Upland Soil Charcoal in the Wet Tropical Forests of Central Guyana

A soil charcoal survey was undertaken across 60,000 ha of closed-canopy tropical forest in central Guyana to determine the occurrence, ubiquity, and age of past forest fires across a range of terra firme soil types. Samples were clustered around six centers consisting of spatially nested sample stations. Most charcoal was found between 40 and 60 cm depth with fewest samples yielding material at 0–20 cm depth. The first core yielded charcoal at most stations. Charcoal ages of a random subsample ranged from less than 200 YBP to 9500 YBP with a noticeable peak between 1000 and 1250 YBP. Results reinforce a view that most closed-canopy tropical forests in eastern Amazonia have been subject to palaeo-fire events of unknown severity with a peak in charcoal age consistently appearing between 1000 and 2000 YBP. The two samples dated to the early Holocene represent some of the oldest indicators of paleo-fire known from upland Neotropical forest soils. Ubiquitous soil charcoal in central Guyana further indicate both forest resilience to fire and the widespread propensity for regional forests to burn, particularly during anomalous periods of drought.     

Soil Charcoal in Old-Growth Rain Forests from Sea Level to the Continental Divide

Soil charcoal is an indicator of Holocene fires as well as a palaeoecological signature of pre-Colombian land use in Neotropical rain forests. To document rain forest fire history, we examined soil charcoal patterns in continuous old-growth forests along an elevational transect from sea level to the continental divide on the Atlantic slope of Costa Rica. At 10 elevations we sampled 1-ha plots, using 16 cores/ha to collect 1.5-m deep soil samples. We found charcoal in soils at every elevation, with total dry mass ranging from 3.18 g/m² at 2000-m elevation to as much as 102.7 g/m² at 300 m. Soil charcoal is most abundant at the wettest lowland sites (60–500 m) and less at montane elevations (> 1000 m) where there is less rainfall. Between 30- and 90-cm soil depth, soil charcoal is present consistently and every 1-ha plot has charcoal evidence for multiple fire events. Radiocarbon dates range from 23,240 YBP at 1750-m elevation to 140 YBP at 2600 m. Interestingly, none of the charcoal samples from 2600 m are older than 170 yr, which suggests that forests near the continental divide are relatively young replacement stands that have re-established since the most recent localized volcanic eruption on Volcán Barva. We propose that these old-growth forests have been disturbed infrequently but multiple times as a consequence of anthropogenic and natural fires.     

Spatial Scaling Effects on Soil Bacterial Communities in Malaysian Tropical Forests

Spatial scaling to some extent determines biodiversity patterns in larger organisms, but its role in microbial diversity patterns is much less understood. Some studies have shown that bacterial community similarity decreases with distance, whereas others do not support this. Here, we studied soil bacterial communities of tropical rainforest in Malaysia at two spatial scales: a local scale with samples spaced every 5 m over a 150-m transect, and a regional scale with samples 1 to 1,800 km apart. PCR-amplified soil DNA for the bacterial 16S rRNA gene targeting the V1–V3 region was pyrosequenced using Roche/454 GS FLX Titanium platform. A ranked partial Mantel test showed a weak correlation between spatial distance and whole bacterial community dissimilarity, but only at the local scale. In contrast, environmental distance was highly correlated with community dissimilarity at both spatial scales, stressing the greater role of environmental variables rather than spatial distance in determining bacterial community variation at different spatial scales. Soil pH was the only environmental parameter that significantly explained the variance in bacterial community at the local scale, whereas total nitrogen and elevation were additional important factors at the regional scale. We obtained similar results at both scales when only the most abundant OTUs were analyzed. A variance partitioning analysis showed that environmental variables contributed more to bacterial community variation than spatial distance at both scales. In total, our results support a strong influence of the environment in determining bacterial community composition in the rainforests of Malaysia. However, it is possible that the remaining spatial distance effect is due to some of the myriad of other environmental factors which were not considered here, rather than dispersal limitation.     

