Isolation and characterization of polymorphic microsatellites in Labeo rohita and their cross‐species amplification in related species

The major Indian carps namely rohu (Labeo rohita), catla (Catla catla), mrigal (Cirrhinus mrigala) and calbasu (Labeo calbasu) are important freshwater species of the Indian subcontinent constituting over 65% of the fish produce. In the present study, isolation of 12 microsatellite loci from rohu has been reported. Cross‐species amplification in related carps and their implication in population genetic studies as well as selective breeding program were discussed.     

Trophic Classification of Non‐Perennial Reservoirs Utilized for the Development of Culture‐Based Fisheries,Sri Lanka

The aim of this study was to check the suitability of some trophic models developed for temperate regions to classify the non‐perennial reservoirs of Sri Lanka in order to manage culture‐based fisheries of those reservoirs. A limnological study was carried out in 45 non‐perennial reservoirs, which have been randomly selected for stocking of fish fingerlings for the development of culture‐based fisheries. High total phosphorous (TP) content in relation to algal biomass indicates high non‐algal turbidity in all reservoirs. Carlson's trophic state indices (TSI) measured on the basis of Secchi disc depth [TSI (SDD)], TP [TSI (TP)] and chlorophyll a [TSI (Chl‐a)] show that the 45 reservoirs studied are characterized by TSI (TP) = TSI (SDD) > TSI (Chl‐a), indicating that non‐algal particulate matter or colour dominates underwater light attenuation. As TSI (Chl‐a) is positively correlated to culture‐based fisheries yield, it is useful for planning culture‐based fisheries development strategies in non‐perennial reservoirs of Sri Lanka, and has the potential to be used elsewhere in the tropics for comparable developments. (© 2005 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Isolation of tannase‐producing microbiota from the gastrointestinal tracts of some freshwater fish

Tannins are the most abundant among the plant‐derived antinutrients that bind readily with protein and other macromolecules to form indigestible complexes, thereby reducing the nutritional value of the plant feedstuffs. Presence of tannase‐producing gut microbiota in herbivorous animals has been suggested to overcome the antinutritional effects of tannins. However, this topic has been less investigated in herbivorous/omnivorous fish species. The present study was undertaken to evaluate the presence of tannase‐producing autochthonous microbiota in the gastrointestinal (GI) tracts of some culturable freshwater teleosts and to identify most promising tannase‐producing strains by molecular methods. Isolation and enumeration of tannase‐producing autochthonous microbiota have been carried out in the gut of ten culturable freshwater teleosts, namely catla (Catla catla), silver carp (Hypophthalmichthys molitrix), rohu (Labeo rohita), grass carp (Ctenopharyngodon idella), mrigal (Cirrhinus mrigala), common carp (Cyprinus carpio), bata (Labeo bata), kalbasu (Labeo calbasu), tilapia (Oreochromis mossambicus), and Nile tilapia (Oreochromis niloticus). Culturable heterotrophic and tannase‐producing microbial populations evaluated on tryptone soya agar and selective tannic acid agar media, respectively, revealed the maximum in the hindguts of all fish species studied. Out of 72 tannase‐producing colonies, 18 randomly selected isolates were maintained as pure cultures and evaluated quantitatively for tannase production. Among these, four most promising tannase producers were identified by 16S/26S rDNA sequencing following nucleotide blast and deposited in the National Centre for Biotechnology Information (NCBI) GenBank. The strain LR01 isolated from rohu was a bacterium, Enterobacter asburae (GenBank Accession No. GU939631 ). However, the strains CM02, OM01 and LR03 isolated from mrigal, tilapia and rohu were yeasts and identified as Pichia kudriavzevii (GenBank Accession No. GU939629 ), Candida tropicalis (GenBank Accession No. GU911469 ) and Candida parapsilosis (GenBank Accession No. GU939630 ), respectively. To the authors' knowledge, the present study is the first to report tannase‐producing autochthonous microbiota in the gut of freshwater teleosts. Tannin‐degrading microbiota detected in the present study may endow the fish with some ecological advantages by enabling them to overcome the anti‐nutritional effects of plant tannins.     

