Association of the OCA2 Polymorphism His615Arg with Melanin Content in East Asian Populations: Further Evidence of Convergent Evolution of Skin Pigmentation

The last decade has witnessed important advances in our understanding of the genetics of pigmentation in European populations, but very little is known about the genes involved in skin pigmentation variation in East Asian populations. Here, we present the results of a study evaluating the association of 10 Single Nucleotide Polymorphisms (SNPs) located within 5 pigmentation candidate genes (OCA2, DCT, ADAM17, ADAMTS20, and TYRP1) with skin pigmentation measured quantitatively in a sample of individuals of East Asian ancestry living in Canada. We show that the non-synonymous polymorphism rs1800414 (His615Arg) located within the OCA2 gene is significantly associated with skin pigmentation in this sample. We replicated this result in an independent sample of Chinese individuals of Han ancestry. This polymorphism is characterized by a derived allele that is present at a high frequency in East Asian populations, but is absent in other population groups. In both samples, individuals with the derived G allele, which codes for the amino acid arginine, show lower melanin levels than those with the ancestral A allele, which codes for the amino acid histidine. An analysis of this non-synonymous polymorphism using several programs to predict potential functional effects provides additional support for the role of this SNP in skin pigmentation variation in East Asian populations. Our results are consistent with previous research indicating that evolution to lightly-pigmented skin occurred, at least in part, independently in Europe and East Asia.     

Buxus in Europe: Late Quaternary dynamics and modern vulnerability

The suggested location of broadleaved evergreen trees in Europe during the last full-glacial has traditionally favoured a southerly refugial model, which proposes survival in the Mediterranean peninsulas and recolonization of central and northern Europe during the Holocene. This hypothesis is not always substantiated by thorough reviews of original past and modern occurrence data, or considered in the light of plant traits and autoecology. Our approach focuses on the genus Buxus with the aim of exploring (i) the relationship between the location of refugia and post-glacial population dynamics, (ii) past processes determining density, fragmentation and local extinctions of modern populations, and (iii) the vulnerability of Buxus in the context of the undergoing environmental changes. We compiled a database of over 3600 modern occurrences and 676 fossil sites to reconstruct the distribution of Buxus in Europe since 30 ka cal BP. The location of fossil finds and the plant traits of Buxus indicate that it persisted widely across its modern distribution through the last glacial period with modes varying from region to region. The E Pyrenees, W Alps, and Jura Mts hosted dense populations, which expanded exponentially during the whole Holocene, and resulted in a modern continuous distribution area. In contrast, the Mediterranean Peninsulas hosted sparse populations, which increased exponentially only during the first half of the Holocene, clearly decreased in the last 4.5 ka BP and resulted in a highly fragmented modern distribution area, most likely in relation to the climate trends towards dry conditions of the last few millennia. These results challenge the common view that the Mediterranean regions are the exclusive and most important refuge areas for evergreen broadleaved trees and stress the importance of considering long-term population dynamics based on fossil data to evaluate the vulnerability of modern fragmented plant populations in view of conservation actions.     

Cunoniaceae in the Cretaceous of Europe: Evidence from Fossil Flowers

Fossil flowers of the Cunoniaceae from Late Cretaceous sedimentsof southern Sweden are described in detail. The flowers aresmall, bisexual, actinomorphic, tetramerous with broadly attachedvalvate sepals; they have narrowly attached petals; eight stamensin two whorls; a massive, lobed nectary; a semi-inferior, syncarpousgynoecium with axile placentation; numerous ovules; separatestyles; and peltate, probably secretory, trichomes. They sharemany features with extant representatives of both the Cunoniaceaeand Anisophylleaceae. However, the gynoecium structure in particularindicates a closer relationship to the Cunoniaceae. The floralcharacters are not specific for any extant genus of the familyand therefore a new genus and species, Platydiscus peltatusgen. et sp. nov., is formally described. This is the first recordof cunoniaceous floral structures from the Northern Hemisphereand the oldest record of Cunoniaceae flowers worldwide. Copyright2001 Annals of Botany Company Anisophylleaceae, Cunoniaceae, fossil flowers, Late Cretaceous, Oxalidales, Platydiscus peltatus gen. et sp. nov., Santonian-Campanian, southern Sweden     