Using the Ecological Risk Index Based on Combined Watershed and Administrative Boundaries to Assess Human Disturbances on River Ecosystems

Efforts at the restoration of river ecosystems are needed not only in local habitats but are also important in terrestrial regions. Large-scale assessment of human activities can be useful in integrated watershed management. In this study, we modified the Ecological Risk Index (ERI) by considering the spatial distribution of human activities in China's Haihe River Basin (HRB). The stressor factors of human activities included population, impervious surface, cattle, agricultural land use, industry, fertilizers, pesticides, water conservation facilities, and roads. A total of 423 assessment units in the HRB were created by combining watershed and administrative boundaries to analyze the spatial distribution of human activities. Two index options, the ERI (including all stressors) and the ERI-D (excluding reservoirs and sluices), were examined for different management objectives. All the stressors and both ecological risk indices (ERI and ERI-D) were ranked in four levels: low, moderate, high, and very high. Our study demonstrated that the ERI and ERI-D can provide an overview of the spatial pattern of human stressors related to river ecosystems across a large geographic region. The approach developed in this study is useful for prioritizing management actions in targeted areas.     

Influence of Environmental Factors on the Structure of Soil Microfungi of Vietnamese Tropical Forests

Results of a multiyear complex study of species diversity, features and patterns of distribution, substrate colonization, and ecology of soil microscopic fungi in the lowland, piedmont, and mountain monsoon rain forests of Vietnam are presented for the first time. In 97 forest habitats studied within 13 specially protected areas of Vietnam in the Northern, Central, and Southern parts of the country, 510 species of micromycetes from 148 genera have been identified. The influence of environmental factors (climatic features, relief, soils, forest types, etc.) on the formation of complexes of micromycetes has been analyzed. As a result, the dependence of the number of colony-forming units (CFUs) on the type of the substrate and the season (wet/dry) is established: significantly more species are detected in the dry season (October–March) (p < 0.05) in comparison with the wet one; many species are associated with certain plant species. Indicators of species diversity decrease with an increase above sea level altitude (p < 0.01). Herewith, the ratio of the taxonomic groups of micromycetes also consistently changes. A latitudinal–zonal trend of the change of the species composition of microscopic fungi, determined by a combination of environmental factors, has been revealed.     

Simulating the Long-term Response of Tropical Wet Forests to Fragmentation

In the coming decades, a large fraction of the world's tropical forests will be fragmented into remnants surrounded by secondary vegetation, land-use areas, or roads. It is important to develop integrative tools to monitor the evolution of these fragmented ecosystems. We used the individual-oriented and process-based forest growth simulator FORMIND2.0 to investigate the spatial and temporal effects on standing biomass and functional diversity of various intensities and patterns of fragmentation within a forest landscape. The simulator was calibrated for an old-growth wet forest in French Guiana, South America. We found that the standing biomass of forest remnants was reduced significantly compared to a similar area of nonfragmented forest. When fewer but larger remnants were created rather than many small ones, the total loss in biomass and the increase in the abundance of early-successional species were significantly reduced, confirming that edge effects dominate the functioning of forest remnants. We also performed simulations of secondary succession after the landscape had been abandoned. The simulated recovery time in those secondary forests depends on both the size of cleared area and the spatial pattern of the remnant forests. Received 30 January 2002; accepted 16 July 2002.     

Heterotrophic Soil Respiration in Relation to Environmental Factors and Microbial Biomass in Two Wet Tropical Forests

We examined the correlation between fungal and bacterial biomass, abiotic factors such as soil moisture, carbon in the light soil fraction and soil nitrogen to a depth of 0–25 cm and heterotrophic soil respiration using a trenching technique – in a secondary forest (Myrcia splendens, Miconia prasina and Casearia arborea) and a pine (Pinus caribeae) plantation in the Luquillo Experimental Forest in Puerto Rico. Soil respiration was significantly reduced where roots were excluded for 7 years in both the secondary forest and the pine plantation. Microbial biomass was also significantly reduced in the root exclusion plots. In root exclusion treatment, total fungal biomass was on average 31 and 65% lower than the control plots in the pine plantation and the secondary forest, respectively, but the total bacterial biomass was 24 and 8.3% lower than the control plots in the pine plantation and the secondary forest, respectively. Heterotrophic soil respiration was positively correlated with fungal biomass (R²=0.63, R²=0.39), bacterial biomass (R²=0.16, R²=0.45), soil moisture (R²=0.41, R²=0.56), carbon in light fraction (R²=0.45, R²=0.39) and total nitrogen (R²=0.69, R²=0.67) in the pine plantation and the secondary forest, respectively. The regression analysis suggested that fungal biomass might have a greater influence on heterotrophic soil respiration in the pine plantation, while the bacterial biomass might have a greater influence in the secondary forest. Heterotrophic soil respiration was more sensitive to total N than to carbon in the light fraction, and soil moisture was a major factor influencing heterotrophic soil respiration in these forests where temperature is high and relatively invariable.     

