on the 16S rRNA gene sequences indicated that the strain formed a cluster with S. rhizosphaerihabitans NBRC 109807^T and Streptomyces siamensis NBRC 108799^T (98.62%). The menaquinones were identified as MK-9(H₈), MK-9(H₆) and MK-9(H₄). The phospholipid profile was found to consist of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, an unidentified phospholipid and an unidentified lipid. The major fatty acids were identified as anteiso-C_15:0, iso-C_16:0, C_16:0 and C_15:0. However, multilocus sequence analysis based on five house-keeping genes (atpD, gyrB, rpoB, recA and trpB), low DNA-DNA hybridization results and some phenotypic, physiological and biochemical properties could differentiate the strain from its close relatives in the genus Streptomyces. Therefore, strain NEAU-QTH3-11^T is considered to represent a novel species of the genus Streptomyces, for which the name Streptomyces lutosisoli sp. nov. is proposed, with NEAU-QTH3-11^T (=DSM 42165^T=CGMCC 4.7198^T) as the type strain.     

<Emphasis Type="Italic">Streptomyces thermoalkaliphilus</Emphasis> sp. nov., an alkaline cellulase producing thermophilic actinomycete isolated from tropical rainforest soil

During an investigation exploring potential sources of novel thermophilic species and natural products, a novel thermophilic and alkaliphilic actinomycete with alkaline cellulase producing ability, designated strain 4-2-13^T, was isolated from soil of a tropical rainforest in Xishuangbanna, Yunnan province, China. The morphological and chemotaxonomic characteristics of strain 4-2-13^T are consistent with those of the members of the genus Streptomyces. The strain forms extensively branched aerial mycelia and substrate mycelia. Spiral spore chains were observed on aerial mycelia; spores were oval to cylindrical, with smooth surfaces. The organism was found to contain ll-diaminopimelic acid as the diagnostic diamino acid in the cell wall peptidoglycan. The whole cell hydrolysates were found to contain glucose and ribose. The cellular fatty acid profile mainly consists of anteiso-C_17:0 and iso-C_16:0. The menaquinones were identified as MK-9(H₈), MK-10(H₆) and MK-9(H₆). The polar lipids profile were found to consist of diphosphatidylglycerol, phosphatidylmethylethanolamine, a ninhydrin-positive glycophospholipid, phosphatidylinositol, phosphatidylglycerol and unidentified glycolipids. The 16S rRNA gene sequence analysis showed that the organism belongs to the genus Streptomyces and in the 16S rRNA gene tree it formed a distinct phyletic line together with the closely related type strain Streptomyces burgazadensis Z1R7^T (95.2% sequence similarity). However, the phenotypic characteristics of strain 4-2-13^T are significantly different from those of S. burgazadensis Z1R7^T. Based on the phenotypic, chemotaxonomic and phylogenetic characteristics, strain 4-2-13^T represents a novel species in the genus Streptomyces, for which the name Streptomyces thermoalkaliphilus sp. nov. is proposed. The type strain is 4-2-13^T (= DSM 42159^T = CGMCC 4. 7205^T).     

<Emphasis Type="Italic">Streptomyces luozhongensis</Emphasis> sp. nov., a novel actinomycete with antifungal activity and antibacterial activity