The decline of the European eel Anguilla anguilla: quantifying and managing escapement to support conservation

A method was developed to quantify the number and biomass of European eels Anguilla anguilla escaping to the ocean for breeding. The non‐intrusive method, involving a fixed‐position, high‐frequency multi‐beam sonar, permitted constant surveillance of A. anguilla movements throughout their 5 month escapement season (July to December). During this period, >1000 individuals were monitored escaping to the Atlantic Ocean from their freshwater habitat in the River Huntspill study site (Somerset, U.K.). The total length of each fish was measured using the sonar software. These measurements were then converted to an estimate of mass using a length:mass regression relationship derived from historical fyke‐net data from this site, comprising c. 500 A. anguilla length:mass measurements collected over a 10 year period. The net biomass of escapement from the study site was equivalent to c. 6 kg ha^?1 year^?1, lower than the present European target which would require at least 7 kg ha^?1 year^?1 from this habitat. These findings demonstrate the capabilities of this monitoring technique and its usefulness both as a tool to assess the compliance with conservation targets and as a tool to evaluate the success of conservation measures for elusive aquatic species such as A. anguilla.     

TN : TP ratio and planktivorous fish do not affect nutrient-chlorophyll relationships in shallow lakes

1. In previous work, phytoplankton regulation in freshwater lakes has been associated with many factors. Among these, the ratio of total nitrogen to total phosphorus (TN : TP) has been widely proposed as an index to identify whether phytoplankton are N‐ or P‐limited. From another point of view, it has been suggested that planktivorous fish can be used to control phytoplankton. 2. Large‐scale investigations of phytoplankton biomass [measured as chlorophyll a, (chl‐a)] were carried out in 45 mid‐lower Yangtze shallow lakes to test hypotheses concerning nutrient limitation (assessed with TN : TP ratios) and phytoplankton control by planktivorous fish. 3. Regression analyses indicated that TP was the primary regulating factor and TN the second regulating factor for both annual and summer phytoplankton chl‐a. In separate nutrient–chl‐a regression analyses for lakes of different TN : TP ratios, TP was also superior to TN in predicting chl‐a at all particular TN : TP ranges and over the entire TN : TP spectrum. Further analyses found that chl‐a : TP was not influenced by TN : TP, while chl‐a : TN was positively and highly correlated to TP : TN. 4. Based on these results, and others in the literature, we argue that the TN : TP ratio is inappropriate as an index to identify limiting nutrients. It is almost impossible to specify a ‘cut‐off’ TN : TP ratio to identify a limiting nutrient for a multi‐species community because optimal N : P ratios vary greatly among phytoplankton species. 5. Lakes with yields of planktivorous fish (silver and bighead carp, the species native to China) >100 kg ha^?1 had significantly higher chl‐a and lower Secchi depth than those with yields <100 kg ha^?1. TP–chl‐a and TP–Secchi depth relationships are not significantly different between lakes with yields >100 kg ha^?1 or <100 kg ha^?1. These results indicate that the fish failed to decrease chl‐a yield or enhance Z_SD. Therefore, silver carp and bighead carp are not recommended as a biotic agent for phytoplankton control in lake management if the goal is to control the entire phytoplankton and to enhance water quality.     

The effect of different fertilizer treatments on water quality parameters in rice-cum-fish culture systems

