Intrageneric structure of the genus Gluconobacter analyzed by the 16S rRNA gene and 16S-23S rRNA gene internal transcribed spacer sequences

Forty-nine strains belonging to the genus Gluconobacter were re-examined with respect to their species identification based on the sequences of the 16S rDNA and 16S-23S rDNA internal transcribed spacer regions (ITS). A phylogenetic tree constructed from the 16S rDNA sequences indicated the presence of five clusters corresponding, respectively, to the major five species of the genus Gluconobacter, namely G. albidus, G. cerinus, G. frateurii, G. oxydans (type species), and G. thailandicus. The type strain of G. asaii, NBRC 3276T (T=type strain) was included in the G. cerinus cluster, which is consistent with the report that G. asaii is a junior subjective synonym of G. cerinus. Existence of the G. albidus, G. cerinus, G. frateurii, G. oxydans, and G. thailandicus clusters was also recognized by the ITS sequence analysis. Both sequence analyses revealed that the G. cerinus and G. frateurii clusters were heterogeneous. The G. cerinus cluster comprised three strains of G. cerinus and one strain of G. frateurii, while the G. frateurii cluster included ten strains of G. frateurii, three of G. cerinus, and eleven of G. oxydans. These results suggest that phenotypic differences among Gluconobacter species are ambiguous and the species definition must be re-evaluated. The 16S rDNA and ITS sequences determined in this study are valuable for the identification and phylogenetic analysis of Gluconobacter species.     

Three species of Hypomyces growing on basidiomata of Stereaceae

Of the eight species of Hypomyces that occur on basidiomata of Stereum species, only H. sympodiophorus grows exclusively on members of this genus. Morphologically similar fungi were found on species of Xylobolus, a genus closely related to Stereum. These are described as two new species of Hypomyces: H. thailandicus, collected on Xylobolus cf. illudens in Thailand; and H. xyloboli, on X. frustulatus and X. subpileatus in the eastern United States. These three species are unusual in Hypomyces because of their almost indistinguishable anamorphs. In parsimony analysis of LSU nuclear rDNA sequences, the three species growing only on Stereaceae do not form a monophyletic group but their constrained monophyly is not rejected either. A morphologically similar anamorphic species, Sibirina gamsii, included in the study, is transferred to the genus Cladobotryum.     

Web-building and predatory behaviour of Spartaeus spinimanus and Spartaeus thailandicus, primitive jumping spiders (Araneae, Salticidae) from South-east Asia

Behavioural data are provided for the first time for two species of Spartaeus, S. spinimanus from Singapore and Thailand and S. thailandicus from Thailand. These jumping spiders (Araneae, Salticidae), from the primitive subfamily Spartaeinae, build large sheet webs on tree trunks and they capture prey—especially moths—on or near the web by walking to and lunging at them. When walking, Spartaeus waves its palps and legs in an unusual way. In formal tests, Spartaeus captured moths more frequently than flies and captured both moths and flies more readily when with their webs than without their webs.     

A New Approach to Detection of the Protective Effect of Escherichia coli on Gram-Positive Bacteria in Binary Biofilms in the Presence of Antibiotics

Microbiology - Binary biofilms containing gram-positive bacteria Micrococcus thailandicus HB or Kocuria rhizophila strain 4A-2G and gram-negative bacteria Escherichia coli strain K-12 or strain...     

Fellomyces mexicanus sp. nov., a new member of the yeast genus Fellomyces isolated from lichen Cryptothecia rubrocincta collected in Mexico

Two strains isolated from the lichen Cryptothecia rubrocincta collected in Mexico are described as new members of the sterigmatoconidia-producing genus Fellomyces. Based on the identical sequences of the D1/D2 regions of 26S rDNA, as well as the results of the cluster analysis of the AFLP fingerprints, the strains have been shown to be conspecific. The 26S rDNA-based phylogeny has indicated that Fellomyces mexicanus clusters within a clade including species such as four other Fellomyces isolates from lichens: F. chinensis, F. lichenicola, F. sichuanensis and F. thailandicus. F. mexicanus is characterised by the presence of xylose in the cell walls and CoQ10 in the mitochondrial membrane. The type culture is strain HB25=CBS8279.     