A novel actinomycete strain, designated TRM 49605^T, was isolated from a desert soil sample from Lop Nur, Xinjiang, north-west China, and characterised using a polyphasic taxonomic approach. The strain exhibited antifungal activity against the following strains: Saccharomyces cerevisiae, Curvularia lunata, Aspergillus flavus, Aspergillus niger, Fusarium oxysporum, Penicillium citrinum, Candida albicans and Candida tropicalis; Antibacterial activity against Bacillus subtilis, Staphylococcus epidermidis and Micrococcus luteus; and no antibacterial activity against Escherichia coli. Phylogenetic analysis based on 16S rRNA gene sequences affiliated strain TRM 49605^T to the genus Streptomyces. Strain TRM 49605^T shows high sequence similarities to Streptomyces roseolilacinus NBRC 12815^T (98.62 %), Streptomyces flavovariabilis NRRL B-16367^T (98.45 %) and Streptomyces variegatus NRRL B-16380^T (98.45 %). Whole cell hydrolysates of strain TRM 49605^T were found to contain ll-diaminopimelic acid as the diagnostic diamino acid and galactose, glucose, xylose and mannose as the major whole cell sugars. The major fatty acids in strain TRM 49605^T were identified as iso C_16:0, anteiso C_15:0, C_16:0 and Summed Feature 5 as defined by MIDI. The main menaquinones were identified as MK-9(H₄), MK-9(H₆), MK-9(H₈) and MK-10(H₆). The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol and phosphatidylinositol mannoside. The G+C content of the genomic DNA was determined to be 71.2 %. The DNA–DNA relatedness between strain TRM 49605^T and the phylogenetically related strain S. roseolilacinus NBRC 12815^T was 60.12 ± 0.06 %, which is lower than the 70 % threshold value for delineation of genomic prokaryotic species. Based on the phenotypic, chemotaxonomic and phylogenetic data, strain TRM 49605^T (=CCTCC AA2015026^T = KCTC 39666^T) should be designated as the type strain of a novel species of the genus Streptomyces, for which the name Streptomyces luozhongensis sp. nov. is proposed.     

<Emphasis Type="Italic">Streptomyces caldifontis</Emphasis> sp. nov., isolated from a hot water spring of Tatta Pani,Kotli, Pakistan

A Gram-staining positive, non-motile, rod-shaped, catalase positive and oxidase negative bacterium, designated NCCP-1331^T, was isolated from a hot water spring soil collected from Tatta Pani, Kotli, Azad Jammu and Kashmir, Pakistan. The isolate grew at a temperature range of 18-40 °C (optimum 30 °C), pH 6.0–9.0 (optimum 7.0) and with 0–6 % NaCl (optimum 2 % NaCl (w/v)). The phylogenetic analysis based on 16S rRNA gene sequence revealed that strain NCCP-1331^T belonged to the genus Streptomyces and is closely related to Streptomyces brevispora BK160^T with 97.9 % nucleotide similarity, followed by Streptomyces drosdowiczii NRRL B-24297^T with 97.8 % nucleotide similarity. The DNA–DNA relatedness values of strain NCCP-1331^T with S. brevispora KACC 21093^T and S. drosdowiczii CBMAI 0498^T were 42.7 and 34.7 %, respectively. LL-DAP was detected as diagnostic amino acid along with alanine, glycine, leucine and glutamic acid. The isolate contained MK-9(H₈) as the predominant menaquinone. Major polar lipids detected in NCCP-1331^T were phosphatidylethanolamine, phosphatidylinositol and unidentified phospholipids. Major fatty acids were iso-C_{16: 0}, summed feature 8 (18:1 ω7c/18:1 ω6c), anteiso-C_15:0 and C_16:0. The genomic DNA G + C content was 69.8 mol %. On the basis of phylogenetic, phenotypic and chemotaxonomic analysis, it is concluded that strain NCCP-1331^T represents a novel species of the genus Streptomyces, for which the name Streptomyces caldifontis sp. nov. is proposed. The type strain is NCCP-1331^T (=KCTC 39537^T = CPCC 204147^T).     