Development of Tonal Quality in Birdsong: Further Evidence from Song Sparrows

Song sparrow (Melospiza melodia) songs are composed largely of pure-tone notes. Song sparrows raised in acoustic isolation (i.e. never hearing conspecific songs) tend to produce half of their notes with harmonic overtones, an atypical tonal structure, suggesting that exposure to pure tones is necessary for the development of normal tonal quality. The experiment presented here directly investigated the influence of early exposure to songs with different tonal qualities on subsequent production. Seven young song sparrow males were exposed to 16 normal, pure-tone song sparrow songs and 6 males were exposed to the same 16 song types with added harmonic overtones. Birds in both groups learned equally well, confirming an earlier finding that tonal quality does not influence selection of models during the sensitive period for song acquisition. Birds exposed exclusively to harmonic song models, however, produced over 85% of their learned notes in a pure-tone fashion, even though they had never heard pure-tone sounds. Thus, pure tones do not need to be experienced directly by song sparrows, but exposure to some features of species-typical song models appears to facilitate the reproduction of models in a pure-tone fashion.     

Sauropod diversity in the Late Cretaceous of southwestern Europe: The lessons of odontology

Recent discoveries in southern France and northern Spain suggest that the morphology of titanosaurian teeth shows much greater variations that previously thought. It is suggested that the different morphotypes are informative at specific or generic level and that titanosaurian genera may indeed be recognized by their isolated teeth. It is also confirmed that juvenile titanosaurian teeth have a rather uniform, cylindrical morphology. Four different morphotypes are described for the Ibero-Armorican Island in the Late Cretaceous.     

Fast Principal-Component Analysis Reveals Convergent Evolution of ADH1B in Europe and East Asia

Searching for genetic variants with unusual differentiation between subpopulations is an established approach for identifying signals of natural selection. However, existing methods generally require discrete subpopulations. We introduce a method that infers selection using principal components (PCs) by identifying variants whose differentiation along top PCs is significantly greater than the null distribution of genetic drift. To enable the application of this method to large datasets, we developed the FastPCA software, which employs recent advances in random matrix theory to accurately approximate top PCs while reducing time and memory cost from quadratic to linear in the number of individuals, a computational improvement of many orders of magnitude. We apply FastPCA to a cohort of 54,734 European Americans, identifying 5 distinct subpopulations spanning the top 4 PCs. Using the PC-based test for natural selection, we replicate previously known selected loci and identify three new genome-wide significant signals of selection, including selection in Europeans at ADH1B. The coding variant rs1229984^∗T has previously been associated to a decreased risk of alcoholism and shown to be under selection in East Asians; we show that it is a rare example of independent evolution on two continents. We also detect selection signals at IGFBP3 and IGH, which have also previously been associated to human disease.     

Mutual Mate Assessment in Wolf Spiders: Differences in the Cues Used by Males and Females

When males engage in conspicuous courtship displays, it seems obvious that females would use characteristics of that display in mating decisions. However, males must also have a way to identify and evaluate females prior to engaging in what might be a costly mating ritual. Although it was known that female wolf spiders of the species Pardosa milvina (Araneae; Lycosidae) attract males using volatile chemical cues, the nature of the cues used by males and females in mate selection had not been investigated. Specifically we determined whether males could detect the mating status of the female and if chemotactile cues from the female played a role in that process. In addition, we quantified conspicuous aspects of the male courtship (leg raises and body shakes) to determine if courtship intensity was related to female choice. Although repeated mating occurred in our studies, males were more likely to court and mate with virgin females. Males used substrate‐borne cues deposited by females to discriminate between mated and virgin females. Females used the conspicuous behaviors of males during courtship, body shakes and leg raises, in mate selection. Thus males and females use different kinds of information and different sensory modalities to assess the suitability of a potential mate.     

How Sound Symbolism Is Processed in the Brain: A Study on Japanese Mimetic Words

Sound symbolism is the systematic and non-arbitrary link between word and meaning. Although a number of behavioral studies demonstrate that both children and adults are universally sensitive to sound symbolism in mimetic words, the neural mechanisms underlying this phenomenon have not yet been extensively investigated. The present study used functional magnetic resonance imaging to investigate how Japanese mimetic words are processed in the brain. In Experiment 1, we compared processing for motion mimetic words with that for non-sound symbolic motion verbs and adverbs. Mimetic words uniquely activated the right posterior superior temporal sulcus (STS). In Experiment 2, we further examined the generalizability of the findings from Experiment 1 by testing another domain: shape mimetics. Our results show that the right posterior STS was active when subjects processed both motion and shape mimetic words, thus suggesting that this area may be the primary structure for processing sound symbolism. Increased activity in the right posterior STS may also reflect how sound symbolic words function as both linguistic and non-linguistic iconic symbols.     