Temporal Dynamics in Soil Oxygen and Greenhouse Gases in Two Humid Tropical Forests

Soil redox plays a key role in regulating biogeochemical transformations in terrestrial ecosystems, but the temporal and spatial patterns in redox and associated controls within and across ecosystems are poorly understood. Upland humid tropical forest soils may be particularly prone to fluctuating redox as abundant rainfall limits oxygen (O₂) diffusion through finely textured soils and high biological activity enhances O₂ consumption. We used soil equilibration chambers equipped with automated sensors to determine the temporal variability in soil oxygen concentrations in two humid tropical forests with different climate regimes. We also measured soil trace gases (CO₂, N₂O, and CH₄) as indices of redox-sensitive biogeochemistry. On average, the upper elevation cloud forest had significantly lower O₂ concentrations (3.0 ± 0.8%) compared to the lower elevation wet tropical forest (7.9 ± 1.1%). Soil O₂ was dynamic, especially in the wet tropical forest, where concentrations changed as much as 10% in a single day. The periodicity in the O₂ time series at this site was strongest at 16 day intervals and was associated with the hourly precipitation. Greenhouse gas concentrations differed significantly between sites, but the relationships with soil O₂ were consistent: O₂ was negatively related to both CO₂ and CH₄ and positively related to N₂O. These results are among the first to quantify the temporal and spatial scale of variability in soil redox in humid tropical forests, and show that the timing of precipitation plays a strong role in biogeochemical cycling on the scale of hours to weeks.     

Aquatic Macrophyte Approach to Assess the Impact of Disturbances on the Diversity of the Ecosystem and on River Quality

Disturbance has long been recognized as an important determinant of community characteristics in aquatic systems. The aims of our study were to evaluate the impact of different disturbances on the macrophyte diversity and on river quality. To this end, we investigated the floristic composition for different stretches impacted by disturbances and we tested both diversity indices and the trophic index (IBMR) “Biological Index Macrophytes in Rivers” in the Moselle river (NE of France). The river was divided into four sections of different lengths based on uniformity of morphological characteristics, substrate conditions and flowing velocity: the upper, the wild, the resectioned and the downstream Moselle. Floristic composition and water chemical parameters were analysed from 1999 to 2001. The man‐made increase of nutrient concentration favoured the floristic richness in the last sites of the upper Moselle, whereas river dynamics and floods did not allow the development of vegetation in the wild Moselle. Disturbances caused by industrial sewage and eutrophication allowed the spreading of pollu‐tolerant and riparian alien species. The aquatic macrophyte approach is a useful means to detect impact of disturbances on diversity and on river quality. However, it was not effective in assessing disturbances such as flood overflow or chemical pollution. (© 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Nitrogen Addition Shapes Soil Phosphorus Availability in Two Reforested Tropical Forests in Southern China

