Mass mortality of macrobenthic communities in the lagoon of Hikueru atoll (French Polynesia)

Epibenthic macrofauna communities (corals, molluscs, echinoderms, and macroalgae) were investigated at Hikueru Atoll, Tuamotu Archipelago. The very low diversity and abundance that we observed (1 coral genus, and 2 mollusc, 1 echinoderm, and 17 macroalgal species) is likely to be the result of a mass mortality event that occurred 18 months earlier. Hydrological surveys suggest that this high mortality was the result of a major dystrophic crisis. Other atoll lagoons in the Tuamotu Archipelago have also been affected by high mortalities in the past, but Hikueru appears to have been the most frequently and intensely affected. The present study confirms that mass mortalities associated with phytoplankton blooms may be one of the major disturbances affecting coral reef ecosystems. Accepted: 14 May 2000     

Replenishment of fish populations in the enclosed lagoon of Taiaro Atoll: (Tuamotu Archipelago, French Polynesia) evidence from eggs and larvae

 Taiaro Atoll Lagoon is normally isolated from the ocean, but at least 125 marine fish species of 31 families are present there. We sampled fish larvae in Taiaro Lagoon and the nearby ocean in February 1994 with plankton net, neuston net and light trap to investigate which taxa were completing their life cycles in the lagoon. Concentrations of fish eggs and larvae were very high in the lagoon indicating intense spawning, but larvae of only 18 taxa of 10 families were present. Only six, a callionymid, gobiids, a hemiramphid, a microdesmid, and two pomacentrids, were present across a full range of pelagic sizes, and were clearly completing their pelagic stage in the lagoon. Four other taxa, an apogonid, two labrids and a scarid, were common, but the largest individuals were small (<5 mm) postflexion larvae. These may have been completing their pelagic stage in the lagoon. The remaining lagoonal larvae (eight taxa) were rare and at the preflexion stage, so we could only conclude that they hatched from eggs spawned in the lagoon. Nineteen taxa of 15 families found as adults in the lagoon were present outside the lagoon as larvae, but not inside, suggesting that they may not normally complete their life cycles in the lagoon. Horizontal distributions of larvae in the lagoon are apparently due to the interaction of larval vertical distribution behaviour with a wind-driven countercurrent system. Accepted: 16 October 1996     

Characteristics of macrofauna and their response to aquiculture in Yueqing Bay, China

Four seasons of investigations on macrofauna in Yueqing Bay, China were carried out from August 2002 to May 2003. One hundred and twenty four species of macrofauna were identified, including 41 species of polychaeta, 37 species of mollusc, 22 species of crustacea, 10 species of echinoderm and 14 others. The average biomass was 41.95 g·m⁻² and the average density was 85 ind·m⁻². The echinoderm contributed the highest proportion (about 60%) to the total biomass, and the mollusc contributed the maximum proportion (about 35%) to the total density. Biomass and density in spring were higher than those in other seasons. This article analyzes the macrofauna distribution, compares the study results with the history data of Yueqing Bay and adjacent bays, and discusses the response of macrofauna community to the aquiculture in Yueqing Bay.     

Characteristics of macrofauna and their response to aquiculture in Yueqing Bay, China

Four seasons of investigations on macrofauna in Yueqing Bay, China were carried out from August 2002 to May 2003. One hundred and twenty four species of macrofauna were identified, including 41 species of polychaeta, 37 species of mollusc, 22 species of crustacea, 10 species of echinoderm and 14 others. The average biomass was 41.95 g·m^?2 and the average density was 85 ind·m^?2. The echinoderm contributed the highest proportion (about 60%) to the total biomass, and the mollusc contributed the maximum proportion (about 35%) to the total density. Biomass and density in spring were higher than those in other seasons. This article analyzes the macrofauna distribution, compares the study results with the history data of Yueqing Bay and adjacent bays, and discusses the response of macrofauna community to the aquiculture in Yueqing Bay.     

Palaeoenvironmental analysis based on rugose corals and microfacies: a case study at La Cornuda section (early Serpukhovian, Guadiato Area, SW Spain)

Combined analysis of microfacies and rugose coral features provides a useful tool for palaeoenvironmental studies in areas where outcrops are not appropriate for field observations. A detailed study of Serpukhovian rugose corals from La Cornuda section (Guadiato Area, SW Spain) by means of thin sections allowed the identification of environments where they lived. All corals were collected in unit 1 of the section where three different but intimately connected environments have been identified. Corals developed mainly in small mounds built jointly by microbial communities, algae and corals. Some corals also lived in calcareous shoals mainly composed of echinoderm plates. Finally, some corals occur in Oncoidal limestone that represents a shallow ramp, but they were mainly transported from shoals and mounds.     