A rice–fish culture experiment was conducted to determine the effects of different fertilizer treatments on water quality parameters, i.e. dissolved oxygen, temperature, pH and conductivity, as well as the nutrients nitrogen, potassium and phosphorus. Data gathered were subjected to analysis of variance. Dissolved oxygen, nitrogen and potassium concentrations showed significant differences (P<0.5) among the various rice‐cum‐fish management systems, with the highest mean concentration in the fish‐only management system. The insignificant difference (P>0.05) in the oxygen concentration between rice‐only and rice‐cum‐fish management systems was probably due to the narrow spacing of rice cultivars (20 × 20 cm). Under different fertilizer treatments, dissolved oxygen, nitrogen and potassium concentrations were not significantly different (P>0.05), indicating that different fertilizer treatments had no effect on their concentrations. Mean temperature, pH, conductivity and phosphorus concentrations in all rice‐cum‐fish management systems and fertilizer treatments did not differ significantly (P>0.05) from each other. This might possibly be due to the hydrogeology and climatic conditions of the area. However, all levels of studied water quality parameters were tolerable to the fish (Oreochromis niloticus) in the rice–fish ecosystem. There was no significant difference (P>0.05) in rice yield between the rice–fish management system and the rice‐only management system. However, there was a significant difference (P<0.05) under different fertilizer treatments, with nitrogen/phosphorus/potassium (NPK) (20 : 10 : 10) giving the highest production of an estimated 14.36 kg ha^?1 year^?1, indicating that fertilizer treatments had an effect on the rice yield. Fish growth was not significantly different (P>0.05) under different rice–fish management systems, but was significant (P<0.05) under different fertilizer treatments. Chicken manure gave the best growth with 17.7±5.97 g; estimated fish yields were 343 and 602 kg ha^?1 year^?1 in fish monoculture and rice–fish culture respectively. It is recommended that farmers who are more inclined to fish or rice production in integrated rice‐cum‐fish management systems could use chicken manure and NPK (20 : 10 : 10) respectively.     

Fisheries in Semi-Arid Northeast Brazil with Special Reference to the Role of Tilapias

The reservoir fisheries in the semi-arid Northeast Brazil have been studied based on the data collected by the Department of Action Against Droughts and placed against the background of what is known of similar fisheries in the tropics elsewhere. Of about 60,000 reservoirs in the region, DNOCS controls about 100 reservoirs since 1970. Physical characteristics are provided together with total areas of the reservoirs. Unfortunately very little basic limnological data are available. In all 42 species of fish and crustaceans were introduced into these reservoirs of which only fourteen fish species and one shrimp were successful in establishing self-propagating populations, others being stocked on a regular basis. The recent stocking of Colossoma macropomum and Cyprinus carpio are however unsuccessful in reservoirs. The fish yield of DNOCS controlled reservoirs for 1950–1990 was 112 kg.ha⁻¹ (Davies, 1972; Gurgel and Oliveira, 1987). It amounts now to about 20,000 tons annually taking into account incomplete and scaled down reporting of catches. This indicates a total fish catch from 60,000 reservoirs in the Northeast of Brazil of very substantial size. The CPUE and catches of all species and that of Tilapia rendalli and Oreochromis niloticus are given together with a discussion of the fisheries and recommendations for management. The total CPUE varied from 18–1,100 kg.ha⁻¹. However, most fishermen are only part-timers. It appears likely that very substantial yields of fish are being harvested in Northeast Brazil but are under-reported. Management strategies now in operation in reservoir fisheries are still very pragmatic. With the accumulation of data and generalizations, more viable strategies could be devised.     

Impact of Juvenile Stocking Size on the Major Carp Production in a Minor Reservoir,Bibinagar, India

The present study deals with the impact of juvenile stocking sizes of the major carp on production in a minor reservoir, Bibinagar, Nalgonda, India. Reservoir surface area equaled over 23.8 ha and water from the reservoir was used for irrigation and fisheries. Four experiments were conducted for 4 years from 2000–2001 to 2003–2004. The experiments were planned in such a way that every year juvenile stocking size was held constant and subsequent fish production analyzed. During the first year’s experiment (2000–2001) a stocking size of 25–30 mm (fry) was maintained. Similarly 50–55 (advanced fry), 75–80 mm (fingerling) and 100–105 mm (advanced fingerling) were stocked during 2001–2002, 2002–2003 and 2003–2004 respectively. Uniform yearly stocking densities (2000/ha) were established in each experiment in the month of July and fish were harvested in June of the subsequent year. Major carp production was enhanced with larger stocking size. Yearly productions equaled 144.00, 231.48, 632.91 and 1005.03 kg/ha/year with the above stocking sizes. Variation in stocking sizes had significant (P<0.05) effects on fish production. The number of fish per kg production decreased gradually with increases in stocking size with an average value of 3.97. Reservoir production of catla was the most abundant species, followed by rohu, common carp, mrigal and grass carp. These results show that stocking size has a great impact on fish production and the stocking of advanced fingerlings will provide maximum carp production in minor reservoirs in India.     

