ARE GREENBEARDS INTRAGENOMIC OUTLAWS?

Greenbeard genes identify copies of themselves in other individuals and cause their bearer to behave nepotistically toward those individuals. Hence, they can be favored by kin selection, irrespective of the degree of genealogical relationship between social partners. Although greenbeards were initially developed as a thought experiment, a number of recent discoveries of greenbeard alleles in real populations have led to a resurgence of interest in their evolutionary dynamics and consequences. One issue over which there has been disagreement is whether greenbeards lead to intragenomic conflict. Here, to clarify the "outlaw" status of greenbeards, we develop population genetic models that formally examine selection of greenbeard phenotypes under the control of different loci. We find that, in many cases, greenbeards are not outlaws because selection for or against the greenbeard phenotype is the same across all loci. In contrast, when social interactions are between genealogical kin, we find that greenbeards can be outlaws because different genes can be selected in different directions. Hence, the outlaw status of greenbeard genes crucially depends upon the particular biological details. We also clarify whether greenbeards are favored due to direct or indirect fitness effects and address the relationship of the greenbeard effect to sexual antagonism and reciprocity.     

The effect of cheats on siderophore diversity in Pseudomonas aeruginosa

Cooperation can be maintained if cooperative behaviours are preferentially directed towards other cooperative individuals. Tag‐based cooperation (greenbeards) – where cooperation benefits individuals with the same tag as the actor – is one way to achieve this. Tag‐based cooperation can be exploited by individuals who maintain the specific tag but do not cooperate, and selection to escape this exploitation can result in the evolution of tag diversity. We tested key predictions crucial for the evolution of cheat‐mediated tag diversity using the production of iron‐scavenging pyoverdine by the opportunistic pathogen, Pseduomonas aeruginosa as a model system. Using two strains that produce different pyoverdine types and their respective cheats, we show that cheats outcompete their homologous pyoverdine producer, but are outcompeted by the heterologous producer in well‐mixed environments. As a consequence, co‐inoculating two types of pyoverdine producer and one type of pyoverdine cheat resulted in the pyoverdine type whose cheat was not present having a large fitness advantage. Theory suggests that in such interactions, cheats can maintain tag diversity in spatially structured environments, but that tag‐based cooperation will be lost in well‐mixed populations, regardless of tag diversity. We saw that when all pyoverdine producers and cheats were co‐inoculated in well‐mixed environments, both types of pyoverdine producers were outcompeted, whereas spatial structure (agar plates and compost microcosms), rather than maintaining diversity, resulted in the domination of one pyoverdine producer. These results suggest cheats may play a more limited role in the evolution of pyoverdine diversity than predicted.     

Multicoloured greenbeards,bacteriocin diversity and the rock‐paper‐scissors game

Greenbeard genes identify copies of themselves in other individuals and cause their bearer to behave nepotistically towards those individuals. Bacterial toxins (bacteriocins) exemplify the greenbeard effect because producer strains carry closely linked genes for immunity, such that toxicity is limited to nonproducer strains. Bacteriocin producers can be maintained in a dynamic polymorphism, known as rock‐paper‐scissors (RPS) dynamics, with immune and susceptible strains. However, it is unclear whether and how such dynamics will be maintained in the presence of multiple toxin types (multiple beard ‘colours’). Here, we analyse strain dynamics using models of recurrent patch colonization and population growth. We find that (i) polymorphism is promoted by a small number of founding lineages per patch, strong local resource competition and the occurrence of mutations; (ii) polymorphism can be static or dynamic, depending on the intensity of local interactions and the costs of toxins and immunity; (iii) the occurrence of multiple toxins can promote RPS dynamics; and (iv) strain diversity can be maintained even when toxins differ in toxicity or lineages can exhibit multitoxicity/multi‐immunity. Overall, the factors that maintain simple RPS dynamics can also promote the coexistence of multiple toxin types (multiple beard colours), thus helping to explain the remarkable levels of bacteriocin diversity in nature. More generally, we contrast these results with the maintenance of marker diversity in genetic kin recognition.     

