Nitrogen fertilizer replacement indexes of legume cover crops in the derived savanna of West Africa

Legume cover crops are a potential means for overcoming N depletion in the derived savanna of West Africa. A 3-year trial was, therefore, conducted near Ibadan, southwestern Nigeria to measure the N contribution of 13 legume cover crops as compared to urea –N, using a N fertilizer replacement index for a maize test crop. Two series of trials involved the following legume cover crop species: Aeschynomene histrix, Centrosema brasilianum, Centrosema pascuorum, Chamaecrista rotundifolia, Cajanus cajan, Crotalaria verrucosa, Crotalaria ochroleuca, Lablab purpureus, Mucuna pruriens, Psophocarpus palustris, Pseudovigna argentea, Pueraria phaseoloides and Stylosanthes hamata. Trials were undertaken using a complete block design. Cover crops were planted in 1994 (Series 1) and 1995 (Series 2) in separate sites and each series was subsequently slashed and planted for one season with maize (Zea mays) in 1995 and 1996. At the 50% flowering stage, N concentration of above-ground vegetation of cover crops ranged from 21 to 38 g N kg^–1. Nitrogen accumulated by 4.5-month old cover crops ranged from 14 to 240 kg N ha^–1, depending on species and year. Cover crops increased grain yield of the subsequent maize crop by 25–136% over the control without N application. Nitrogen uptake by the maize crop was higher following cover crops than after maize or natural grass. The N fertilizer replacement index of cover crops for maize ranged from 11 (A. histrix) to 96 kg N ha^–1 (C. cajan) in Series 2. Perennial (C. brasilianum, S. hamata, C. cajan, P. phaseoloides and C. verrucosa) and annual (C. rotundifolia, M. pruriens, C. ochroleuca and L. purpureus) species could potentially save 50 to 100 kg N ha^–1 for maize crops. The cover crops accumulated more N in the wetter than in the drier year. However, the N fertilizer replacement index was higher for subsequent maize grown in the drier year. The cover crop-N recovery in maize was also higher than the urea-N uptake in the drier year. The N fertilizer replacement indexes can be predicted using the above-ground biomass amount of cover crops at 20 weeks after planting (drier year) or the N concentration at that stage (wetter year).     

Multiple use of aquatic green biomass for food/feed protein concentrate, bioenergy and microbial fermentation products

Fractionation of aquatic green biomass of three water weeds for multiple use through yield of protein concentrate, fibrous residue and whey (deproteinised juice) has been studied. The potential of protein concentrate for use as food/feed supplement, that of fibrous residue as ensilaged fodder/substrate for mushroom growth/production of bioenergy and of whey as substrate for microbial fermentation has been studied and is discussed.     

水稻生物学产量及其构成性状的QTL定位

QTL的加性效应、加性×加性上位性效应及它们与环境的互作效应是数量性状的重要遗传分量.利用IR64/Azucena的125个DH品系为群体,分析了水稻生物学产量及其两个构成性状干草产量和谷粒产量的遗传组成.用基于混合模型的复合区间作图(MCIM)方法进行QTL定位.检测到12个位点有加性主效应,27个位点涉及双位点互作,18个位点存在环境互作.结果表明水稻生物学产量和它的两个构成性状普遍存在上位性效应和QE互作效应.此外,还探讨了性状间相关的遗传基础.发现4个QTLs和一对上位性QTLs可能与生物学产量与干草产量之间的正相关有关.3个QTL可能与干草产量与谷粒产量之间的负相关有关.这些结果可能部分地解释了这3个性状相关的遗传原因.通过对水稻生物学产量及其两个构成性状所定位QTL的分析,加深了对数量性状QTL的认识.首先,QTL的上位性效应和QE互作效应是普遍存在的;其次,QTL的多效性或紧密连锁可能是遗传相关的原因,当QTL对两个性状作用的方向相同时可导致正向遗传相关,反之则为负向遗传相关,当有些QTL表现为同向作用而另一些QTL表现为反向作用时,则可削弱性状间的遗传相关性;第三,复合性状的QTL效应可分解为其组成性状的QTL效应,如果QTL对各组成性状的效应方向相反而相互抵消,可使复合性状的QTL效应不易被检测;第四,加性效应的QTL常参预构成上位性效应,而具有上位性效应的QTL并非都有加性主效应,表明忽略上位性的QTL定位方法会降低检测QTL的功效;最后,鉴别不同类型的QTL效应有利于指导育种实践,选择主效QTL适用于多环境,QE互作QTL适用于特定环境,对上位性QTL应强调选择基因组合而并非单个基因.     

