The time rate and mechanism of chromosome elimination in Hordeum hybrids

Seed development at 20±1° C in continuous light was studied during the first 5 days after pollination in diploid Hordeum vulgare, diploid H. bulbosum and the cross, H. vulgare x H. bulbosum, where H. bulbosum chromosomes were eliminated. Developing seeds were fixed and stained at known intervals after pollination and the embryo sac contents dissected out for cytological examination. — In all cases, the pattern of development was similar to that previously described for the Triticeae. After intraspecific pollination, the rate of endosperm and embryo development was significantly faster in H. vulgare than in H. bulbosum. In hybrid tissues, the rate was intermediate, but often much nearer to that of H. vulgare at first. Elimination of H. bulbosum chromosomes occurred only during endosperm and embryo mitoses. Usually, 0–3 chromosomes were lost at any one division but up to 7 were lost at some. Elimination, which occurred as early as zygotic anaphase, was nearly or quite complete in all dividing cells in both embryo and endosperm after 5 days. The mean number of chromosomes lost per nucleus per nuclear cycle was low at first but rose rapidly and stayed high for about a day in each tissue before falling quickly. The rate of elimination in each tissue was maximal when that tissue first synthesized significant amounts of new cytoplasm (day 2 after pollination in the endosperm and day 3 in the embryo). At mitosis, chromosomes being eliminated differed from others only in failing to congress at metaphase or to reach a pole at anaphase or both. — It is noted that in several widely different examples where either haploids are produced when only hybrids are expected, or where chromosomes of one species are preferentially eliminated from hybrid cells, nucleolar activity was suppressed in chromosomes of the genome which was selectively or preferentially eliminated. Consequently, it is suggested that chromosome elimination in Hordeum hybrids may be caused by a disturbed control of protein metablism in hybrid seeds and perhaps H. bulbosum chromosomes are selectively eliminated because they are less efficient than H. vulgare chromosomes at forming normal attachments to spindle protein.     

Selective chromosomal elimination during haploid formation in barley following interspecific hybridization

Cytological observations were made on embryo and endosperm tissues with different genome combinations that were produced by crossing the diploid and tetraploid cytotypes of Hordeum vulgare and H. bulbosum. The high frequency of barley haploids results from hybridization followed by the selective elimination of bulbosum chromosomes during the early development of embryos which initially contained a ratio of 1 vulgare to 1 bulbosum genomes. Elimination is gradual as indicated by the increase in the percentage of cells with the gametic chromosome number. However, the balance between genetic factors of the two parents appears to regulate the stability or elimination of chromosomes. Triploid embryos containing 1 vulgare to 2 bulbosum genomes are relatively stable. The most stable endosperm tissues examined had a ratio of 1 vulgare to 4 bulbosum genomes. Evidence of genetic control in both the vulgare and bulbosum chromosomes and their interaction is discussed. As has been suggested by Lange (1971) and also found in mammalian somatic cell hybrids, the most probable basis for selective chromosome elimination relates to mitotic rhythm and the duration of cell cycle phases.     

Genetic Control of Chromosome Elimination during Haploid Formation in Barley

Genetic control over chromosome stability in the interspecific hybrid embryos of Hordeum vulgare and H. bulbosum has been hypothesized to reside on specific chromosomes. In this study, crosses between the primary trisomic lines for the seven different H. vulgare chromosomes and tetraploid H. bulbosum revealed that both chromosomes 2 and 3 of H. vulgare were involved in the control of chromosome elimination. Subsequent crosses using the available monotelotrisomics for chromosomes 2 and 3 led to the conclusion that both arms of chromosome 2 and the short arm of chromosome 3 most likely contain major genetic factors.—From the results of this study and the genome balance observed in the interspecific crosses between H. vulgare and H. bulbosum at the diploid and tetraploid cytotypes, it appears that the factors causing the elimination of the bulbosum chromosomes are located on the H. vulgare chromosome. These factors are offset or balanced by factors on the H. bulbosum chromosomes which, when present in sufficient dosage, either neutralize the effects of the vulgare factors or are able to "protect" the bulbosum chromosomes.     