Butterfly species differing in mobility show different structures of dispersal‐related syndromes in the same fragmented landscape

Mobility varies strongly between and within species, reflecting different dispersal strategies. Within species, such differences can imply suites of traits associated in syndromes. Different syndrome structures have been found within species among populations differing in the selective pressures they are exposed to. Similarly, we expect species differing in mobility to show different syndrome structures in response to similar selective pressures such as landscape fragmentation. Using butterflies originating from the same fragmented landscape, we investigated the differences in mobility syndrome between four common butterflies (Pyronia tithonus, Pararge aegeria Maniola jurtina, Pieris rapae) known to differ in their mobility. We expected individuals from the less mobile species to display a resident strategy because of high dispersal cost in this fragmented landscape, and individuals from the more mobile species to display a larger range of movement strategies. Moreover, as syndromes can only be detected whenever individuals differ in their dispersal strategies, we expected mobility syndromes to be observable only in populations where dispersal polymorphism is maintained. We thus expected stronger correlations between mobility‐related traits in more mobile species. Using three mobility tests in controlled conditions designed to measure different components of mobility, we showed that mobility‐related traits were indeed correlated only in the most mobile species. The absence of correlation in the less mobile species may be explained by a low variation in movement strategies, dispersal being counter‐selected.     

Robust Prediction of Expression Differences among Human Individuals Using Only Genotype Information

Many genetic variants that are significantly correlated to gene expression changes across human individuals have been identified, but the ability of these variants to predict expression of unseen individuals has rarely been evaluated. Here, we devise an algorithm that, given training expression and genotype data for a set of individuals, predicts the expression of genes of unseen test individuals given only their genotype in the local genomic vicinity of the predicted gene. Notably, the resulting predictions are remarkably robust in that they agree well between the training and test sets, even when the training and test sets consist of individuals from distinct populations. Thus, although the overall number of genes that can be predicted is relatively small, as expected from our choice to ignore effects such as environmental factors and trans sequence variation, the robust nature of the predictions means that the identity and quantitative degree to which genes can be predicted is known in advance. We also present an extension that incorporates heterogeneous types of genomic annotations to differentially weigh the importance of the various genetic variants, and we show that assigning higher weights to variants with particular annotations such as proximity to genes and high regional G/C content can further improve the predictions. Finally, genes that are successfully predicted have, on average, higher expression and more variability across individuals, providing insight into the characteristics of the types of genes that can be predicted from their cis genetic variation.     

INTERACTING PHENOTYPES AND THE EVOLUTIONARY PROCESS. III. SOCIAL EVOLUTION

Interactions among conspecifics influence social evolution through two distinct but intimately related paths. First, they provide the opportunity for indirect genetic effects (IGEs), where genes expressed in one individual influence the expression of traits in others. Second, interactions can generate social selection when traits expressed in one individual influence the fitness of others. Here, we present a quantitative genetic model of multivariate trait evolution that integrates the effects of both IGEs and social selection, which have previously been modeled independently. We show that social selection affects evolutionary change whenever the breeding value of one individual covaries with the phenotype of its social partners. This covariance can be created by both relatedness and IGEs, which are shown to have parallel roles in determining evolutionary response. We show that social selection is central to the estimation of inclusive fitness and derive a version of Hamilton's rule showing the symmetrical effects of relatedness and IGEs on the evolution of altruism. We illustrate the utility of our approach using altruism, greenbeards, aggression, and weapons as examples. Our model provides a general predictive equation for the evolution of social phenotypes that encompasses specific cases such as kin selection and reciprocity. The parameters can be measured empirically, and we emphasize the importance of considering both IGEs and social selection, in addition to relatedness, when testing hypotheses about social evolution.     

Social Selection and Indirect Genetic Effects in Structured populations

Social selection and indirect genetic effects (IGEs) are established concepts in both behavioural ecology and evolutionary genetics. While IGEs describe effects of an individual’s genotype on phenotypes of social partners (and may thus affect their fitness indirectly), the concept of social selection assumes that a given phenotype in one individual affects the fitness of other individuals directly. Although different frameworks, both have been used to investigate the evolution of social traits, such as cooperative behaviour. Despite their similarities (both concepts consider interactions among individuals), they differ in the type of interaction. It remains unclear whether the two concepts make the same predictions about evolutionary trajectories or not. To address this question, we investigate four possible scenarios of social interactions and compare the effects of IGEs and social selection for trait evolution in a multi-trait multi-member model. We show that the two mechanisms can yield similar evolutionary outcomes and that both can create selection pressure at the group level. However, the effect of IGEs can be stronger due to the possibility of feedback loops. Finally, we demonstrate that IGEs, but not social selection gradients, may lead to differences in the direction of evolutionary response between genotypes and phenotypes.     

