Long-term monitoring of the biomass and production of lipids by Nitzschia palea for biodiesel production

Pennate diatom Nitzschia palea can be cultured in outdoor vertical-bed photobioreactors to produce biodiesel. To assess the production of biomass and lipids, non-axenic cultures of Nitzschia palea were grown outdoors, and the growth of these cultures was measured biweekly. During the annual cycle of algal culture, the culture temperature ranged from 17.3 °C to 33.5 °C, the dry weight biomass ranged from 0.11 g l⁻¹ to 0.25 g l⁻¹, light energy] ranged from 1.94 Wm⁻² to 3.9 Wm⁻² and intracellular lipid content ranged from 7.1% to 11.4% of biomass weight after drying at 60 °C. Gas chromatography/mass spectroscopy (GC/MS) analysis of n-hexane extracts showed that the intracellular lipids were primarily C14:0 myristic acid (9.01%), C15:0 pentadecyclic acid (8.26%) and two types of C16:0, palmitic acid (41.13%) and palmitoleic acid (29.25%). Gel permeation analysis showed that carboxylic acids comprised 28.9% of lipids, 16.3% of monoglycerides, 27.3% of diglycerides and 24.3% of triglycerides. Alcoholysis of lipids resulted in the conversion of about 93.9% of fatty acids to equivalent fatty acid methyl esters (FAME) or biodiesel, which, on basis of wt%, consisted primarily of C15:0 methyl myristate (8.3%), C16:0 methyl pentadecanoate] (7.2%), C17:1methyl palmitoleate (28.7%) and methyl palimtate](39.8%).     

Quantification of algal biofilms colonising building materials: chlorophyll a measured by PAM-fluorometry as a biomass parameter

Abstract

The aim of this study was to quantify algal colonisation on anthropogenic surfaces (viz. building facades and roof tiles) using chlorophyll a (chl a) as a specific biomarker. Chl a was estimated as the initial fluorescence F₀ of ‘dark adapted’ algae using a pulse-modulated fluorometer (PAM-2000). Four isolates of aeroterrestrial green algae and one aquatic isolate were included in this study. The chl a concentration and F₀ showed an exponential relationship in the tested range between 0 and 400 mg chl a m^?2. The relationship was linear at chl a concentrations <20 mg m^?2. Exponential and linear models are presented for the single isolates with large coefficients of determination (exponential: r² > 0.94, linear: r² > 0.92). The specific power of this fluorometric method is the detection of initial algal colonisation on surfaces in thin or young biofilms down to 3.5 mg chl a m^?2, which corresponds to an abundances of the investigated isolates between 0.2 and 1.5 million cells cm^?2.     

Nitrogen fertilizer replacement indexes of legume cover crops in the derived savanna of West Africa

Legume cover crops are a potential means for overcoming N depletion in the derived savanna of West Africa. A 3-year trial was, therefore, conducted near Ibadan, southwestern Nigeria to measure the N contribution of 13 legume cover crops as compared to urea –N, using a N fertilizer replacement index for a maize test crop. Two series of trials involved the following legume cover crop species: Aeschynomene histrix, Centrosema brasilianum, Centrosema pascuorum, Chamaecrista rotundifolia, Cajanus cajan, Crotalaria verrucosa, Crotalaria ochroleuca, Lablab purpureus, Mucuna pruriens, Psophocarpus palustris, Pseudovigna argentea, Pueraria phaseoloides and Stylosanthes hamata. Trials were undertaken using a complete block design. Cover crops were planted in 1994 (Series 1) and 1995 (Series 2) in separate sites and each series was subsequently slashed and planted for one season with maize (Zea mays) in 1995 and 1996. At the 50% flowering stage, N concentration of above-ground vegetation of cover crops ranged from 21 to 38 g N kg^–1. Nitrogen accumulated by 4.5-month old cover crops ranged from 14 to 240 kg N ha^–1, depending on species and year. Cover crops increased grain yield of the subsequent maize crop by 25–136% over the control without N application. Nitrogen uptake by the maize crop was higher following cover crops than after maize or natural grass. The N fertilizer replacement index of cover crops for maize ranged from 11 (A. histrix) to 96 kg N ha^–1 (C. cajan) in Series 2. Perennial (C. brasilianum, S. hamata, C. cajan, P. phaseoloides and C. verrucosa) and annual (C. rotundifolia, M. pruriens, C. ochroleuca and L. purpureus) species could potentially save 50 to 100 kg N ha^–1 for maize crops. The cover crops accumulated more N in the wetter than in the drier year. However, the N fertilizer replacement index was higher for subsequent maize grown in the drier year. The cover crop-N recovery in maize was also higher than the urea-N uptake in the drier year. The N fertilizer replacement indexes can be predicted using the above-ground biomass amount of cover crops at 20 weeks after planting (drier year) or the N concentration at that stage (wetter year).     