Impact of the removal of gizzard shad (Dorosoma cepedianum) on nutrient cycles in Lake Apopka,Florida

1. The St. Johns River Water Management District removed over 5.4 million kg of gizzard shad (Dorosoma cepedianum) from Lake Apopka, FL during 1993–2005, as a means of reducing lake phosphorus and phytoplankton concentrations and improving water clarity. Other steps included reduction of external nutrient inputs and operation of a treatment wetland. We measured nutrient excretion by Lake Apopka gizzard shad to quantify the nutrient effect of this biomanipulation. 2. Both N and P excretion were significantly affected by fish body mass and temperature. Larger fish had lower mass‐specific rates of excretion than smaller fish. 3. High water temperature increased P excretion to a much greater extent than N, resulting in a low N : P of nutrient excretion in midsummer. The N : P of excretion was lower than has been observed in other systems, probably because of higher water temperature. 4. Removal of gizzard shad >200 g prevented the annual release of 45 800 kg N year^?1 (3.46 kg N ha^?1 year^?1) and 7700 kg P year^?1 (0.62 kg P ha^?1 year^?1) on average. The actual impact on the P cycle varied substantially from year to year (range 7900–78 800 kg N year^?1; 1200–14 800 kg P year^?1), primarily because of fluctuations in the catch. 5. On an annual basis, the P directly removed in fish tissues was similar to that removed by the treatment wetland. The P excretion prevented by the removal of fish was approximately 20% of the reduction in external P loading achieved during 1993–2005. 6. In the short term, most of the P demand of planktonic primary producers is met through recycling of P, which greatly exceeds external P loading. Depending on population biomass, phosphorus excretion by the resident gizzard shad population was similar in magnitude to the P release by diffusive flux from the sediments.     

Density-dependent growth performance of Indian major carps in rainwater reservoirs

The study was carried out to evaluate growth performance of Indian major carps at different stocking densities in rainwater reservoirs. In this experiment, the absolute growth performance of Catla catla, Labeo rohita and Cirrhinus mrigala at stocking densities of 5000, 8000 and 11 000 fingerlings per hectare was 377.7, 215.4 and 241.9; 370.2, 186.7 and 219.1; and 306.7, 163.4 and 180.6 g, respectively. The recorded biomass yield at 5000, 8000 and 11 000 fingerlings per hectare was 1035, 1572 and 1573 kg ha^?1 per 180 days of culture. The effect of stocking density on production performance (performance index, PI) was highly significant (P < 0.05) at the higher stocking density of 11 000 ha^?1, while there was no significant variation between PI at stocking densities of 5000 and 8000 ha^?1. This indicates optimum production performance at 8000 ha^?1, where yield is significantly higher (P < 0.05) than yield at 5000 ha^?1 and almost equal to the yield at 11 000 ha^?1. An increase in stocking density from 8000 to 11 000 ha^?1, however, showed a sharp decline in average mean body weight of each species, even with supplemental feeding. With an increase in stocking density, the biomass yield increased to an optimum (1572 kg ha^?1), with no substantial increase thereafter. Reductions in growth, which occurred at high density, did not appear to be due to poor water quality as the water quality did not differ significantly among various treatments. Thus, the reduced survival and growth at high density appears to be a behavioural interaction or physiological response to density itself.     

