小鼠黑色素瘤相关抗原MART1的原核表达及抗体制备

目的:利用基因重组技术获得鼠黑色素瘤相关抗原MART1,并制备兔抗鼠多克隆抗体。方法:采用RT-PCR方法从小鼠黑素瘤B16-F1细胞株总RNA中扩增MART1的编码c DNA序列,并构建p ET32a-MART1原核表达质粒,将此质粒转化大肠杆菌Rosseta(DE3)菌株后用IPTG诱导表达,获得的MART1融合蛋白依次用Ni-NTA亲和层析和制备性聚丙烯酰胺凝胶电泳分离纯化,纯化的MART1融合蛋白用SDS-PAGE和Western印迹鉴定;以纯化的MART1融合蛋白为抗原,皮内接种日本大耳白兔,制备多克隆抗体,采用ELISA、Western印迹和细胞免疫荧光法分别检测兔血清中抗体的效价及抗原的特异性。结果:构建出MART1原核表达质粒,小鼠MART1基因在大肠杆菌Rosseta(DE3)中可诱导性表达并有效纯化;用纯化的MART1蛋白在日本大耳白兔中制备出高效价的多克隆抗体(效价1∶1 024 000),该抗体可与原核及真核表达的MART1蛋白特异性结合。结论:建立了鼠MART1蛋白原核表达和纯化技术,制备出的高效价和特异性抗MART1多克隆抗体将为黑色素瘤的防治研究提供技术支撑。     

蛋白激发子Hrip1互作蛋白的筛选及其原核表达

蛋白激发子Hrip1是从极细链格孢菌(Alternaria tenuissima)中分离纯化出的一种新型超敏反应诱导蛋白,能激发烟草、拟南芥和水稻等多种植物的免疫防御反应,提高广谱抗病性。为了探究Hrip1诱导植物抗性反应的分子机制,以Hrip1为诱饵蛋白,通过酵母双杂交,在水稻c DNA文库中筛选Hrip1的互作蛋白。经回转验证和x-a-gal染色得到了一个Hrip1互作蛋白-CSN5。构建了互作蛋白CSN5的原核表达载体pGEX-6P-2-CSN5,并转化大肠杆菌表达菌株BL21。经IPTG诱导后获得了可溶性的融合表达蛋白,用GST亲和层析柱纯化获得单一条带的融合表达蛋白,并用Western blot鉴定了融合表达蛋白的正确性。研究结果为进一步鉴定Hrip1的互作蛋白及其功能奠定了基础。     

Ataxin-3融合蛋白表达、纯化及抗血清的制备

目的:表达GST-ataxin-3-N融合蛋白并制备GST-ataxin-3特异性抗体,为深入研究其功能及其在SCA3发病机制中的作用提供重要的技术和材料保障.方法:将人ataxin-3氨基端基因克隆入原核表达载体pGEX-4T-2,在大肠杆菌(E.coli)BL21中表达,用Glutathione sepharose4B凝胶亲和柱纯化目的蛋白.利用纯化的GST-ataxin-3-N蛋白制备多克隆抗体.结果:成功构建了原核表达载体,得到高表达量的融合蛋白,经亲和层析柱纯化获得较高纯度的GST-ataxin-3-N融合蛋白.以融合蛋白免疫新西兰兔得到Ataxin-3-N多克隆抗体,Western Blotting及免疫荧光均证实该抗体能够识别Ataxin-3-myc蛋白,具有较高特异性.结论:利用原核表达人GST-ataxin-3-N融合蛋白制备的Ataxin-3多克隆抗体具有较好的特异性,可用于该蛋白的相关研究.     

Nono蛋白的原核表达、纯化和多克隆抗体的制备

目的表达和纯化带多聚组氨酸（6×His）标签的Nono （ non-POU-domain-containing, octamer-binding protein ）融合蛋白并制备抗Nono多克隆抗体。方法构建pET-28a（＋）-Nono重组表达质粒,转入Rosetta（DE3）大肠埃希菌,以IPTG诱导6×His-Nono融合蛋白表达,经镍离子金属螯合树脂纯化后,用纯化出的蛋白免疫BALB／C小鼠制备多克隆抗体,并用ELISA检测多克隆抗体的效价,Western印迹检测多克隆抗体的特异性。结果在大肠埃希菌中诱导出高水平表达的His-Nono融合蛋白,经亲和树脂纯化后免疫小鼠,获得了高特异性的抗Nono抗血清。结论成功构建pET-28a（＋）-Nono原核表达质粒,表达并纯化出高纯度的目标蛋白,制备出高滴度、高特异性的多克隆抗体。     