Microalgae cultivation in air-lift reactors: modeling biomass yield and growth rate as a function of mixing frequency

The slow development of microalgal biotechnology stems from the failure in the design of large-scale photobioreactors where light energy is efficiently utilized. Due to the light gradient inside the reactor and depending on the mixing properties, algae are subjected to certain light/dark cycles where the light period is characterized by a light gradient. These light/dark cycles will determine productivity and biomass yield on light energy. Air-lift reactors can be used for microalgae cultivation and medium-frequency light/dark cycles will be found in these systems. Light/dark cycles are associated with two basic parameters: first, the light fraction, i.e., the ratio between the light period and the cycle time and second, the frequency of the light/dark cycle. In the present work, light/dark cycles found in air-lift reactors were simulated taking into account the light gradient during the light period. The effect of medium-frequency cycle time (10-100 s) and light fraction (0.1-1) on growth rate and biomass yield on light energy of the microalgae Dunaliella tertiolecta was studied. The biomass yield and growth rates were mainly affected by the light fraction, while cycle time had little influence. Response surface methodology was used and a statistical model describing the effect of light fraction and cycle time on growth rate and biomass yield on light energy was developed. The use of the model as a reactor design criterion is discussed.     

Multiple use of aquatic green biomass for food/feed protein concentrate, bioenergy and microbial fermentation products

Fractionation of aquatic green biomass of three water weeds for multiple use through yield of protein concentrate, fibrous residue and whey (deproteinised juice) has been studied. The potential of protein concentrate for use as food/feed supplement, that of fibrous residue as ensilaged fodder/substrate for mushroom growth/production of bioenergy and of whey as substrate for microbial fermentation has been studied and is discussed.     

水稻生物学产量及其构成性状的QTL定位

QTL的加性效应、加性×加性上位性效应及它们与环境的互作效应是数量性状的重要遗传分量.利用IR64/Azucena的125个DH品系为群体,分析了水稻生物学产量及其两个构成性状干草产量和谷粒产量的遗传组成.用基于混合模型的复合区间作图(MCIM)方法进行QTL定位.检测到12个位点有加性主效应,27个位点涉及双位点互作,18个位点存在环境互作.结果表明水稻生物学产量和它的两个构成性状普遍存在上位性效应和QE互作效应.此外,还探讨了性状间相关的遗传基础.发现4个QTLs和一对上位性QTLs可能与生物学产量与干草产量之间的正相关有关.3个QTL可能与干草产量与谷粒产量之间的负相关有关.这些结果可能部分地解释了这3个性状相关的遗传原因.通过对水稻生物学产量及其两个构成性状所定位QTL的分析,加深了对数量性状QTL的认识.首先,QTL的上位性效应和QE互作效应是普遍存在的;其次,QTL的多效性或紧密连锁可能是遗传相关的原因,当QTL对两个性状作用的方向相同时可导致正向遗传相关,反之则为负向遗传相关,当有些QTL表现为同向作用而另一些QTL表现为反向作用时,则可削弱性状间的遗传相关性;第三,复合性状的QTL效应可分解为其组成性状的QTL效应,如果QTL对各组成性状的效应方向相反而相互抵消,可使复合性状的QTL效应不易被检测;第四,加性效应的QTL常参预构成上位性效应,而具有上位性效应的QTL并非都有加性主效应,表明忽略上位性的QTL定位方法会降低检测QTL的功效;最后,鉴别不同类型的QTL效应有利于指导育种实践,选择主效QTL适用于多环境,QE互作QTL适用于特定环境,对上位性QTL应强调选择基因组合而并非单个基因.     

