Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern United States

Climate change predictions include warming and drying trends, which are expected to be particularly pronounced in the southwestern United States. In this region, grassland dynamics are tightly linked to available moisture, yet it has proven difficult to resolve what aspects of climate drive vegetation change. In part, this is because it is unclear how heterogeneity in soils affects plant responses to climate. Here, we combine climate and soil properties with a mechanistic soil water model to explain temporal fluctuations in perennial grass cover, quantify where and the degree to which incorporating soil water dynamics enhances our ability to understand temporal patterns, and explore the potential consequences of climate change by assessing future trajectories of important climate and soil water variables. Our analyses focused on long‐term (20–56 years) perennial grass dynamics across the Colorado Plateau, Sonoran, and Chihuahuan Desert regions. Our results suggest that climate variability has negative effects on grass cover, and that precipitation subsidies that extend growing seasons are beneficial. Soil water metrics, including the number of dry days and availability of water from deeper (>30 cm) soil layers, explained additional grass cover variability. While individual climate variables were ranked as more important in explaining grass cover, collectively soil water accounted for 40–60% of the total explained variance. Soil water conditions were more useful for understanding the responses of C₃ than C₄ grass species. Projections of water balance variables under climate change indicate that conditions that currently support perennial grasses will be less common in the future, and these altered conditions will be more pronounced in the Chihuahuan Desert and Colorado Plateau. We conclude that incorporating multiple aspects of climate and accounting for soil variability can improve our ability to understand patterns, identify areas of vulnerability, and predict the future of desert grasslands.     

无脊椎动物金属硫蛋白(MTs)多样性及其生态服务功能

金属硫蛋白（MTs）是一类低分子量、半胱氨酸含量异常丰富的金属结合多肽,自从20世纪70年代中期发现海洋无脊椎动物MTs以来,MTs已被证明广泛存在于无脊椎动物的各个类群之中。无脊椎动物物种间的金属硫蛋白存在着显著差异,研究无脊椎动物MTs多样性并揭示其生态服务功能,在理论与实践上都至关重要。本文分析了无脊椎动物MTs的多样性：结合金属元素多样性、同形体及其变体的蛋白质遗传多样性和生态服务功能多样性,并讨论了 MTs的三个生态服务功能：MTs对重金属解毒和调节作用、MTs作为环境监测的生物标志物、MTs的环境重金属污染净化功能及其在环境污染治理中的作用。     

Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes

Ecosystems worldwide are receiving increasing amounts of reactive nitrogen (N) via anthropogenic activities with the added N having potentially important impacts on microbially mediated belowground carbon dynamics. However, a comprehensive understanding of how elevated N availability affects soil microbial processes and community dynamics remains incomplete. The mechanisms responsible for the observed responses are poorly resolved and we do not know if soil microbial communities respond in a similar manner across ecosystems. We collected 28 soils from a broad range of ecosystems in North America, amended soils with inorganic N, and incubated the soils under controlled conditions for 1 year. Consistent across nearly all soils, N addition decreased microbial respiration rates, with an average decrease of 11% over the year‐long incubation, and decreased microbial biomass by 35%. High‐throughput pyrosequencing showed that N addition consistently altered bacterial community composition, increasing the relative abundance of Actinobacteria and Firmicutes, and decreasing the relative abundance of Acidobacteria and Verrucomicrobia. Further, N‐amended soils consistently had lower activities in a broad suite of extracellular enzymes and had decreased temperature sensitivity, suggesting a shift to the preferential decomposition of more labile C pools. The observed trends held across strong gradients in climate and soil characteristics, indicating that the soil microbial responses to N addition are likely controlled by similar wide‐spread mechanisms. Our results support the hypothesis that N addition depresses soil microbial activity by shifting the metabolic capabilities of soil bacterial communities, yielding communities that are less capable of decomposing more recalcitrant soil carbon pools and leading to a potential increase in soil carbon sequestration rates.     