小鼠OAZ2基因的原核表达及抗体制备

目的:克隆小鼠鸟氨酸脱羧酶抗酶2(OAZ2)功能基因,原核表达、纯化OAZ2蛋白并制备抗OAZ2多克隆抗体.方法:IRT-PCR法从鼠黑色素瘤细胞总RNA中克隆OAZ2 cDNA后,通过重叠延伸PCR技术构建无需移码即可全长翻译的功能基因.将OAZ2功能基因克隆人原核表达载体pET15b并原核表达.表达的蛋白经Ni-NTA亲和层析纯化后,用SDS-PAGE和Western Blot分析鉴定.用纯化的OAZ2蛋白作为抗原免疫Bab/C小鼠以制备多克隆抗体,制备抗体用ELISA和Western Blot检测抗体滴度和特异性.结果:成功获得小鼠OAZ2 cDNA并构建出无需移码翻译的OAZ2功能基因.OAZ2功能基因在大肠杆菌BL21(DE3)中可诱导性高表达并能用Ni-NTA树脂高效纯化.用纯化蛋白免疫Bab/C小鼠制备的抗血清经ELISA检测有较高的多克隆抗体效价(＞1∶64000),经Western blot鉴定可与纯化的OAZ2蛋白质特异性结合.结论:建立了鼠OAZ2蛋白原核表达和纯化技术,制备出高效价和特异性抗OAZ2多克隆抗体,为进一步研究OAZ2基因的功能奠定了基础.     

小鼠泛素结合酶UBE2W的抗体制备及组织表达谱分析

泛素结合酶(E2)是蛋白泛素化修饰所需的第二个连接酶, 在泛素转移和底物特异性识别过程中发挥着重要作用。UBE2W是一种新发现的E2酶, 其果蝇属同源蛋白可能在光转导或视网膜变性过程中发挥作用, 鼠和人同源蛋白功能未见报道。生物信息学分析UBE2W鼠源氨基酸序列, 发现UBE2W具有典型的UBC结构域并在多种物种高度保守。通过构建UBE2W原核表达质粒, 在大肠杆菌中表达并纯化了GST-UBE2W融合蛋白。以此纯化蛋白作为抗原免疫新西兰白兔制备抗UBE2W多抗血清, 并利用制备的UBE2W抗原柱亲和纯化UBE2W多抗。为了检测纯化抗体特异性, 在真核细胞中瞬时表达了myc-UBE2W融合蛋白, 分别用myc单抗和UBE2W多抗进行Western blotting分析, 结果表明获得了特异性的UBE2W抗体。利用此特异性抗体在小鼠脑、心脏、肾脏、肝脏、肺、肌肉、脾脏和睾丸等组织中均检测到了UBE2W的表达, 且在小鼠睾丸中成年期表达最高。     

小鼠泛素结合酶UBE2W的抗体制备及组织表达谱分析

泛素结合酶(E2)是蛋白泛素化修饰所需的第二个连接酶, 在泛素转移和底物特异性识别过程中发挥着重要作用。UBE2W是一种新发现的E2酶, 其果蝇属同源蛋白可能在光转导或视网膜变性过程中发挥作用, 鼠和人同源蛋白功能未见报道。生物信息学分析UBE2W鼠源氨基酸序列, 发现UBE2W具有典型的UBC结构域并在多种物种高度保守。通过构建UBE2W原核表达质粒, 在大肠杆菌中表达并纯化了GST-UBE2W融合蛋白。以此纯化蛋白作为抗原免疫新西兰白兔制备抗UBE2W多抗血清, 并利用制备的UBE2W抗原柱亲和纯化UBE2W多抗。为了检测纯化抗体特异性, 在真核细胞中瞬时表达了myc-UBE2W融合蛋白, 分别用myc单抗和UBE2W多抗进行Western blotting分析, 结果表明获得了特异性的UBE2W抗体。利用此特异性抗体在小鼠脑、心脏、肾脏、肝脏、肺、肌肉、脾脏和睾丸等组织中均检测到了UBE2W的表达, 且在小鼠睾丸中成年期表达最高。     