Potential trade‐offs of employing perennial biomass crops for the bioeconomy in the EU by 2050: Impacts on agricultural markets in the EU and the world

Perennial biomass crops (PBC) are considered a crucial feedstock for sustainable biomass supply to the bioeconomy that compete less with food production compared to traditional crops. However, large‐scale development of PBC as a means to reach greenhouse gas (GHG) mitigation targets would require not only the production on land previously not used for agriculture, but also the use of land that is currently used for agricultural production. This study aims to evaluate agricultural market impacts with biomass demand for food, feed, and PBC in four bioeconomy scenarios (“Business as usual,” “Improved relevance of bioeconomy,” “Extensive transformation to a bioeconomy,” “Extensive transformation to a bioeconomy with diet change”) to achieve a 75% GHG reduction target in the emission trading sector of the EU until 2050. We simulated bioeconomy scenarios in the energy system model TIMES‐PanEU and the agricultural sector model ESIM and conducted a sensitivity analysis considering crop yields, PBC yields, and land use options of PBC. Our results show that all bioeconomy scenarios except the one with diet change lead to increasing food prices (the average food price index increases by about 11% in the EU and 2.5%–3.0% in world markets). A combination of the transformation to a bioeconomy combined with diet change toward less animal protein in the EU is the only scenario that results in only moderately increasing food prices within the EU (+3.0%) and even falling global food prices (–6.4%). In addition, crop yield improvement and cultivation of PBC on marginal land help to reduce increases in food prices, but higher land prices are inevitable because those measures have only small effects on sparing agricultural land for PBC. For a transition to a bioeconomy that acknowledges climate mitigation targets, counter‐measures for those substantial direct and indirect impacts on agricultural markets should be taken into account.     

Evaluation of Seven Function-Known Candidate Genes for their Effects on Improving Drought Resistance of Transgenic Rice under Field Conditions

Many stress responsive genes have been reported with an effect on improving stress resistance in model plants under greenhouse conditions. Towards identification of genes for drought resistance breeding, seven well documented genes （CBF3, SOS2, NCED2, NPK1, LOSS, ZAT10, and NHX1） in stress resistance were selected in this study and transformed into rice cultivar Zhonghua 11 under the control of constitutive promoter Actinl and stress-inducible pro- moter of a rice HVA22 homolog, and transgenic rice were tested for drought resistance under field conditions. A total of 1598 independent transgenic To plants were generated. The percentages of single copy and expression of the transgenes were 36.7% and 57.6%, respectively. For each gene construct, 30 T1 families with expression of transgene were selected for drought resistance testing at the reproductive stage in field, and 10 of them were tested in PVC pipes with a defined stress protocol at the same stage. Relative yield and relative spikelet fertility were used as two major criteria to evaluate drought resistance performance because significantly decreased yield was observed in the T1 generation, Trans- genic families of eight constructs （HVA22P：CBF3, HVA22P：NPK1, Actin 1：LOS5, HVA22P：L OS5, Actin 1：ZA T10, HVA22P：ZA T10, Actinl：NHX1, and HVA22P：NHX1） showed significantly higher RY than wild-type （WT） under both drought stress field and PVC tube conditions. Transgenic families of 9 constructs （HVA22P.SOS2 and CBF3, LOS5, ZAT10, and NHX1 by both promoters） showed significantly higher relative spikelet fertility than WT in the field or PVC pipes. In the field drought resistance testing of T2 families derived from the T1 families with relatively lower yield decrease, transgenic families of seven constructs （HVA22P：CBF3, Actinl：NPK1, HVA22P：NPK1, Actinl：LOS5, HVA22P：LOS5, Actin1：ZAT10, and HVA22P：ZAT10） showed significantly higher yield per plant than WT, and families of nine constructs （Actinl：CBF3, HVA22P：CBF3,     