Health Gain by Salt Reduction in Europe: A Modelling Study

Excessive salt intake is associated with hypertension and cardiovascular diseases. Salt intake exceeds the World Health Organization population nutrition goal of 5 grams per day in the European region. We assessed the health impact of salt reduction in nine European countries (Finland, France, Ireland, Italy, Netherlands, Poland, Spain, Sweden and United Kingdom). Through literature research we obtained current salt intake and systolic blood pressure levels of the nine countries. The population health modeling tool DYNAMO-HIA including country-specific disease data was used to predict the changes in prevalence of ischemic heart disease and stroke for each country estimating the effect of salt reduction through its effect on blood pressure levels. A 30% salt reduction would reduce the prevalence of stroke by 6.4% in Finland to 13.5% in Poland. Ischemic heart disease would be decreased by 4.1% in Finland to 8.9% in Poland. When salt intake is reduced to the WHO population nutrient goal, it would reduce the prevalence of stroke from 10.1% in Finland to 23.1% in Poland. Ischemic heart disease would decrease by 6.6% in Finland to 15.5% in Poland. The number of postponed deaths would be 102,100 (0.9%) in France, and 191,300 (2.3%) in Poland. A reduction of salt intake to 5 grams per day is expected to substantially reduce the burden of cardiovascular disease and mortality in several European countries.     

Polyphyly and Convergent Morphological Evolution in Commelinales and Commelinidae: Evidence from rbcL Sequence Data

Phylogenetic relationships of the five families of the order Commelinales remain an area of deep uncertainty in higher-level monocot systematics, despite intensive morphological and anatomical study. To test the monophyly of the Commelinales and the subclass Commelinidae, evaluate their relationships, and analyze evolutionary trends in their morphology, ecology, and biogeography, we conducted parsimony analyses on 95 rbcL sequences representing 17 taxa of Commelinales, 16 taxa of other Commelinidae, and 63 taxa from Arecidae, Liliidae, and Zingiberidae. Commelinales is polyphyletic and Commelinidae paraphyletic, with Eriocaulaceae and Xyridaceae sister to Poaceae and its relatives, Rapateaceae sister to Bromeliaceae and Mayacaceae, and Commelinaceae sister to Philydrales and allies. Thurnia is sister to Prionium at the base of Cyperaceae-Juncaceae; only 1 of Cronquist's multifamily commelinoid orders is diagnosed as monophyletic. We propose a revised Commelinidae, incorporating 4 revised superorders (Bromelianae, Commelinanae, Dasypogonanae, Arecanae) and 10 orders ((Poales, Eriocaulales, Cyperales, Typhales, Bromeliales), (Commelinales, Philydrales, Zingiberales), (Dasypogonales), (Arecales)). Morphological and anatomical characters used to define the original Commelinales and Commelinidae appear to be plesiomorphic or to reflect convergence or recurrent mutation; several characters supporting our revised classification are anatomical traits that seem relatively insulated from environmental selection pressures. The Commelinidae distal to the Arecales arose in South America, with amphiatlantic Bromeliaceae-Mayacaceae-Rapateaceae originating in the Guayana Shield. Ecological diversification involved the repeated invasion of shady, infertile, or arid microsites. The numbers of species in families of the revised Commelinidae are related partly to the extent of adaptive radiation in those families, but seem more strongly related to nonadaptive features promoting speciation, such as restricted seed dispersal (especially in forest interior groups with fleshy fruits), polyploidy, aneuploidy, and apomixis. Species diversity is unrelated to the rate/amount of rbcL sequence evolution.     

Stabilization of Helical Order in the Thick Filaments by Blebbistatin: Further Evidence of Coexisting Multiple Conformations of Myosin

The degree of helical order of the thick filament of mammalian skeletal muscle is highly dependent on temperature and the nature of the ligand. Previously, we showed that there was a close correlation between the conformation of the myosin heads on the surface of the thick filaments and the extent of their helical order. Helical order required the heads to be in the closed conformation. In addition, we showed that, with the same ligand bound at the active site, three conformations of myosin coexisted in equilibrium. Hitherto, however, there was no detectable helical order as measured by x-ray diffraction under the temperatures studied for myosin with MgADP and the nucleotide-free myosin, raising the possibility that the concept of multiple conformations has limited validity. In this study, blebbistatin was used to stabilize the closed conformation of myosin. The degree of helical order is substantially improved with MgATP at low temperature or with MgADP or in the absence of nucleotide. The thermodynamic parameters of the disorder↔order transition and the characteristics of the ordered array were not significantly altered by binding blebbistatin. The simplest explanation is that the binding of blebbistatin increases the proportion of myosin in the closed conformation from being negligible to substantial. These results provide further evidence for the coexistence of multiple conformations of myosin under a wide range of conditions and for the closed conformation being directly coupled to helical order.