Mobilisation of storage reserves during germination and early seedling growth of sugar beet

The principal storage reserve of sugar beet seeds is starch, which is localised in the perisperm. Additional storage reserves include the seed proteins, albumins, globulins and glutclins, which are exclusively located in the embryo. Soluble sugars are also detectable in all the organs of the mature seed. The time-course of reserve mobilisation in the different organs of the sugar beet ( Beta vulgaris L. cv. Regina) seed during germination and early seedling growth is documented, with particular reference to changes in (a) activities of hydrolases: a-amylase, β-amylase, and α-glucosidases; (b) levels of carbohydrates and (c) proteins. Amylase activities increase substantially in both cotyledons, as well as the perisperm, whereas the increase in α-glucosidase activities is largely confined to the perisperm.     

Sucrose translocation and storage in the sugar beet

Several physiological processes were studied during sugar beet root development to determine the cellular events that are temporally correlated with sucrose storage. The prestorage stage was characterized by a marked increase in root fresh weight and a low sucrose to glucose ratio. Carbon derived from ¹⁴C-sucrose accumulation was partitioned into protein and structural carbohydrate fractions and their amino acid, organic acid, and hexose precursors. The immature root contained high soluble acid invertase activity (V_max 20 micromoles per hour per milligram protein; K_m 2 to 3 millimolar) which disappeared prior to sucrose storage. Sucrose storage was characterized by carbon derived from ¹⁴C-sucrose uptake being partitioned into the sucrose fraction with little evidence of further metabolism. The onset of storage was accompanied by the appearance of sucrose synthetase activity (V_max 12 micromoles per hour per milligram protein; K_m 7 millimolar). Neither sucrose phosphate synthetase nor alkaline invertase activities were detected during beet development. Intact sugar beet plants (containing a 100-gram beet) exported 70% of the translocate to the beet, greater than 90% of which was retained as sucrose with little subsequent conversions.     

Isoenzyme markers in varietal identification of banana

Summary Salt-soluble polypeptide and a few isozymes were profiled to identify banana cultivars available in Andamans, India. Salt-soluble polypeptide profile was found to be inappropriate in cultivar identification However, isozymes such as peroxidase could differentiate ‘Jungli kela’, ‘Tissue Cultured Dwarf Cavendish’ (TCDC), ‘Lal kela’, ‘Rajbel’, and ‘Baratang wild’, while esterase identified all the cultivars except ‘Rajbel’ and ‘Tarkari kela’. The latter two cultivars could be identified with the use of malate dehydrogenase (MDH) and peroxidase profiles, MDH portrayed cultivar-specific distinct banding pattern in ‘Khatta Champa’, ‘Tarkari kela’, and ‘Baratang wild’, ‘China kela’ could be identified easily by superoxide dismutase (SOD). Amongst four isozymes, esterase was found to be most efficient in identifying eight cultivars amongst 10; bence this isozyme may be used often as a marker for cultivar identification of banana.     

Effect of heavy metals on nitrate and protein metabolism in sugar beet

Nitrate content, activities of nitrate reductase and glutamine synthetase, soluble protein content, and proportion of ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBPCO) protein in total proteins were measured in leaves of Beta vulgaris L. plants affected by nickel, cadmium, and molybdenum in concentrations of 10^-4, 10^-2, and 1 mM. The most harmful effect on the above mentioned parameters had Cd, less harmful Ni, whereas Mo stimulated the investigated parameters. The proportion of RuBPCO protein showed a high tolerance to heavy metals. This revised version was published online in July 2006 with corrections to the Cover Date.     