The cultivation of marine amphipods and their use as food for young salmonids

Populations of the amphipod, Anisogammarus pugettensis (Dana) 1853, can be raised for several generations under laboratory conditions. Compared with the growth of another amphipod, Eogammarus confervicolus Stimpson 1856, A. pugettensis grew more rapidly to maximum biomass and reached a new generation earlier when both were grown under their optimal growth conditions. A. pugettensis grew faster in upwelled impoundments containing epiphytic diatoms than under laboratory conditions. In fish feeding studies, the amphipod E. confervicolus is an adequate diet for salmonid growth when compared with Oregon moist pellets.     

丹参高产栽培优化配方施肥技术研究

采用N、P二因素五水平和N、P、K三因素五水平最优设计,在陕西商洛进行了丹参的氮磷钾肥施用量及配比试验研究。求得丹参NP和NPK的肥效反应数学模型,通过模拟选优,提出了丹参El标产量在5000～5700kg／hm^2之间的N、P用量是N115．5～214．3kg／hm^2,P2O5用量是153．4～243．4kg／hm^2(N：P2O5=1：1．15)。丹参目标产量在8000～9500kg／hm^2之间的N、P、K施肥用量N133．8～207．5kg／hm^2,P2O5用量是68．25～115．8kg／hm^2,K2O用量是80．3～146．5kg／hm^2(N：P2O5：K2O=1：0．54：0．67)。     

Benthos as the basis for arctic lake food webs

Plankton have traditionally been viewed as the basis for limnetic food webs, with zooplankton acting as a gateway for energy passing between phytoplanktonic primary producers and fish. Often, benthic production has been considered to be important primarily in shallow systems or as a subsidy to planktonic food web pathways. Stable isotope food web analyses of two arctic lakes (NE14 and I minus) in the Toolik Lake region of Alaska indicate that benthos are the primary source of carbon for adults of all species of benthic and pelagic fish present. We found no effect of turbidity, which may suppress benthic algae by shading, on food web structure. Even though Secchi transparency varied from 10.2 m in NE14 to 0.55–2.6 m in I minus, food webs in both lakes were based upon benthos, had four trophic levels, and culminated with omnivorous lake trout. We suggest that the importance of benthos in the food webs of these lakes is due to their extreme oligotrophy, resulting in planktonic resources that are insufficient for the support of planktivorous consumers.     

Nutritional and phytochemical value of Brassica crops from the agri‐food perspective

Brassica foods are among the top 10 economic crops in the world (i.e. broccoli, kale, cauliflower and Chinese cabbage). These vegetables have been identified as important components of a healthy diet because of their high levels of nutrients and health‐promoting phytochemicals (i.e. phenolics, glucosinolates, vitamins and minerals). Epidemiological studies have shown that increased consumption of Brassica foods is strongly associated with a reduced risk of degenerative diseases, cancer, cardiovascular disease and immune dysfunction. Nevertheless, the nutritional content and profile in Brassica vegetables have been reported to vary considerably during the growth period due to agronomical factors including light, temperature, water availability and soil fertility among others. Moreover, the conditions of postharvest processing and cooking are also important factors on food quality. A better understanding of specific preharvest and postharvest conditions is essential to improve cultivars with value‐added nutritional quality. Thus, in this article are going to be addressed the effects of the most common crop management strategies and processes on the variation of nutritive compounds present within Brassica from the agri‐food perspective.     