<Emphasis Type="Italic">Algoriella xinjiangensis</Emphasis> gen. nov., sp. nov., a new psychrotolerant bacterium of the family <Emphasis Type="Italic">Flavobacteriaceae</Emphasis>

An aerobic, Gram-stain negative, non-spore-forming and psychrotolerant bacterium, designated strain XJ109^T, was isolated from a sewage water sample collected from Xinjiang Uigur Autonomous Region, China. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain XJ109^T represents a novel member of the family Flavobacteriaceae. The strain showed 95.5 % similarity with the 16S rRNA gene sequence of Empedobacter brevis LMG 4011^T, 95.4 % with Chishuiella changwenlii BY4^T, 95.3 % with Empedobacter falsenii NF 993^T and 92.3 % with Weeksella virosa DSM 16922^T. Strain XJ109^T showed the common phenotypic and chemotaxonomic characteristics of the family Flavobacteriaceae, containing menaquinone-6 (MK-6) as the predominant respiratory quinone and iso-C_17:0 3OH and iso-C_15:0 as the major fatty acids. The polar lipid profile consisted of phosphatidylethanolamine, one unidentified phospholipid and two unidentified lipids. The genomic DNA G+C content was 38.0 mol%. Strain XJ109^T was positive for catalase and oxidase activities, and it was observed to grow at 4–30 °C (optimal 16–20 °C), pH 6.5–10.0 (optimal 7.0–7.5) and in media containing 0–2.0 % (w/v) NaCl (optimal 0.5 %). On the basis of the polyphasic evidence presented, strain XJ109^T is considered to represent a novel genus and species of the family Flavobacteriaceae, for which the name Algoriella xinjiangensis gen. nov., sp. nov. is proposed. The type strain is XJ109^T (=CGMCC 1.10229^T=JCM 16590^T).     

<Emphasis Type="Italic">Deinococcus petrolearius</Emphasis> sp. nov. isolated from crude oil recovery water in China

A Gram-stain positive, non-motile, spherical, red-pigmented and facultatively anaerobic bacterium, designated strain 6.1^T, was isolated from a crude oil recovery water sample from the Huabei oil field in China. The novel strain exhibited tolerance of UV irradiation (> 1000 J m^?2). Based on 16S rRNA gene sequence comparisons, strain 6.1^T shows high similarity to Deinococcus citri DSM 24791^T (98.1%) and Deinococcus gobiensis I-0^T (97.8%), with less than 93.5% similarity to other closely related taxa. The major cellular fatty acids were identified as summed feature 3 (C_16:1 ω7c and/or iso-C_15:0 2-OH), followed by iso-C_17:1 ω9c and C_16:0. The polar lipid profile was found to contain phospholipids, glycolipids, phosphoglycolipids and aminophospholipids. The predominant respiratory quinone was identified as MK-8. The DNA G + C content was determined to be 68.3 mol %. DNA–DNA hybridization between strain 6.1^T and D. citri DSM 24791^T was 45.6 ± 7.1% and with D. gobiensis I-O^T was 36.6 ± 4.7%. On the basis of phylogenetic, chemotaxonomic and phenotypic data, we conclude strain 6.1^T represents a novel species of the genus Deinococcus, for which we propose the name Deinococcus petrolearius sp. nov. The type strain is 6.1^T (= CGMCC 1.15053^T = KCTC 33744^T).     

<Emphasis Type="Italic">Nonomuraea insulae</Emphasis> sp. nov., isolated from forest soil

