一株柴油脱硫菌的分离与鉴定

由最终产物为邻苯基苯酚（2-HBP）的二苯并噻吩（DBT）的4-S代谢途径出发,从被高硫原油污染的土样中分离,纯化得到一株能高效降解DBT的菌株,通过形态学,生理生化试验及16SrDNA基因测序,归类为Mycobacteriumsp．对细菌的培养条件进行研究,初步确定较为适宜的培养条件：温度为40℃,pH值为7．0,转速为200r／min．在此培养条件下,利用该菌株处理含有5mmol／LDBT的正十二烷模拟相,24h以后,DBT减少到3．36mmol／L,平均比脱硫率为8．34mmol DBTh^-1kg^-1 DCW（干细胞重）。     

二苯并噻吩分解菌的分离及特性研究

目的利用二苯并噻吩(DBT)分解菌的分离培养基从昆明捞鱼河的污泥中分离得到一株分解DBT的细菌HWXFJ2。方法通过形态观察、生理生化特征和16S rRNA基因序列分析,表明该菌属于革兰阳性菌、杆状、有荚膜,将其初步鉴定为黄色杆菌属的一株菌株;同时利用该菌株进行DBT分解能力的检测和研究。结果该菌株对DBT有较强的分解能力,在7 d和14 d对DBT分解的量分别是红球菌(Rhodococcus sp.HNCS21)的6.04倍和2.07倍。结论煤炭中的有机硫模式化合物为DBT,本研究可以为脱除煤炭中的有机硫提供理论依据,为进一步的应用提供菌种资源。     

水稻稻瘟病拮抗菌L1鉴定及抑菌特性的初步研究

本研究对水稻稻瘟病菌的拮抗菌L1形态、生理生化特性等进行测定, 结果发现其为杆状细胞、革兰氏阳性、菌落不规则有褶皱、好氧生长、颜色较深等, 初步鉴定为枯草芽孢杆菌; 拮抗菌L1培养5 d的发酵液抑菌活性最高, 抑菌率为74.57%; 拮抗菌L1对水稻稻瘟病菌的拮抗活性物质对温度不敏感; 拮抗菌L1的发酵液用硫酸铵梯度沉淀法提取粗蛋白, 在50%~60%硫酸铵饱和度下沉淀的粗蛋白质对水稻稻瘟病菌抑菌效果最好, 平均抑菌半径达0.51 cm。     

一株生物脱硫菌株的分离、鉴定及其脱硫活性的研究

以二苯并噻吩（DBT）为模型化合物,从火力发电厂周围的土壤和污水处理厂的活性污泥中分离得到一株能高效脱除有机硫的菌株S4,并对其进行了分子鉴定及脱硫活性的研究。应用PCR技术克隆到16S rDNA片段,核苷酸序列分析结果表明,该菌的16S rDNA的全序列与醋酸钙不动杆菌存在99%的同源性。该菌的最适脱硫温度为30℃,pH值为6～8,在此条件,该菌株对DBT的去除率可达到82%。     

瘤胃源粪臭素降解菌的分离鉴定及其降解特性研究

【目的】旨在从绵羊瘤胃中分离粪臭素降解菌,并评估其粪臭素降解能力和生长性能,以期开发适用于反刍动物降臭的直接饲喂微生物。【方法】以绵羊瘤胃液为分离来源,使用含有粪臭素的MSM培养基进行富集和分离,通过细菌菌落形态观察进行初步分类;应用16S rRNA基因扩增、测序及系统发育分析进行物种鉴定;绘制菌株生长曲线,通过HPLC技术测定粪臭素降解曲线。【结果】从绵羊瘤胃液中分离出25株粪臭素降解菌,经菌落形态鉴定选出11株代表菌株进行后续研究。物种鉴定结果显示,MSML2和MSML6属于枯草芽孢杆菌（Bacillus subtilis）,MSML4、MSML5、MSML7和MSML10属于阿氏普里斯特氏菌（Priestia aryabhattai）,MSML3和MSML11属于污染伯克霍尔德氏菌（Burkholderia contaminans）,MSML1、MSML8和MSML9属于成都假单胞菌（Pseudomonas chengduensis）。其中,MSML5生长速度最快,在约12 h后进入稳定期,稳定期菌体浓度最高;MSML3和MSML8在前16 h生长缓慢,32 h后进入稳定期。在粪...     