The cultivation of marine amphipods and their use as food for young salmonids

Populations of the amphipod, Anisogammarus pugettensis (Dana) 1853, can be raised for several generations under laboratory conditions. Compared with the growth of another amphipod, Eogammarus confervicolus Stimpson 1856, A. pugettensis grew more rapidly to maximum biomass and reached a new generation earlier when both were grown under their optimal growth conditions. A. pugettensis grew faster in upwelled impoundments containing epiphytic diatoms than under laboratory conditions. In fish feeding studies, the amphipod E. confervicolus is an adequate diet for salmonid growth when compared with Oregon moist pellets.     

Evaluation of Seven Function-Known Candidate Genes for their Effects on Improving Drought Resistance of Transgenic Rice under Field Conditions

Many stress responsive genes have been reported with an effect on improving stress resistance in model plants under greenhouse conditions. Towards identification of genes for drought resistance breeding, seven well documented genes （CBF3, SOS2, NCED2, NPK1, LOSS, ZAT10, and NHX1） in stress resistance were selected in this study and transformed into rice cultivar Zhonghua 11 under the control of constitutive promoter Actinl and stress-inducible pro- moter of a rice HVA22 homolog, and transgenic rice were tested for drought resistance under field conditions. A total of 1598 independent transgenic To plants were generated. The percentages of single copy and expression of the transgenes were 36.7% and 57.6%, respectively. For each gene construct, 30 T1 families with expression of transgene were selected for drought resistance testing at the reproductive stage in field, and 10 of them were tested in PVC pipes with a defined stress protocol at the same stage. Relative yield and relative spikelet fertility were used as two major criteria to evaluate drought resistance performance because significantly decreased yield was observed in the T1 generation, Trans- genic families of eight constructs （HVA22P：CBF3, HVA22P：NPK1, Actin 1：LOS5, HVA22P：L OS5, Actin 1：ZA T10, HVA22P：ZA T10, Actinl：NHX1, and HVA22P：NHX1） showed significantly higher RY than wild-type （WT） under both drought stress field and PVC tube conditions. Transgenic families of 9 constructs （HVA22P.SOS2 and CBF3, LOS5, ZAT10, and NHX1 by both promoters） showed significantly higher relative spikelet fertility than WT in the field or PVC pipes. In the field drought resistance testing of T2 families derived from the T1 families with relatively lower yield decrease, transgenic families of seven constructs （HVA22P：CBF3, Actinl：NPK1, HVA22P：NPK1, Actinl：LOS5, HVA22P：LOS5, Actin1：ZAT10, and HVA22P：ZAT10） showed significantly higher yield per plant than WT, and families of nine constructs （Actinl：CBF3, HVA22P：CBF3,     

Benthos as the basis for arctic lake food webs

Plankton have traditionally been viewed as the basis for limnetic food webs, with zooplankton acting as a gateway for energy passing between phytoplanktonic primary producers and fish. Often, benthic production has been considered to be important primarily in shallow systems or as a subsidy to planktonic food web pathways. Stable isotope food web analyses of two arctic lakes (NE14 and I minus) in the Toolik Lake region of Alaska indicate that benthos are the primary source of carbon for adults of all species of benthic and pelagic fish present. We found no effect of turbidity, which may suppress benthic algae by shading, on food web structure. Even though Secchi transparency varied from 10.2 m in NE14 to 0.55–2.6 m in I minus, food webs in both lakes were based upon benthos, had four trophic levels, and culminated with omnivorous lake trout. We suggest that the importance of benthos in the food webs of these lakes is due to their extreme oligotrophy, resulting in planktonic resources that are insufficient for the support of planktivorous consumers.     

Intraspecific variation in the response of rice (Oryza sativa) to increased CO2– photosynthetic, biomass and reproductive characteristics

Two rice ( Oryza sativa L.) cultivars of contrasting morphologies, IR-36 and Fujiyama-5, were exposed to ambient (360 μl l⁻¹) and ambient plus 300 μl l⁻¹ CO₂ from time of emergence until ca 50% grain fill at the Duke University Phytotron, Durham, North Carolina. Exposure to increased CO₂ resulted in about a 50% increase in the photosynthetic rate for both cultivars and photosynthetic enhancement was still evident after 3 months of exposure to a high CO₂ environment. The photosynthetic response at 5% CO₂ and the response of CO₂ assimilation (A) to internal CO₂ (C_i) suggest a reallocation of biochemical resources from RuBP carboxylation to RuBP regeneration. Increases in total plant biomass at elevated CO₂ were approximately the same in both cultivars, although differences in allocation patterns were noted in root/shoot ratio. Differences in reproductive characteristics were also observed between cultivars at an elevated CO₂ environment with a significant increase in harvest index for IR-36 but not for Fujiyama-5. Changes in carbon allocation in reproduction between these two cultivars suggest that lines of rice could be identified that would maximize reproductive output in a future high CO₂ environment.     

