Depth and temperature drive patterns of spatial overlap among fish thermal guilds in lakes across Ontario,Canada

Aim

The spatial distribution of ectotherms is strongly dependent on the temperature of their environments. In temperate lakes, fishes with different thermal optima can become spatially segregated during summer stratification. This habitat partitioning, or niche complementarity, may play a role in the coexistence of trophically similar species; however, the extent of partitioning is dependent on the resources available within each habitat. Although habitat partitioning of fish thermal guilds has been studied in individual lakes, broad-scale patterns of spatial overlap and segregation are not yet understood. In this study, we explore the patterns and drivers of spatial overlap among thermal guilds (cold-, cool-, and warm-water) at a broad scale.

Location

Ontario, Canada.

Methods

We built a multivariate regression tree to explore patterns and environmental drivers of spatial overlap in freshwater fishes across three thermal guilds from 438 lakes.

Results

We identified five clusters of lakes exhibiting different patterns of spatial overlap among the three thermal guilds. Temperature (growing degree days) and maximum lake depth were strong drivers of the spatial overlap patterns.

Main Conclusions

These findings provide a better understanding of broad-scale patterns of spatial overlap and allow us to predict how spatial overlap, and ultimately species interactions and competition, may change under a warming climate.     

Experimental evidence that evolutionary relatedness does not affect the ecological mechanisms of coexistence in freshwater green algae

The coexistence of competing species depends on the balance between their fitness differences, which determine their competitive inequalities, and their niche differences, which stabilise their competitive interactions. Darwin proposed that evolution causes species' niches to diverge, but the influence of evolution on relative fitness differences, and the importance of both niche and fitness differences in determining coexistence have not yet been studied together. We tested whether the phylogenetic distances between species of green freshwater algae determined their abilities to coexist in a microcosm experiment. We found that niche differences were more important in explaining coexistence than relative fitness differences, and that phylogenetic distance had no effect on either coexistence or on the sizes of niche and fitness differences. These results were corroborated by an analysis of the frequency of the co‐occurrence of 325 pairwise combinations of algal taxa in > 1100 lakes across North America. Phylogenetic distance may not explain the coexistence of freshwater green algae.     

Ecology under lake ice

Winter conditions are rapidly changing in temperate ecosystems, particularly for those that experience periods of snow and ice cover. Relatively little is known of winter ecology in these systems, due to a historical research focus on summer ‘growing seasons’. We executed the first global quantitative synthesis on under‐ice lake ecology, including 36 abiotic and biotic variables from 42 research groups and 101 lakes, examining seasonal differences and connections as well as how seasonal differences vary with geophysical factors. Plankton were more abundant under ice than expected; mean winter values were 43.2% of summer values for chlorophyll a, 15.8% of summer phytoplankton biovolume and 25.3% of summer zooplankton density. Dissolved nitrogen concentrations were typically higher during winter, and these differences were exaggerated in smaller lakes. Lake size also influenced winter‐summer patterns for dissolved organic carbon (DOC), with higher winter DOC in smaller lakes. At coarse levels of taxonomic aggregation, phytoplankton and zooplankton community composition showed few systematic differences between seasons, although literature suggests that seasonal differences are frequently lake‐specific, species‐specific, or occur at the level of functional group. Within the subset of lakes that had longer time series, winter influenced the subsequent summer for some nutrient variables and zooplankton biomass.     

Robustness to thermal variability differs along a latitudinal gradient in zooplankton communities

Determining how thermal variability will affect the structure, stability, and function of ecological communities is becoming increasingly important as global warming is predicted to affect not only average temperatures but also increase the frequency of long runs of high temperatures. Latitudinal differences in the responses of ecological communities to changes in their thermal regimes have also been predicted based on adaptations over evolutionary time to different thermal environments. We conducted an experiment to determine whether variability in temperature leads to consistent changes in community structure, temporal dynamics, and ecosystem functioning in laboratory analogues of natural freshwater supralittoral rock pool communities inhabited by meiofauna and zooplankton collected from sub‐Arctic, temperate, and tropical regions. Thermal variability of +4 °C around mean temperature led to increased extinction frequency, decreases in consumer abundance, increases in temporal variability of consumer abundance, and shifts from predominately negative interactions observed under constant temperature to positive interactions in the temperate and tropical communities but not in the sub‐Arctic communities. That sub‐Arctic zooplankton communities may be more robust to thermal variability than temperate or tropical communities’ supports recent studies on macrophysiological adaptations of species along latitudinal gradients and suggests that increasing thermal variability may have the greatest effects on community structure and function in tropical and temperate regions.     

