Diversity in soil fungi from undisturbed and disturbed Celtis tala and Scutia buxifolia forests in the eastern Buenos Aires province (Argentina)

The rhizospheric soil microfungi from a native forest (undisturbed and disturbed) were studied using soil dilution plate and soil washing methods. Fungi were isolated using slightly acid and alkaline culture media. 54 taxa were isolated: 49 from undisturbed forest soil and 37 from disturbed forest soil. Acremonium sp., Aspergillus ustus, Coemansia pectinata, Doratomyces stemonitis, Fusarium solani, F. oxysporum, Gliocladium roseum, Humicola fusco-atra, Mortierella sp., Penicillium lilacinum, Trichoderma harzianum, and T. koningii, showed the highest frequency, in both, undisturbed and disturbed forests. In undisturbed soil forest the biodiversity index was 3.97 whereas in disturbed ones was 3.89.     

Giardia sp. and Cryptosporidium sp. infections in primates in fragmented and undisturbed forest in western Uganda

In June 2005, we collected 115 fecal samples from wild primates in western Uganda and examined them for Cryptosporidium sp. and Giardia sp. with the use of immunofluorescent antibody (IFA) detection. We sampled primates from an undisturbed forest in Kibale National Park and from 3 highly disturbed forest fragments outside the park. Of disturbed forest samples, red colobus (Pilocolobus tephrosceles) and red-tailed guenons (Cercopithecus ascanius) harbored species of Cryptosporidium or Giardia, but black-and-white colobus (Colobus guereza) did not. All primate samples from undisturbed forest were negative for both parasites. Seven of 35 (20%) red colobus and 1 of 20 red-tailed guenons (5%) from forest fragments were infected with either Cryptosporidium sp. or Giardia sp. The presence of Cryptosporidium and Giardia species in primates living in forest fragments, but not in primates in undisturbed forest, suggests that habitat disturbance may play a role in transmission or persistence of these pathogens.     

Pollen dispersal of tropical trees (Dinizia excelsa: Fabaceae) by native insects and African honeybees in pristine and fragmented Amazonian rainforest

Tropical rainforest trees typically occur in low population densities and rely on animals for cross-pollination. It is of conservation interest therefore to understand how rainforest fragmentation may alter the pollination and breeding structure of remnant trees. Previous studies of the Amazonian tree Dinizia excelsa (Fabaceae) found African honeybees (Apis mellifera scutellata) as the predominant pollinators of trees in highly disturbed habitats, transporting pollen up to 3.2 km between pasture trees. Here, using microsatellite genotypes of seed arrays, we compare outcrossing rates and pollen dispersal distances of (i) remnant D. excelsa in three large ranches, and (ii) a population in undisturbed forest in which African honeybees were absent. Self-fertilization was more frequent in the disturbed habitats (14%, n = 277 seeds from 12 mothers) than in undisturbed forest (10%, n = 295 seeds from 13 mothers). Pollen dispersal was extensive in all three ranches compared to undisturbed forest, however. Using a twogener analysis, we estimated a mean pollen dispersal distance of 1509 m in Colosso ranch, assuming an exponential dispersal function, and 212 m in undisturbed forest. The low effective density of D. excelsa in undisturbed forest (approximately 0.1 trees/ha) indicates that large areas of rainforest must be preserved to maintain minimum viable populations. Our results also suggest, however, that in highly disturbed habitats Apis mellifera may expand genetic neighbourhood areas, thereby linking fragmented and continuous forest populations.     