Electrophoretic Variation in Esterases, Peroxidases and Acid Phosphatases in Some Native Greek Taxa of the Genera Hordeum and Taeniatherum

Horizontal starch gel electrophoresis has been applied to thestudy of esterase, peroxidase and acid phosphatase patternsin seven taxa, namely Hordeum diploids (2n=14) (H. marinum,H. marinum I and H. hystrix), tetraploids (2n=28) (H. bulbosumand H. murinum subsp. leporinum) and Taeniatherum (2n=14) (T.caput-medusae and T. caput-medusae I) in order to elucidatetheir phylogenetic relationships. On the basis of our experimentalresults the seven taxa may be placed in the following threegroups; (1) diploid Hordeum (H. marinum, H. marinum I, H. hystrix);(2) tetraploid Hordeum (H. bulbosum, H. murinum subsp. leporinum);(3) Taeniatherum (T. caput-medusae, T. caput-medusae I). Esterase, peroxidase and acid phosphatase patterns of the twoHordeum diploid taxa (H. marinum and H. marinum I) are verysimilar suggesting their close phylogenetic relationship; thesame is true for both the taxa of the genus Taeniatherum (T.caput-medusae and T. caput-medusae I). The taxa of the Taeniatherumgroup compared with the diploid Hordeum (H. marinum, H. marinumI, H. hystrix) and the tetraploid Hordeum (H. bulbosum, H. murinumsubsp. leporinum) show a lower degree of phylogenetic relationshipand seem to be equally distant from them. The tetraploid Hordeumgroup shows a higher phylogenetic relationship with diploidHordeum group than with the Taeniatherum group. These results confirm that the genus Taeniatherum, previouslyconsidered as part of the genus Hordeum, should be regardedas a separate genus. Gramineae (Poaceae), Hordeum L., Taeniatherum Nevski., esterase, peroxidase and acid phosphatase patterns, phylogenetic relationships     

Phylogenetic analysis of the genus Hordeum using repetitive DNA sequences

A set of six cloned barley (Hordeum vulgare) repetitive DNA sequences was used for the analysis of phylogenetic relationships among 31 species (46 taxa) of the genus Hordeum, using molecular hybridization techniques. in situ hybridization experiments showed dispersed organization of the sequences over all chromosomes of H. vulgare and the wild barley species H. bulbosum, H. marinum and H. murinum. Southern blot hybridization revealed different levels of polymorphism among barley species and the RFLP data were used to generate a phylogenetic tree for the genus Hordeum. Our data are in a good agreement with the classification system which suggests the division of the genus into four major groups, containing the genomes I, X, Y, and H. However, our investigation also supports previous molecular studies of barley species where the unique position of H. bulbosum has been pointed out. In our experiments, H. bulbosum generally had hybridization patterns different from those of H. vulgare, although both carry the I genome. Based on our results we present a hypothesis concerning the possible origin and phylogeny of the polyploid barley species H. secalinum, H. depressum and the H. brachyantherum complex.     

Analysis of the genetic diversity of wild Spanish populations of the genusHordeum through the study of their endosperm proteins

A study was made of the genetic variability of 101 barley populations belonging to the four, wild, Spanish species of the genusHordeum (the autogamousH. marinum subspp.marinum andgussoneanum, andH. murinum subspp.murinum andleporinum, plus the allogamous speciesH. bulbosum andH. secalinum). Electrophoresis of endosperm proteins was performed using a large number of individuals from each population sampled, in order to determine intra- and interpopulational variation. The distribution of variability observed by population and taxonomic unit, is closely related to the breeding system.Hordeum bulbosum showed the greatest intrapopulational variability andH. marinum subsp.gussoneanum the least. In contrast to the autogamous species, the allogamous species showed low levels of interpopulational variation.     

The influence of temperature on chromosome elimination during embryo development in crosses involving Hordeum spp., wheat (Triticum aestivum L.) and rye (Secale cereale L.)