Isozymes and classification of Asian rice varieties

Summary Enzyme variation detected by starch gel electrophoresis was used to investigate the genetic structure of Oryza sativa L. species. Fifteen polymorphic loci coding for 8 enzymes were surveyed among 1688 traditional rices from Asia. Multivariate analysis of the data resulted in identification of six varietal groups, with two major ones, groups I and VI, two minor ones, groups II and V, and two satellite ones, groups III and IV. Group I is found throughout tropical Asia; it encompasses most Aman rices in Bangladesh, the Tjereh rices in Indonesia and the Hsien rices in China. Group VI is found mostly in temperate regions and in high elevation areas in the tropics; it encompasses most upland rices from Southeast Asia, the Bulu rices from Indonesia and the Keng rices from China. Groups II, III, IV and V share common differences from groups I and VI which suggest an alternative evolutionary history. Groups II and V are found in the Indian subcontinent from Iran to Burma. Well-known components of these are Aus rices from Bangladesh for group II and Basmati rices from Pakistan and India for group V. Groups III and IV are restricted to some deepwater rices in Bangladesh and Northeast India. Based on analogy with other classifications, Group I might be considered as the Indica type and Group VI as the Japonica type. Such terms, however, have a depreciated meaning due to discrepancies among various classifications.Joint contribution: Institut de Recherches Agronomiques Tropicales et des Cultures Vivrières, 45 bis avenue de la Belle Gabrielle, F-94736 Nogent Sur Marne Cedex, France, and International Rice Research Institute P.O. Box 933, Manila, Philippines     

Apoplastic mobility of sucrose in storage parenchyma of sugar beet

The apoplastic movement of sucrose through storage parenchyma discs (2.4 mm thick) from roots of sugar beet ( Beta vulgaris var. altissima ) was investigated in order to evaluate the suitability of the apoplast for transcellular sugar transport. The sucrose permeability of the discs (P = 5.7 × 10⁻⁸ cm s⁻¹ at 25°C) was more than two orders of magnitude lower than that of an equally thick layer of unstirred water. This is due to the small volume fraction of free space (3.1%) and the decreased diffusion coefficient D of sucrose in the cell walls. The effective diffusion coefficient of the apoplast (6 to 9 × 10⁻⁷ cm² s⁻¹ at 25°C) was determined independently of the cross sectional area of free space by treating the time course of fluxes according to Fick's second law. The high diffusion resistance of the apoplast has to be considered in models of native parenchyma transport.     

Radial and axial water transport in the sugar beet storage root

To evaluate the contribution of transcellular, apoplastic and symplastic pathways to water movements, horizontal (axial pathway) and vertical (radial pathway) sugar beet root (Beta vulgaris L.) slices were studied. Volume flows (Jv) were measured under hydrostatic and/or osmotic gradients, using a computer-based data-acquisition system. When tissues were tested under hydrostatic gradients (0.3 MPa m^-1) a much more important permeability was observed in the axial pathway, as compared with the radial one. Negative pressure gradients (tensions) were as effective as positive ones in inducing a net water movement. After the establishment of a concentration gradient in the radial pathway (obtained by adding 300 M m^-3 mannitol to the employed solution) an osmotic flux, sensitive to HgCI2, was observed. The inhibitory effect of mercurial compounds was reversed by -mercaptoethanol while [¹⁴C] mannitol unidirectional fluxes were not affected by mercurial agents. In the axial pathway, the presence of a mannitol gradient did not develop a sustained osmotic flux. After an initial Jv in the expected direction, the Jv reversed and moved in the opposite way. It is concluded that, in the sugar beet root, water channels play a significant role in water transfers in the radial pathway. On the other side, water and solutes are transported by a hydrostatic gradient in the xylem vessels. In general, these results extend and adapt to a storage root the 'composite transport model' first proposed by Steudle et al.     

The growth and development of the storage root of sugar beet

A study was made of the growth of the storage root of sugar beet as a sugar accumulating organ. The storage root grew by simultaneous cell multiplication and expansion from a series of peripheral secondary meristems laid down during the early stages of development. The weight of water and of non-sugar dry matter per cell increased in proportion to the increase in cell volume. The amount of sugar per cell was proportional to cell volume only during the initial stage of cell expansion up to volumes of about 15 times 10^-8 cm³; thereafter it was less proportional. Thus, average cell size is a major determinant of the sugar concentration of the storage root. The implications of this are discussed.     