Identification and characterization of lactic acid bacteria isolated from traditional pickles in Sichuan, China

The pickle, a traditional fermented vegetable product, is popular in Sichuan Province of China. The objective of this study was to investigate the diversity of dominant lactic acid bacteria (LAB) in pickles by analyzing 36 samples collected from 6 different regions in Sichuan Province. The LAB counts in these samples varied from 3.90 to 8.40 log cfu ml^-1. In total, 185 presumptive LAB with Gram-positive and catalase-negative properties were obtained from these samples using MRS agar, and those strains were identified at the species level by physiological tests, 16S rRNA gene sequencing and multiplex PCR assay. The results revealed that all isolates were accurately identified as Enterococcus thailandicus (2 strains), Lactobacillus alimentarius (16 strains), L. brevis (24 strains), L. paracasei (9 strains), L. plantarum (81 strains), L. pentosus (38 strains), L. sakei (8 strains), L. spicheri (1 strain), Leuconostoc lactis (1 strain) and Pediococcus ethanolidurans (5 strains). The predominant LAB in Sichuan pickle was L. plantarum, which were isolated from most samples. The results also demonstrated that different regions in Sichuan Province have complex compositions of LAB species, and such a rich resource of LAB strains provides raw data for further studies involving probiotic strain selection.     

Heterogeneity of strains assigned to Gluconobacter frateurii Mason and Claus 1989 based on restriction analysis of 16S-23S rDNA internal transcribed spacer regions

Twenty-three strains, which were assigned to Gluconobacter frateurii and maintained at Culture Collection NBRC, were re-identified at the species level on the basis of restriction analysis of 16S-23S rDNA ITS regions by digestion with six restriction endonucleases: Bsp1286I, MboII, AvaII, TaqI, BsoBI, and BstNI. The strains examined were divided into six groups, Group III-1, Group III-2, Group III-3, Group III-4, Group III-5, and Group IV. Group III-1 and Group III-4 respectively were divided into two subgroups, Subgroup III-1a, Subgroup III-1b and Subgroup III-4a, Subgroup III-4b. Gluconobacter frateurii NBRC 3264(T) was included in Group III-2, along with strains NBRC 3265 and NBRC 3270, and G. thailandicus BCC 14116(T) was included in Group III-3, along with strains NBRC 3254, NBRC 3256, NBRC 3258, NBRC 3255, and NBRC 3257. These groupings were supported by a phylogenetic tree based on 16S-23S rDNA ITS sequences. Strains of group III-2 and Group IV were unequivocally re-identified as G. frateurii, but strains of Group III-3, Group III-4, and Group III-5 were not necessarily re-identified as G. frateurii. The results obtained indicate that the 23 strains have a taxonomically heterogeneous nature, and they are referred to as the G. frateurii complex.     

Gluconobacter thailandicus sp. nov., an acetic acid bacterium in the alpha-Proteobacteria

Four strains of acetic acid bacteria were isolated from flowers collected in Thailand. In phylogenetic trees based on 16S rRNA gene sequences and 16S-23S rDNA internal transcribed spacer (ITS) region sequences, the four isolates were located in the lineage of the genus Gluconobacter and constituted a separate cluster from the known Gluconobacter species, Gluconobacter oxydans, Gluconobacter cerinus, and Gluconobacter frateurii. In addition, the isolates were distinguished from the known species by restriction analysis of 16S-23S rDNA ITS region PCR products using three restriction endonucleases Bsp1286I, MboII, and AvaII. The DNA base composition of the isolates ranged from 55.3-56.3 mol% G+C. The four isolates constituted a taxon separate from G. oxydans, G. cerinus, and G. frateurii on the basis of DNA-DNA similarities. Morphologically, physiologically, and biochemically, the four isolates were very similar to the type strains of G. oxydans, G. cerinus, and G. frateurii; however, the isolates were discriminated in their growth at 37 degrees C from the type strains of G. cerinus and G. frateurii, and in their growth on L-arabitol and meso-ribitol from the type strain of G. oxydans. The isolates showed no acid production from myo-inositol or melibiose, which differed from the type strains of the three known species. The major ubiquinone homologue was Q-10. On the basis of the results obtained, Gluconobacter thailandicus sp. nov. was proposed for the four isolates. The type strain is isolate F149-1(T) (=BCC 14116(T)=NBRC 100600(T)=JCM 12310(T)=TISTR 1533(T)=PCU 225(T)), which had 55.8 mol% G+C, isolated from a flower of the Indian cork tree (Millingtonia hortensis) collected in Bangkok, Thailand.     