Quantitative hydrological preferences of benthic stream invertebrates in Germany

Current knowledge regarding the flow preferences of benthic stream invertebrates is mostly based on qualitative data or expert knowledge and literature analysis. These established flow preferences are difficult to use in predictions of the effects of global change on aquatic biota. To complement the existing categories, we performed a large-scale analysis on the distribution of stream invertebrates at stream monitoring sites in order to determine their responses to various hydrological conditions.We used 325 invertebrate surveys from environmental agencies at 238 sites paired to 217 gauges across Germany covering a broad range of hydrological conditions. Based on these data, we modelled the respective probabilities of occurrences for 120 benthic invertebrate taxa within this hydrological range using hierarchical logistic regression models.Our analyses revealed that more than one-third of the taxa (18–40%) can be considered as ubiquitous and having a broad hydrological tolerance. Furthermore, 22–41% of the taxa responded to specific ranges of flow conditions with detectable optima. “Duration high flow event” represented the flow parameter that correlated best with the abundance of individual taxa, followed by “rate of change average event”, with 41 and 38% of the taxa showing a peak in their probability of occurrence at specific ranges of these metrics, respectively. The habitat suitability for these taxa may be potentially affected by global change-induced hydrological changes.Quantified hydrological traits of individual taxa might therefore support stream management and enable the prediction of taxa responses to flow alteration. The hydrological traits of stream benthic invertebrates may be used in forecasting studies in central Europe, and the methods used in this study are suitable for application in other regions with different flow regimes.     

亚热带森林转换对土壤无脊椎动物群落结构的影响

受人类活动干扰的增加,亚热带森林频繁转换为次生林和人工林,可能显著影响土壤无脊椎动物群落结构及其生态功能,但当前的认识并不一致。因此,于2022年7月调查了亚热带天然常绿阔叶林转换为次生林、米槠人工林、杉木人工林后土壤无脊椎动物群落结构特征。共捕获土壤无脊椎动物659只,丰度为26540只/m²,隶属1门6纲13目59科,其中蚁科和球角 虫 兆 科为优势类群。森林转换改变了土壤无脊椎动物群落组成和多样性。天然林向米槠人工林和杉木人工林转换后,土壤无脊椎动物丰度和类群均明显降低,其中大型土壤无脊椎动物丰度的响应更为敏感,在2种林型中分别显著降低了33.58%和36.53%。尽管林型转换对土壤无脊椎动物群落多样性指数无显著影响,但改变了土壤无脊椎动物群落组成,其中天然林与杉木人工林群落组成极不相似(J ＜ 0.25),等节 虫 兆 科为杉木人工林优势类群,占比达到59.84%。冗余分析显示,土壤湿度、凋落物现存量和凋落物磷含量是影响土壤无脊椎动物群落的主要因子,对土壤无脊椎动物群落的解释率为69.30%。可见,林型转换可能通过改变土壤理化性质和凋落物质量,调控土壤无脊椎动物群落结构。     

Spatial avoidance of patches of polluted chernozem soils by soil invertebrates

Soil invertebrates and heavy metal concentrations are heterogeneously distributed in the soil of steppe plots surrounding an iron mining enterprise in southern Russia. This study assesses whether patches of high soil invertebrate abundance coincide with patches of low concentrations of pollutants. For this aim, spatial analysis by distance indices (SADIE) was applied. Three valleys in Belogorye Nature Reserve were chosen. One valley faced the tailing pond to the north and the other two faced south-east or south-west. Two sampling plots were chosen in each valley, 60 m apart from each other. On every plot 16 soil cores were collected from a grid of 4 × 4 units with a 5-m distance between each sample unit. Each soil core had an area of 76 cm² and was 12–15 cm deep. All macroinvertebrates were hand-sorted and identified to family. Abundance of soil invertebrates was not controlled by patches of metal concentration in the soil. Epigaeic groups, like insects and other invertebrates inhabiting the litter layer, were not directly associated with local parameters of the soil. On the contrary, belowground invertebrate abundance (elaterid larvae and earthworms) showed significant dissociation with some heavy metal (Fe, Pb, Zn) concentrations in the soil. The patchiness of soil pollution may act as a leading factor of belowground soil invertebrate distribution. The spatial structure of animal populations in industrially transformed soils needs further research.     

A practical technique for non-destructive monitoring of soil surface invertebrates for ecological restoration programmes

Summary This study investigates the suitability of using wooden discs as facsimiles for natural fallen logs to non‐destructively monitor invertebrates. Wooden discs cut from tree trunks were placed on the ground at five sites and monitored. A diverse range of species was found under the discs including large numbers of some species. On Quail Island, Pine, Macrocarpa, Oak and Beech discs were compared. Beech discs had significantly fewer invertebrates and recognizable taxonomic units than other disc types. Pine discs had significantly more flatworms than the other three disc types. A comparison of invertebrate numbers when discs were placed directly on soil or grass indicated that larger numbers of individuals and recognizable taxonomic units were found under discs placed on bare soil compared with those on grass. Discs with a soil cavity beneath had significantly fewer individuals and recognizable taxonomic units than discs without cavities. Carabids showed considerable seasonal variation, with highest numbers in spring and lowest in winter, and larger numbers were found under discs at moist sites. Skinks over‐wintered under discs in drier open sites at Lincoln and Quail Island. Disc condition was assessed after 28 months and showed Macrocarpa had deteriorated the most of the four disc types. Wooden discs are a useful tool for the ecological management of terrestrial invertebrate fauna in restoration programmes for monitoring and considerable potential exists for discs to provide habitat for restoration of terrestrial invertebrate taxa.     