Disturbance of suburban Fagus forests by recreational activities: Effects on soil characteristics,above‐ground vegetation and seed bank

Questions: How does recreational disturbance (human trampling) affect soil characteristics, the performance of the understorey vegetation, and the density and species composition of the soil seed bank in Fagus sylvatica forests? Location: Suburban forests near Basel, northwestern Switzerland. Methods: We compared various soil characteristics and the performance of the understorey vegetation in six beech forest areas frequently disturbed by recreational activities with those in six undisturbed control areas, in spring 2003. In the same forest areas, the soil seed bank was investigated using the seedling emergence method. Samples were obtained from soil cores in January 2003. Results: We found substantial changes in soil compaction, above‐ground vegetation and in the soil seed bank due to recreational activities. In frequently visited areas, soil compaction was enhanced which caused a decrease in cover, height and species richness of both herb and shrub layers. Compared with control areas, the number of trampling‐tolerant species of the seed bank was significantly higher in disturbed areas, and total species richness tended to be higher in disturbed than in control areas. Furthermore, the similarity in species composition between the above‐ground vegetation and seed bank was significant lower in disturbed than in control areas. Conclusions: The intensive use of suburban forests for recreational activities, mainly picnicking, affects the vegetation of natural beech forests. Our study indicates that a restoration of degraded forest areas from the soil seed bank would result in a substantial change of the vegetation composition.     

Influence of habitat,litter type,and soil invertebrates on leaf-litter decomposition in a fragmented Amazonian landscape

Amazonian forest fragments and second-growth forests often differ substantially from undisturbed forests in their microclimate, plant-species composition, and soil fauna. To determine if these changes could affect litter decomposition, we quantified the mass loss of two contrasting leaf-litter mixtures, in the presence or absence of soil macroinvertebrates, and in three forest habitats. Leaf-litter decomposition rates in second-growth forests (>10 years old) and in fragment edges (<100 m from the edge) did not differ from that in the forest interior (>250 m from the edges of primary forests). In all three habitats, experimental exclusion of soil invertebrates resulted in slower decomposition rates. Faunal-exclosure effects were stronger for litter of the primary forest, composed mostly of leaves of old-growth trees, than for litter of second-growth forests, which was dominated by leaves of successional species. The latter had a significantly lower initial concentration of N, higher C:N and lignin:N ratios, and decomposed at a slower rate than did litter from forest interiors. Our results indicate that land-cover changes in Amazonia affect decomposition mainly through changes in plant species composition, which in turn affect litter quality. Similar effects may occur on fragment edges, particularly on very disturbed edges, where successional trees become dominant. The drier microclimatic conditions in fragment edges and second-growth forests (>10 years old) did not appear to inhibit decomposition. Finally, although soil invertebrates play a key role in leaf-litter decomposition, we found no evidence that differences in the abundance, species richness, or species composition of invertebrates between disturbed and undisturbed forests significantly altered decomposition rates.     

Armillaria mellea as a cause of oak decline in Hatam-baigh forest of Iran

A200 ha forest of "Hatam-baig" is located in Ardebil Province on the Northwest of Iran. Oak trees (Quercus macranthera Fisch & Mey) in this forest have been faced with declining and extinction since 1991, that has destructed about one third of the forest trees until now. This disorder was expressed in various symptoms including wilting, defoliation and decline. In order to identify factors causing decline, a study was managed from 1998 to 2001. Samples were taken from roots, trunks, crowns and soil beneath the canopy and were cultured on different culture media subsequently. Armillaria mellea (Vahl) P. Kumm., Phytophthora cryptogea Pethybr. & Laff., Dematophora sp., Pythium aphanidermatum (Edson) Fitzp. and Fusarium spp. were the most common isolated fungi. A. mellea appeared to be the essential causal agent of the decline according to the studies made on oak tress decline around the world and based on brown rot observed beneath mycelial fans in the cross section prepared from the trunk and characteristics of the isolated fungi. The fungus activity had been favored by physiological weakness and stresses in oak rootstocks caused by brown- tail moth (Euproctis chrysorhoea L.) and drought stress in infected trees. The biological species of this fungus was identified as Armillaria mellea, using hybridization tests and application of haploid test strains. The fungi such as Phytophthora sp., Pythium sp., and Dematophora sp. can not be infective in this forest due to being hydrophylous. In the southern part of the forest with remarked steepness, the severity of the decline appears to be more than that in the smoothly northern part. The decline of Q. macranthera is reported as matrix nova. The report of the isolated fungi from this oak species is also universally new.     