Intraspecific variation in the response of rice (Oryza sativa) to increased CO2– photosynthetic, biomass and reproductive characteristics

Two rice ( Oryza sativa L.) cultivars of contrasting morphologies, IR-36 and Fujiyama-5, were exposed to ambient (360 μl l⁻¹) and ambient plus 300 μl l⁻¹ CO₂ from time of emergence until ca 50% grain fill at the Duke University Phytotron, Durham, North Carolina. Exposure to increased CO₂ resulted in about a 50% increase in the photosynthetic rate for both cultivars and photosynthetic enhancement was still evident after 3 months of exposure to a high CO₂ environment. The photosynthetic response at 5% CO₂ and the response of CO₂ assimilation (A) to internal CO₂ (C_i) suggest a reallocation of biochemical resources from RuBP carboxylation to RuBP regeneration. Increases in total plant biomass at elevated CO₂ were approximately the same in both cultivars, although differences in allocation patterns were noted in root/shoot ratio. Differences in reproductive characteristics were also observed between cultivars at an elevated CO₂ environment with a significant increase in harvest index for IR-36 but not for Fujiyama-5. Changes in carbon allocation in reproduction between these two cultivars suggest that lines of rice could be identified that would maximize reproductive output in a future high CO₂ environment.     

The use of Artemia biomass sampling to predict cyst yields in culture ponds

The possibility of using biomass volume (= mean biomass present in the pond.week ^–1) to predict the total amount of harvestable cysts (= kg wet weight collected. week ^–1) produced in a culture pond by an Artemia franciscana population using a mixed model regression was evaluated for two different sampling methods; horizontal transects and vertical point samples. For transects, the following equation was found: `log (0.01 + cyst yields) = –2.05 + 0.025<sup>*</sup>(biomass volume)' with F <sub>(1, 4.87)</sub> = 8.83 and p = 0.032. For the point samples, the regression was also significant with F <sub>(1, 55.2)</sub> = 13.62 and p = 0.0005 for following equation: `log (0.01 + cyst yield) = –3.613 + 0.021^*(biomass volume). As pond effect and interaction terms did not significantly explain a significant portion of the variance for either of the sampling methods (Transects: pond: F _{(3, 14.3)} = 2.48; p = 0.103; pond^*biomass volume: F _{(3, 3.61)} = 4.63; p = 0.0976; Point samples: pond: F _{(3, 44.5)} = 0.00; p = 0.999; pond^*biomass volume: F _{(3, 44.2)} = 0.11; p = 0.954 ), the variable pond (repeated measurement factor) was not included in the final calculations for the regression equations. Although a combination of factors influences the equation, the high significance levels of the regression indicate biomass volume can be safely used to predict production trends. The low investment requirements of this method make it especially attractive for on farm use, where correctly determining the point of cyst decline will help farmers to allocate resources where needed.     

Separation of components of the biomass from high rate algal ponds using PercollR density gradient centrifugation

The biomass of a High Rate Algal Pond was separated into individual components of algae, bacteria and detritus. The two stage technique involved mechanical and chemical disaggregation of concentrated pond samples, followed by separation on preformed Percoll^R/sucrose density gradients. Throughout a diurnal cycle, monitored in September 1990, between 85 and 90% of the total chlorophylla was recovered in the algal fraction. The greatest loss of chlorophyll from the sample occurred during the concentration stage; no further losses were encountered during physical and chemical disaggregation. The technique enabled the direct gravimetric determination of the separated algal biomass. The potential applications of the technique are discussed.     

Quantifying plant biomass and seed production in camelina (Camelina sativa (L.) Crantz) across a large range of plant densities: Modelling approaches

To date, there has been little agreement on supporting the hypothesis that how some key vegetative traits of camelina (Camelina sativa (L.) Crantz var. ‘Soheil’) are dependent on plant biomass. Therefore, the main aim of this investigation was to quantify the relationship between the size of camelina plants and seed production across a broad-range of plant densities through modelling approaches. To make a wide range of plant densities, a fan design was used in eight replicates in an experimental field at Sari Agricultural Sciences and Natural Resources University, Iran. To quantify the relation between plant density and other plant traits, a regression analysis was carried out and the coefficient of determination (R²) was considered to evaluate the goodness of fit model. A power model (y = ax^b) could describe well the relationship between plant density (ranged 113–2905 plants m⁻²) and plant biomass, seed production, number of seeds per plant, stem diameter, and siliques number, with the coefficient of determination (R²) values of 0.85, 0.87, 0.65, 0.64, and 0.90, respectively. The harvest indexes were 13.8%–26.9%, depending on plant density. Seed production per plant was positively correlated to the siliques number (r = 0.85), the branch number (r = 0.80), and the seed number (r = 0.99) which could be key components of camelina seed production per plant. Furthermore, no significant correlation was found among plant height, thousand-seed weight, and harvest index with seed production per plant. In conclusion, plant biomass could be considered an important trait to predict plant growth models of camelina. Also, a lower plant density of camelina can be compensated by a greater number of siliques, branches and seeds per plant.     