Reproduction, growth, mortality and yield of Tilapia mariae Boulenger 1899 (Cichlidae) in a Nigerian rainforest wetland stream

The biology and fisheries of Tilapia mariae, the only tilapiine cichlid fish in the Iba Oku (Uyo, Nigeria) wetland stream was studied. There were more females than males in the population. The smallest sexually mature female fish was 11.0 cm total length (TL) while the size at 50% maturity was 17.1 cm TL. Absolute fecundity (F_e) ranged from 953 to 3200 eggs and was positively correlated with TL. The fish bred year‐round with peaks in November, March–April and July–September. The seasonalized von Bertalanffy growth function (VBGF) was fitted to the 12 consecutive months length–frequency data (n = 2439) to obtain a VBGF with the following parameters: L∞ (asymptotic length) = 30.4 cm TL, K (growth coefficient) = 0.4 year^?1, C (amplitude of growth oscillation) =0.4, and WP (winter point) = 0.9. The seasonalized length‐converted catch curve method gave Z (instantaneous total mortality coefficient) as 1.75 year^?1, M (instantaneous natural mortality coefficient) was 0.99 year^?1 while F (instantaneous fishing mortality coefficient) was 0.76 year^?1 and E (=F/Z the current exploitation rate) was 0.43. Length at first capture (Lc) was 17.7 cm TL. The fish was recruited to the fishery year‐round with two pulses. From the Beverton and Holt relative yield per recruit analysis via the selection ogive procedure, E_max (predicted maximum exploitation rate) was 0.54. The stock was not overexploited, since E < E_max. This study also showed that the fish is an r‐selected species with a few K‐selected traits.     

Effects of benthivorous bream (Abramis brama) and carp (Cyprinus carpio) on sediment resuspension and concentrations of nutrients and chlorophyll a

1. The effect of benthivorous bream and carp on sediment resuspension and the concentrations of nutrients and chlorophyll a were studied in sixteen experimental ponds (mean depth 1m, mean area 0.1 ha, sandy clay/clay sediment), stocked with bream or carp at densities varying from 0 to 500 kg ha^?1. Planktivorous perch (Perca fluviatilis L.) were added to some ponds to suppress zooplankton. 2. Suspended sediment concentrations increased linearly with biomass of benthivorous fish. Bream caused an increase of 46 g sediment m^?2 day^?1 per 100kg bream ha^?1 and a reduction of 0.38m^?1 in reciprocal Secchi disc depth, corresponding to an increase in the extinction coefficient of 0.34m^?1. 3. No relationship was found between size of fish and amount of resuspension, but the effect of bream was twice as great as that of carp. Benthivorous feeding was reduced in May because alternative food (zooplankton) was available. 4. Assuming a linear relationship, chlorophyll a level increased by 9.0 μgI^?1, total P by 0.03mgl^?1 and Kjeldahl-N by 0.48mgl^?1 per 100kg bream ha^?1. Silicate, chlorophyll a, total P and total N were all positively correlated with fish biomass, but orthophosphate showed no correlation.     

Comparison of maize,permanent cup plant and a perennial grass mixture with regard to soil and water protection

Agricultural production of biogas maize (Zea mays L.) causes hazards to aquatic ecosystems through high levels of nitrogen (N) inputs. Newly introduced and already established perennial crops such as the cup plant (Silphium perfoliatum L.) and perennial grass mixtures offer the possibility of more environmentally friendly agricultural bioenergy production. The objectives of this field study were to quantify and compare soil mineral N, water infiltration, water runoff, soil erosion and N leaching under maize, permanent cup plant, and a perennial grass mixture. The study was conducted from October 2016 to March 2019 in Braunschweig, Germany. Plots with cup plant and grass mixture exhibited lower mineral N contents than maize, especially between 30 and 90 cm soil depth. Soil water infiltration was significantly different between the three crops. The grass mixture had the highest infiltration rates (6.2 mm/min averaged across 3 years), followed by cup plant (3.6 mm/min) and maize (0.9 mm/min). During wet periods, higher N leaching was found for maize (up to 42 kg N ha^?1 year^?1) than for cup plant (up to 5 kg N ha^?1 year^?1) or the grass mixture (up to 11 kg N ha^?1 year^?1). While runoff and erosion for cup plant and the grass mixture were negligible during the study period, considerable amounts of runoff water and eroded sediment of up to 1.5 Mg ha^?1 year^?1 were collected from the maize plots despite the near flat terrain of the experimental field. Overall, permanent cup plant proved suitable as a component for energy cropping systems to reduce the risk of N leaching and soil erosion, which is particularly important for the preventive flood protection in view of the more frequent occurrence of high intensity rainfall under climate change conditions.     