Scant information is available on how soil phosphorus (P) availability responds to atmospheric nitrogen (N) deposition, especially in the tropical zones. This study examined the effect of N addition on soil P availability, and compared this effect between forest sites of contrasting land‐use history. Effects of N addition on soil properties, litterfall production, P release from decomposing litter, and soil P availability were studied in a disturbed (reforested pine forest with previous understory vegetation and litter harvesting) and a rehabilitated (reforested mixed pine/broadleaf forest with no understory vegetation and litter harvesting) tropical forest in southern China. Experimental N‐treatments (above ambient) were the following: Control (no N addition), N50 (50 kg N ha^?1 yr^?1), and N100 (100 kg N ha^?1 yr^?1). Results indicated that N addition significantly decreased soil P availability in the disturbed forest. In the rehabilitated forest, however, soil P availability was significantly increased by N addition. Decreases in soil P availability may be correlated with decreases in rates of P release from decomposing litter in the N‐treated plots, whereas the increase in soil P availability was correlated with an increase in litterfall production. Our results suggest that response of soil P availability to N deposition in the reforested tropical forests in southern China may vary greatly with temporal changes in tree species composition and soil nutrient status, caused by different land‐use practices.     

Controls Over Leaf Litter and Soil Nitrogen Fixation in Two Lowland Tropical Rain Forests

Global comparisons suggest that rates of N fixation in tropical rain forests may be among the highest on earth. However, data supporting this contention are rare, and the factors that regulate N fixation within the biome remain largely unknown. We conducted a full-factorial (N × P) fertilization experiment in two lowland tropical rain forests in Costa Rica to explore the effects of nutrient availability on rates of free-living N fixation in leaf litter and soil. P fertilization significantly increased N fixation rates in both leaf litter and soil, and the effect was dependent on sampling date. Fertilization with N did not affect rates of N fixation at any time. In addition, variation in N fixation rates measured in unfertilized plots at four sampling time points suggested seasonal variability in N fixation: leaf litter N fixation ranged from 0.36 kg/ha/yr in the dry season to 5.48 kg/ha/yr in the wet season. Soil N fixation showed similar patterns ranging from a dry season low of 0.26 kg/ha/yr to a wet season high of 2.71 kg/ha/yr. While the observed temporal variability suggests potential climatic control over free-living N fixation in these forests, data suggest that neither soil nor leaf litter moisture alone regulate N fixation rates. Instead, we hypothesize that a combination of ample C availability, low leaf litter N:P ratios, and high rainfall coincide during the latter portions of the rainy season and drive the highest free-living N fixation rates of the year.     

The Emerging Era of Novel Tropical Forests

In 1966 Eugene P. Odum delivered a speech before the Ecological Society of America that transformed the way ecologists looked at succession. His comparison of mature and successional systems lead ecologists to place secondary forests in an inferior position relative to mature ones to the point that today, prominent tropical biologists argue for and against the conservation value of secondary forests. Nevertheless, we live in the era of secondary forests that is rapidly giving way to a new era of novel tropical forests. Research in Puerto Rico documents the emergence of novel forests, which are different in terms of species composition, dominance, and relative importance of species from forests that were present before the island was deforested. These novel forests emerged without assistance. They are a natural response to the new environmental conditions created by human activity. Natural processes have remixed or reassembled native and introduced plant and animal species into novel communities adapted to anthropogenic environmental conditions. Novel forests are expected to protect soils, cycle nutrients, support wildlife, store carbon, maintain watershed functions, and mitigate species extinctions. The dawn of the age of tropical novel forests is upon us and must not be ignored.     

Tropical Forests of Xishuangbanna,China1

Lowland tropical forests once covered a large fraction of tropical southern China, but currently have an extent of ca 633,800 ha, mostly in Xishuangbanna of southern Yunnan. The Xishuangbanna region has a typical monsoon climate with a mean annual temperature ranging between 15.1°C and 21.7°C, and precipitation between 1200 and 2500 mm. There is a pronounced dry season between November and April with frequent occurrence of heavy fog. Rainfall during the wet season between May and October accounts for over 80 percent of total annual precipitation. Water deposition from fog accounts for over one‐third of total water input during the dry season in the forests, suggesting an important role that fog may play in pushing up the northern limit of tropical rain forest in Southeast Asia.     