Forest Modification Affects Diversity (But Not Dynamics) of Speciose Tropical Pyraloid Moth Communities

We studied temporal and spatial dynamics of extremely diverse moth ensembles (Lepidoptera: Pyraloidea) along a gradient of forest disturbance ranging from undisturbed primary tropical rain forest to different kinds of modified forest and open cultivated land at the margin of Mount Kinabalu National Park (Sabah, East Malaysia). We sampled moths by light trapping during two periods (March‐May and August‐September 1997). We collected a total of 7724 individuals representing 680 species during 78 light‐trapping nights at six study sites. Species diversity (Fisher's α) of ensembles in undisturbed primary forest was distinctly higher than in disturbed or secondary forest. More pyraloid moths were attracted in undisturbed primary forest. Samples from disturbed primary or old‐growth secondary forest were statistically indistinguishable from the undisturbed primary forest ensemble in regard to species composition. Thus, pyraloid ensembles from disturbed forest with tall trees remaining appeared to represent impoverished subsets of the undisturbed primary forest community. The more heavily disturbed sites had a distinct fauna and showed a stronger faunal differentiation among each other. Four species of the genus Eoophyla, in which aquatic larvae feed on algae in fast‐running streams benefited prominently from forest disturbance. Temporal variation of ensembles was remarkably concordant across the disturbance gradient. Relative abundance variation of the commonest species was identical at all sites. Overall, pyraloid moths responded more sensitively to anthropogenic habitat alteration than most other moth taxa studied thus far in tropical regions and allowed for an analysis of diversity patterns at a high temporal resolution.     

Tree diversity and population structure in undisturbed and human-impacted stands of tropical wet evergreen forest in Arunachal Pradesh, Eastern Himalayas, India

Tree species richness, tree density, basal area, population structure and distribution pattern were investigated in undisturbed, mildly disturbed, moderately disturbed and highly disturbed stands of tropical wet evergreen forests of Arunachal Pradesh. The forest stands were selected based on the disturbance index (the basal area of the cut trees measured at ground level expressed as a fraction of the total basal area of all trees including felled ones): (i) undisturbed stand (0% disturbance index), (ii) mildly disturbed (20% disturbance index), (iii) moderately disturbed (40% disturbance index), and (iv) highly disturbed stand (70% disturbance index). Tree species richness varied along the disturbance gradient in different stands. The mildly disturbed stand showed the highest species richness (54 of 51 genera). Species richness was lowest (16 of 16 genera) in the highly disturbed stand. In the undisturbed stand, 47 species of 42 genera were recorded while in the moderately disturbed stand 42 species of 36 genera were found. The Shannon–Wiener diversity index for tree species ranged from 0.7 to 2.02 in all the stands. The highest tree diversity was recorded in the undisturbed stand and the lowest in the highly disturbed stand. The stands differed with respect to the tree species composition at the family and generic level. Fagaceae, Dipterocarpaceae and Clusiaceae dominated over other families and contributed 53% in the undisturbed, 51% in the mildly disturbed, 42% in the moderately disturbed and 49% in the highly disturbed forest stands to the total density of the respective stand. Stand density was highest (5452 stems ha^–1) in the undisturbed stand, followed by the mildly disturbed stand (5014), intermediate (3656) in the moderately disturbed stand and lowest (338) in the highly disturbed stand. Dominance, calculated as the importance value index of different species, varied greatly across the stands. The highest stand density and species richness were represented in the medium girth class (51–110 cm) in all the stands. In the undisturbed stand, the highest density was found in the 111–140 cm girth class, while in the mildly disturbed stand the 51–80 cm girth range recorded the highest density. About 55, 68 and 52% species were found to be regenerating in the undisturbed, mildly disturbed and moderately disturbed stands, respectively. No regeneration was recorded in the highly disturbed stand. Variation in species richness, distribution pattern and regeneration potential is related to human interference and the need for forest conservation is emphasized.     