Summary Several interspecific and intergeneric crosses involving five Hordeum species, Triticum aestivum and Secale cereale were carried out to investigate the influence of two contrasting temperatures on chromosome elimination during embryo development. In four of the interspecific Hordeum crosses, chromosome elimination was significantly increased at the higher of the two temperatures, resulting in greater proportions of haploid plant progenies. However, there was no significant effect of temperature in the other interspecific cross between H. lechleri x H. bulbosum nor in the two intergeneric crosses between H. vulgare x S. cereale and T. aestivum x H. bulbosum whose progeny were exclusively hybrid and haploid, respectively.     

Effect of gamma irradiated Hordeum bulbosum pollen upon haploid frequency in barley following interspecific hybridization

Haploids (monoploids) can be produced in cultivated barley (Hordeum vulgare) by pollination with Hordeum bulbosum and the subsequent elimination of H. bulbosum chromosomes [13]. Pollen of H. bulbosum was gamma-irradiated at doses of 1 to 8 kR to determine if it would lead to a more rapid chromosome elimination and subsequently a higher frequency of haploid barley seedlings. Early embryo development was slower following low dosages of irradiation than at higher dosages and there was no significant improvement in haploid production. At higher dosages, the frequencies of seed set, embryos and haploid seedlings declined. Double fertilization is an apparent pre-requisite of haploid formation and the “intrinsic vigour” of the bulbosum nucleus after fertilization appears to be an important factor in this system of haploid formation.     

RAPD variation in wild populations of four species of the genus Hordeum (Poaceae)

 The genetic variation of 102 natural populations of wild barley growing in Spain was assessed using RAPDs (random amplified polymorphic DNA). The plant material included the annual species H. marinum subsp. marinum (22 populations) and subsp. gussoneanum (14), H. murinum subsp. murinum (7) and subsp. leporinum (35), and the perennial species H. bulbosum (17) and H. secalinum (7). Ten of the tested 64 arbitrary 10-mer primers amplified polymorphic DNA in all taxonomic units. Analyses was performed within and between populations, species and subspecies. The primers gave a total of 250 RAPD products. The level of polymorphism varied between taxonomic units depending on the primers employed and the plant reproductive system. In general, the most variable were the allogamous species H. secalinum and H. bulbosum and the autogamous H. marinum subsp. marinum. Among the amplified bands, 69 (27%) were shared by at least two different taxonomic units. The remaining bands were specific. The results demonstrate differences in the degree of similarity between taxonomic units. Jaccard’s similarity coefficients for interval measure within and between populations were used to produce a cluster diagram using the unweighted pair-group method (UPGMA). The different populations of the species and subspecies of Hordeum fell into three groups. The first group contained the populations belonging to both subspecies of H. marinum, plus those of H. secalinum. The populations of H. marinum subsp. gussoneanum were very closely associated. Those of H. marinum subsp. marinum were grouped in a broad cluster. The second group, occupying the innermost position of the tree, was very closely associated with the populations of both subspecies of H. murinum. The third branch segregated H. bulbosum. A series of RAPD markers were investigated by cleaving the amplified products of the same size with restriction endonucleases that recognize targets of 4- or 6-bp. The production of equivalent fragments following cleavage by the same enzyme would seem to demonstrate their homology in samples from different individuals, populations or taxonomic units. Received: 18 May 1997 / Accepted: 22 August 1997     

Chromosome elimination and chromosome pairing in tetraploid hybrids of Hordeum vulgare × H. bulbosum

Summary The C₀ tetraploid counterparts of diploid hybrids of Hordeum vulgare × H. bulbosum were meiotically analysed, and were found to be chromosomally less stable than the same genotypes had been as diploids. The 14 bulbosum chromosomes present in the tetraploid cytotypes were probably eliminated as pairs rather than randomly or one genome at the time. Development of the vulgare and bulbosum genomes was asynchronous in some hybrids, the bulbosum chromosomes appearing less advanced than the vulgare chromosomes in the same cell. This appeared to reduce pairing between bulbosum homologues and also suppressed homoeologous pairing.     