水稻精细胞差异表达基因RSG6的克隆和初步研究

用水稻 (OryzasativaL .)精细胞优势表达克隆BF4 75 2 0 7为探针 ,筛选水稻精细胞cDNA文库 ,得到一全长为1176bp的序列 ,其开放读码框编码 2 81个氨基酸 ,与已知蛋白质无明显同源性 ,属于一新发现的基因 ,GenBank登录号为AF4 4 2 4 90。Southern杂交显示该基因可能含有内含子。RT_PCR结果显示该基因在根、叶、二细胞花粉、成熟花粉、授粉子房和精细胞中均有表达 ,但在精细胞中的表达量要高得多 ,是精细胞差异表达基因。将此基因命名为RSG6 (ricespermgene 6 )。将RSG6的编码区克隆到表达载体pQE30上 ,构建重组质粒。在大肠杆菌M15中表达出N端融合了 6×His的融合蛋白。用纯化的融合蛋白免疫家兔 ,制得高效价、高特异性的抗体     

核心组蛋白的融合表达和纯化

目的:克隆核心组蛋白H2A、H2B、H3和H4的基因,表达并纯化组蛋白与谷胱甘肽S-转移酶(GST)的融合蛋白。方法:用PCR方法从乳腺文库中扩增核心组蛋白H2A、H2B、H3和H4的编码序列,分别将其以正确相位与pGEX-KG载体中的GST编码序列融合,得到重组质粒pGST-H2A、pGST-H2B、pGST-H3和pGST-H4,分别转化大肠杆菌BL21,表达融合蛋白GST-H2A、GST-H2B、GST-H3和GST-H4;用谷胱甘肽-Sepharose 4B亲和纯化融合蛋白;用Western印迹检测融合蛋白的表达及纯化。结果:分别构建了核心组蛋白H2A、H2B、H3和H4的融合表达载体;Western印迹检测表明,融合蛋白GST-H2A、GST-H2B、GST-H3和GST-H4获得表达及纯化。结论:表达并纯化了H2A、H2B、H3和H4的融合蛋白,为进一步研究核心组蛋白的功能奠定了基础。     

重组人LIF融合蛋白表达纯化及其活性鉴定

目的:原核表达重组hLIF融合蛋白并进行诱导表达、纯化及活性鉴定.方法:将hLIF基因克隆至pThioHisA载体,构建融合表达载体pThioHisA-hLIF,转化大肠杆菌BL21(DE3),IPTG诱导表达.表达产物经亲和层析后,Western blot检测目的蛋白的特异性.用小鼠胚胎干细胞脱饲养层培养对纯化后的重组hLIF融合蛋白进行生物活性的鉴定.结果:降低诱导温度和延长诱导时间能增加hLIF融合蛋白的可溶性表达,纯化后的重组蛋白纯度大于95％,Western blot检测显示了良好的特异性.在脱饲养层细胞培养条件下,添加纯化的hLIF融合蛋白能够有效的维持小鼠胚胎干细胞的未分化状态.结论:重组hLIF融合蛋白可在大肠杆菌中高效表达,具有良好的特异性,为干细胞研究及hLIF蛋白的其他功能研究奠定了基础.     

Expression, purification, and characterization of two NADP-malic enzymes of rice (Oryza sativa L.) in Escherichia coli

NADP-malic enzymes (NADP-ME) are isozymes in plants. To clarify the diversity and function of NADP-ME isozymes in rice, we produced two active GST-fused NADP-ME proteins, NADP-ME2 and NADP-ME3 in Escherichia coli, and the fusion proteins were purified by affinity chromatography using a glutathione-Sepharose 4B column. After enzymatic cleavage of the GST tag, final yields were 1.4 mg/g wet cell weight (wcw) for NADP-ME2 and 3.5 mg/g wcw for NADP-ME3, respectively, and the molecular weights of NADP-ME2 and NADP-ME3 were about 65 and 62 kDa, respectively. The optimum pH is 7.3 for NADP-ME2 and 7.7 for NADP-ME3. The Km values for malate of NADP-ME2 and NADP-ME3 were 2.6 and 3.1 mM, whereas the Km values for NADP were 79 and 93 microM, respectively. The Kcat values of NADP-ME2 and NADP-ME3 for malate were about 91.7 and 96.7 s-1, respectively, and the Kcat values for NADP about 88.3 and 98.3 s-1, respectively. These results suggest that the two rice isozymes of NADP-ME in vitro have similar kinetic parameter.     