Pedigree relatedness, not greenbeard genes, explains eusociality

The evolution of eusociality, where some individuals altruistically forgo reproduction, poses a dilemma which can be solved by kin selection, i.e. by considering relatedness among cooperating individuals. Most often, such relatedness is caused by pedigree relationships between family members. However, an alternative explanation has recently emerged in an article by Wilson and Hölldobler (2005) . Wilson and Hölldobler see the ecological benefit of group living as the principal reason for sociality. In their scenario, individuals sharing the same altruistic allele (analogous to a greenbeard gene) preferentially interact with each other, regardless of pedigree relatedness. We argue that empirical evidence has the potential to answer the question of whether pedigree relatedness plays a role in the evolution of eusociality. We conclude that both phylogenetic studies and studies of intra-genomic conflict support the importance of pedigree relatedness in the evolution of eusociality.     

Recent trends in evolutionary ethics: greenbeards!

In recent years, there has been growing awareness among evolutionary ethicists that systems of cooperation based upon “weak” reciprocity mechanisms (such as tit-for-tat) lack scalability, and are therefore inadequate to explain human ultrasociality. This has produced a shift toward models that strengthen the cooperative mechanism, by adding various forms of commitment or punishment. Unfortunately, the most prominent versions of this hypothesis wind up positing a discredited mechanism as the basis of human ultrasociality, viz. a “greenbeard.” This paper begins by explaining what a greenbeard is, and why evolutionary theorists are doubtful that such a mechanism could play a significant role in explaining human prosociality. It goes on to analyze several recent philosophical works in evolutionary ethics, in order to show how the suggestion that morality acts as a commitment device tacitly relies upon a greenbeard mechanism to explain human cooperation. It concludes by showing how some early scientific models in the “evolution of cooperation” literature, which introduced punishment as a device to enhance cooperation, also tacitly relied upon a greenbeard mechanism.     

The evolution of mutualism with modifiers

Mutualisms are widespread, yet their evolution has received less theoretical attention than within‐species social behaviors. Here, we extend previous models of unconditional pairwise interspecies social behavior, to consider selection for donation but also for donation‐suppressing modifiers. We present conditions under which modifiers that suppress costly donation receive either positive or negative selection; assortment only at the donation locus always leads to selection for donation suppression, as in within‐species greenbeard traits. However, genomewide assortment with modifier loci can lead to intermediate levels of donation, and these can differ in the two species even when payoffs from donation are additive and symmetric. When costly donation between species can evolve without being suppressed, we argue that it is most appropriately explained by indirect fitness benefits within the donating species, using partner species as vectors for altruism. Our work has implications for identifying both the stability and the ultimate beneficiaries of social behavior between species.     

Environment-specific shell shape variation in the boring mytilid Leiosolenus patagonicus

Environmental conditions induce phenotypic responses (behavioural, morphological and physiological) in many marine species. The boring mytilid Leiosolenus patagonicus inhabits different types of substrata, such as sandstone intertidal and hard subtidal substrata (here called ‘lifeless-substratum’) and shells of bivalve species (here called ‘live-substratum’), where they are exposed to different restrictions in their growth. We used geometric morphometric methods to compare the contour shell shapes from each type of substratum (live and lifeless) since we expected the body shape to differ between individuals from these different substrata. The results showed that the shell shape depends on the type of substratum where the larvae recruit. The mean shell shapes of individuals from the live-substratum are more slender than those of the individuals growing inside the lifeless-substratum. Individuals from live-substratum can adapt their phenotype depending on the oyster’s anti-parasitism responses, while in lifeless-substratum they are able to build their own refuges.     