Molecular phylogeny of glacial relict species: a case of freshwater Valvatidae molluscs (Mollusca: Gastropoda) in North and East Asia

The study of glacial relict species has been focused on understanding how the biogeographic patterns of species have developed. A number of studies using phylogenetic and population genetics approaches have been conducted for terrestrial glacial relict species, and the mechanisms of their formation have been elucidated. On the other hand, less focus has been placed on glacial relict species inhabiting freshwater systems. In particular, stable lakes can serve as refugia during a glacial period, but research studies on freshwater relict species inhabiting lakes have not been well conducted. In order to clarify the mechanism of the glacial relict species in freshwater, we conducted a molecular phylogeny analysis, divergence time estimation, and a biogeographic reconstruction on freshwater Valvatidae molluscs, which have been considered as a glacial relict in the Japanese Archipelago. Our study shows that the valvatid fauna in the Japanese Archipelago was produced by multiple dispersal events from the Asian continent and by vicariance events during the period of the Pliocene–Quaternary glaciation. It includes multiple relict species that survived interglacial periods in different lakes. These findings suggest that the lakes can serve as refugia not only during glacial periods, but also during interglacial periods.     

Predicting a change in the order of spring phenology in temperate forests

The rise in spring temperatures over the past half‐century has led to advances in the phenology of many nontropical plants and animals. As species and populations differ in their phenological responses to temperature, an increase in temperatures has the potential to alter timing‐dependent species interactions. One species‐interaction that may be affected is the competition for light in deciduous forests, where early vernal species have a narrow window of opportunity for growth before late spring species cast shade. Here we consider the Marsham phenology time series of first leafing dates of thirteen tree species and flowering dates of one ground flora species, which spans two centuries. The exceptional length of this time series permits a rare comparison of the statistical support for parameter‐rich regression and mechanistic thermal sensitivity phenology models. While mechanistic models perform best in the majority of cases, both they and the regression models provide remarkably consistent insights into the relative sensitivity of each species to forcing and chilling effects. All species are sensitive to spring forcing, but we also find that vernal and northern European species are responsive to cold temperatures in the previous autumn. Whether this sensitivity reflects a chilling requirement or a delaying of dormancy remains to be tested. We then apply the models to projected future temperature data under a fossil fuel intensive emissions scenario and predict that while some species will advance substantially others will advance by less and may even be delayed due to a rise in autumn and winter temperatures. Considering the projected responses of all fourteen species, we anticipate a change in the order of spring events, which may lead to changes in competitive advantage for light with potential implications for the composition of temperate forests.     

Effects of temperature, salinity and fish in structuring the macroinvertebrate community in shallow lakes: implications for effects of climate change

Climate warming may lead to changes in the trophic structure and diversity of shallow lakes as a combined effect of increased temperature and salinity and likely increased strength of trophic interactions. We investigated the potential effects of temperature, salinity and fish on the plant-associated macroinvertebrate community by introducing artificial plants in eight comparable shallow brackish lakes located in two climatic regions of contrasting temperature: cold-temperate and Mediterranean. In both regions, lakes covered a salinity gradient from freshwater to oligohaline waters. We undertook day and night-time sampling of macroinvertebrates associated with the artificial plants and fish and free-swimming macroinvertebrate predators within artificial plants and in pelagic areas. Our results showed marked differences in the trophic structure between cold and warm shallow lakes. Plant-associated macroinvertebrates and free-swimming macroinvertebrate predators were more abundant and the communities richer in species in the cold compared to the warm climate, most probably as a result of differences in fish predation pressure. Submerged plants in warm brackish lakes did not seem to counteract the effect of fish predation on macroinvertebrates to the same extent as in temperate freshwater lakes, since small fish were abundant and tended to aggregate within the macrophytes. The richness and abundance of most plant-associated macroinvertebrate taxa decreased with salinity. Despite the lower densities of plant-associated macroinvertebrates in the Mediterranean lakes, periphyton biomass was lower than in cold temperate systems, a fact that was mainly attributed to grazing and disturbance by fish. Our results suggest that, if the current process of warming entails higher chances of shallow lakes becoming warmer and more saline, climatic change may result in a decrease in macroinvertebrate species richness and abundance in shallow lakes.     