Structure and diversity of shallow soft-bottom benthic macrofauna in the Gulf of Lions (NW Mediterranean)

Samples of soft-sediment macrobenthos from 92 sites between 10 and 50 m depth were used to assess (1) the main soft-bottom macrofauna communities in the Gulf of Lions, (2) the different components of the diversity of benthic macrofauna in this area, and (3) the relevance of the use of major taxonomic groups as surrogates for the analysis of the structure and diversity of total macrofauna. Three main communities were identified by cluster analysis and associated procedures. These communities corresponded well to the assemblages recently identified on the basis of polychaete composition. The α-diversity indices were in accordance with those reported for similar communities in the Mediterranean. Conversely, the β-diversity value was higher than the few other data available in the literature for marine soft-bottom macrofauna. The total number of species in the studied area estimated by the “total species accumulation curve” (TS) method was 2,319, which was only 10% higher than the number obtained by extrapolation of the species–area curve. The similarity matrix based on polychaetes correlated best with the one based on total macrofauna. Polychaetes and crustaceans were also the best surrogates of total macrofauna when assessing α-diversity (except in the case of Δ*). Conversely, molluscs were the best surrogates of total macrofauna β-diversity. Our results show that the choice of an optimal surrogate for total benthic macrofauna depends on the characteristic of the benthic macrofauna to be studied. Moreover, this choice is also dependent on the environment to be studied.     

Objectives and background to the 1994 Franco-Australian expedition to Taiaro Atoll (Tuamotu Archipelago, French Polynesia)

 The 9 km² uplifted lagoon of Taiaro Atoll (15°45′S, 144°38′W) is hypersaline due to its isolation from the ocean, yet it contains a high diversity of fish. The question unifying our expedition was to discover whether these assemblages could be self-sustaining despite very limited contact with the ocean. Although we were constrained by time, collections of fish larvae showed that some species can complete their life-cycle within the lagoon, while others differed genetically between the lagoon and the ocean, consistent with restricted gene flow. The lagoon contained few oceanic species of zooplankton, confirming its general isolation, but nevertheless some fish species may depend upon infrequent colonisation from the ocean (when large waves drive water over the normally dry reef crest). Isotopic signatures in fish otoliths suggest the basis for a more definitive and inclusive test of the sources of the lagoonal assemblage. Accepted: 28 August 1997     

Determinants of community structure for coral reef fishes in isolated coral heads at lagoonal and reef slope sites

Summary Ten small isolated corals were selected as units, of habitat in each of two nearby reef sites-a lagoon and a reef slope. On six occasions over two years we collected all fishes resident in each of these corals. Collections yielded 827 fishes of 64 species from the lagoon and 525 fishes of 66 species from the slope, but at each site 12 common species comprised over 80% of the fishes collected. We examined the distribution of species of fishes among units of habitat to assess the extent to which partitioning of habitat was being carried out. Results are compared with others previously reported from a reef flat site. Species discriminated among different types of habitat offered, but to a different degree in each site. Discrimination was most pronounced at the slope site where 7 of the 12 commonest species did not occur in all three types of habitat offered, and least at the lagoon site where no common species failed to occupy both types of habitat offered. No temporal partitioning of habitat could be demonstrated. Fish did not distribute themselves among units of habitat of one type by means of precise microhabitat discrimination. No pair of species in either site could be shown to mutually avoid, or exclude one another from habitat units. At all three sites, chance patterns of recruitment and loss overwhelmingly determined species composition of the groups of fishes coexisting in single habitat units. The significance of these results for our understanding of the ecology of coral reef fishes is discussed.     