Karyotypes,nucleoli, and amphiplasty in hybrids between Hordeum vulgare L. and H. bulbosum L.

Chromosome measurements were carried out in Hordeum vulgare, H. bulbosum, and their diploid, triploid, and tetraploid hybrids. The chromosomes were classified by using relative values, and thus karyotypes were established. For comparison of these karyotypes both relative and absolute values were used. It was concluded that differential amphiplasty occurred, whereas neutral amphiplasty could not be demonstrated. In the hybrids the relative length of the parts of the chromosomes (long arm, short arm, satellite) was not changed in comparison with these lengths in the pure species. The karyotypes of both species had considerable similarities. From comparing the mean absolute genome lengths, it was, however, concluded that in the pure species, as well as in all hybrid types, the chromosomes of H. vulgare were longer than those of H. bulbosum. In the diploid and tetraploid hybrids the mean genome lengths were shorter than those in the pure species and the triploid hybrids. The differential amphiplasty was such that the secondary constriction of chromosome 6 of H. bulbosum, did not show up in the hybrids. This could be related to the suppression of nucleolar formation in the genome of H. bulbosum, because the maximum number of nucleoli in root tip cells equalled the number of satellite chromosomes. Finally it was found that the pattern of nucleolar fusion in diploid and triploid hybrids deviated from the expectation. The results were discussed in relation to chromosomal disturbances that occurred in the hybrid tissues and that resulted in elimination of chromosomes and other effects.     

Ribosomal DNA repeat unit polymorphism in 25 Hordeum species

Summary Tandemly repeated DNA sequences containing structural genes encoding ribosomal RNA (rDNA) were investigated in 25 species of Hordeum using the wheat rDNA probe pTA71. The rDNA repeat unit lengths were shown to vary between 8.5 and 10.7 kb. The number of length classes (1–3) per accession generally corresponded to the number of nucleolar organizing regions (NORs). Intraspecific variation was found in H. parodii, H. spontaneum and H. leporinum, but not in H. bulbosum. Restriction analysis showed that the positions of EcoRI, SacI and certain BamHI cleavage sites in the rRNA structural genes were highly conserved, and that repeat unit length variation was generally attributable to the intergenic spacer region. Five rDNA BamHI restriction site maps corresponded to the following groups of species: Map A — H. murinum, H. glaucum, H. leporinum, H. bulbosum, H. marinum, H. geniculatum; Map B — H. leporinum; Map C — H. vulgare, H. spontaneum, H. agriocrithon; Map D — H. chilense, H. bogdanii; and Map E — remaining 14 Hordeum species. The repeat unit of H. bulbosum differed from all other species by the presence of a HindIII site. The closer relationship of H. bulbosum to H. leporinum, H. murinum and H. glaucum than to H. vulgare was indicated by their BamHI restriction maps.Contribution No. 1169, Plant Research Centre     

Barley doubled-haploid production by uniparental chromosome elimination

Uniparental elimination of chromosomes, which occurs in interspecific crosses between Hordeum vulgare (cultivated barley) and H. bulbosum (bulbous barley grass), is a process which can be used to produce doubled-haploid barley plants in breeding programs. We review the procedure of haploid production and the mechanism underlying selective elimination of one of the genomes during the early development of species hybrid embryos.     

Haploidy from Hordeum interspecific crosses

Summary Interspecific crosses of Hordeum parodii (2n = 42) with H. bulbosum (2n = 14 or 28) and H. vulgare (2n = 14;, and of H. proaerum (2n = 42) with H. bulboswn, H. vulgare and H. parodii were made. Crosses between parodii and diploid bulbosum resulted in haploids (2n = 21) of parodii, whilst the crosses of parodii by tetraploid bulbosum or diploid vulgare gave hybrid progeny. The procerum by diploid bulbosum cross invariably produced haploids (2n = 21) of procerum, whereas procerum by tetraploid bulbosum or diploid vulgare crosses resulted in both hybrids and haploids of procerum. The cross between procerum and parodii gave hybrid progeny which did not reach maturity.Cytological observations on two-week-old embryos obtained from reciprocal crosses revealed chromosome variability (not less than 21 in any cell) in haploid producing crosses. This shows that chromosome elimination leads to haploid formation irrespective of which species was used as female parent.The results indicate that the ratio of the parental genomes in the zygote determines whether predominantly haploids or hybrids will be produced in any cross combination. Furthermore, procerum appears to be not only more efficient in eliminating bulbosum chromosomes in comparison with parodii, but also capable of eliminating vulgare chromosomes. The possibility of stability factors in overcoming chromosome elimination, a hierarchy of chromosome elimination and the general existence of genome balance for chromosome stability in interspecific crosses, are discussed.     