Biochemical properties of soils of undisturbed and disturbed mangrove forests of South Andaman (India)

Studies on soil quality of mangrove forests would be of immense use in minimizing soil degradation and in adopting strategies for soil management at degraded sites. Among the various parameters of soil quality, biological and biochemical soil properties are very sensitive to environmental stress and provide rapid and accurate estimates on changes in quality of soils subjected to degradation. In this study, we determined the general and specific biochemical characteristics of soils (0-30 cm) of inter-tidal areas of 10 undisturbed mangrove forest sites of S. Andaman, India. In order to determine the effects of disturbance, soils from the inter-tidal areas of 10 disturbed mangrove forest sites were also included in the study. The general biochemical properties included all the variables directly related to microbial activity and the specific biochemical parameters included the activities of extracellular hydrolytic enzymes that are involved in the carbon, nitrogen, sulfur and phosphorus cycles in soil. The pH, clay, cation exchange capacity, Al₂O₃ and Fe₂O₃ levels exhibited minimum variation between the disturbed and undisturbed sites. In contrast, organic C, total N, Bray P and K levels exhibited marked variation between the sites and were considerably lower at the disturbed sites. The study also revealed marked reductions in microbial biomass and activity at the disturbed sites. In comparison to the undisturbed sites, the levels of all the general biochemical parameters viz., microbial biomass C, microbial biomass N, N flush, basal respiration, metabolic quotient (qCO₂), ATP, N mineralization rates and the activities of dehydrogenase and catalase were considerably lower at the disturbed sites. Similarly, drastic reductions in the activities of phosphomonoesterase, phosphodiesterase, ß-g1ucosidase, urease, BAA-protease, casein-protease, arylsulfatase, invertase and carboxymethylcellulase occurred at the disturbed sites due mainly to significant reductions in organic matter/substrate levels. The data on CO₂ evolution, qCO₂ and ATP indicated the dominance of active individuals in the microbial communities of undisturbed soils and the ratios of biomass C:N, ATP:biomass C and ergosterol:biomass C ratios indicated low N availability and the possibility of fungi dominating over bacteria at both the mangrove sites. Significant and positive correlations between soil variables and biochemical properties suggested that the number and activity of soil microorganisms depend mainly on the quantity of mineralizable substrate and the availability of nutrients in these mangrove soils.     

The effects of windthrow on plant species richness in a Central European beech forest

The effects of soil disturbance caused by the uprooting of a single or a few canopy trees on species richness and composition of vascular plant species and bryophytes were examined in a temperate beech forest (Fagus sylvatica) in northern Germany. We recorded the vegetation in 57 pairs of disturbed and adjacent undisturbed plots and established a chronosequence of mound ages to study the effect of time since microsite formation on plant species richness and composition. We found significant differences in plant species richness and composition between disturbed and adjacent undisturbed plots. Species richness of both vascular plants and bryophytes was higher in the disturbed than in the undisturbed plots, but these differences were more pronounced for bryophytes. We suggest that three main factors are responsible for this differential response. The availability of microsites on the forest floor that are suitable for the recruitment of bryophytes is lower than for vascular plants. Establishment of bryophytes in disturbed microsites is favoured by a greater abundance of propagules in the close vicinity and in the soil of the disturbed microsites, as well as by a greater variety of regeneration strategies in bryophytes than in vascular plants. Time since mound formation was a major factor determining plant species richness and composition. A significant decrease in the mean number of species was found from young mounds to intermediate and old mounds. However, differences were observed between vascular plants and bryophytes in the course of changes through time in species richness and composition. A large number of exclusive and infrequent vascular plant species was observed on young mounds, among them several disturbance specialists. We suggest that the establishment of many vascular plant species was infrequent and short-lived due to unfavourable light conditions and a low abundance of propagules. By contrast, the development of a litter layer was the main reason for the decreased mean number of bryophytes on old mounds. Our study supports the view that groups of species differing in important life history traits exhibit different responses to soil disturbance.     