Stable isotopes in fish otoliths discriminate between lagoonal and oceanic residents of Taiaro Atoll (Tuamotu Archipelago, French Polynesia)

 The fully enclosed Taiaro lagoon is hypersaline (42.5 psu) and non-tidal; constant salinity and water level result from strong evaporation balanced by low percolation through the lagoon floor. Seawater can flow over the atoll rim during exceptionally high seas and may then replenish lagoonal communities with propagules of oceanic origin. The distinctive water chemistry of the lagoon suggests a possible way of identifying these immigrants. We established this potential by analysing stable isotopes of carbon and oxygen in the recent growth layers of otoliths of two adult reef fishes, Chaetodon ulietensis and Acanthurus triostegus, collected from both sides of the atoll rim. Fish from the two locations were discriminated by their isotopic signatures, suggesting that analysis of the microchemical signatures deposited during the larval development could be used in future work to determine which individuals and species complete their life-cycles in this unusual lagoon. Accepted: 28 August 1997     

Tropical zooplankton in the highly-enclosed lagoon of Taiaro Atoll (Tuamotu Archipelago, French Polynesia)

 Nocturnal zooplankton assemblages around Taiaro Atoll were sampled over six nights during February 1994. Replicate zooplankton samples were collected at windward and leeward locations in the enclosed lagoon and adjacent ocean with a metered net (85 cm diameter, 500 μm mesh) towed for 15 min at 5 m depth. The zooplankton community in the lagoon was very different from that in the ocean. Oceanic samples contained 50 mostly holoplanktonic taxa (diversity index, H′=2.62; evenness index, J′=0.67). Lagoonal samples contained 19 mostly meroplanktonic taxa (H′=1.54, J′=0.52) with three taxa (decapod larvae; an ostracod, Cypridina sp.; a copepod, Acartia fossae) contributing >90% of the individuals. Unlike the ocean, zooplankton distributions in the lagoon were not homogenous; instead spatial patterns were apparently formed by the interaction between hydrodynamic processes and species-specific behaviour. Accepted: 28 August 1997     

Pleistocene mollusc assemblage in the slightly raised atoll lagoon of Niau (Tuamotu,French Polynesia)

Surveys conducted at Niau, a slightly raised atoll in the Tuamotu Archipelago, revealed a brackish community with only a few extant species of fishes, crustaceans and molluscs in the residual semi-enclosed lagoon. Dredging of superficial sediments near the Niau lagoon resulted in a rich shell mollusc assemblage with 120 species, dating from the Pleistocene Last Interglacial Maximum (120,000 years BP). The assemblage contains 3 previously described new species, collected nowhere else since, and 12 species locally extinct but extant in the Indo-Pacific. Results are compared with previous studies on Pleistocene reefs of the Indo-Pacific.     

Isotopic composition of the delta-18O--delta-13C from the otoliths of reef fish from Taiaro (Tuamotu, French Polynesia): isotopic and biological implications

Nuclei (larval stage) and outer parts (adult stage) of fish otoliths from the Taiaro closed lagoon (French Polynesia) and adjacent ocean have been analysed for the C-O isotopic compositions. delta 18O values of the nuclei of both populations indicate that isotopic equilibrium is reached. This implies that the lagoonal fish population has done its complete biological cycle in the lagoon and represents an adaptation in a closed system. delta 18O values of the outer parts show a slight isotopic disequilibrium (< 0.2@1000) interpreted in term of vital effect. All the delta 13C values exhibit a strong isotopic disequilibrium related to metabolic activity.     

Microbiome of juvenile corals in the outer reef slope and lagoon of the South China Sea: insight into coral acclimatization to extreme thermal environments

Environmental conditions between the outer reef slope (ORS) and lagoon in tropical atolls are significantly different, but the variations of juvenile coral-microbiomes in the two environments and their relationship with coral thermal acclimatization are poorly understood. We explored this issue based on local water conditions and the microbiome of juvenile corals in the ORS and lagoon in the central South China Sea. Coral-symbiotic Symbiodiniaceae showed significant differences among coral species; Pocillopora verrucosa and Pachyseris rugosa in the ORS, and Acropora formosa in the lagoon were dominated by Durusdinium, but other corals were dominated by Cladocopium. Although A. formosa in the ORS were dominated by Cladocopium (C3u), they were dominated by Durusdinium (D1/D1a) and Cladocopium (C50) in the lagoon. Other coral species were both dominated by Cladocopium in the lagoon and ORS. The relative abundance of bacteria in the Deinococcus–Thermus was generally higher in the lagoon corals than in the ORS corals. Our study indicates that P. verrucosa, P. rugosa and Porites lutea may have high thermal tolerance based on the relatively high abundance of heat-tolerant Durusdinium and Thermus scotoductus. Likewise, A. formosa in the lagoon may acclimatize to the thermal environment based on a high relative abundance of heat-tolerant Durusdinium.     