The use of Artemia biomass sampling to predict cyst yields in culture ponds

The possibility of using biomass volume (= mean biomass present in the pond.week ^–1) to predict the total amount of harvestable cysts (= kg wet weight collected. week ^–1) produced in a culture pond by an Artemia franciscana population using a mixed model regression was evaluated for two different sampling methods; horizontal transects and vertical point samples. For transects, the following equation was found: `log (0.01 + cyst yields) = –2.05 + 0.025<sup>*</sup>(biomass volume)' with F <sub>(1, 4.87)</sub> = 8.83 and p = 0.032. For the point samples, the regression was also significant with F <sub>(1, 55.2)</sub> = 13.62 and p = 0.0005 for following equation: `log (0.01 + cyst yield) = –3.613 + 0.021^*(biomass volume). As pond effect and interaction terms did not significantly explain a significant portion of the variance for either of the sampling methods (Transects: pond: F _{(3, 14.3)} = 2.48; p = 0.103; pond^*biomass volume: F _{(3, 3.61)} = 4.63; p = 0.0976; Point samples: pond: F _{(3, 44.5)} = 0.00; p = 0.999; pond^*biomass volume: F _{(3, 44.2)} = 0.11; p = 0.954 ), the variable pond (repeated measurement factor) was not included in the final calculations for the regression equations. Although a combination of factors influences the equation, the high significance levels of the regression indicate biomass volume can be safely used to predict production trends. The low investment requirements of this method make it especially attractive for on farm use, where correctly determining the point of cyst decline will help farmers to allocate resources where needed.     

Separation of components of the biomass from high rate algal ponds using PercollR density gradient centrifugation

The biomass of a High Rate Algal Pond was separated into individual components of algae, bacteria and detritus. The two stage technique involved mechanical and chemical disaggregation of concentrated pond samples, followed by separation on preformed Percoll^R/sucrose density gradients. Throughout a diurnal cycle, monitored in September 1990, between 85 and 90% of the total chlorophylla was recovered in the algal fraction. The greatest loss of chlorophyll from the sample occurred during the concentration stage; no further losses were encountered during physical and chemical disaggregation. The technique enabled the direct gravimetric determination of the separated algal biomass. The potential applications of the technique are discussed.     

Genome-wide Investigation of Intron Length Polymorphisms and Their Potential as Molecular Markers in Rice (Oryza sativa L.)

Intron length polymorphisms (ILPs) have been used as geneticmarkers in some studies. However, a systematic investigationand large-scale exploitation of ILP markers has not been reported.In this study, we performed a genome-wide search of ILPs betweentwo subspecies (indica and japonica) in rice using the draftgenomic sequences of cultivars 93-11 (indica) and Nipponbare(japonica) and 32 127 full-length cDNA sequences of Nipponbareobtained from public databases. We identified 13 308 putativeILPs. Based on these putative ILPs, we developed 5811 candidateILP markers via electronic-PCR with primers designed in flankingexons. We further conducted experiment to verify the candidateILP markers. Out of 215 candidate ILP markers tested on 93-11,Nipponbare and their hybrid, we successfully exploited 173 codominantILP markers. Further analyses on 10 rice accessions showed thatthese ILP markers were widely applicable and most (71.1%) exhibitedsubspecies specificity. This feature suggests that ILPs wouldbe useful for the studies of genome evolution and inter-subspeciesheterosis and for cross-subspecies marker-assisted selectionin rice. In addition, by testing 51 pairs of the ILP primerson five Gramineae plants and three dicot plants, we found anotherdesirable characteristic of rice ILP markers that they havehigh transferability to other plants.     