Strain H2R21^T, a novel actinobacterium, isolated from a forest soil sample collected from Heybeliada, Istanbul, Turkey, and a polyphasic approach was used for characterisation of the strain. Chemotaxonomic and morphological characterisation of strain H2R21^T indicated that it belongs to the genus Nonomuraea. 16S rRNA gene sequence similarity showed that the strain is closely related to Nonomuraea purpurea 1SM4-01^T (99.1%) and Nonomuraea solani CGMCC 4.7037^T (98.4%). DNA–DNA relatedness values were found to be lower than 70% between the isolate and its phylogenetic neighbours N. purpurea 1SM4-01^T, N. solani CGMCC 4.7037^T and Nonomuraea rhizophila YIM 67092^T. The whole cell hydrolysates of strain H2R21^T were found to contain meso-diaminopimelic acid as the diagnostic diamino acid and glucose, madurose, mannose and ribose as the cell sugars. The polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylethanolamine, hydroxy-phosphatidylethanolamine, dihydroxy-phosphatidylethanolamine, phosphatidylinositol, glycophosphatidylinositol, two glycophospholipids and two unidentified lipids. The predominant menaquinones were identified as MK-9(H₄) and MK-9(H₆). The major fatty acids were found to be iso-C_16:0, iso-C_16:0 2OH and C_17:0 10-methyl. On the basis of DNA–DNA relatedness data and some phenotypic characteristics, it is evident that strain H2R21^T can be distinguished from the closely related species in the genus Nonomuraea. Thus, it is concluded that strain H2R21^T represents a novel species of the genus Nonomuraea, for which the name Nonomuraea insulae sp. nov. is proposed. The type strain is H2R21^T (= DSM 102915^T = CGMCC 4.7338^T = KCTC 39769^T).     

<Emphasis Type="Italic">Actinokineospora</Emphasis><Emphasis Type="Italic">mzabensis</Emphasis> sp. nov., a novel actinomycete isolated from Saharan soil

A novel actinomycete strain, designated PAL84, was isolated from a Saharan soil sample collected from Béni-Isguen, Ghardaïa (South of Algeria). This strain was studied for its taxonomic position using a polyphasic approach and was identified as a member of the genus Actinokineospora. Phylogenetic analysis showed that strain PAL84 had 16S rRNA gene sequence similarities with members of the genus Actinokineospora ranging from 96.2 % (Actinokineospora inagensis DSM 44258^T) to 97.8 % (Actinokineospora baliensis NBRC 104211^T). The strain was observed to produce pinkish-purple aerial mycelium and purplish red substrate mycelium, which fragmented readily into chains of non-motile elements. The optimum growth temperature and pH were found to be 25–30 °C and 5.0–7.0, respectively. The cell-wall hydrolysate of strain PAL84 was found to contain meso-diaminopimelic acid and the diagnostic whole-cell sugars were identified as arabinose and galactose. The predominant menaquinone was identified as MK-9 (H₄). The major fatty acids were found to be iso-C_16:0, iso-C_15:0, iso-C_16:1 H and iso-C_16:0 2OH. The diagnostic phospholipid detected was phosphatidylethanolamine. The genotypic and phenotypic data show that the strain represents a novel species of the genus Actinokineospora, for which the name Actinokineospora mzabensis sp. nov. is proposed, with the type strain PAL84^T (=DSM 45961^T = CECT 8578^T).     

<Emphasis Type="Italic">Maribacter marinus</Emphasis> sp. nov. isolated from a deep-sea seamount

A Gram-stain negative, rod-shaped, aerobic strain, designated YC973^T, was isolated from a seamount near the Yap Trench in the tropical western Pacific. Phylogenetic analysis based on its 16S rRNA gene sequence showed that strain YC973^T is related to the genus Maribacter and has high 16S rRNA gene sequence similarity to Maribacter orientalis KMM 3947^T (97.6%). The predominant cellular fatty acids were iso-C_15:0, iso-C_15:1 G and an unidentified fatty acid of equivalent chain-length 13.565. The polar lipid profile contained phosphatidylethanolamine and five unidentified lipids. The genomic DNA G+C content of strain YC973^T was 36.1 mol%. On the basis of the evidence presented in this study, strain YC973^T represents a novel species of the genus Maribacter, for which we propose the name Maribacter marinus sp. nov. (type strain YC973^T = KACC 19025^T = CGMCC 1.16328^T).     