Sorghum biomass production in the continental United States and its potential impacts on soil organic carbon and nitrous oxide emissions

National scale projections of bioenergy crop yields and their environmental impacts are essential to identify appropriate locations to place bioenergy crops and ensure sustainable land use strategies. In this study, we used the process‐based Daily Century (DAYCENT) model with site‐specific environmental data to simulate sorghum (Sorghum bicolor L. Moench) biomass yield, soil organic carbon (SOC) change, and nitrous oxide emissions across cultivated lands in the continental United States. The simulated rainfed dry biomass productivity ranged from 0.8 to 19.2 Mg ha^?1 year^?1, with a spatiotemporal average of  Mg ha^?1 year^?1, and a coefficient of variation of 35%. The average SOC sequestration and direct nitrous oxide emission rates were simulated as  Mg CO₂e ha^?1 year^?1 and  Mg CO₂e ha^?1 year^?1, respectively. Compared to field‐observed biomass yield data at multiple locations, model predictions of biomass productivity showed a root mean square error (RMSE) of 5.6 Mg ha^?1 year^?1. In comparison to the multi State (n = 21) NASS database, our results showed RMSE of 5.5 Mg ha^?1 year^?1. Model projections of baseline SOC showed RMSE of 1.9 kg/m² in comparison to a recently available continental SOC stock dataset. The model‐predicted N₂O emissions are close to 1.25% of N input. Our results suggest 10.2 million ha of cultivated lands in the Southern and Lower Midwestern United States will produce >10 Mg ha^?1 year^?1 with net carbon sequestration under rainfed conditions. Cultivated lands in Upper Midwestern states including Iowa, Minnesota, Montana, Michigan, and North Dakota showed lower sorghum biomass productivity (average: 6.9 Mg ha^?1 year^?1) with net sequestration (average: 0.13 Mg CO₂e ha^?1 year^?1). Our national‐scale spatially explicit results are critical inputs for robust life cycle assessment of bioenergy production systems and land use‐based climate change mitigation strategies.     

Performance of different fish species for controlling weeds in rainfed lowland rice field

A field experiment was conducted during wet season to evaluate the performance of different fish species for biocontrol of weeds in rainfed waterlogged rice fields with fingerlings of three exotic carps – grass carp, Ctenopharyngodon idella (Val.) (Cyprinidae, Cypriniformes), silver barb, Puntius gonionotus (Bleeker) (Cyprinidae, Cypriniformes) and common carp, Cyprinus carpio (L.) (Cyprinidae, Cypriniformes) – and three Indian major carps – rohu, Labeo rohita (Ham.) (Cyprinidae, Cypriniformes), catla, Catla catla (Ham.) (Cyprinidae, Cypriniformes), mrigal, Cirrhinus mrigala (Ham.) (Cyprinidae, Cypriniformes). A total of 13 major weeds under the categories of grassy, sedges, broadleaf and aquatic weeds were observed in the rice fields. Grass carp reduced maximum weed biomass (weed control efficiency [WCE] 63% at 60 days after transplanting [DAT] and 62% at 100 DAT) followed by silver barb and common carp. Among the Indian carps, only rohu was effective in control of weeds (WCE, 23% at 60 DAT). The grain yield of rice (variety Varshadhan) slightly increased (4.2–4.5 t/ha), but straw yield was significantly higher (10.2–10.7 t/ha) under rice-fish farming. Fish yield was significantly higher in exotic carps (270–288 kg/ha/90days) due to higher specific growth rates (1.8–2% body weight/day). The study indicated that exotic carps (grass carp, silver barb and common carp in order) were more effective than Indian carps for control of weed in rainfed lowland rice fields and among the Indian carps, rohu showed potential for weed control.     