Potential of termite-based biomass pre-treatment strategies for use in bioethanol production

Abstract When considering the current state of the biorefinery industry, it is readily apparent that industrial cellulose and hemicellulose digestion processes are relatively advanced, whereas enzymatic pre-treatment strategies for biomass delignification and cellulose solubilization are not well developed. The need for efficient biomass pre-treatment strategies presents a significant opportunity for researchers studying lignocellulose digestion in termites and other insects. With an emphasis on industrial biomass pre-treatment, this review provides an overview of: (i) industrial biorefining operations (feedstocks, processing, and economics); (ii) recent findings from termite research that have revealed candidate enzymes; and (iii) research needs and opportunities for consideration by entomologists working in this area. With respect to research findings, recently identified candidate lignases (laccases, catalases, peroxidases, esterases), other potentially important detoxification enzymes (cytochrome P450, superoxide dismutase), and phenolic acid esterases (carboxylesterases) that may assist in hemicellulose solubilization are overviewed. Regarding research needs and opportunities, several approaches for identification of candidate pre-treatment enzymes from upstream, symbiont-free gut regions are also described.     

The effects of organic and inorganic fertilizer applications to Miscanthus×giganteus,Arundo donax and Phalaris arundinacea,when grown as energy crops in Wales,UK

Two pot trials and one field trial were established to investigate the effects of organic and inorganic fertilizer applications to energy crops grown in mid‐Wales. Chicken litter and sewage cake applied at a high level in excess of MAFF recommendations produced an increased yield response in Miscanthus and Arundo plants. Miscanthus plants exhibited an increased growth response to all fertilizers applied in its second year. Fertilizer applications in accordance with MAFF recommendations produced no significant differences in yields for Miscanthus or Arundo potted plants. In the field there was an increased yield response of Miscanthus to inorganic nitrogen applications compared with organic manures, but not with control plots. Analysis of the Miscanthus plant material at harvest showed significant differences in the nitrogen, potassium and copper content between treatments. No mineral content differences were shown for Miscanthus rhizome material or Arundo plant material. The Phalaris plants did not exhibit significant differences in growth or yield parameters, but their plant matter showed differences in nitrogen, phosphorus, potassium, calcium, sulphur and boron content between treatments.     

An integrated biogeochemical and economic analysis of bioenergy crops in the Midwestern United States

This study integrates a biophysical model with a county‐specific economic analysis of breakeven prices of bioenergy crop production to assess the biophysical and economic potential of biofuel production in the Midwestern United States. The bioenergy crops considered in this study include a genotype of Miscanthus, Miscanthus×giganteus, and the Cave‐in‐Rock breed of switchgrass (Panicum virgatum). The estimated average peak biomass yield for miscanthus in the Midwestern states ranges between 7 and 48 metric tons dry matter per hectare per year ( t DM ha^?1 yr^?1), while that for switchgrass is between 10 and 16 t DM ha^?1 yr^?1. With the exception of Minnesota and Wisconsin, where miscanthus yields are likely to be low due to cold soil temperatures, the yield of miscanthus is on average more than two times higher than yield of switchgrass. We find that the breakeven price, which includes the cost of producing the crop and the opportunity cost of land, of producing miscanthus ranges from $53 t^?1 DM in Missouri to $153 t^?1 DM in Minnesota in the low‐cost scenario. Corresponding costs for switchgrass are $88 t^?1 DM in Missouri to $144 t^?1 DM in Minnesota. In the high‐cost scenario, the lowest cost for miscanthus is $85 t^?1 DM and for switchgrass is $118 t^?1 DM, both in Missouri. These two scenarios differ in their assumptions about ease of establishing the perennial crops, nutrient requirements and harvesting costs and losses. The differences in the breakeven prices across states and across crops are mainly driven by bioenergy and row crop yields per hectare. Our results suggest that while high yields per unit of land of bioenergy crops are critical for the competitiveness of bioenergy feedstocks, the yields of the row crops they seek to displace are also an important consideration. Even high yielding crops, such as miscanthus, are likely to be economically attractive only in some locations in the Midwest given the high yields of corn and soybean in the region.     

In search of a thermodynamic description of biomass yields for the chemotrophic growth of microorganisms