A tale of two defectors: the importance of standing for evolution of indirect reciprocity

Indirect reciprocity occurs when the cooperative behavior between two individuals is contingent on their previous behavior toward others. Previous theoretical analysis indicates that indirect reciprocity can evolve if individuals use an image-scoring strategy. In this paper, we show that, when errors are added, indirect reciprocity cannot be based on an image-scoring strategy. However, if individuals use a standing strategy, then cooperation through indirect reciprocity is evolutionarily stable. These two strategies differ with respect to the information to which they attend. While image-scoring strategies only need attend to the actions of others, standing strategies also require information about intent. We speculate that this difference may shed light on the evolvability of indirect reciprocity. Additionally, we show that systems of indirect reciprocity are highly sensitive to the availability of information. Finally, we present a model which shows that if indirect reciprocity were to evolve, selection should also favor trusting behavior in relations between strangers.     

The Effects of Early Feeding Experience on Long-term Seed Choice by Canaries (Serinus canaria)

Early experience has been found to have long-term effects on behaviour such as social imprinting and song learning. In this paper we investigate whether early experience with particular types of food can lead to long-term feeding preferences in canaries. For 8 wk following the onset of independent foraging, two groups of naive fledgling canaries were reared on different diets. One group had a choice of four seed types, while individuals in the other group received only one type of seed. After this training period, all the birds were given a mixed seed diet for a further 15 wk, and then their preference for the original seeds was tested. All six birds that had been given four seeds during the training period showed the same preference, namely: hemp > niger > millet > linseed. However, all the birds that had been trained on one seed type only, still preferred the seed on which they had been trained. After a further 23 wk on a mixed-seed diet, birds from the restricted early diet group showed no further preference for the seed on which they were trained, and their seed choice at this stage was similar to the birds that had received four seeds. We conclude that early experience can affect food choice in canaries for at least 15 wk, but is subordinate to other influences in the longer term.     

Ideal free distributions, evolutionary games, and population dynamics in multiple-species environments

In this article, we develop population game theory, a theory that combines the dynamics of animal behavior with population dynamics. In particular, we study interaction and distribution of two species in a two-patch environment assuming that individuals behave adaptively (i.e., they maximize Darwinian fitness). Either the two species are competing for resources or they are in a predator-prey relationship. Using some recent advances in evolutionary game theory, we extend the classical ideal free distribution (IFD) concept for single species to two interacting species. We study population dynamical consequences of two-species IFD by comparing two systems: one where individuals cannot migrate between habitats and one where migration is possible. For single species, predator-prey interactions, and competing species, we show that these two types of behavior lead to the same population equilibria and corresponding species spatial distributions, provided interspecific competition is patch independent. However, if differences between patches are such that competition is patch dependent, then our predictions strongly depend on whether animals can migrate or not. In particular, we show that when species are settled at their equilibrium population densities in both habitats in the environment where migration between habitats is blocked, then the corresponding species spatial distribution need not be an IFD. Thus, when species are given the opportunity to migrate, they will redistribute to reach an IFD (e.g., under which the two species can completely segregate), and this redistribution will also influence species population equilibrial densities. Alternatively, we also show that when two species are distributed according to the IFD, the corresponding population equilibrium can be unstable.     

Competition avoidance drives individual differences in response to a changing food resource in sticklebacks

Within the same population, individuals often differ in how they respond to changes in their environment. A recent series of models predicts that competition in a heterogeneous environment might promote between‐individual variation in behavioural plasticity. We tested groups of sticklebacks in patchy foraging environments that differed in the level of competition. We also tested the same individuals across two different social groups and while alone to determine the social environment's influence on behavioural plasticity. In support of model predictions, individuals consistently differed in behavioural plasticity when the presence of conspecifics influenced the potential payoffs of a foraging opportunity. Whether individuals maintained their level of behavioural plasticity when placed in a new social group depended on the environmental heterogeneity. By explicitly testing predictions of recent theoretical models, we provide evidence for the types of ecological conditions under which we would expect, and not expect, variation in behavioural plasticity to be favoured.     

The four classes of endogenous murine leukemia virus: structural relationships and potential for recombination

The process by which leukemogenic viruses are generated during the lifetime of certain strains of mice is poorly understood. We have therefore set out to define all the murine leukemia virus-related endogenous proviruses of HRS/J mice. We have cloned 34 different proviral fragments and their flanking cellular sequences. These have been characterized by restriction enzyme analysis, by fingerprinting in vitro-synthesized RNA, and by DNA sequencing. We conclude that all the proviruses can be assigned into one of four different classes: the previously characterized ecotropic, xenotropic, and polytropic viruses, as well as a new class we have termed modified polytropic viruses. The xenotropic, polytropic, and modified polytropic classes are closely related to one another, but as a group they differ considerably from the ecotropic class. Sequence analyses show that both polytropic and modified polytropic sequences can contribute env sequences to recombinant viruses.     