一株抗真菌解淀粉芽孢杆菌的分离鉴定及其发酵条件的初步研究

从堆肥中分离到一株对植物病原菌尖孢镰刀菌(Fusarium oxysporum)具有强烈抗菌活性并具有较广抗菌谱的细菌Q-12菌株。通过形态观察、生理生化实验1、6S rDNA同源性序列分析以及部分特异性基因序列分析,鉴定该菌为解淀粉芽孢杆菌。该菌的最适培养基组成为:葡萄糖5g/L,NH4Cl 1g/L,牛肉膏0.8g/L,氯化镁5g/L。最适培养温度为33℃,最适培养pH为6.0,最适培养时间为40h。     

新疆棉花黄萎病菌拮抗细菌的分离、筛选与鉴定

【背景】棉花黄萎病是由大丽轮枝菌(Verticillium dahliae Kleb.)引起的一种世界性病害,近年来对该病害的生物防治因具有环境友好和人畜安全的特性而倍受关注。【目的】筛选棉花黄萎病高效拮抗细菌并对其进行鉴定,为棉花黄萎病的生物防治扩充菌种资源。【方法】采用稀释涂布平板法分离细菌,并进行拮抗细菌的初筛和复筛,通过形态特征、生理生化特征和16S rRNA基因序列分析对筛选到的细菌进行鉴定,确定其分类地位。【结果】初筛分离到535株对病原菌具有拮抗作用的细菌,并选取了108株拮抗细菌进行复筛,最终筛选到了4株优势拮抗细菌。通过形态观察、生理生化特征和16SrRNA基因序列分析,将菌株BHZ-29、SHT-15、SHZ-24和SMT-24分别鉴定为贝莱斯芽孢杆菌(Bacillusvelezensis)、枯草芽孢杆菌斯皮兹仁亚种(Bacillus subtilis subsp. spizizenii)、萎缩芽孢杆菌(Bacillus atrophaeus)和香草芽孢杆菌(Bacillus vanillea)。【结论】获得了4株高效拮抗细菌,并且首次报道了香草芽孢杆菌对棉花黄萎病菌具有抑制作用。     

一株枯草芽孢杆菌的分离鉴定、生物学特性及其对水质净化的作用

[背景]随着水产养殖业的发展和养殖集约化程度的提高,养殖水环境日趋恶化,养殖动物病害频发,而水产益生菌因其环境友好、安全而被广泛应用于水产养殖中.[目的]从南美白对虾养殖池底泥分离枯草芽孢杆菌,探究其体外生物学特性及对水质的净化作用,以期扩充微生态制剂的种质资源.[方法]采用稀释涂布平板法分离菌株,通过形态学观察、生理...     

茜草内生菌的分离鉴定及其抗菌活性物质研究

对中药植物茜草(Rubia cordifoliaL)的内生菌进行了分离和抗菌活性筛选,获得一株具有广谱抗菌活性的内生细菌。该细菌对常见的3种人类病原菌和4种植物病原菌具有拮抗作用。传统分类学和基于16S rRNA基因的分子分类学证据表明,该内生细菌为一株新的枯草芽孢杆菌,命名为Bacillus subtilisRC4。B.subtilisRC4在综合马铃薯培养基(pH值5.0)中于28℃振荡培养60h,产生的代谢物对白色念珠菌的抗菌活性最强。抗菌活性物质在100℃受热20min,活性维持80%以上,且在pH值2.0~11.0范围内稳定。经硅胶柱层析和高效液相色谱分离,得到主要抗菌活性化合物,质谱分析表明其分子量约为288Da。     

石油生物脱硫菌Agrobacterium tumefaciens UP-3的固定化研究

对能降解二苯并噻吩(DBT)的根癌土壤杆菌AgrobacteriumtumefaciensUP3菌株进行了固定化研究,以聚乙烯醇(PVA)和海藻酸钠(SA)混合物为包埋法固定化载体,固定化最佳操作条件为4℃交联,PVA和SA混合物总浓度7%,两者最佳浓度比为6,细胞浓度为0.05g/mL。当DBT加入量为2.7mmol/L时,UP-3的静息细胞最高脱硫率为13%,而固定化细胞的脱硫效率超过了60%;固定化细胞的最佳使用条件为降解5d,温度28℃～32℃。     

Sulfur-selective desulfurization of dibenzothiophene and diesel oil by newly isolated Rhodococcus sp. strains

New desulfurizing bacteria able to convert dibenzothiophene into 2-hydroxybiphenyl and sulfate were isolated from contaminated soils collected in Mexican refineries. Random amplified polymorphic DNA analysis showed they were different from previously reported Rhodococcus erythropolis desulfurizing strains. According to 16S rRNA gene sequencing and fatty acid analyses, these new isolates belonged to the genus Rhodococcus. These strains could desulfurize 4,6-dimethyldibenzothiophene which is one of the most difficult dibenzothiophene derivatives to remove by hydrodesulfurization. A deeply hydrodesulfurized diesel oil containing significant amounts of 4,6-dimethyldibenzothiophene was treated with Rhodococcus sp. IMP-S02 cells. Up to 60% of the total sulfur was removed and all the 4,6-dimethyldibenzothiophene disappeared as a result of this treatment.     