Revision of the genus Australimyza Harrison (Diptera: Australimyzidae)

Abstract.  The species of Australimyza Harrison are revised and the saprophagous larvae are described for the first time. The phylogenetic analysis revealed two species groups and one ungrouped species. One species group is distributed in New Zealand and associated subantarctic islands; all other species occur in Australia. Four new species, A. glandulifera , A. kaikoura , A. mcalpinei and A. victoria , are described, A. anisotomae is synonymized with A. australensis and a neotype is designated for the latter species. A lectotype is designated for A. macquariensis .     

西藏鹅膏菌属的分类研究

本文报告了西藏地区鹅膏菌属(Amanita)的真菌26种。其中灰鳞鹅膏菌(Amanita griseofarinosa Hongo),红鹅膏菌[A.parcivolvata(Peck)Glib.],浅杏黄鹅膏菌[A.Crocca(Quél.)Kühn.＆ Romagn.],黄赭毒鹅膏菌(A.flavorubescens Atk.),黄毒蝇鹅膏菌(A.flavoconia Atk.),史米斯鹅膏菌(A.smithiana Bas),褐黄鹅膏菌:(A.umbrinoluteaSeer.)等是我国新纪录种。西藏地区的首次新纪录13种。该属真菌均是树木的外生菌根真菌,有毒种多,具有重要的经济价值。     

Revision of the dolichoderine ant genus Axinidris Hymenoptera: Formicidae

Abstract. The Afrotropical ant genus Axinidris is revised. The pre viously known species A.acholli Weber is redescribed, as are A.tridens Arnold and A.denticulatum Wheeler, species newly transferred to Axinidris . Lectotypes are also designated for these species. Ten new species bidens, ghanensis, hylekoites, kakamegensis, kinoin, murielae, nigripes, occidentalis, palligastrion and parvus are described. The queen and male of the genus are described for the first time. A key for the separation of workers is presented, and the known biology and distribution are summarized.     

Studies on the genusArtemisia L. in North-West Himalaya with particular reference to Kashmir

Present paper deals with 20 species of the genusArtemisia occurring in the North-West Himalaya. Chromosome counts are given for 18 species (for 3 species for the first time). Two new species,A. banihalensis (A. roxburghiana agg.) andA. cashemirica (A. parviflora agg.), are described.     

Revision of the Neotropical Genus Hemibidessus Zimmermann (Coleoptera: Dytiscidae: Hydroporinae: Bidessini)

The genus Hemibidessus Zimmermann, 1921 is revised. Six species are recognized in the genus. Two new species are described, H. spirodiscus sp. n. from Bolivia and H. spangleri sp. n. from Argentina. A key for identifying the species is presented. The female genitalia are thoroughly illustrated and described for the first time for any species of Bidessini. Other important diagnostic structures are also illustrated including the male genitalia. A cladistic analysis is presented for 8 species (6 ingroup and 2 outgroup species) and 13 characters. A single most parsimonious cladogram was found.     

Biodiversity of Asterina species on Neotropical host plants: new species and records from Panama

Two new species of the genus Asterina are described from living leaves collected in provinces Chiriquí and Bocas del Toro in western Panama. Asterina alloplecti on Alloplectus ichtyoderma (Gesneriaceae) differs from other Asterina on Gesneriaceae by its stalked appressoria and host relationship. Asterina compsoneurae on Compsoneura sprucei (Myristicaceae) can be distinguished from other members of Asterina on Myristicaceae by its larger ascomata, larger, prominently spinose ascospores and host relationship. New records for Panama are Asterina corallopoda from a new host plant species (Solanum trizygum, Solanaceae), A. diplopoda, A. ekmanii from a new host plant species (Gonzalagunia rudis, Rubiaceae), A. siphocampyli from a new host plant genus and species (Burmeistera vulgaris, Campanulaceae) and A. styracina from a new host-plant species (Styrax argenteus, Styracaceae). This study increases the number of species of Asterina known for Panama from 12 to 19 and the number of Asterinaceae from 14 to 21. Asterina corallopoda, A. diplopoda, A. ekmanii, A. siphocampyli and A. styracina are illustrated for the first time. A phylogeny inferred from the analysis of LSU rDNA sequences of species of Asterina is presented. The diversity and host-plant patterns of known Neotropical species of Asterina are discussed.     