Genetical control and linkage relationships of isozyme markers in sugar beet (B. vulgaris L.)

Summary Five isozyme systems were genetically investigated. The different separation techniques, the developmental expression and the use as marker system in sugar beet genetics and breeding is discussed. Isocitrate dehydrogenase was controlled by two genes. The gene products form inter- as well as intralocus dimers, even with the gene products of the Icd gene in B. procumbens and B. patellaris. Adenylate kinase was controlled by one gene. Three different allelic forms were detected, which were active as monomeric proteins. Glucose phosphate isomerase showed two zones of activity. One zone was polymorphic. Three allelic variants, active as dimers, were found. Phosphoglucomutase also showed two major zones of activity. One zone was polymorphic and coded for monomeric enzymes. Two allelic forms were found in the accessions studied. The cathodal peroxidase system was controlled by two independent genes, of which only one was polymorphic. The gene products are active as monomers. Linkage was found between red hypocotyl color (R) and Icd ₂. Pgm ₁, Gpi ₂, Ak ₁ and the Icd ₂-R linkage group segregated independently.     

Genetic linkage between cytological markers and the seed storage protein lociSec2[Gli-R2] andSec3[Glu-R1] in rye

In order to reach a higher accuracy concerning the cytological locations of the rye seed storage protein lociSec2[Gli-R2] andSec3[Glu-R1] located within chromosome arms 2RS and 1RL, respectively, the linkage relationships between the following loci were analyzed: isozyme lociGpi-R1,Mdh-R1, andPgd2, translocationT273W (Wageningen tester set, involving chromosome arms 1RS and 5RL), the telomere C-bands of chromosome arms 1RL (tL1), 2RS (tS2), and 5RS (tS5), and three interstitial C-bands in chromosome arm 1RS (iS1), in the middle of chromosome arm 1RL (iL1), and in the middle of chromosome arm 2RL (iL2), respectively. The data indicated that locusSec3 is located in the distal half of chromosome arm 1RL (between C-bandiL1 and locusPgd2), while locusSec2 is located a short distance (2.9 ± 1.4%) from the telomere C-band of chromosome arm 2RS.     

Effects of ensilage on storage and enzymatic degradability of sugar beet pulp

Ensiling was investigated for the long-term storage of Sugar Beet Pulp (SBP). Eight strains of lactic acid bacteria (LAB) and a non-inoculated control were screened based on their ability to rapidly reduce pH, produce a large amount of lactic acid and inhibit undesirable fermentations. Lactobacillus brevis B-1836 (LAB #120), Lactobacillus fermentum NRRL B-4524 (LAB #137) and a non-inoculated control were selected for further research to determine the effects of LAB inoculation level and packing density on SBP silage quality and sugar yield upon enzymatic hydrolysis. Both SBP preservation and prevention of cellulose and hemicellulose loss were better when SBP was treated with LAB #137 compared to LAB #120 and the non-inoculated control. Additionally, the ensiling process was found to significantly improve the enzymatic digestibility of SBP by as much as 35%. The results suggest that ensiling may be a promising technology for SBP stabilization and pretreatment for bioconversion to products.     

Genetic variation in the subunits of globulin-1 storage protein of French bean

Summary Charge and molecular weight heterogeneity of globulin-1 (G1) polypeptides of the bean, Phaseolus vulgaris L., were revealed by sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE). Different bean cultivars were classified into three groups: Tendergreen, Sanilac, and Contender on the basis of their protein subunit composition. Nine distinct major bands: 51,49, 48.5,48^T, 48^S, 47, 45.5, 45^S, and 45^C, and two minor bands: 46^T and 46^S were found to account for the three profiles seen on one-dimensional SDS-PAGE. Two-dimensional analysis revealed these eleven protein bands to be composed of a minimum of fourteen distinct protein subunits. The Tendergreen and Sanilac types differ in their G1 polypeptide composition. The protein patterns of the Contender types are intermediate, containing many protein subunits found in the patterns of the Tendergreen and Sanilac types suggesting a genetic and evolutionary relationship.     