Correlations for the prediction of biomass yields are valuable, and many proposals based on a number of parameters (Y(ATP), Y(Ave), eta(o), Y(c), Gibbs energy efficiencies, and enthalpy efficiencies) have been published. This article critically examines the properties of the proposed parameters with respect to the general applicability to chemotrophic growth systems, a clear relation to the Second Law of Thermodynamics, the absence of intrinsic problems, and a requirement of only black box information. It appears that none of the proposed parameters satisfies all these requirements. Particularly, the various energetic efficiency parameters suffer from major intrinsic problems. However, this article will show that the Gibbs energy dissipation per amount of produced biomass (kJ/C-mod) is a parameter which satisfies the requirements without having intrinsic problems. A simple correlation is found which provides the Gibbs energy dissipation/C-mol biomass as a function of the nature of the C-source (expressed as the carbon chain length and the degree of reduction). This dissipation appears to be nearly independent of the nature of the electron acceptor (e.g., O(2), No(3) (-), fermentation). Hence, a single correlation can describe a very wide range of microbial growth systems. In this respect, Gibbs energy dissipation is much more useful than heat production/C-mol biomass, which is strongly dependent on the electron acceptor used. Evidence is presented that even a net heat-uptake can occur in certain growth systems.The correlation of Gibbs energy dissipation thus obtained shows that dissipation/C-mol biomass increases for C-sources with smaller chain length (C(6) --> C(1)), and increases for both higher and lower degrees of reduction than 4. It appears that the dissipation/C-mol biomass can be regarded as a simple thermodynamic measure of the amount of biochemical "work" required to convert the carbon source into biomass by the proper irreversible carbon-carbon coupling and oxidation/reduction reactions. This is supported by the good correlation between the theoretical ATP requirement for biomass formation on different C-sources and the dissipation values (kJ/C-mol biomass) found. The established correlation for the Gibbs energy dissipation allows the prediction of the chemotrophic biomass yield on substrate with an error of 13% in the yield range 0.01 to 0.80 C-mol biomass/(C)-mol substrate for aerobic/anaerobic/denitrifying growth systems.     

Evaluation of Microcystis as food for zooplankton in a eutrophic lake

Four experiments were conducted to evaluate Microcystis as food for zooplankton in Lake Kasumigaura, and the following results were obtained. (1) Moina micrura (Cladocera) showed little growth and no reproduction when the animal was reared with Microcystis cultured in the laboratory. The animal did not grow nor reproduce well when Chlorella was mixed with Microcystis as food. (2) Moina micrura assimilated Microcystis much less than Chlorella when the animal fed on single species of Microcystis or a mixture with Chlorella. (3) Microcystis collected from Lake Kasumigaura could not be utilized by Moina micrura even though the colonies were broken up into edible sizes. However, the alga turned into utilizable food when it was decomposed. (4) No inhibitors of Moina micrura population growth could be found in the non-filtered water of Lake Kasumigaura where Microcystis was blooming heavily. Decomposed Microcystis seemed to be utilized by zooplankton as an important food source in Lake Kasumigaura.     

利用双单倍体群体剖析水稻产量及其相关性状的遗传基础

主效QTL、上位性效应和它们与环境的互作(QE)都是数量性状的重要遗传因素。利用籼粳交珍汕97／武育粳2号F1植株上的花药进行组织培养得到的190个双单倍体群体和179个微卫星标记,通过两年两重复田间试验,采用混合线性模型方法分析了9个控制水稻产量及其相关性状的遗传效应,得到57个主效QTL,41对上位性互作,8对QTL与环境的互作和7对上位性效应与环境的互作。单个主效QTL解释这些性状1．3％～25．8％的表型方差。各性状QTL的累积表型贡献率达11．5％～66．8％。大多数性状之间具有显著的表型相关性,相关性较高的性状之间常具有较多共同或紧密连锁的QTL。结果表明,基因的多效性或紧密连锁可能是性状相关的重要遗传基础。     

Preservation methods of <Emphasis Type="Italic">Tolypothrix tenuis</Emphasis> for use as a cyanobacterial fertilizer

The suitability of the cyanobacterium Tolypothrix tenuis as a potential biofertilizer was evaluated by measuring cell viability in stored samples preserved by various methods, including freezing at −20°C, freeze-drying, desiccation as flakes and immobilization in alginate beads. The viability recovery and the retained viability index (RVI₁₀) were used as indicators of cell survival after 3 and 15 months storage. The highest recovery level (85%) was obtained by freeze-drying using skimmed milk as the resuspension solution for long-term storage. Dried alginate beads showed a better cell survival (RVI₁₀ 0.25) than air-dried flakes (RVI₁₀ −0.63) after 15 months storage. However, desiccated flakes previously treated with Ca²⁺ and Mg²⁺ ions improved cell survival capacity at the longest period assayed (RVI₁₀ 0.08), extending cell viability by 9 months compared to dried-powder material.     

The accumulation of fixed biomass increases the observed growth yield of a nitrifying biofilm

The observed growth yield (Y _obs) of a nitrifying biofilm metabolizing ammonia in a continuous flow reactor was constant below a fixed biomass concentration of 40–50 g COD-biomass cm^–2. Beyond this range, an increased Y _obs with the additional accumulation of fixed biomass could be due to a considerable accumulation of inactive materials within the nitrifying biofilm.