Deep desulfurization of hydrodesulfurization-treated diesel oil by a facultative thermophilic bacterium Mycobacterium sp. X7B

The dibenzothiophene (DBT) desulfurization pathway of a facultative thermophilic bacterium Mycobacterium sp. X7B was investigated. Metabolites were identified by gas chromatography-mass spectrometry, and the results showed that 2-hydroxybiphenyl, the end product of the previously reported sulfur-specific pathway (also called 4S pathway), was further converted to 2-methoxybiphenyl. This is the first strain to possess this ability and therefore, an extended 4S pathway was determined. In addition, the DBT-desulfurizing bacterium Mycobacterium sp. X7B was able to grow on DBT derivatives such as 4-methylDBT and 4,6-dimethylDBT. Resting cells could desulfurize diesel oil (total sulfur, 535 ppm) after hydrodesulfurization. GC flame ionization detection and GC atomic emission detection analyses were used to qualitatively evaluate the effect of Mycobacterium sp. X7B treatment on the content of the diesel oil. The total sulfur content of the diesel oil was reduced 86% using resting cell biocatalysts for 24 h at 45 degrees C.     

一株产生脂肽的枯草芽孢杆菌的分离鉴定及脂肽对原油的作用

从大庆油田地层水中分离到一组能高效产生生物表面活性剂的菌株,采用sfp基因PCR鉴定的方法从中分离到一株芽孢杆菌ZW-3,该菌株能够产生大量表面活性物质,采用细菌生理生化鉴定结合16S rDNA序列的系统发育学分析确定该菌株为枯草芽孢杆菌(Bacillus subtilis),通过薄层层析色谱(TLC)、高效液相色谱(HPLC)分析其代谢产物,初步鉴定为脂肽(Lipopeptide);该脂肽生物表面活性剂理化性质显示它能使培养基的表面张力从68.92mN/m降低25.19mN/m、原油/水的界面张力从23.53mN/m降低到4.57mN/m,与1.8%的NaOH溶液复配可以将油水界面张力降低到1.2×10-3 mN/m,其临界胶束浓度为33.3mg/L(3.24×10-5 mol/L),并具有较好的乳化活性和发泡性能,说明该菌株代谢的脂肽生物表面活性剂在提高石油采收率中具有广泛的应用前景.     

Evidence for the role of zinc on the performance of dibenzothiophene desulfurization by <Emphasis Type="Italic">Gordonia alkanivorans</Emphasis> strain 1B

Gordonia alkanivorans strain 1B is able to desulfurize dibenzothiophene (DBT) to 2-hydroxybiphenyl (2-HBP), the final product of the 4S pathway. However, both the cell growth and the rate of desulfurization can be largely affected by the nutrient composition of the growth medium due to cofactor requirements of many enzymes involved in the biochemical pathways. In this work, the effect of several metal ions on the growth and DBT desulfurization by G. alkanivorans was studied. From all the metal ions tested, only the absence of zinc significantly affected the cell growth and the desulfurization rate. By increasing the concentration of Zn from 1 to 10 mg L⁻¹, 2-HBP productivity was improved by 26%. The absence of Zn²⁺, when sulfate was also used as the only sulfur source, did not cause any difference in the bacterial growth. Resting cells grown in the presence of Zn²⁺ exhibited a 2-HBP specific productivity of 2.29 μmol g⁻¹ (DCW) h⁻¹, 7.6-fold higher than the specific productivity obtained by resting cells grown in the absence of Zn²⁺ (0.30 μmol g⁻¹ (DCW) h⁻¹). These data suggests that zinc might have a key physiological role in the metabolism of DBT desulfurization.     

亚麻微生物脱胶菌种的筛选与鉴定

在研究天然水沤法脱胶的过程中,通过初筛、复筛,从沤麻主生物期的沤麻液中筛选出两株茵落周围产生透明圈较大、脱胶酶活较高的菌株。通过形态观察,并对其多项生理、生化指标进行了分析研究,初步鉴定并命名为枯草芽孢杆菌A1和B1。初步加茵脱胶实验表明：枯草芽孢杆菌A1产生果胶酶、木聚糖酶,而不产生纤维素酶,脱胶周期为72小时;枯草芽孢杆茵B1产生果胶酶、木聚糖酶和纤维素酶,脱胶周期为50小时。     