Fecal corticosterone, body mass, and caching rates of Carolina chickadees (Poecile carolinensis) from disturbed and undisturbed sites

We tested for hormonal and behavioral differences between Carolina chickadees (Poecile carolinensis) taken from a disturbed (recently logged) forest, an undisturbed forest, or a residential site. We measured fecal corticosterone and body mass levels in the field, and fecal corticosterone, body mass, and caching behavior in an aviary experiment. In the field, birds from the disturbed forest exhibited significantly higher fecal corticosterone levels than birds from either the undisturbed forest or from the residential site. Birds from the disturbed forest also exhibited lower body mass than those from the undisturbed forest but higher body mass than those from the residential site. Our aviary results suggest that these physiological differences between field sites are the result of short-term responses to ecological factors: neither body mass nor fecal corticosterone levels varied between birds captured at different sites. Aviary sample sizes were sufficient to detect seasonal variation in fecal corticosterone (lowest in summer), body mass (highest in spring), and rate of gain in body mass (highest in winter). Under "closed-economy" aviary conditions (all food available from a feeder in the aviary), there were no site differences in the percent of seeds taken from the feeder that were cached. However, under "open-economy" conditions (food occasionally available ad libitum), significantly fewer seeds were cached by birds from the disturbed forest compared to the undisturbed or residential sites. On average, there was only a two-fold difference in population levels of fecal corticosterone. This difference is about the same as an increase in fecal corticosterone induced by a 2-h increase in food deprivation and cannot be considered to be an acute stress response to disturbance.     

白皮松天然林外生菌根土壤繁殖体库

为更好地恢复和保存白皮松天然林,在陕西省白皮松残存林地采集根际土壤,采用幼苗检测法获取土壤外生菌根真菌繁殖体,用形态观察分类与ITS-PCR-sequencing相结合的方法进行菌根鉴定,研究白皮松林地外生菌根真菌土壤繁殖体库的组成.结果表明: 在白皮松幼苗菌根中共获得73个特异性序列;按照97%的相似度阈值,将序列划分为12个可操作分类单元(OTUs);稀疏曲线分析表明,本研究基本获得了白皮松土壤外生菌根繁殖体库的多样性.常见种有土生空团菌、Tomentella sp.、Tuber sp.等.出现频率最高的一个OTU(80%)与已知种类相似度较低(75%),说明其可能是一个新的菌根菌种类.白皮松残存天然林地的外生菌根繁殖体库中具有其他松科植物土壤繁殖体库常见的种类,但是频率最高的种类未能鉴定到已知属或科,说明白皮松菌根繁殖体库具有其宿主特异性.这种群落特异构成也说明研究和利用白皮松土壤外生菌根真菌繁殖体库具有特殊性和重要性.     

Variation in soil seed bank species composition of a dry coniferous forest: spatial scale and sampling considerations

In order to assess the effects of disturbance on soil seed bank spatial structure, variation in seed bank species composition was analyzed at two spatial scales in mature (undisturbed) and recently disturbed stands of Interior Douglas-fir forest in south-central British Columbia. Coarse-scale analysis among stands 10–100 km apart using Multi-Response Permutation Procedures showed that individual mature stands were mainly characterized by unique seed bank species compositions. Disturbance had an homogenizing effect on seed bank species composition at the coarse scale––there was less variability among stands following disturbance by both low and high severity fires, and by non-salvage logging. In contrast, finer scale analysis among sampling units c. 10 m apart showed that heterogeneity in seed bank species composition was greater on severely burned and logged sites, commensurate with greater levels of soil disturbance, than on lightly burned and undisturbed sites. Despite the high intensity of seed bank sampling (sixty 25 cm² soil samples from each of 16 sites), species-area curves leveled off only when infrequent species were removed from the dataset. The number of seed bank samples required to account for the common species ranged from 84 on severely burned sites, to 196 on undisturbed sites; more than the 240 samples collected per disturbance class in this study would have been required to account for the remaining infrequent species. Overall, this study highlights the importance of sampling intensively within multiple stands to capture the variation in species composition inherent to these dry coniferous forest soil seed banks.     