乐清湾大型底栖生物群落特征及其对水产养殖的响应

乐清湾大型底栖生物的四季采样研究。发现124种大型底栖生物,其中多毛类41种、软体动物37种、甲壳类22种、棘皮动物10种和其他类14种。乐清湾大型底栖生物年均生物量41．95g·m^-2年均密度85个·m^-2,生物量棘皮动物居首（约占60％）;密度软体动物最大（约占35％）。生物量和密度分布春季为最高。对乐清湾大型底栖生物分布现状与以往资料及邻近海湾进行了比较,并将大型底栖生物群落对乐清湾牡蛎养殖和网箱养殖的响应做了分析探讨。     

广东湛江红树林保护区大型底栖动物群落的空间分带

用生态样带研究了广东湛江红树林保护区高桥镇核心区大型底栖动物的空间分带。结果表明：德耀村红树剖面中出现的大型底栖动物优势种类为琵琶拟沼螺、悦目大眼蟹、扁平拟闭口蟹、宽身闭口蟹、黑口滨螺、等齿角沙蚕、弧边招潮和中华伪露齿螺。该剖面大型底栖动物从高潮位到低潮位可分为3个分布带：琵琶拟沼螺-弧边招潮-浓毛拟闭口蟹带;宽身闭口蟹．悦目大眼蟹．黑口滨螺带;扁平拟闭口蟹-珠带拟蟹手螺带。群落生物量的变化主要由软体动物所主导,栖息密度的变化主要由软体动物和甲壳动物所主导,多样性指数变化主要由软体动物所主导。红寨村红树剖面中出现的大型底栖动物优势种类为琵琶拟沼螺、蝼姑虾、扁平拟闭口蟹、宽身闭口蟹、耳螺科的一种、黑口滨螺、中华伪露齿螺、哈氏仿对虾、弧边招潮和等齿角沙蚕。该剖面大型底栖动物也可分为4个分布带：黑口滨螺-中华伪露齿螺-等齿角沙蚕带;琵琶拟沼螺-宽身闭口蟹-耳螺科的一种带;蝼蛄虾．扁平拟闭口蟹带;沈氏长方蟹-珠带拟蟹守螺带。群落生物量的变化也主要由软体动物所主导,栖息密度的变化主要由甲壳动物所主导,多样性指数变化主要由软体动物所主导。底栖动物群落的等级聚类和非参数多变量标序显示,大型底栖动物分带与红树植物群落类型相一致。大型底栖动物分带受红树植物群落类型影响的主要原因是不同红树植物群落间的群落特征、沉积物性质和所处潮位线存在差异。     

SMALL SUBUNIT rDNA SEQUENCE ANALYSIS OF SYMBIOTIC DINOFLAGELLATES FROM SEVEN SCLERACTINIAN CORALS IN A TAHITIAN LAGOON

The diversity of symbiotic dinoflagellates from reef-building corals collected in the lagoon of Tahiti (South Pacific ocean) was investigated by using a molecular approach. Populations of symbionts (strains or species) of 7 coral species ( Fungia scutaria , F. paumotensis Stutchbury, Pavona cactus Forskål, Leptastrea transversa Kluzinger, Pocillopora verrucosa Ellis and Solender, Montastrea curta Dana, and Acropora formosa Dana) were delimited by phylogenetic analysis of small subunit rDNA sequences. Coral P. verrucosa harbored 2 populations of symbiont SSU rDNA sequences that may correspond to two different Symbiodinium species. Corals F. scutaria and M. curta also seemed to contain two different Symbiodinium species. SSU rDNA dinoflagellate sequences from P. cactus , L. transversa , F. scutaria , F. paumotensis , and P. verrucosa were in the same phylogenetic cluster and showed low variability. For these distantly related coral species, dinoflagellate strains from the same species, rDNA paralogues from the same strain, or closely related Symbiodinium species could not be distinguished because monophyletic subgroups were not observed. SSU rDNA dinoflagellate sequences from A. formosa and M. curta were clearly different from the other Symbiodinium sequences and may represent specific species. This molecular approach highlighted a greater diversity of symbiotic dinoflagellates from corals in South Pacific ( Symbiodinium groups A, B, and C) than that observed in the rest of the Pacific ocean ( Symbiodinium group C). The diversity of symbiotic associations in a restricted area of the lagoon of Tahiti may reflect the complexity of interactions between species of Symbiodinium and corals.     