The impact of intraspecific variation in a fish predator on the evolution of phenotypic plasticity and investment in sex in Daphnia ambigua

Theory predicts that the evolution of phenotypic plasticity depends upon cues that indicate environmental change. Predators typically induce plastic responses in prey. However, variation among populations of predators alters the frequency of predation and, possibly, the evolution of plasticity. We compared responses to predator cues in Daphnia ambigua from lakes where alewife (Alosa pseudoharengus) either do (anadromous) or do not (landlocked) migrate between marine and freshwater. In 'anadromous' lakes, Daphnia are abundant each spring but eliminated by alewives in summer, whereas Daphnia are constantly under the threat of predation in 'landlocked' lakes. Daphnia from 'anadromous' lakes grew faster, matured earlier and larger, produced more offspring and invested more in sex than Daphnia from landlocked lakes. We observed several significant lake type-by-predator treatment interactions. These interactions, whereby the differences between lakes were greater in predator-conditioned water, agree with theory and argue that Daphnia plasticity has been influenced by variation in alewives.     

The effects of global warming on Daphnia spp. population dynamics: a review

Various species of Daphnia usually play a key role in the food web of temperate freshwater systems. There is much evidence to show that climate change may influence Daphnia population dynamics, consequently altering both predator–prey interactions and the efficiency of algal biomass control in these ecosystems. This review will analyse and discuss the current knowledge on Daphnia responses to climate warming based on an analysis of selected papers. The presented results indicate that warming may have important direct and indirect effects on Daphnia biology and ecology via its influence on their life-history processes (metabolism, growth, reproduction) and the properties of their habitats. The plasticity of daphnids in terms of adaptive responses is generally high and includes phenotypic adaptations and changes in genotypes, although it also depends upon the strength of selection and the available genetic variation. The seasonal timing and magnitude of temperature increases are important for seasonal biomass fluctuations of Daphnia and similarly influence the potential synchrony of daphnids and phytoplankton succession (the timing hypothesis). In light of the most recent studies on this topic, even a minor warming during short but critical seasonal periods can cause factors that disturb Daphnia population dynamics to coincide, which may destabilize lake food webs by decoupling trophic interactions. Both winter and spring are important critical periods for determining future seasonal fluxes of Daphnia spp. and, consequently, the time of the clear-water phase and the occurrence and duration of Daphnia midsummer decline. Winter conditions may also affect the impact of fish predation on daphnids during summer months. However, the effects of global warming on Daphnia population dynamics and on ecosystem functioning are often difficult to predict due to their complexity and the presence of both antagonistic and synergistic drivers. Thus, the diverse responses of daphnids to climate anomalies depend on both biotic (predator abundance and seasonal phytoplankton succession) and abiotic factors (e.g. hydrodynamics, intensity and duration of thermal stratification, trophic state or geomorphology) of lakes, which are directly influenced by weather changes. The analysis and quantification of such complex interactions require the involvement of different kinds of specialists and the development of accurate research approaches, such as molecular genetic methods or mathematical modelling.     