Physical disturbance of an upland grassland influences the impact of elevated UV-B radiation on metabolic profiles of below-ground micro-organisms

This investigation determined the response of soil microbial communities to enhanced UV‐B radiation and disturbance in upland grassland. A factorial field experiment encompassing two levels of UV‐B supplementation (simulating ambient and a 30% increase in stratospheric ozone) and two levels of disturbance (disturbed and undisturbed) was established at Buxton Climate Change Impacts Laboratory, Derbyshire, UK, and maintained for 7 years prior to sampling. Enhanced UV‐B increased microbial utilization of carbohydrates, carboxylic acids, polymers and aromatic compounds present in Biolog® GN plates when inoculated with soils taken from disturbed plots, but did not affect carbon utilization of soil microbial communities associated with undisturbed plots (UV‐B×Disturbance interaction, P<0.05 for each substrate type). UV‐B treatment did not affect numbers of bacteria or fungi. Direct microscopic counts showed fewer bacteria in soil originating from disturbed plots than from undisturbed plots (Disturbance, P<0.001), although a greater number of culturable bacteria and fungi were isolated from disturbed than from undisturbed soils (Disturbance, P<0.001). No UV‐B‐ or disturbance‐related differences in protein, starch or urea hydrolysis were exhibited by bacterial isolates. UV‐B treatment did not affect total plant biomass within undisturbed plots or the biomass of individual groupings of grasses, forbs and mosses. Per cent root length colonized by arbuscular mycorrhizal fungi (AMF) was not affected by enhanced UV‐B radiation in the undisturbed plots. Neither AMF nor plant biomass was measured in disturbed plots. The key findings of this study show that UV‐B‐mediated alterations in carbon utilization occurred in soil microbial communities subjected to disturbance, but such changes were not observed in communities sampled from undisturbed grassland. Differences in the catabolic potential of microbial communities from disturbed grassland subjected to enhanced UV‐B are probably related to plant‐mediated changes in resource availability or quality.     

Patterns of Rodent Species Diversity and Abundance in a Kenyan Relict Tropical Rainforest

Patterns of rodent species abundance and diversity were examined over a 5 months period in two areas of a Kenyan relict tropical rainforest. The two areas are subjected to different administrations which lead to various levels of anthropogenic disturbance: one can be considered relatively disturbed and one relatively undisturbed. Anthropogenic disturbance causes a reduction in woody stem density between 0 and 1.5 m and reduced understory tree canopy cover. Rodent abundance was estimated using the program CAPTURE and compared with the number of individuals actually captured. Density was estimated with three different methods, two of these utilised a boundary strip to estimate effective size of the area trapped. Density resulted in being relatively high in both areas, so population might have been at a peak. Species richness was higher in the disturbed forest, while species diversity and evenness was higher in the undisturbed forest. We suggest that in the disturbed forest the increase in number of species might be due to sporadical entrance in the forest by non-forest species, while the decrease in diversity might be due to the decrease of lower strata vegetation that occurs in the disturbed forest, hence this factor might affect species equitability. Bibliographic data supports this hypothesis as rodent species diversity and ground vegetation cover have been found to be correlated.     