The biodiversity of macrofaunal organisms in marine sediments

Marine sediments cover most of the ocean bottom, and the organisms that reside in these sediments therefore constitute the largest faunal assemblage on Earth in areal coverage. The biomass in these sediments is dominated by macrofauna, a grouping of invertebrate polychaetes, molluscs, crustaceans and other phyla based on size. Globally, only a small portion of marine habitats have been sampled for macrofauna, but sampled areas have led to global estimates of macrofaunal species number ranging from 500,000 to 10,000,000. Most of these species are undescribed, and global syntheses of patterns of individual taxa and biodiversity are few and based on limited samples. The significance of biodiversity in marine sediments to ecosystem processes is poorly understood, but individual species and functional groups are known to carry out activities that have global importance. Macrofaunal activity impacts global carbon, nitrogen and sulphur cycling, transport, burial and metabolism of pollutants, secondary production including commercial species, and transport of sediments. Documented extinctions of marine macrofauna are few, but the ramifications of species loss through habitat shrinkage and undocumented extinctions are unknown. Limited data suggest there is substantial functional redundancy in macrofauna within trophic groups but whether this redundancy is sufficient to allow species loss without significantly altering ecosystem processes is unknown. Sorely needed are experiments that test specific hypotheses on biodiversity, redundancy, and ecosystem processes as they relate to marine macrofauna.     

Vagile macrofauna and the hydrographic environment of the Saco River Estuary and adjacent waters of the Gulf of Maine

We studied the vagile epibenthic and nektonic macrofauna and hydrographic environments of the Saco River estuary and adjacent waters, including Biddeford Pool lagoon and Saco Bay (Gulf of Maine), over a 3-year period (1979–82). Twice as many species of vagile macrofauna were found in Saco Bay as in the estuarine environments, and none were found at the head of the estuary below the dam. Field distributions of various species and life stages agreed with their locomotor responses in the laboratory to physicochemical gradients, supporting the view that habitat correlations are at least in part determined by active habitat preference and/oor avoidance behavior of vagile species. We also examined the stomach contents of specimens of two common fish species to determine their local feeding habits. Yearling Pollachius virens fed primarily on Ammodytes americanus, while yearling Pseudopleuronectes americanus stomachs contained primarily small, whole Echinarachnius parma.     

A phylogenetic test of multiple proposals for the origins of the East Indies coral reef biota

Aim  We analysed data on Indo-Pacific coral reef taxa to test four mechanisms proposed for the origins of the biodiversity centre in the East Indies Triangle: (1) the centre of origin hypothesis, (2) the centre of accumulation hypothesis, (3) the centre of overlap hypothesis, and (4) the bioaccumulation hypothesis.
Location  The Indian and western Pacific oceans.
Methods  The data set consisted of eight clades of fishes, four of corals and one of molluscs, consisting of a total of 95 species, with 72 informative nodes, in 29 areas. We used phylogenetic analysis for comparing trees (PACT) to reconstruct reticulate area relationships.
Results  An analysis using PACT produced very little congruence between area relationships among the histories of the taxa examined. Only two sets of two taxa each showed substantial congruence; several other taxa showed partial congruence.
Main conclusions  Despite numerous 'explanatory' claims for the incredible biodiversity of the marine macrofauna of the East Indies Triangle, the patterns obtained here did not accord with any of the hypotheses proposed. It is possible that, with the addition of more taxa, additional patterns would emerge. Much more systematic work within the East Indies is required to resolve this problem.     

Zonation of macrobenthic communities along two bays in an insular coral reef ecosystem (Moorea, French Polynesia)

Zonation of macrobenthic communities (corals, algae, molluscs, sponges and echinoderms) on fringing reefs was investigated in two bays in a coral reef ecosystem (Moorea, French Polynesia). Species richness, abundance and coral cover, and species richness of macroalgae increased from the bayhead to the bay entrance. For molluscs and sponges, no general trend was observed. Species richness and abundance of echinoderms increased from the head to the entrance of Opunohu Bay, but this trend was less pronounced in Cook Bay. The gradients observed for corals, macroalgae and echinoderms were correlated with one or several of the following abiotic factors: salinity, turbidity, concentration of silicates in surface waters, and concentrations of organic carbon, carbohydrates and amino acids in the sediments. These factors are associated with terrestrial run-off via river discharge that occurs at the bayheads, where the major river is located. The high degree of confinement in the bayheads allowed the establishment of only a few tolerant macrobenthic species. Although the low diversity and abundance of corals and echinoderms seem to be a characteristic of Polynesian bays, a high diversity of corals can be found in the vicinity of the bayheads in coral reefs of the western Pacific.