Carbon dynamics,net primary productivity and human‐appropriated net primary productivity across a forest–cocoa farm landscape in West Africa

Terrestrial net primary productivity (NPP) is an important metric of ecosystem functioning; however, there are little empirical data on the NPP of human‐modified ecosystems, particularly smallholder, perennial crops like cocoa (Theobroma cacao), which are extensive across the tropics. Human‐appropriated NPP (HANPP) is a measure of the proportion of a natural system's NPP that has either been reduced through land‐use change or harvested directly and, previously, has been calculated to estimate the scale of the human impact on the biosphere. Additionally, human modification can create shifts in NPP allocation and decomposition, with concomitant impacts on the carbon cycle. This study presents the results of 3 years of intensive monitoring of forest and smallholder cocoa farms across disturbance, management intensity, distance from forest and farm age gradients. We measured among the highest reported NPP values in tropical forest, 17.57 ± 2.1 and 17.7 ± 1.6 Mg C ha^?1 year^?1 for intact and logged forest, respectively; however, the average NPP of cocoa farms was still higher, 18.8 ± 2.5 Mg C ha^?1 year^?1, which we found was driven by cocoa pod production. We found a dramatic shift in litterfall residence times, where cocoa leaves decomposed more slowly than forest leaves and shade tree litterfall decomposed considerably faster, indicating significant changes in rates of nutrient cycling. The average HANPP value for all cocoa farms was 2.1 ± 1.1 Mg C ha^?1 year^?1; however, depending on the density of shade trees, it ranged from ?4.6 to 5.2 Mg C ha^?1 year^?1. Therefore, rather than being related to cocoa yield, HANPP was reduced by maintaining higher shade levels. Across our monitored farms, 18.9% of farm NPP was harvested (i.e., whole cocoa pods) and only 1.1% (i.e., cocoa beans) was removed from the system, suggesting that the scale of HANPP in smallholder cocoa agroforestry systems is relatively small.     

Importance of disturbance history on net primary productivity in the world's most productive forests and implications for the global carbon cycle

Analysis of growth and biomass turnover in natural forests of Eucalyptus regnans, the world's tallest angiosperm, reveals it is also the world's most productive forest type, with fire disturbance an important mediator of net primary productivity (NPP). A comprehensive empirical database was used to calculate the averaged temporal pattern of NPP from regeneration to 250 years age. NPP peaks at 23.1 ± 3.8 (95% interquantile range) Mg C ha^?1 year^?1 at age 14 years, and declines gradually to about 9.2 ± 0.8 Mg C ha^?1 year^?1 at 130 years, with an average NPP over 250 years of 11.4 ± 1.1 Mg C ha^?1 year^?1, a value similar to the most productive temperate and tropical forests around the world. We then applied the age‐class distribution of E. regnans resulting from relatively recent historical fires to estimate current NPP for the forest estate. Values of NPP were 40% higher (13 Mg C ha^?1 year^?1) than if forests were assumed to be at maturity (9.2 Mg C ha^?1 year^?1). The empirically derived NPP time series for the E. regnans estate was then compared against predictions from 21 global circulation models, showing that none of them had the capacity to simulate a post‐disturbance peak in NPP, as found in E. regnans. The potential importance of disturbance impacts on NPP was further tested by applying a similar approach to the temperate forests of conterminous United States and of China. Allowing for the effects of disturbance, NPP summed across both regions was on average 11% (or 194 Tg C/year) greater than if all forests were assumed to be in a mature state. The results illustrate the importance of accounting for past disturbance history and growth stage when estimating forest primary productivity, with implications for carbon balance modelling at local to global scales.     