Dung beetle assemblages in primary forest and disturbed habitats in a tropical dry forest landscape in western Mexico

Dung beetles (Scarabaeinae) are conspicuous components in most terrestrial ecosystems, performing important ecological functions and services. Being sensitive to several types of disturbance, they have been successfully used as indicators of habitat change. Dung beetle communities in tropical rainforests have been well studied, but considerably less information is available for tropical dry forests. In this study I sampled dung beetles in two undisturbed habitats, deciduous forest and semideciduous forest, and two disturbed habitats, secondary forest and open area habitat, in the Chamela-Cuixmala region of western Mexico. Dung beetle species with high indicator value for each habitat were identified. Beetle abundance, observed species richness and estimated species richness were similar in the three forest habitats, but significantly lower in the open area habitat. A more detailed analysis of species-specific abundances in the three forest habitats revealed some differences. Transects of one of the undisturbed habitats, the deciduous forest, were more similar to the non-adjacent transects of disturbed secondary forest, than to the adjacent undisturbed semideciduous forest transects. Unlike studies in other tropical sites that have found a decrease in equitability in Scarabaeinae assemblages between undisturbed forest and disturbed habitat (particularly open habitats), in the Chamela-Cuixmala region all four habitats showed similar low equitability in community structure, with two or three very dominant species.     

Effects of anthropogenic disturbance on plant diversity and community structure of a sacred grove in Meghalaya, northeast India

This study analyses the effects of anthropogenic disturbance on plant diversity and community attributes of a sacred grove (montane subtropical forest) at Swer in the East Khasi Hills district of Meghalaya in northeast India. The undisturbed, moderately disturbed and highly disturbed stands were identified within the sacred grove on the basis of canopy cover, light interception and tree (cbh 15 cm) density. The undisturbed forest stand had >40% canopy cover, >50% light interception and a density of 2103 trees per hectare, whereas the highly disturbed stand had <10% canopy cover, <10% light interception and 852 trees per hectare. The moderately disturbed stand occupied the intermediate position with respect to these parameters. The study revealed that the mild disturbance favoured species richness, but with increased degree of disturbance, as was the case in the highly disturbed stand, the species richness markedly decreased. The number of families of angiosperms was highest (63) in the undisturbed stand, followed by the moderately (60) and highly disturbed (46) stands. The families Rubiaceae, Asteraceae and Poaceae were the dominant families in the sacred forest. Rubiaceae was represented by 11, 14 and 10 species in the undisturbed, moderately disturbed and highly disturbed stands, respectively, whilst the family Asteraceae had 16 species in the moderately disturbed stand and 14 species in the highly disturbed stand. The number of families represented by a single species was reduced significantly from 33 in the undisturbed stand to 23 in the moderately and 21 in the highly disturbed stand. The similarity index was maximum (71%) between the undisturbed and moderately disturbed stand and minimum (33%) between the undisturbed and highly disturbed stands. The Margalef index, Shannon diversity index and evenness index exhibited a similar trend, with highest values in the moderately disturbed stand. In contrast, the Simpson dominance index was highest in the highly disturbed stand. There was a sharp decline in tree density and basal area from the undisturbed (2103 trees ha^–1 and 26.9 m² ha^–1) to the moderately disturbed (1268 trees ha^–1 and 18.6 m² ha^–1) and finally to the highly disturbed (852 trees ha^–1 and 7.1 m² ha^–1) stand. Density–girth curves depicted a successive reduction in number of trees in higher girth classes from the undisturbed to the moderately and highly disturbed stands. The log-normal dominance–distribution curve in the undisturbed and moderately disturbed stands indicated the complex and stable nature of the community. However, the short-hooked curve obtained for the highly disturbed stand denoted its simple and unstable nature.     