Biogeography and variability of eleven mineral elements in plant leaves across gradients of climate, soil and plant functional type in China

Understanding variation of plant nutrients is largely limited to nitrogen and to a lesser extent phosphorus. Here we analyse patterns of variation in 11 elements (nitrogen/phosphorus/potassium/calcium/magnesium/sulphur/silicon/iron/sodium/manganese/aluminium) in leaves of 1900 plant species across China. The concentrations of these elements show significant latitudinal and longitudinal trends, driven by significant influences of climate, soil and plant functional type. Precipitation explains more variation than temperature for all elements except phosphorus and aluminium, and the 11 elements differentiate in relation to climate, soil and functional type. Variability (assessed as the coefficient of variation) and environmental sensitivity (slope of responses to environmental gradients) are lowest for elements that are required in the highest concentrations, most abundant and most often limiting in nature (the Stability of Limiting Elements Hypothesis). Our findings can help initiate a more holistic approach to ecological plant nutrition and lay the groundwork for the eventual development of multiple element biogeochemical models.     

Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes

Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 27%). However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate‐driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome‐specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large‐scale decomposition models.     

Temperature affects the timing and duration of fungal fruiting patterns across major terrestrial biomes

The Earth's ecosystems are affected by a complex interplay of biotic and abiotic factors. While global temperatures increase, associated changes in the fruiting behaviour of fungi remain unknown. Here, we analyse 6.1 million fungal fruit body (mushroom) records and show that the major terrestrial biomes exhibit similarities and differences in fruiting events. We observed one main fruiting peak in most years across all biomes. However, in boreal and temperate biomes, there was a substantial number of years with a second peak, indicating spring and autumn fruiting. Distinct fruiting peaks are spatially synchronized in boreal and temperate biomes, but less defined and longer in the humid tropics. The timing and duration of fungal fruiting were significantly related to temperature mean and variability. Temperature-dependent aboveground fungal fruiting behaviour, which is arguably also representative of belowground processes, suggests that the observed biome-specific differences in fungal phenology will change in space and time when global temperatures continue to increase.     

Geographical variation and environmental correlates of functional trait distributions in palms (Arecaceae) across the New World

Functional traits play a key role in driving biodiversity effects on ecosystem functioning. Here, we examine the geographical distributions of three key functional traits in New World palms (Arecaceae), an ecologically important plant group, and their relationships with current climate, soil and glacial–interglacial climate change. We combined range maps for the New World (N = 541 palm species) with data on traits (leaf size, stem height and fruit size), representing the leaf–height–seed plant strategy scheme of Westoby, to estimate median trait values for palm species assemblages in 110 × 110‐km grid cells. Spatial and non‐spatial multi‐predictor regressions were used with the Akaike Information Criterion to identify minimum adequate models. Present‐day seasonality in temperature and precipitation played a major role in explaining geographical variation of all traits. Mean annual temperature and annual precipitation were additionally important for median leaf size. Glacial–interglacial temperature change was the most important predictor for median fruit size. Large‐scale soil gradients played only a minor role overall. These results suggest that current climate (larger median trait values with increasing seasonality) and glacial–interglacial temperature change (larger median fruit size with increasing Quaternary temperature anomaly) are important drivers for functional trait distributions of New World palms. © 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 179 , 602–617.     