Ice-cover effects on competitive interactions between two fish species

1. Variations in the strength of ecological interactions between seasons have received little attention, despite an increased focus on climate alterations on ecosystems. Particularly, the winter situation is often neglected when studying competitive interactions. In northern temperate freshwaters, winter implies low temperatures and reduced food availability, but also strong reduction in ambient light because of ice and snow cover. Here, we study how brown trout [Salmo trutta (L.)] respond to variations in ice-cover duration and competition with Arctic charr [Salvelinus alpinus (L.)], by linking laboratory-derived physiological performance and field data on variation in abundance among and within natural brown trout populations. 2. Both Arctic charr and brown trout reduced resting metabolic rate under simulated ice-cover (darkness) in the laboratory, compared to no ice (6-h daylight). However, in contrast to brown trout, Arctic charr was able to obtain positive growth rate in darkness and had higher food intake in tank experiments than brown trout. Arctic charr also performed better (lower energy loss) under simulated ice-cover in a semi-natural environment with natural food supply. 3. When comparing brown trout biomass across 190 Norwegian lakes along a climate gradient, longer ice-covered duration decreased the biomass only in lakes where brown trout lived together with Arctic charr. We were not able to detect any effect of ice-cover on brown trout biomass in lakes where brown trout was the only fish species. 4. Similarly, a 25-year time series from a lake with both brown trout and Arctic charr showed that brown trout population growth rate depended on the interaction between ice breakup date and Arctic charr abundance. High charr abundance was correlated with low trout population growth rate only in combination with long winters. 5. In conclusion, the two species differed in performance under ice, and the observed outcome of competition in natural populations was strongly dependent on duration of the ice-covered period. Our study shows that changes in ice phenology may alter species interactions in Northern aquatic systems. Increased knowledge of how adaptations to winter conditions differ among coexisting species is therefore vital for our understanding of ecological impacts of climate change.     

Ecophysiological responses to warming events by two sympatric zooplankton species

Under current climate change scenarios, numerous lakes are predictedto experience increases in maximum temperatures and in the timing,frequency and duration of heat waves. To investigate the effectsof the magnitude and timing of thermal stress on zooplanktoncommunities we compared the thermal responses and seasonal phenologiesof two sympatric species, Epischura lacustris and Daphnia catawba.Thermal responses were measured in the laboratory as differencesin demography of field animals at temperatures characteristicof temperate lakes in spring, summer and autumn (15–30°C).Epischura lacustris had a significantly lower temperature tolerancethan D. catawba, which appears to explain differences in theirseasonal phenologies. Divergence in thermal tolerances and seasonalphenologies of these sympatric species strongly suggests thatthe response of the zooplankton community in this lake to warmingevents will differ greatly with the timing and severity of thethermal stress. Similar effects are to be expected in otherlakes containing these species and other zooplankton communities.     

Contributions of winter foraging to the annual growth of thermally dissimilar fish species

The seasonal energy dynamics of temperate fishes will likely be affected by climate change, especially during the winter. Few studies, however, have focused on winter. Fishes are more active in winter than previously thought, thus, an inquiry into the energetic contributions of winter foraging to the annual growth of fishes is needed given expected changes in winter conditions. We used stomach content data, total lipid analyses, and bioenergetics modeling to assess the effects of winter foraging on three species in Lake Champlain, Vermont, USA. We compared species in two thermal guilds, the cool-water species yellow perch (Perca flavescens) and two warm-water species, pumpkinseed (Lepomis gibbosus) and bluegill (Lepomis macrochirus). Our results indicate that winter energy dynamics likely depend on the thermal preference of individual fish species – the cool-water species foraged in all seasons whereas the two warm-water species foraged only in the open-water seasons. In addition, winter foraging provided sufficient energy for overwinter growth in cool-water species but not in warm-water species. Climate change will affect the seasonal energy dynamics that these species have evolved to survive winter conditions in temperate lakes. Thus, we expect climate change to affect individual survival and reproductive success.

     

Leading indicators of phytoplankton transitions caused by resource competition

Many important transitions in phytoplankton composition of lakes and oceans are related to shifts in nutrient supply ratios. Some phytoplankton transitions, such as cyanobacteria blooms in freshwater supplies and red tides in coastal oceans, are important for aquatic resource management. Therefore, it would be useful to have leading indicators which precede phytoplankton shifts and could be readily monitored in the field. We investigated potential indicators using a well-understood model of phytoplankton dynamics parameterized to mimic the transition toward cyanobacteria blooms in freshwater lakes. In stationary distributions, performance of the indicators depends on whether the species are capable of stable coexistence over a certain range of nutrient inputs. In transient simulations, however, indicators show consistent responses regardless of the possibility of stable coexistence. Leading indicators occurring 10 to 40 days prior to species shift include shift of lag-1 autoregression coefficient toward 0, low standard deviation, fluctuating skewness, and high kurtosis. These responses are different from those reported for critical transitions such as fold bifurcations. Thus, the indicators reveal clues to the mechanisms of important ecosystem transitions. In practice, indicators should be measured for multiple ecosystem variables, and interpretation of the indicators should be guided by experiments and mechanistic site-specific models to help resolve potential ambiguities.     