Three novel species of the anamorphic yeast genus Candida in the Candida intermedia clade found in Japan, Thailand and Taiwan

Four strains of yeasts isolated in Japan, Thailand and Taiwan were found to represent three novel species of the genus Candida. The three species are located in a clade including Candida tsuchiyae, Candida thailandica and Candida akabanensis in a tree based on the D1/D2 domain sequences of the large subunit rRNA genes but clearly differentiated from these relative species. Three novel species are proposed for these strains, i. e., Candida berkhoutiae sp. nov., for strains ST-49(T) (=BCC 7749(T)=NBRC 106733(T)=CBS 11722(T)) isolated from insect frass in Thailand and SA13S01 (=NBRC 106053) isolated from soil in Taiwan, Candida ezoensis sp. nov., for strain Y07-1601-2(T) (=NBRC 105019(T)=CBS 11753(T)) isolated from forest soil in Japan, and Candida inulinophila sp. nov., for ST-369(T) (=BCC 15081(T)=NBRC 106735(T)=CBS 11725(T)) isolated from an unidentified wild mushroom from Thailand.     

Terrestrial wildlife responses to logging and fire in a Bolivian tropical humid forest

Logging and wildfire are significant anthropogenic disturbance agents in tropical forests. We compared the abundance and species richness of selected terrestrial wildlife taxa including small mammals, amphibians, reptiles, and terrestrial invertebrates in areas burned by wildfire and then logged and in adjacent undisturbed areas of a tropical humid forest in Bolivia. Disturbed areas had 24% less canopy cover than undisturbed areas but had 2.6 times the cover of large woody debris. Understory cover did not differ between disturbed and undisturbed areas. Small mammal abundance and species richness in disturbed areas were 43 and 70% higher, respectively, than in adjacent undisturbed areas. Herpetofaunal abundance did not differ significantly among disturbed and undisturbed areas, but trends for higher abundance were observed for both reptiles and amphibians in disturbed areas. Herpetofaunal species richness was significantly higher in disturbed compared to undisturbed areas. Total terrestrial invertebrate abundance, as estimated by pitfall traps, was significantly higher in undisturbed compared to disturbed areas mostly due to higher abundances of Formicidae and Blattidae. However, two invertebrate groups, Orthoptera and Lepidoptera (larvae) were more abundant in disturbed areas. Wildlife conservation strategies for areas where logging or wildfire occur should take into account species- or guild-specific responses to these disturbance agents.     

Nature and bioactivities of endolichenic fungi in Pseudocyphellaria sp., Parmotrema sp. and Usnea sp. at Hakgala montane forest in Sri Lanka

Aim:  The aim of this study was to investigate the nature and bioactivities of endolichenic fungi in three abundant lichens, Pseudocyphellaria sp., Usnea sp. and Parmotrema sp. in the lower elevation of Hakgala montane forest in Sri Lanka.
Methods and Results:  Endolichenic fungal strains, fungi that live asymptomatically in the lichen thallus, much the same way as endophytic fungi live within healthy plant tissues, were isolated from three abundant lichen species, Pseudocyphellaria sp., Usnea sp. and Parmotrema sp., at Hakgala montane forest in Sri Lanka, using the surface sterilization method. Nine endolichenic fungal strains were isolated from Parmotrema sp. and Usnea sp. separately, while 11 endolichenic fungi were recovered from the lichen Pseudocyphellaria sp. Isolation of endolichenic fungus Chrysosporium sp. 2 was common to all three lichen species. Substrate utilization patterns and antifungal activities of eight endolichenic fungal species were evaluated and the results revealed that all the test fungi were able to produce at least one enzyme to utilize the test substrates. Nigrospora sp., Chrysosporium sp. 1 and 2 and Cladosporium sp. showed antifungal activities on growth of some selected plant pathogenic fungi.
Conclusions:  Endolichenic fungal strains (29) were isolated from the lichens Parmotrema sp., Usnea sp. and Pseudocyphellaria sp. in Sri Lanka. Chrysosporium sp. 2 was common in all three lichens. Some of these endolichenic fungal strains showed antifungal activities against common plant pathogenic fungi and they are capable of utilizing the substrates by producing specific enzymes.
Significance and Impact of the Study:  The diversity and prevalence of the endolichenic fungi have not been studied extensively and this is the first report of isolation and identification of endolichenic fungi in lichens available in Sri Lanka.