Forest tree species adaptation to climate across biomes: Building on the legacy of ecological genetics to anticipate responses to climate change

Intraspecific variation plays a critical role in extant and future forest responses to climate change. Forest tree species with wide climatic niches rely on the intraspecific variation resulting from genetic adaptation and phenotypic plasticity to accommodate spatial and temporal climate variability. A centuries-old legacy of forest ecological genetics and provenance trials has provided a strong foundation upon which to continue building on this knowledge, which is critical to maintain climate-adapted forests. Our overall objective is to understand forest trees intraspecific responses to climate across species and biomes, while our specific objectives are to describe ecological genetics models used to build our foundational knowledge, summarize modeling approaches that have expanded the traditional toolset, and extensively review the literature from 1994 to 2021 to highlight the main contributions of this legacy and the new analyzes of provenance trials. We reviewed 103 studies comprising at least three common gardens, which covered 58 forest tree species, 28 of them with range-wide studies. Although studies using provenance trial data cover mostly commercially important forest tree species from temperate and boreal biomes, this synthesis provides a global overview of forest tree species adaptation to climate. We found that evidence for genetic adaptation to local climate is commonly present in the species studied (79%), being more common in conifers (87.5%) than in broadleaf species (67%). In 57% of the species, clines in fitness-related traits were associated with temperature variables, in 14% of the species with precipitation, and in 25% of the species with both. Evidence of adaptation lags was found in 50% of the species with range-wide studies. We conclude that ecological genetics models and analysis of provenance trial data provide excellent insights on intraspecific genetic variation, whereas the role and limits of phenotypic plasticity, which will likely determine the fate of extant forests, is vastly understudied.     

Putting soil invertebrate diversity on the map

Ecologists have had a very good foundational knowledge of the global distribution of plants and aboveground animals for many decades. But despite the immense diversity of soil organisms, our knowledge of the global distribution, drivers and threats to soil biodiversity is very limited. In this issue of Molecular Ecology, Bastida et al. (2020) produce the first global maps of soil invertebrate diversity that have been sampled at 83 locations, across six continents, using standardised methods and DNA sequencing. Using data from nematodes, arachnids and rotifers, and structural equation models, they find that diversity of these taxa is primarily driven by vegetation and climate. Given the anthropogenic changes that are occurring, and are projected to continue, this study provides important baseline information for future soil biodiversity and function monitoring, as well as exciting working hypotheses for targeted experiments.     

Hyporheic invertebrates as bioindicators of ecological health in temporary rivers: A meta-analysis

Worldwide, many rivers cease flow and dry either naturally or owing to human activities such as water extraction. However, even when surface water is absent, diverse assemblages of aquatic invertebrates inhabit the saturated sediments below the river bed (hyporheic zone). In the absence of surface water or flow, biota of this zone may be sampled as an alternative to surface water-based ecological assessments. The potential of hyporheic invertebrates as ecological indicators of river health, however, is largely unexplored. We analysed hyporheic taxa lists from the international literature on temporary rivers to assess compositional similarity among broad-scale regions and sampling conditions, including the presence or absence of surface waters and flow, and the regional effect of hydrological phase (dry channel, non-flowing waters, surface flow) on richness. We hypothesised that if consistent patterns were found, then effects of human disturbances in temporary rivers may be assessable using hyporheic bioindicators. Assemblages differed geographically and by climate, but hydrological phase did not have a strong effect at the global scale. However, hyporheic assemblage composition within regions varied along a gradient of higher richness during wetter phases. This indicates that within geographic regions, hyporheic responses to surface drying are predictable and, by extension, hyporheic invertebrates are potentially useful ecological indicators of temporary river health. With many rivers now experiencing, or predicted to experience, lower flows and longer dry phases owing to climate change, the development of ecological assessment methods specific to flow intermittency is a priority. We advocate expanded monitoring of hyporheic zones in temporary rivers and recommend hyporheic invertebrates as potential bioindicators to complement surface water assessments.     

我国土壤线虫生态学研究进展和展望

土壤线虫生态学主要探讨土壤线虫群落和其周围环境(包括生物和非生物)的相互关系, 包括不同生态系统中土壤线虫群落的分布和结构组成、线虫群落与土壤环境及其他土壤生物之间的相互作用等。本文回顾了我国研究者近年来在土壤线虫生态学研究领域的研究现状, 包括不同生态系统土壤线虫群落的分布、组成和多样性及其影响因素, 土壤线虫群落与全球气候环境变化的关系, 土壤线虫群落的生态功能以及土壤线虫群落生态学分析方法的发展及应用。重点评述近年来我国土壤线虫生态学的发展现状, 同时分析和比较了国内外土壤线虫生态学的发展态势, 提出建设全国范围的监测网络的重要性。未来我国土壤线虫生态学的发展方向应继续加强小尺度下土壤微食物网联通性和大尺度下全球气候变化对土壤线虫群落影响的研究以及加强相关新的研究技术方法的应用。