<Emphasis Type="Italic">Streptomyces carminius</Emphasis> sp. nov., a novel actinomycete isolated from <Emphasis Type="Italic">Sophora alopecuroides</Emphasis> in Xinjiang,China

A novel actinobacterial strain, designated TRM SA0054^T, was isolated from the roots of Sophora alopecuroides grown in Alar, Xinjiang, north-west China, and characterised by a polyphasic taxonomic approach. Phylogenetic analysis showed that strain TRM SA0054^T has 16S rRNA gene sequence similarity of 98.22% with Streptomyces barkulensis RC 1831^T. Whole cell hydrolysates of strain TRM SA0054^T were found to contain ll-diaminopimelic acid as the diagnostic diamino acid and ribose, glucose and xylose as the major whole cell sugars. The major fatty acids were identified as iso-C_16:0, iso-C_16:1 G, anteiso-C_17:0, anteiso-C_15:0, C_16:0, anteiso-C_17:1 ω9c. The main menaquinones were determined to be MK-8 (H₄), MK-9 (H₆) and MK-9 (H₈). The polar lipids were identified as diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol, phosphatidylinositol mannoside and an unidentified lipid. The G?+?C content of the genomic DNA was determined to be 73.04%. Strain TRM SA0054^T has a relatively low DNA–DNA relatedness value with Streptomyces barkulensis RC 1831^T as determined by calculating the average nucleotide identity value (ANI?=?84.1%). Based on the phenotypic, chemotaxonomic and phylogenetic data, it is concluded that strain TRM SA0054^T should be designated as a novel species of the genus Streptomyces, for which the name Streptomyces carminius sp. nov. is proposed, with type strain TRM SA0054^T (=?CCTCC AA 2016041^T?=?KCTC39903^T).     

<Emphasis Type="Italic">Scopulibacillus cellulosilyticus</Emphasis> sp. nov., a cellulose-degrading bacterium isolated from tea

A Gram-stain positive, aerobic, non-motile, endospore-forming and rod-shaped strain (THG-NT9^T) was isolated from a green tea sample. Growth occurred at 20–45 °C (optimum 28–35 °C), at pH 6.0–8.0 (optimum 7.0) and at 0–2.0% NaCl (optimum 0%). Based on 16S rRNA gene sequence analysis, the near phylogenetic neighbours of strain THG-NT9^T were identified as Scopulibacillus daqui DSM 28236^T (98.6%), Scopulibacillus darangshiensis DSM 19377^T (97.4%), Pullulanibacillus pueri CGMCC 1.12777^T (96.7%) and Pullulanibacillus camelliae CGMCC 1.15371^T (96.3%). The DNA G?+?C content of strain THG-NT9^T was determined to be 47.5 mol %. DNA–DNA hybridization values between strain THG-NT9^T and S. daqui DSM 28236^T, S. darangshiensis DSM 19377^T, P. pueri CGMCC 1.12777^T, P. camelliae CGMCC 1.15371^T and Pullulanibacillus naganoensis DSM 10191^T were 41.3?±?0.1 (39.4?±?0.4% reciprocal analysis), 39.1?±?0.1 (37.3?±?0.1%), 21.4?±?0.7 (20.1?±?0.3%), 20.7?±?0.1 (20.1?±?0.4%) and 12.1?±?0.2% (8.3?±?0.2%). The polar lipids were identified as diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and three unidentified lipids. The quinone was identified as MK-7. The major fatty acids were C_18:3 ω7c, iso-C_15:0, iso-C_16:0, iso-C_17:0 and anteiso-C_17:0. The cell wall type was determined to be A1γ peptidoglycan with meso-diaminopimelic acid as the diagnostic diamino acid plus alanine and glutamic acid and glucose as the cell wall sugar. On the basis of the phylogenetic analysis, chemotaxonomic data, physiological characteristics, and DNA–DNA hybridization data, strain THG-NT9^T represents a novel species of the genus Scopulibacillus, for which the name Scopulibacillus cellulosilyticus sp. nov. is proposed. The type strain is THG-NT9^T (=?KCTC 33918^T?=?CGMCC 1.16305^T).     