中国润刺蛾属系统分类研究(鳞翅目,刺蛾科)

整理出中国润刺蛾属Aphendala Walker共10种,包括2新种,拟灰润刺蛾A.pseudocana与叉茎润刺蛾A.furcillata,及1新纪录种,野润刺蛾A.aperiens(Walker)。编制了本属已知种的检索表,提供了视检种的成虫彩色照片和外生殖器特征图。模式标本保存在中国科学院动物研究所。     

A revision of the genus Nomocharis Franchet

SEALY, J. R, 1983. A revision of the genus Nomocharis Franchet. A taxonomic revision of the genus Nomocharis Franchet is presented, recognizing seven species. Notes are given on the species and hybrids in cultivation. A key for identification of the species and an index to specific epithets, including synonyms, are given, together with species excluded from the genus. Herbarium specimens are cited.     

Amphirosellinia gen. nov. and a new species of Entoleuca

The new genus Amphirosellinia is erected to include five xylariaceous fungi with erumpent or immersed perithecioid stromata. Amphirosellinia fushanensis, A. nigrospora and A. tennesseensis are newly described, whereas A. evansii and A. quercina are new combinations. Synnematous, geniculosporium-like anamorphs are known for A. fushanensis, A. nigrospora, A. tennesseensis and A. evansii; the anamorph of the latter species was produced on natural substratum, whereas those of the former three species were produced in culture. Dichotomous keys are presented for the Amphirosellinia species and for some genera that might be confused with Amphirosellinia. Entoleuca ellisii also is described as new. It readily can be separated from the known species in the genus by its smaller ascospore size range and short ascospore germ slit.     

SPECIES OF ANTITHAMNION (RHODOPHYCEAE,CERAMIACEAE) OCCURRING ON THE SOUTHEAST AFRICAN COAST (NATAL)1

Three species of Antithamnion Naegeli were previously known from Natal, all reported since 1984. A more thorough collection of the flora in recent months has revealed that there are nine species in Natal, four of which are newly described. Vegetative characteristics are emphasized in this study of the taxonomy of Antithamnion, the most important being (1) size of axial cells, (2) form of whorl-branchlets, (3) size of whorl-branchlet basal cells, (4) size and shape of whorl-branchlet terminal cells, (5) size and position of gland cells, (6) primary or secondary derivation of indeterminate lateral branches, and (7) the relationship of primary indeterminate branches, if present, to normal arrangement of whorl-branchlets. Two closely related species, A. diminuatum Wollaston and A. eliseae sp. nov. have been grown in laboratory culture allowing for testing of stability and reliability of vegetative characteristics for use in taxonomic studies. Conclusions are that these criteria can be effectively used for these purposes. In addition to A. eliseae, A. nematocladellum, A. pterocladellum and A. adenocladellum also are described as new species. A tropical species previously known from the Caribbean and Red Seas, A. lherminieri Nasr, a species previously recorded from Japan, A. secundum Itono, a species previously known from California and Japan, A hubbsii Dawson, and two species from Australia, A. diminuatum Wollaston and A. divergens (J. Agardh) J. Agardh, are also described from Natal.     

中国海鼓虾科角鼓虾属分类研究(甲壳亚门,十足目)

对中国海鼓虾科角鼓虾属系统分类进行了研究.角鼓虾全世界共记录34种,其中中国海记录了9种.本文中记录中国海分布的角鼓虾属Athanas 8种,其中对中国海2新纪录种A.polymorphus Kemp和A.squillophilus Hayashi,进行了描记,并提供了中国角鼓虾种检索表.在中国的材料中:A.japonicus、A.ohsimai、A.polymorphus及A.squillophilus 4种的螯足表现了多态性,A.ohsimai和A.squillophilus的螯足多态性也是首次发现和记载.所有研究测量标本均保存在中国科学院海洋研究所.