Phytoplankton and its dynamics in two tropical lakes: a tropical and temperate zone comparison

Temporal patterns of phytoplankton biomass and community structure are described for two Kenyan lakes and subsequently compared with patterns reported in other tropical and temperate lakes. Lake Naivasha had a lower and more seasonally variable (10×) biomass, with a seasonal shift between diatoms and blue-greens, while the L. Oloidien biomass was less variable (3.7×) and dominated by blue-greens. Biomass and chlorophyll a were strongly correlated and in turn were coupled to the level of total phosphorus. A total of 143 and 94 taxa were described for L. Naivasha and L. Oloidien, respectively.The comparative analysis showed: a) a paucity of exclusively tropical species; b) that more than 30 percent of the species in two highly saline Kenyan lakes were also present in the two freshwater lakes; c) no evidence for a postulated decline of phytoplankton species abundance with latitude from the temperate zone to the tropics; d) that the low fraction of chrysophyte biomass in tropical lakes is a function of trophy rather than of latitude; e) that the fraction of chlorophyte biomass in tropical lakes is generally higher than in temperate lakes; f) that the proportion of nannoplankton in the two Kenyan freshwater lakes is not different from that in temperate lakes of the same trophy; g) that seasonal or annual biomass oscillations in the tropics are not systematically lower than in the temperate zone; h) evidence for large inter-year difference in the max.:min. biomass ratio in the only tropical lake (L. Naivasha) for which such data are available; i) that an average biomass ratio appears predictable for tropical lakes from the proportion of the sediment surface in contact with epilimnetic water. Overall, no evidence was found that the freshwater tropical phytoplankton composition or dynamics differ in any fundamental fashion from that observed in the temperate lakes during the summer.Contribution number 147 of the Limnology Research Centre, McGill University.     

Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation

Aerobic anoxygenic phototrophic (AAP) bacteria are a phylogenetically diverse and ubiquitous group of prokaryotes that use organic matter but can harvest light using bacteriochlorophyll a. Although the factors regulating AAP ecology have long been investigated through field surveys, the few available experimental studies have considered AAPs as a group, thus disregarding the potential differential responses between taxonomically distinct AAP assemblages. Here, we used sequencing of the pufM gene to describe the diversity of AAPs in 10 environmentally distinct temperate lakes, and to investigate the taxonomic responses of AAP communities in these lakes when subjected to similar experimental manipulations of light and predator removal. The studied communities were clearly dominated by Limnohabitans AAP but presented a clear taxonomic segregation between lakes presumably driven by local conditions, which was maintained after experimental manipulations. Predation reduction (but not light exposure) caused significant compositional shifts across most assemblages, but the magnitude of these changes could not be clearly related to changes in bulk AAP abundances or taxonomic richness of AAP assemblages during experiments. Only a few operational taxonomic units, which differed taxonomically between lakes, were found to respond positively during experimental treatments. Our results highlight that different freshwater AAP communities respond differently to similar control mechanisms, highlighting that in‐depth knowledge on AAP diversity is essential to understand the ecology and potential role of these photoheterotrophs.     

Fish introductions reveal the temperature dependence of species interactions

A major area of current research is to understand how climate change will impact species interactions and ultimately biodiversity. A variety of environmental conditions are rapidly changing owing to climate warming, and these conditions often affect both the strength and outcome of species interactions. We used fish distributions and replicated fish introductions to investigate environmental conditions influencing the coexistence of two fishes in Swedish lakes: brown trout (Salmo trutta) and pike (Esox lucius). A logistic regression model of brown trout and pike coexistence showed that these species coexist in large lakes (more than 4.5 km²), but not in small, warm lakes (annual air temperature more than 0.9–1.5°C). We then explored how climate change will alter coexistence by substituting climate scenarios for 2091–2100 into our model. The model predicts that brown trout will be extirpated from approximately half of the lakes where they presently coexist with pike and from nearly all 9100 lakes where pike are predicted to invade. Context dependency was critical for understanding pike–brown trout interactions, and, given the widespread occurrence of context-dependent species interactions, this aspect will probably be critical for accurately predicting climate impacts on biodiversity.     