Chromosome instability in Hordeum vulgare x H. bulbosum hybrids

Chromosome number in Hordeum vulgare x H. bulbosum hybrids ranged between the haploid and diploid number but with peaks in frequency occurring at the 14 and 7 chromosome level. This was reflected in a gradual change from hybrid morphology to that of haploid H. vulgare. The rate of chromosome elimination differed significantly between hybrids, while within each hybrid, differences in mean chromosome number were recorded between and within individual tillers. An increase in temperature from 25–30° C caused a significant increase in the rate of elimination of H. bulbosum chromosomes.     

Haploidy from Hordeum interspecific crosses

Summary Hordeum arizonicum (2n=42) and H. lechleri (2n=42) were crossed with both H. bulbosum (2n=14 or 28) and H. vulgare (2n=14 or 28) and progeny plants were obtained through embryoculture. Crosses of arizonicum with diploid bulbosum invariably resulted in haploids (2n=21) of arizonicum, whereas arizonicum by tetraploid bulbosum or diploid vulgare crosses produced both hybrids and haploids of arizonicum. The lechleri by diploid bulbosum or diploid vulgare crosses resulted in haploids of lechleri, while lechleri by tetraploid bulbosum resulted in well differentiated embryos which failed to germinate.Hybrid embryos derived from the haploid producing crosses exhibit chromosome variability, suggesting that chromosome elimination leads to haploid formation.The results also indicate that the ratio of the parental genomes in the zygote is a critical factor which determines the chromosome elimination or stability in any cross combination. Furthermore, both arizonicum and lechleri appear to be of similar genetic strength in eliminating bulbosum and vulgare chromosomes. The possibility of stability factors in overcoming elimination and manipulation towards elimination are discussed.     

Cytogenetic diversity of SSR motifs within and between Hordeum species carrying the H genome: H. vulgare L. and H. bulbosum L.

Non-denaturing FISH (ND-FISH) was used to compare the distribution of four simple sequence repeats (SSRs)—(AG) _n , (AAG) _n , (ACT) _n and (ATC) _n —in somatic root tip metaphase spreads of 12 barley (H. vulgare ssp. vulgare) cultivars, seven lines of their wild progenitor H. vulgare ssp. spontaneum, and four lines of their close relative H. bulbosum, to determine whether the range of molecular diversity shown by these highly polymorphic sequences is reflected at the chromosome level. In both, the cultivated and wild barleys, clusters of AG and ATC repeats were invariant. In contrast, clusters of AAG and ACT showed polymorphism. Karyotypes were prepared after the identification of their seven pairs of homologous chromosomes. Variation between these homologues was only observed in one wild accession that showed the segregation of a reciprocal translocation involving chromosomes 5H and 7H. The two subspecies of H. vulgare analysed were no different in terms of their SSRs. Only AAG repeats were found clustered strongly on the chromosomes of all lines of H. bulbosum examined. Wide variation was seen between homologous chromosomes within and across these lines. These results are the first to provide insight into the cytogenetic diversity of SSRs in barley and its closest relatives. Differences in the abundance and distribution of each SSR analysed, between H. vulgare and H. bulbosum, suggest that these species do not share the same H genome, and support the idea that these species are not very closely related. Southern blotting experiments revealed the complex organization of these SSRs, supporting the findings made with ND-FISH.     