<Emphasis Type="Italic">Flavobacterium ureilyticum</Emphasis> sp. nov., a novel urea hydrolysing bacterium isolated from stream bank soil

A novel bacterium designated S-42^T was isolated from stream bank soil. Cells were found to be aerobic, Gram staining-negative, oxidase-positive, catalase-negative, non-motile, non-spore-forming, rod-shaped, and yellow-pigmented. The strain can grow at 15–35 °C, pH 6.0–10.0, and at 0.5% (w/v) NaCl concentration. Urea was hydrolysed. Flexirubin-type pigments were absent. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain S-42^T formed a lineage within the family Flavobacteriaceae of the phylum Bacteroidetes that is distinct from various species of the genus Flavobacterium, including Flavobacterium maotaiense T9^T (97.6% sequence similarity), Flavobacterium hibernum ATCC 51468^T (97.4%), and Flavobacterium granuli Kw05^T (97.1%). The 16S rRNA gene sequences identity between strain S-42^T and other members of the genus Flavobacterium were < 97.0%. Strain S-42^T contains MK-6 as sole respiratory quinone. The major polar lipids were identified as phosphatidylethanolamine and an unidentified aminolipid. The major cellular fatty acids were identified as iso-C_15:0, summed feature 3 (C_16:1ω7c and/or C_{16: 1}ω6c), C_16:0, anteiso-C_15:0, iso-C_17:0 3-OH, iso-C_15:0 3-OH, and iso-C_15:1 G. The DNA G?+?C content of the strain was 35.8 mol%. The polyphasic characterization indicated that strain S-42^T represents a novel species of the genus Flavobacterium, for which the name Flavobacterium ureilyticum sp. nov. is proposed. The type strain is S-42^T (=?KEMB 9005-537^T?=?KACC 19115^T?=?NBRC 112683^T).     

<Emphasis Type="Italic">Chitinophaga salinisoli</Emphasis> sp. nov., isolated from saline soil

A novel aerobic bacterium, designated strain LAM9153^T, was isolated from a saline soil sample collected from Lingxian County, Shandong Province, China. Cells of strain LAM9153^T were observed to be Gram-stain negative, non-motile, non-spore-forming and rod-shaped. The new isolate grew optimally at 30–35 °C, pH 7.0 and 0.5% of NaCl concentration (w/v). According to the phylogenetic analysis based on the 16S rRNA gene sequence, strain LAM9153^T shares high similarity with Chitinophaga terrae Gsoil 238^T (96.9%) and Chitinophaga niabensis JS 13-10^T (95.9%), forming a subcluster with C. terrae Gsoil 238^T, Chitinophaga cymbidii R156-2^T, C. niabensis JS 13-10^T and Chitinophaga soli Gsoil 219^T in the phylogenetic tree. The major cellular fatty acids (> 10%) were identified as iso-C_15:0, iso-C_17:0 3-OH and summed features 3 (C_16:1 ω6c and/or C_16:1 ω7c). The predominant respiratory quinone was identified as menaquinone MK-7. The polar lipids consisted of phosphatidylethanolamine, aminophospholipid, three unidentified aminolipids and five unidentified lipids. The genomic DNA G+C content was determined to be 53.2 ± 1.6 mol%. On the basis of phylogenetic, chemotaxonomic and phenotypic data, strain LAM9153^T is concluded to represent a novel species of the genus Chitinophaga, for which the name Chitinophaga salinisoli sp. nov. is proposed. The type strain is LAM9153^T (= ACCC 19960^T = JCM 30847^T).     