Patterns of coexistence of two species of freshwater turtles are affected by spatial scale

Inferring biotic interactions from the examination of patterns of species occurrences has been a central tenet in community ecology, and it has recently gained interest in the context of single-species distribution modelling. However, understanding of how spatial extent and grain size affect such inferences remains elusive. For example, would inferences of biotic interactions from broad-scale patterns of coexistence provide a surrogate for patterns at finer spatial scales? In this paper we examine how the spatial and environmental association between two closely related species of freshwater turtles in the Iberian Peninsula is affected by the geographical extent and resolution of the analysis. Species coexistence was compared across spatial scales using five datasets at varying spatial extents and resolutions. Both similarities in the two species’ use of space and in their responses to environmental variables were explored by means of regression analyses. We show that a positive association between the two species measured at broader scales can switch to a negative association at finer scales. We demonstrate that without examination of the effects of spatial scale when investigating biotic interactions using co-occurrence patterns observed at coarse resolutions, conclusions can be deeply misleading.     

Long-term coexistence of rotifer cryptic species

Despite their high morphological similarity, cryptic species often coexist in aquatic habitats presenting a challenge in the framework of niche differentiation theory and coexistence mechanisms. Here we use a rotifer species complex inhabiting highly unpredictable and fluctuating salt lakes to gain insights into the mechanisms involved in stable coexistence in cryptic species. We combined molecular barcoding surveys of planktonic populations and paleogenetic analysis of diapausing eggs to reconstruct the current and historical coexistence dynamics of two highly morphologically similar rotifer species, B. plicatilis and B. manjavacas. In addition, we carried out laboratory experiments using clones isolated from eight lakes where both species coexist to explore their clonal growth responses to salinity, a challenging, highly variable and unpredictable condition in Mediterranean salt lakes. We show that both species have co-occurred in a stable way in one lake, with population fluctuations in which no species was permanently excluded. The seasonal occurrence patterns of the plankton in two lakes agree with laboratory experiments showing that both species differ in their optimal salinity. These results suggest that stable species coexistence is mediated by differential responses to salinity and its fluctuating regime. We discuss the role of fluctuating salinity and a persistent diapausing egg banks as a mechanism for species coexistence in accordance with the 'storage effect'.     

Winning and losing with microbes: how microbially mediated fitness differences influence plant diversity

Interactions between plants and soil microbes can strongly influence plant diversity and community dynamics. Soil microbes may promote plant diversity by driving negative frequency‐dependent plant population dynamics, or may favor species exclusion by providing one species an average fitness advantage over others. However, past empirical research has focused overwhelmingly on the consequences of frequency‐dependent feedbacks for plant species coexistence and has generally neglected the consequences of microbially mediated average fitness differences. Here we use theory to develop metrics that quantify microbially mediated plant fitness differences, and show that accounting for these effects can profoundly change our understanding of how microbes influence plant diversity. We show that soil microbes can generate fitness differences that favour plant species exclusion when they disproportionately harm (or favour) one plant species over another, but these fitness differences may also favor coexistence if they trade off with competition for other resources or generate intransitive dominance hierarchies among plants. We also show how the metrics we present can quantify microbially mediated fitness differences in empirical studies, and explore how microbial control over coexistence varies along productivity gradients. In all, our analysis provides a more complete theoretical foundation for understanding how plant–microbe interactions influence plant diversity.     

The roles of harsh and fluctuating conditions in the dynamics of ecological communities

Harsh conditions (e.g., mortality and stress) reduce population growth rates directly; secondarily, they may reduce the intensity of interactions between organisms. Near-exclusive focus on the secondary effect of these forms of harshness has led ecologists to believe that they reduce the importance of ecological interactions, such as competition, and favor coexistence of even ecologically very similar species. By examining both the costs and the benefits, we show that harshness alone does not lessen the importance of species interactions or limit their role in community structure. Species coexistence requires niche differences, and harshness does not in itself make coexistence more likely. Fluctuations in environmental conditions (e.g., disturbance, seasonal change, and weather variation) also have been regarded as decreasing species interactions and favoring coexistence, but we argue that coexistence can only be favored when fluctuations create spatial or temporal niche opportunities. We argue that important diversity-promoting roles for harsh and fluctuating conditions depend on deviations from the assumptions of additive effects and linear dependencies most commonly found in ecological models. Such considerations imply strong roles for species interactions in the diversity of a community.