An isozyme of the NADP-malic enzyme of a CAM plant, Aloe arborescens, with variation on conservative amino acid residues

In Aloe arborescens, an obligate CAM plant, Western analysis detected three major isoforms of NADP-malic enzyme (NADP-ME), 72kDa with a pI of 6.0, 65kDa with a pI of 5.6 and 65kDa with a pI of 5.5. Among them, the 65kDa protein with a pI of 5.5 was leaf-specific, and the 65kDa protein with a pI of 5.6 was found only in roots, whereas the 72kDa protein was uniformly detected in both organs. Activity staining indicated enzyme activity of both 65kDa NADP-MEs but little activity of the 72kDa protein. A cDNA clone encoding a leaf-abundant NADP-ME, AME1, was isolated. Deduced amino acid sequence of AME1 showed a high degree of homology to known NADP-MEs, but it was also found that AME1 contained substitutions on five conservative amino acid residues, some of which have been predicted to be important for their enzyme activity. Transgenic rice carrying the aloe AME1 gene efficiently produced an additional 65kDa protein with a pI of 5.5 as an active NADP-ME. These results indicate that AME1 corresponds to the leaf-specific 65kDa NADP-ME, which may be involved in CAM photosynthesis. It was also shown that substitutions of these conservative amino acid residues identified in AME1 still allowed it to give enzyme activity.     

The activity and isoforms of NADP-malic enzyme in Nicotiana benthamiana plants under biotic stress

The activity and presence of isoforms of NADP-dependent malic enzyme (NADP-ME, EC 1.1.1.40) were studied in non-transgenic and transgenic Nicotiana benthamiana plants containing potyviral gene for helper component protease (HC-pro) and in plants infected by Potato virus Y strain NTN (PVY(NTN)). No significant changes in enzyme activities and isoenzyme pattern were observed due to foreign gene introduction and PVY(NTN) infection. However, the activity and isoenzyme composition of NADP-ME measured in extracts from different parts of the plants showed significant differences. Non-denaturating electrophoresis followed by specific detection of NADP-ME activity in polyacrylamide gel detected the presence of only one isoform in roots and younger leaves. Two isoforms of NADP-ME were detected in older leaves and stem (relative molecular mass approximately 248,000 and approximately 280,000) and three isoforms corresponding to tetramer, dimer and monomer were found in flowers. The activity of NADP-ME and the isoenzyme pattern was discussed in relation to its role in plant metabolism within distinct plant parts.     

<Emphasis Type="Italic">Arabidopsis thaliana</Emphasis> NADP-malic enzyme isoforms: high degree of identity but clearly distinct properties

The Arabidopsis thaliana genome contains four NADP-malic enzymes genes (NADP-ME1-4). NADP-ME4 is localized to plastids whereas the other isoforms are cytosolic. NADP-ME2 and 4 are constitutively expressed, while NADP-ME1 is restricted to secondary roots and NADP-ME3 to trichomes and pollen. Although the four isoforms share remarkably high degree of identity (75-90%), recombinant NADP-ME1 through 4 show distinct kinetic properties, both in the forward (malate oxidative decarboxylation) and reverse (pyruvate reductive carboxylation) reactions. The four isoforms behave differently in terms of reversibility, with NADP-ME2 presenting the highest reverse catalytic efficiency. When analyzing the activity of each isoform in the presence of metabolic effectors, NADP-ME2 was the most highly regulated isoform, especially in its activation by certain effectors. Several metabolites modulate both the forward and reverse reactions, exhibiting dual effects in some cases. Therefore, pyruvate reductive carboxylation may be relevant in vivo, especially in some cellular compartments and conditions. In order to identify residues or segments of the NADP-ME primary structure that could be involved in the differences among the isoforms, NADP-ME2 mutants and deletions were analysed. The results obtained show that Arg115 is involved in fumarate activation, while the amino-terminal part is critical for aspartate and CoA activation, as well as for the reverse reaction. As a whole, these studies show that minimal changes in the primary structure are responsible for the different kinetic behaviour of each AtNADP-ME isoform. In this way, the co-expression of some isoforms in the same cellular compartment would not imply redundancy but represents specificity of function.     

Maize C4 NADP-malic enzyme. Expression in Escherichia coli and characterization of site-directed mutants at the putative nucleoside-binding sites