<Emphasis Type="Italic">Streptomyces tunisialbus</Emphasis> sp. nov., a novel <Emphasis Type="Italic">Streptomyces</Emphasis> species with antimicrobial activity

A novel actinomycete strain designated S2^T was isolated from Tunisian rhizosphere soil of Lavandula officinalis. This isolate exhibited broad spectrum antibacterial activity against several Gram-positive and Gram-negative bacteria and also antifungal activity against yeast and filamentous fungi. The isolate S2^T presents morphological and chemotaxonomic characteristics typical of the members of the genus Streptomyces. Whole cell hydrolysates of S2^T were found to contain LL-diaminopimelic acid. The major fatty acids were identified as C16:0, anteiso-C15:0 and iso-C16:0 whereas the predominant menaquinones were found to be MK-9(H6) and MK-9(H8). The polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannoside and three unidentified compounds. The G+C content of the genomic DNA was determined to be 71.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain S2^T belongs to the genus Streptomyces and is closely related to Streptomyces netropsis DSM 40259^T with 99.86% sequence similarity. Multi-locus sequence analysis (MLSA) based on four house-keeping gene alleles (gyrB, recA, trpB, rpoB) showed that isolate S2^T is closely related to S. netropsis, with an MLSA distance greater than 0.007. The DNA–DNA relatedness between strain S2^T and its near phylogenetic neighbour was 63.6 ± 2.3%, which is lower than the 70% threshold value for delineation of genomic prokaryotic species. This isolate was also distinguished from the type strain S. netropsis DSM 40259^T, using a combination of morphological and physiological features. Based on its phenotypic and molecular properties, strain S2^T is considered to represent a novel species of the genus Streptomyces, for which the name Streptomyces tunisialbus sp. nov. is proposed. The type strain is S2^T (= JCM 32165^T = DSM 105760^T).     

<Emphasis Type="Italic">Nocardia zhihengii</Emphasis> sp. nov., an actinobacterium isolated from rhizosphere soil of <Emphasis Type="Italic">Psammosilene tunicoides</Emphasis>

A Nocardia-like actinobacterial strain, designated YIM TG2190^T, was isolated from rhizosphere soil of Psammosilene tunicoides collected from Gejiu, Yunnan province, China. The cells of strain YIM TG2190^T were observed to be Gram-stain positive and non-motile. The strain forms extensively branched substrate mycelia that fragments into rod-shaped elements. The 16S rRNA gene sequence analysis showed that strain YIM TG2190^T is closely related to Nocardia nova (97.5%), Nocardia jiangxiensis (97.1%) and Nocardia miyunensis (96.8%). Growth occurs at 4–30?°C (optimum 28?°C), pH 6.0–8.0 (optimum pH 7.0) and the strain can tolerate NaCl (w/v) up to 3% (optimum 0–1%). The cell walls were found to contain meso-diaminopimelic acid. The whole-cell sugars were identified as glucose, mannose, ribose, galactose, arabinose and fucose. The polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol mannosides, phosphatidylglycerol and an unidentified phospholipid. The menaquinones detected were MK-9 (H₂) and MK-8 (H₄). The major fatty acids (>?5%) were found to be C_16:0 (33.9%), summed feature 3 (21.7%), C_18:0 10-methyl TBSA (13.7%) and C_18:1ω9c (7.0%). The DNA G+C content was determined to be 61.1 mol%. DNA-DNA relatedness between the strain YIM TG2190^T and N. nova CGMCC 4.1705^T, N. jiangxiensis CGMCC 4.1905^T and N. miyunensis CGMCC 4.1904^T were 46.9?±?2.6, 36.8?±?1.3, and 35.7?±?2.6%, respectively, values which are less than the threshold value (70%) for the delineation of prokaryotic genomic species. The phenotypic, chemotaxonomic and phylogenetic data indicates that strain YIM TG2190^T represents a novel species of the genus Nocardia, for which the name Nocardia zhihengii sp. nov. is proposed. The type strain is YIM TG2190^T (=KCTC 39596^T?=?DSM 100515^T).     