分解玉米赤霉烯酮菌株的分离、鉴定及其产酶特征

【目的】从发酵食品材料中筛选出对玉米赤霉烯酮(ZEN)有分解作用的微生物,研究其分解效率及产酶特征并进行菌种鉴定。【方法】利用添加ZEN毒素类似物(PL)的固体培养基对25种发酵食品材料进行初筛,获得毒素类似物耐受菌株,经过用ZEN复筛,得到高效分解ZEN的细菌。用高效液相色谱法(HPLC)分析培养物残留ZEN,评价菌株对ZEN的分解效率。初步分析该菌株产纤维素酶、木聚糖酶及β-葡萄糖苷酶的特性。通过微生物形态学、分子生物学方法进行菌种鉴定,确定该菌的系统分类学地位。【结果】从发酵食品材料中筛选出一株分解ZEN的菌株BF-B-3,经初步鉴定该菌株为枯草芽孢杆菌(Bacillus subtilis)。其ZEN分解率达62.48%,测定该菌产纤维素酶、木聚糖酶及β-葡萄糖苷酶活力分别为160.38、84.51和4.14 U/mL。【结论】枯草芽孢杆菌属于饲用微生物,生物安全性高,所分离到的枯草芽孢杆菌疑似株(Bacillus subtilis)BF-B-3菌株,可作为具有分解ZEN功能的益生菌使用,具有较好的应用前景。     

Isolation and characterization of bacteria from soil contaminated with diesel oil and the possible use of these in autochthonous bioaugmentation

Two bacterial species (isolates N and O) were isolated from a paddy soil microcosm that had been artificially contaminated with diesel oil to which extrinsic Pseudomonas aeruginosa strain WatG, had been added exogenously. One bacterial species (isolate J) was isolated from a similar soil microcosm that had been biostimulated with Luria–Bertani (LB) medium. Isolates N and O, which were tentatively identified as Stenotrophomonas sp. and Ochromonas sp., respectively, by sequencing of their 16 S rRNA genes had no ability to degrade diesel oil on their own in any liquid medium. When each strain was cocultivated with P. aeruginosa strain WatG in liquid mineral salts medium (MSM) containing 1% diesel oil, isolate N enhanced the degradation of diesel oil by P. aeruginosa strain WatG, but isolate O inhibited it. In contrast, isolate J, which was tentatively identified as a Rhodococcus sp., degraded diesel oil contained not only in liquid LB and MSM, but also in paddy soil microcosms supplemented with LB medium. The bioaugmentation capacity of isolate J in soil microcosms contaminated with diesel oil was much higher than that of P. aeruginosa strain WatG. The possibility of using isolate J for autochthonous bioaugmentation is discussed.     

A comparison of the short term effects of diesel fuel and lubricant oils on Antarctic benthic microbial communities

The effects of diesel fuel and three lubricating oils on microbial communities in marine sediment were investigated in a field experiment at Casey Station, Antarctica. Sediment from a pristine site in Antarctica was treated with either Special Antarctic Blend (SAB) diesel, a synthetic lubricant (Mobil 0W-40), the same lubricant after use in a vehicle or an equivalent unused biodegradable lubricant (Titan GT1). The sediment was re-deployed in trays on the seabed for 5 weeks during the austral summer. The microbial community structure in the sediment upon collection, deployment and retrieval was investigated using denaturing gradient gel electrophoresis (DGGE), most probable number (MPN) counts and direct microscopic counting. It was found that only minor changes occurred in the microbial communities due to the experimental protocol. After 5 weeks however, there were significant differences between the communities in the SAB and clean and used lubricant (Mobil 0W-40) as compared to the control treatment. There was no significant difference between the control and biodegradable oil (Titan GT1) treatment. These results indicate that SAB and synthetic lubricants have a measurable effect on sediment microbial communities in the short-term. The biodegradable oil did not produce such an effect and we conclude that the use of such an oil could reduce the risks associated with oil spills in the Antarctic environment.     

Screening for Bacillus subtilis mutants deficient in pressure induced spore germination: identification of ykvU as a novel germination gene

Exposure to high pressure induces germination in spores of Bacillus subtilis. To investigate the mechanisms of this process and to compare the pressure and nutrient induced germination pathways, a random transposon knock-out library of B. subtilis was constructed and screened for clones with a compromised pressure induced germination at 100 MPa. Two mutants were isolated and their transposon insertion was mapped to gerAC and ykvU respectively. While GerAC is required for production of the l-alanine receptor which has been implicated in pressure-induced germination before, YkvU is shown here to be a novel germination determinant in B. subtilis, affecting germination by high (100 MPa) and very high (600 MPa) pressure, by nutrients and by dodecylamine, but not by Ca(2+)-dipicolinic acid.