Haploidy from Hordeum interspecific crosses

Summary Interspecific crosses of Hordeum brachyantherum (2n = 28) and H. depressum (2n = 28) with H. bulbosum (2n = 14 or 28) and H. vulgare (2n = 14 or 28) were made. Crosses between brachyantherum and diploid bulbosum resulted in dihaploids (2n = 14) of brachyantherum and hybrids (2n = 21), whilst the crosses of brachyantherum by tetraploid bulbosum or vulgare gave hybrid progeny. Similarly, crosses between H. depressum and diploid bulbosum resulted in dihaploids (2n = 14) of depressum and hybrids (2n = 21), whereas depressum by tetraploid bulbosum or vulgare invariably produced hybrids.Cytological observations on 12 day old embryos obtained from these crosses revealed chromosome variability down to 14 in crosses with diploid bulbosum indicating thereby that chromosome elimination leads to haploid formation. Embryonic cells from the brachyantherum by diploid vulgare cross also exhibited a certain degree of chromosomal instability as micronuclei.The results indicate that the ratio of parental genomes in the zygote determines whether haploids or hybrids will be produced in crosses of brachyantherum or depressum with bulbosum. Furthermore, brachyantherum appears to be more efficient in eliminating bulbosum chromosomes in comparison with depressum.     

The distribution, organization and evolution of two abundant and widespread repetitive DNA sequences in the genus Hordeum

The genomic organization and chromosomal distributions of two abundant tandemly repeated DNA sequences, dpTa1 and pSc119.2, were examined in six wild Hordeum taxa, representing the four basic genomes of the genus, by Southern and fluorescence in situ hybridization. The dpTa1 probe hybridized to between 30 and 60 sites on the chromosomes of all five diploid species studied, but hybridization patterns differed among the species. Hybridization of the pSc119.2 sequence to the chromosomes and Southern blots of digested DNA detected signals in Hordeum bulbosum, Hordeum chilense, Hordeum marinum and Hordeum murinum 4x, but not in Hordeum murinum 2x and Hordeum vulgare ssp. spontaneum. A maximum of one pSc119.2 signal was observed in the terminal or subterminal region of each chromosome arm in the species carrying this sequence. The species carrying the same I-genome differed in the presence (Hordeum bulbosum) or absence (Hordeum spontaneum) of pSc119.2. The presence of pSc119.2 in the tetraploid cytotype of Hordeum murinum, but its absence in the diploid cytotype, suggests that the tetraploid is not likely to be a simple autotetraploid of the diploid. Data about the inter- and intra-specific variation of the two independent repetitive DNA sequences give information about both the interrelationships of the species and the evolution of the repetitive sequences. Received: 17 March 1999 / Accepted: 16 June 1999     

Identification and distribution of Puroindoline b-2 variant gene homologs in Hordeum

The barley hordoindoline genes (Hina and Hinb) are homologous to the wheat puroindoline genes (Pina and Pinb). These genes are involved in grain hardness, which is an important quality for barley processing. We identified novel variants of Hina and Hinb in 10 wild Hordeum species (H. bogdanii, H. brachyantherum, H. bulbosum, H. chilense, H. comosum, H. marinum, H. murinum, H. patagonicum, H. pusillum, and H. roshevitzii) covering all Hordeum genomes and preliminarily named them Hinc. These nucleotide sequences were highly similar to those of Puroindoline b-2 variant genes (Pinb-2v) and were located on chromosome 7I in H. chilense. The Hinc genes in H. bogdanii, H. bulbosum, H. patagonicum, and H. roshevitzii were pseudogenes possessing in-frame stop codons. We also found a partial Hinc sequence in H. murinum. This gene was not found in cultivated barley and H. vulgare subsp. spontaneum. The phylogenetic tree of Gsp-1, Hin, and Pin genes demonstrates that Hinc and Pinb-2v genes formed one cluster. Therefore, we considered that Hinc and Pinb-2v genes shared a common ancestral gene and were homologous to each other. We also studied the evolutional process of Gsp-1, Hin, and Pin genes. Our results suggested that Gsp-1 might be the most closely related to a putative ancestral gene on Ha locus.