<Emphasis Type="Italic">Myceligenerans salitolerans</Emphasis> sp. nov., a halotolerant actinomycete isolated from a salt lake in Xinjiang,China

A halotolerant actinomycete strain, designated XHU 5031^T, was isolated from a salt lake in Xinjiang Province, northwest China. Its taxonomic status was determined using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the organism was most closely related to Myceligenerans xiligouense DSM 15700^T (98.4 %), Myceligenerans halotolerans XJEEM 11063^T (98.0 %) and Myceligenerans crystallogenes DSM 17134^T (97.5 %). However, it had relatively low values for DNA–DNA relatedness with the above strains (46.2, 39.4 and 36.5 %, respectively). The peptidoglycan type was A4α. This organism contained glucose, mannose and galactose as the major whole cell sugars. The predominant menaquinone was MK-9(H₄). The major fatty acids were iso-C_15:0, anteiso-C_15:0 and iso-C_16:0. The polar lipids detected were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylinositol (PI), one unknown phospholipid (PL) and two unknown glycolipids (GL). The G+C content of genomic DNA was 71.2 mol %. Phenotypic data clearly distinguished the isolate from its closest relatives. The combined genotypic and phenotypic data indicated that the isolate XHU 5031^T represented a novel species of the genus Myceligenerans. The proposed name for this organism is Myceligenerans salitolerans sp. nov., with type strain XHU 5031^T (=KCTC 29128^T = CCTCC AB 2012908^T).     

Description of <Emphasis Type="Italic">Geodermatophilus bullaregiensis</Emphasis> sp. nov.

The taxonomic position of an aerobic actinobacterial strain, BMG841^T, isolated from the Bulla Regia monument (Tunisia) and exhibiting a high resistance to gamma-radiation (D10 ~9 kGy) was determined using polyphasic approach. The optimal growth range was found to be 25–35 °C at pH of 7.0–8.5. The strain was observed to form black dry colonies. Chemotaxonomic characteristics of the isolate showed a cell wall type III, with galactose and glucose as diagnostic sugars; phosphatidylcholine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid as main polar lipids; and MK-9(H₄) as the predominant menaquinone. The major cellular fatty acids were identified as iso-C_16:0 and iso-C_15:0. Phylogenetic analysis indicated that strain BMG841^T represents a novel member of the genus Geodermatophilus with high 16S rRNA gene sequence identity with Geodermatophilus saharensis (98.28 %). Based on phylogenetic and phenotypic analysis, strain BMG841^T is proposed as the type strain (=DSM 46841^T = CECT 8821^T) of a novel species, Geodermatophilus bullaregiensis.     

<Emphasis Type="Italic">Verrucosispora rhizosphaerae</Emphasis> sp. nov., isolated from mangrove rhizosphere soil

An actinomycete strain, 2603PH03^T, was isolated from a mangrove rhizosphere soil sample collected in Wenchang, China. Phylogenetic analysis of the 16S rRNA gene sequence of strain 2603PH03^T indicated high similarity to Verrucosispora gifthornensis DSM 44337^T (99.4%), Verrucosispora andamanensis (99.4%), Verrucosispora fiedleri MG-37^T (99.4%) and Verrucosispora maris AB18-032^T (99.4%). The cell wall was found to contain meso-diaminopimelic acid and glycine. The major menaquinones were identified as MK-9(H₄), MK-9(H₆) and MK-9(H₈), with MK-9(H₂), MK-10(H₂), MK-9(H₁₀) and MK-10(H₆) as minor components. The characteristic whole cell sugars were found to be xylose and mannose. The phospholipid profile was found to contain phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylinositol, phosphatidylserine and an unidentified phospholipid. The DNA G+C content was determined to be 70.1 mol%. The results of physiological and biochemical tests and low DNA-DNA relatedness readily distinguished the isolate from the closely related species. On the basis of these phenotypic and genotypic data, strain 2603PH03^T is concluded to represent a novel species of the genus Verrucosispora, for which the name Verrucosispora rhizosphaerae sp. nov. is proposed. The type strain is 2603PH03^T (=CCTCC AA 2016023^T = DSM 45673^T).