Phenotypic polymorphism and allele differentiation of isozymes in fodder beet,multigerm sugar beet and monogerm sugar beet

Summary Thirteen enzymes (MDH, SDH, LAP, PGM, PX, IDH, GPI, 6PGD, APH, GOT, GDH, ME and SOD) of 3 cultivated beet (B. vulgaris L.) gene pools, comprising 12 accessions of fodder beet, 11 of old multigerm sugar beet and 10 of modern monogerm sugar beet, were investigated using horizontal starch gel electrophoresis. Eleven accessions of primitive or wild B. vulgaris were also included for the comparison of isozymes. Variation in isozyme phenotypes was investigated to detect diversity in the three cultivated forms of beet. Phenotypic variation was observed in all except ME and SOD, which were monomorphic. A high degree of phenotypic polymorphism (Pj) was found in GDH, PGM, IDH, APH and MDH. Differences in phenotypic polymorphism in MDH, GPI and PX were recognized between fodder beet and both sugar beet groups. Average polymorphism for 13 enzymes in both sugar beets was significantly higher than that in fodder beet. For 13 enzymes, the existence of high isozyme diversity in both sugar beet gene pools was revealed. Allele frequencies in 13 alleles of five enzyme-coding loci, Lap, Px-1, Aph-1, Got-2 and Gdh-2, were investigated. New alleles, Px-1 ¹ and Got-2 ¹, were found in fodder beet accessions. No significant differences of average allele frequencies of five loci between fodder beet and both sugar beets were recognized. Several unique alleles and different isozyme phenotypes were observed in the accessions of B. vulgaris ssp. macrocarpa and ssp. adanensis. Future utilization of cultivated beet gene pools for sugar beet breeding is discussed from the viewpoint of genetic resources.     

Saccharification and protein enrichment of sugar beet pulp byPleurotus florida

Summary Pleurotus florida was grown in submerged culture with different concentrations of sugar beet pulp with a view to its nutritional upgrading. Micelial growth, protein enrichment and dry weight loss of the solid residues of cultures, as well as the evolution of reducing sugars in the liquid medium, were followed for 14 days. A product with 45% (w/w) protein and a saccharification extent as high as 35% (w/w) were obtained after 7 days with 1% (w/v) sugar beet pulp.     

Simultaneous saccharification and protein enrichment fermentation of sugar beet pulp

Summary A product with 40 % protein content was obtained from sugar beet pulp (1.25–2.0 mm) in 48 h one stage (simultaneous) saccharification/fermentation process under optimized conditions using a specific enzyme mixture andCandida tropicalis strain, also saving about 40 % enzymes in comparison to a 2-stage process.     

Influence of phloem transport, N-fertilization and ion accumulation on sucrose storage in the taproots of fodder beet and sugar beet

To investigate the factors governing the accumulation of sucroseand amino acids in the taproots of sugar beet, their contentswere measured in the leaves, phloem sap and the taproots ofsugar beet, fodder beet and a hybrid between both, grown oneither 3.0 or 0.5 mM nitrate. In the taproots the contents ofmalate, citrate and inorganic ions were also determined. Forthe high sucrose accumulation in sugar beet as compared to theother varieties three factors were found. (a) In sugar beet,less amino acids and more sucrose are taken up into the phloemthan in fodder beet. (b) In sugar beet, the sucrose and aminoacid syntheses are less sensitive to the nitrate concentrationsthat are required for optimal plant growth than in other varieties.In fodder beet, upon raising the nitrate concentration from0.5 mM to 3 mM, the synthesis and storage of sucrose is decreasedand that of amino acids increased. The corresponding valuesin sugar beet (0.5 mM) are similar to those in fodder beet andare not much affected by an increase of nitrate. (c) The sucroseaccumulation is limited by the accumulation of inorganic ionsin the taproots. The sucrose content in the taproots is negativelycorrelated to the total ion content. Whereas sucrose representstwo-third of all solutes in the taproots of sugar beet, it amountsto only one-third of the solutes in fodder beet taproots. Key words: Amino acids, Beta vulgans L, phloem sap, potassium, sucrose storage, sugar beet, taproots, transport     