Changes in soil carbon stocks under perennial and annual bioenergy crops

Bioenergy crops are expected to provide biomass to replace fossil resources and reduce greenhouse gas emissions. In this context, changes in soil organic carbon (SOC) stocks are of primary importance. The aim of this study was to measure changes in SOC stocks in bioenergy cropping systems comparing perennial (Miscanthus × giganteus and switchgrass), semi‐perennial (fescue and alfalfa), and annual (sorghum and triticale) crops, all established after arable crops. The soil was sampled at the start of the experiment and 5 or 6 years later. SOC stocks were calculated at equivalent soil mass, and δ¹³C measurements were used to calculate changes in new and old SOC stocks. Crop residues found in soil at the time of SOC measurements represented 3.5–7.2 t C ha^?1 under perennial crops vs. 0.1–0.6 t C ha^?1 for the other crops. During the 5‐year period, SOC concentrations under perennial crops increased in the surface layer (0–5 cm) and slightly declined in the lower layers. Changes in δ¹³C showed that C inputs were mainly located in the 0–18 cm layer. In contrast, SOC concentrations increased over time under semi‐perennial crops throughout the old ploughed layer (ca. 0–33 cm). SOC stocks in the old ploughed layer increased significantly over time under semi‐perennials with a mean increase of 0.93 ± 0.28 t C ha^?1 yr^?1, whereas no change occurred under perennial or annual crops. New SOC accumulation was higher for semi‐perennial than for perennial crops (1.50 vs. 0.58 t C ha^?1 yr^?1, respectively), indicating that the SOC change was due to a variation in C input rather than a change in mineralization rate. Nitrogen fertilization rate had no significant effect on SOC stocks. This study highlights the interest of comparing SOC changes over time for various cropping systems.     

Ingestion of bacteria in suspension Indian major carps (Catla catla,Labeo rohita) and Chinese carps (Hypophthalmichthys molitrix,Aristichthys nobilis)

Single-species groups of fry of the planktivorous, filter-feeding carps (silver carp Hypophthalmichthys molitrix, bighead carp Aristichthys nobilis, rohu Labeo rohita and catla Catla catla) were exposed to the bacterium Chromobacterium violaceum to assess if they could detect or ingest unattached bacteria. The results indicate that planktivorous carp fry are able to ingest unattached bacteria and that the numbers ingested increase with time and with bacterial concentration in the media, although probably by passive means. It is also suggested that unattached bacteria are of little nutritional significance to carps.     

Biomass production and energy balance of Miscanthus over a period of 11 years: A case study in a large‐scale farm in Poland

Giant miscanthus (Miscanthus × giganteus Greef and Deuter) and Amur silver grass (Miscanthus sacchariflorus Maxim./Hack) are rhizomatous grasses with a C4 photosynthetic pathway that are widely cultivated as energy crops. For those species to be successfully used in bioenergy generation, their yields have to be maintained at a high level in the long term. The biomass yield (fresh and dry matter [DM] yield) and energy efficiency (energy inputs, energy output, energy gain, and energy efficiency ratio) of giant miscanthus and Amur silver grass were compared in a field experiment conducted in 2007–2017 in North‐Eastern Poland. Both species were characterized by high above‐ground biomass yields, and the productive performance of M. × giganteus was higher in comparison with M. sacchariflorus (15.5 vs. 9.3 Mg DM ha^?1 year^?1 averaged for 1–11 years of growth). In the first year of the experiment, the energy inputs associated with the production of M. × giganteus and M. sacchariflorus were determined at 70.5 and 71.5 GJ/ha, respectively, and rhizomes accounted for around 78%–79% of total energy inputs. In the remaining years of cultivation, the total energy inputs associated with the production of both perennial rhizomatous grasses reached 13.6–15.7 (M. × giganteus) and 16.9–17.5 GJ ha^?1 year^?1 (M. sacchariflorus). Beginning from the second year of cultivation, mineral fertilizers were the predominant energy inputs in the production of M. × giganteus (78%–86%) and M. sacchariflorus (80%–82%). In years 2–11, the energy gain of M. × giganteus reached 50 (year 2) and 264–350 GJ ha^?1 year^?1 (years 3–11), and its energy efficiency ratio was determined at 4.7 (year 2) and 18.6–23.3 (years 3–11). The energy gain and the energy efficiency ratio of M. sacchariflorus biomass in the corresponding periods were determined at 87–234 GJ ha^?1 year^?1 and 6.1–14.3, respectively. Both grasses are significant and environmentally compatible sources of bioenergy, and they can be regarded as potential energy crops for Central‐Eastern Europe.