Malic enzymes catalyze the oxidative decarboxylation of l-malate to yield pyruvate, CO(2), and NAD(P)H in the presence of a bivalent metal ion. In plants, different isoforms of the NADP-malic enzyme (NADP-ME) are involved in a wide range of metabolic pathways. The C(4)-specific NADP-ME has evolved from C(3)-type malic enzymes to represent a unique and specialized form of NADP-ME as indicated by its particular kinetic and regulatory properties. In the present study, the mature C(4)-specific NADP-ME of maize was expressed in Escherichia coli. The recombinant enzyme has essentially the same physicochemical properties and K(m) for the substrates as those of the naturally occurring NADP-ME previously characterized. However, the k(cat) was almost 7-fold higher, which may suggest that the previously purified enzyme from maize leaves was partially inactive. The recombinant NADP-ME also has a very low intrinsic NAD-dependent activity. Five mutants of NADP-ME at the postulated putative NADP-binding site(s) (Gsite5V, Gsite2V, A392G, A387G, and R237L) were constructed by site-directed mutagenesis and purified to homogeneity. The participation of these residues in substrate binding and/or the catalytic reaction was inferred by kinetic measurements and circular dichroism and intrinsic fluorescence spectra. The results obtained were compared with a predicted three-dimensional model of maize C(4) NADP-ME based on crystallographic studies of related animal NAD(P)-MEs. The data presented here represent the first prokaryotic expression of a plant NADP-ME and reveals valuable insight regarding the participation of the mutated amino acids in the binding of substrates and/or catalysis.     

Carbon metabolism in germinating Ricinus communis cotyledons. Purification, characterization and developmental profile of NADP-dependent malic enzyme

The possible implication of NADP-dependent malic enzyme (NADP-ME; L-malate:NADP oxidoreductase [oxaloacetate-decarboxylating], EC 1.1.1.40) in fatty acid synthesis was examined in Ricinus communis L. cotyledons, NADP-ME catalyses the conversion of L-malate to pyruvate and NADPH, potential substrates for fatty acid synthesis. NADP-ME activity and protein levels were monitored during germination, up to 20 days postimbibition. The developmental profile showed a peak in activity (6 times with respect to the basal value) and immunoreactive protein (a single 72-kDa band using anti-maize NADP-ME antibodies) around day 7. The enzyme was partially purified (41-fold) and its kinetics characterized. The optimum pH was around 7.1. K_m values for L-malate and NADP⁺ were 0.68 m M and 8.2 μ M respectively. The enzyme used Mg²⁺ or Mn²⁺ as essential cofactors. Several metabolites were assayed as potential enzyme modulators. Succinate, CoA, acetyl-CoA and palmitoyl-CoA were activators of NADP-ME, at saturating or sub-saturating substrate concentrations, K² values for CoA and derivative compounds were in the micromolar range (i.e., 0.8 μ M for acetyl-CoA). No significant effects were obtained with other Krebs cycle intermediates and amino acids (i.e. 2-oxoglutarate, glutamate, glutamine, fumarate). The activity was 29 times higher in the forward (decarboxylating) direction compared to the reverse direction. These results hint at cotyledon NADP-ME behaving as a regulatory enzyme in R. communis . Its activity is responsive to metabolites of the fatty acid synthesis pathway, and thus a role in this metabolism is suggested.     

Faster Rubisco is the key to superior nitrogen-use efficiency in NADP-malic enzyme relative to NAD-malic enzyme C4 grasses

In 27 C4 grasses grown under adequate or deficient nitrogen (N) supplies, N-use efficiency at the photosynthetic (assimilation rate per unit leaf N) and whole-plant (dry mass per total leaf N) level was greater in NADP-malic enzyme (ME) than NAD-ME species. This was due to lower N content in NADP-ME than NAD-ME leaves because neither assimilation rates nor plant dry mass differed significantly between the two C4 subtypes. Relative to NAD-ME, NADP-ME leaves had greater in vivo (assimilation rate per Rubisco catalytic sites) and in vitro Rubisco turnover rates (k(cat); 3.8 versus 5.7 s(-1) at 25 degrees C). The two parameters were linearly related. In 2 NAD-ME (Panicum miliaceum and Panicum coloratum) and 2 NADP-ME (Sorghum bicolor and Cenchrus ciliaris) grasses, 30% of leaf N was allocated to thylakoids and 5% to 9% to amino acids and nitrate. Soluble protein represented a smaller fraction of leaf N in NADP-ME (41%) than in NAD-ME (53%) leaves, of which Rubisco accounted for one-seventh. Soluble protein averaged 7 and 10 g (mmol chlorophyll)(-1) in NADP-ME and NAD-ME leaves, respectively. The majority (65%) of leaf N and chlorophyll was found in the mesophyll of NADP-ME and bundle sheath of NAD-ME leaves. The mesophyll-bundle sheath distribution of functional thylakoid complexes (photosystems I and II and cytochrome f) varied among species, with a tendency to be mostly located in the mesophyll. In conclusion, superior N-use efficiency of NADP-ME relative to NAD-ME grasses was achieved with less leaf N, soluble protein, and Rubisco having a faster k(cat).