Characterization of olive seed storage proteins

At present little is known about olive seed storage proteins (SSPs). A better understanding of olive SSPs will be important for future biotechnology efforts. In the present study, we first developed a protocol relied on chloroform for preparing protein samples free of lipids from lipid-rich olive seeds. Then, we characterized olive SSPs by SDS-PAGE, N-terminal sequencing and immunoblot. Two smaller subunits (20 and 21.5 kD) of SSPs were purified to homogeneity and used for antibody production or N-terminal sequencing. N-terminal sequencing confirmed that major olive SSPs are 11S globulins. Moreover, the components and size distribution of SSPs are identical among several olive cultivars examined, suggesting that their synthesis is highly conserved in this species. Olive SSPs are soluble in aqueous alcohol, with limited solubility in water and dilute salt. Thus, despite their homology with globulins, olive SSPs are similar in solubility to prolamins and different from globulins in other dicot plants. Finally, the accumulation of olive SSPs during fruit maturation was examined. Our results revealed that the accumulation of SSPs is time-dependent and tissue-specific, and only 105 days after pollination (DAP), did individual components of SSPs synthesize substantially, and accumulate rapidly in large quantities over a short period of time. Our results suggest that a 36 kD protein is the precursor of olive SSPs, and 90–105 DAP seems to be a crucial transition period (from a precursor to mature subunits) for the accumulation of SSPs.     

The application of whole-cell protein electrophoresis for the classification and identification of basidiomycetous yeast species

The relationships among 65 basidiomycetous yeast strains were determined by one-dimensional electrophoresis of SDS-solubilized whole-cell proteins. Protein profiles were compared by the Pearson product moment correlation coefficient (r). The strains investigated represented species from the generaCystofilobasidium, Filobasidium, Filobasidiella, Kondoa, Leucosporidium, Mrakia andRhodosporidium. Except for the genusMrakia, all species constituted separate protein electrophoretic clusters. The species of the genusMrakia (M. frigida, M. gelida, M. nivalis andM. stokesii) show highly similar protein patterns, suggesting that these four species may be synonymous. Strains of two varieties ofFilobasidiella neoformans, F. neoformans var.neoformans andF. neoformans var.bacillispora, could not be differentiated by protein electrophoresis.For the delineation of the protein electrophoretic clusters of the yeasts studied, literature data relying on other criteria, such as DNA base composition, carbon source utilization patterns, enzymatic protein electrophoregrams, ubiquinone systems, DNA-DNA homology and rRNA sequence data were used. It was demonstrated that a database of SDS-protein patterns provides a valuable tool for the identification of yeasts.     

Protein array staining methods for undefined protein content, manufacturing quality control, and performance validation

Methods to assess the quality and performance of protein microarrays fabricated from undefined protein content are required to elucidate slide-to-slide variability and interpolate resulting signal intensity values after an interaction assay. We therefore developed several simple total- and posttranslational modification-specific, on-chip staining methods to quantitatively assess the quality of gel element protein arrays manufactured with whole-cell lysate in vitro protein fractions derived from two-dimensional liquid-phase fractionation (PF2D) technology. A linear dynamic range of at least 3 logs was observed for protein stains and immobilized protein content, with a lower limit of detection at 8 pg of protein per gel element with Deep Purple protein stain and a field-portable microarray imager. Data demonstrate the successful isolation, separation, transfer, and immobilization of putative transmembrane proteins from Yersinia pestis KIM D27 with the combined PF2D and gel element array method. Internal bovine serum albumin standard curves provided a method to assess on-chip PF2D transfer and quantify total protein immobilized per gel element. The basic PF2D array fabrication and quality assurance/quality control methods described here therefore provide a standard operating procedure and basis for developing whole-proteome arrays for interrogating host-pathogen interactions, independent of sequenced genomes, affinity tags, or a priori knowledge of target cell composition.