Express yourself: bold individuals induce enhanced morphological defences

Organisms display an impressive array of defence strategies in nature. Inducible defences (changes in morphology and/or behaviour within a prey''s lifetime) allow prey to decrease vulnerability to predators and avoid unnecessary costs of expression. Many studies report considerable interindividual variation in the degree to which inducible defences are expressed, yet what underlies this variation is poorly understood. Here, we show that individuals differing in a key personality trait also differ in the magnitude of morphological defence expression. Crucian carp showing risky behaviours (bold individuals) expressed a significantly greater morphological defence response when exposed to a natural enemy when compared with shy individuals. Furthermore, we show that fish of different personality types differ in their behavioural plasticity, with shy fish exhibiting greater absolute plasticity than bold fish. Our data suggest that individuals with bold personalities may be able to compensate for their risk-prone behavioural type by expressing enhanced morphological defences.     

Self-Organization in Primates: Understanding the Rules Underlying Collective Movements

Patterns of collective movements, such as the distribution of leadership and the organization of individuals, may be either homogeneously (no leader, no specific order), or heterogeneously (1 or several leaders, and a highly stable order) distributed. Members of a group need to synchronize their activities and coordinate their movements, despite the fact that they differ in physiological or morphological traits. The degree of difference in these traits may affect their decision-making strategy. We demonstrate how a theoretical model based on a variation of a simple mimetic rule, i.e., an amplification process, can result in each of the various collective movement patterns and decision-making strategies observed in primates and other species. We consider cases in which 1) the needs of different individuals are identical and social relationships are equivalent between group members, 2) the needs of individuals are different and social relationships are equivalent, and 3) the needs of individuals are different and social relationships are different. Finally, 4) we assess how the synergy between 2 mimetism rules, specifically the probability of joining a movement and that of canceling an initiation, allows group members to stay synchronized and cohesive. Our models suggest that similar self-organized processes have been selected as reliable and well-adapted means for optimal collective decisions across species, despite differences in their biological and social characteristics.     

Attractiveness and preferences for redistribution

Using unique German survey data, we show that beauty is associated with lower support for redistribution and that attractive individuals are more likely to believe that economic success depends more on individual effort rather than external circumstances. These results are consistent with voting behavior, as we find that beauty correlates with voting for the Free Democratic Party (FDP), which historically advocates a low level of taxation. These associations do not differ by gender and remain also if household income and employment status are controlled for, suggesting that the relationship between attractiveness and political preferences is not fully explained by the beauty premium in the labor market. We test alternative channels that might drive our results, but the correlation between attractiveness and preferences for redistribution always persists. We suggest that our results might be explained by the way in which attractive individuals rationalize the advantages they get thanks to their beauty.     

Bonobos extract meaning from call sequences

Studies on language-trained bonobos have revealed their remarkable abilities in representational and communication tasks. Surprisingly, however, corresponding research into their natural communication has largely been neglected. We address this issue with a first playback study on the natural vocal behaviour of bonobos. Bonobos produce five acoustically distinct call types when finding food, which they regularly mix together into longer call sequences. We found that individual call types were relatively poor indicators of food quality, while context specificity was much greater at the call sequence level. We therefore investigated whether receivers could extract meaning about the quality of food encountered by the caller by integrating across different call sequences. We first trained four captive individuals to find two types of foods, kiwi (preferred) and apples (less preferred) at two different locations. We then conducted naturalistic playback experiments during which we broadcasted sequences of four calls, originally produced by a familiar individual responding to either kiwi or apples. All sequences contained the same number of calls but varied in the composition of call types. Following playbacks, we found that subjects devoted significantly more search effort to the field indicated by the call sequence. Rather than attending to individual calls, bonobos attended to the entire sequences to make inferences about the food encountered by a caller. These results provide the first empirical evidence that bonobos are able to extract information about external events by attending to vocal sequences of other individuals and highlight the importance of call combinations in their natural communication system.