Genome-wide Investigation of Intron Length Polymorphisms and Their Potential as Molecular Markers in Rice (Oryza sativa L.)

Intron length polymorphisms (ILPs) have been used as geneticmarkers in some studies. However, a systematic investigationand large-scale exploitation of ILP markers has not been reported.In this study, we performed a genome-wide search of ILPs betweentwo subspecies (indica and japonica) in rice using the draftgenomic sequences of cultivars 93-11 (indica) and Nipponbare(japonica) and 32 127 full-length cDNA sequences of Nipponbareobtained from public databases. We identified 13 308 putativeILPs. Based on these putative ILPs, we developed 5811 candidateILP markers via electronic-PCR with primers designed in flankingexons. We further conducted experiment to verify the candidateILP markers. Out of 215 candidate ILP markers tested on 93-11,Nipponbare and their hybrid, we successfully exploited 173 codominantILP markers. Further analyses on 10 rice accessions showed thatthese ILP markers were widely applicable and most (71.1%) exhibitedsubspecies specificity. This feature suggests that ILPs wouldbe useful for the studies of genome evolution and inter-subspeciesheterosis and for cross-subspecies marker-assisted selectionin rice. In addition, by testing 51 pairs of the ILP primerson five Gramineae plants and three dicot plants, we found anotherdesirable characteristic of rice ILP markers that they havehigh transferability to other plants.     

Submergence tolerance of rice – A new glasshouse method for the experimental submergence of plants

A new method is described for evaluation of submergence tolerance of rice ( Oryza sativa L.) plants. Responses of a range of cultivars corresponded with known differences in field performance. The method 1) allows fast and effective determination of submergence tolerance, 2) allows screening of many plants in a small glasshouse area, 3) provides for recovery of superior plants for seed collection, 4) allows manipulation of many environmental variables to mimic the natural submergence environment, and 5) uses simple, inexpensive, readily available equipment. Physiological studies performed with this method gave results similar to those obtained from field studies and showed that submergence tolerance increased in older plants; it decreased with increasing depth, increasing temperature and with high or low light levels. The system is ideal for the rapid evaluation of rice germplasm under controlled conditions and physiological studies on the mechanism of rice submergence tolerance.     

The effects of organic and inorganic fertilizer applications to Miscanthus×giganteus,Arundo donax and Phalaris arundinacea,when grown as energy crops in Wales,UK

Two pot trials and one field trial were established to investigate the effects of organic and inorganic fertilizer applications to energy crops grown in mid‐Wales. Chicken litter and sewage cake applied at a high level in excess of MAFF recommendations produced an increased yield response in Miscanthus and Arundo plants. Miscanthus plants exhibited an increased growth response to all fertilizers applied in its second year. Fertilizer applications in accordance with MAFF recommendations produced no significant differences in yields for Miscanthus or Arundo potted plants. In the field there was an increased yield response of Miscanthus to inorganic nitrogen applications compared with organic manures, but not with control plots. Analysis of the Miscanthus plant material at harvest showed significant differences in the nitrogen, potassium and copper content between treatments. No mineral content differences were shown for Miscanthus rhizome material or Arundo plant material. The Phalaris plants did not exhibit significant differences in growth or yield parameters, but their plant matter showed differences in nitrogen, phosphorus, potassium, calcium, sulphur and boron content between treatments.