Redox Fluctuations Frame Microbial Community Impacts on N-cycling Rates in a Humid Tropical Forest Soil

Fluctuating soil redox regimes may facilitate the co-occurrence of microbial nitrogen transformations with significantly different sensitivities to soil oxygen availability. In an upland humid tropical forest, we explored the impact of fluctuating redox regimes on gross nitrogen cycling rates and microbial community composition. Our results suggest that the rapidly fluctuating redox conditions that characterize these upland soils allow anoxic and oxic N processing to co-occur. Gross nitrogen mineralization was insensitive to soil redox fluctuations. In contrast, nitrifiers in this soil were directly affected by low redox periods, yet retained some activity even after 3–6 weeks of anoxia. Dissimilatory nitrate reduction to ammonium (DNRA) was less sensitive to oxygen exposure than expected, indicating that the organisms mediating this reductive process were also tolerant of unfavorable (oxic) conditions. Denitrification was a stronger sink for NO₃⁻ in consistently anoxic soils than in variable redox soils. Microbial biomass and community composition were maintained with redox fluctuation, but biomass decreased and composition changed under static oxic and anoxic soil regimes. Bacterial community structure was significantly correlated with rates of nitrification, denitrification and DNRA, suggesting that redox-control of soil microbial community structure was an important determinant of soil N-cycling rates. Specific nitrogen cycling functional groups in this environment (such as nitrifiers, DNRA organisms, and denitrifiers) appear to have adapted to nutrient resources that are spatially and temporally variable. In soils where oxygen is frequently depleted and re-supplied, characteristics of microbial tolerance and resilience can frame N cycling patterns.     

Fragmentation Impairs the Microclimate Buffering Effect of Tropical Forests

Background

Tropical forest species are among the most sensitive to changing climatic conditions, and the forest they inhabit helps to buffer their microclimate from the variable climatic conditions outside the forest. However, habitat fragmentation and edge effects exposes vegetation to outside microclimatic conditions, thereby reducing the ability of the forest to buffer climatic variation. In this paper, we ask what proportion of forest in a fragmented ecosystem is impacted by altered microclimate conditions driven by edge effects, and extrapolate these results to the whole Atlantic Forest biome, one of the most disturbed biodiversity hotspots. To address these questions, we collected above and below ground temperature for a full year using temperature sensors placed in forest fragments of different sizes, and at different distances from the forest edge.

Principal Findings

In the Atlantic forests of Brazil, we found that the buffering effect of forests reduced maximum outside temperatures by one third or more at ground level within a forest, with the buffering effect being stronger below-ground than one metre above-ground. The temperature buffering effect of forests was, however, reduced near forest edges with the edge effect extending up to 20 m inside the forest. The heavily fragmented nature of the Brazilian Atlantic forest means that 12% of the remaining biome experiences altered microclimate conditions.

Conclusions

Our results add further information about the extent of edge effects in the Atlantic Forest, and we suggest that maintaining a low perimeter-to-area ratio may be a judicious method for minimizing the amount of forest area that experiences altered microclimatic conditions in this ecosystem.     

The Impact of Hunting on the Mammalian Fauna of Tropical Asian Forests

People have hunted mammals in tropical Asian forests for at least 40,000 yr. This period has seen one confirmed global extinction (the giant pangolin, Manis palaeojavanica ) and range restrictions for several large mammals, but there is no strong evidence for unsustainable hunting pressure until the last 2000–3000 yr, when elephants, rhinoceroses, and several other species were progressively eliminated from the large parts of their ranges. Regional declines in most species have occurred largely within the last 50 yr. Recent subsistence hunting has typically focused on pigs and deer (hunted with dogs and spears or with snares), monkeys and other arboreal mammals (often caught with blowpipes), and porcupines and other rodents (smoked or dug out of burrows). Over the last 50 yr, the importance of hunting for subsistence has been increasingly outweighed by hunting for the market. The hunted biomass is dominated by the same species as before, sold mostly for local consumption, but numerous additional species are targeted for the colossal regional trade in wild animals and their parts for food, medicines, raw materials, and pets. Many populations of mammalian dispersers of large seeds and understory browsers have been depleted or eliminated, while seed predators have had a more variable fate. Most of this hunting is now illegal, but the law enforcement is generally weak. However, examples of successful enforcement show that hunting impacts can be greatly reduced where there is sufficient political will. Ending the trade in wild animals and their parts should have the highest regional conservation priority.