NITROGEN UTILIZATION AND METABOLISM RELATIVE TO PATTERNS OF N2 FIXATION IN CULTURES OF TRICHODESMIUM NIBB1067

We measured uptake kinetics for four combined N sources, ambient rates of N uptake and N₂ fixation, glutamine synthetase activity (transferase and biosynthetic), and concentrations of intracellular pools of glutamate (glu) and glutamine (gln) in cultures of Trichodesmium NIBB1067. N dynamics and metabolism were examined to assess the relative importance of N₂ fixation and N uptake to Trichodesmium nutrition. Comparisons were made between cultures grown on medium without added N, with excess NO, or with excess urea. Of the combined N sources tested, Trichodesmium NIBB1067 had the highest affinity for NH; high uptake capacities for NH, urea, and glu; and little capacity for NO uptake. In cultures grown on medium without added N, NH accumulated in the medium during growth, resulting in high NH uptake rates relative to rates of N₂ fixation. Glu uptake rates were low but consistent throughout the diel period. In cultures grown on excess NO or urea, uptake of these compounds supplied the majority of the daily N demand, although some N₂ fixation occurred during the light period. NO uptake rates were reduced when N₂-fixation rates were high. In all of the cultures, the highest gln/glu ratios and the lowest glutamine synthetase transferase/biosynthetic ratios were observed during the period when rates of total N uptake were highest. In cultures growing exponentially on medium without added N, N₂ fixation accounted for 14%– 16% of the total daily N uptake. Uptake of NH and glu, presumably regenerated within the culture vessels, represented 84%–86% of the daily N uptake. Because these systems were closed, net growth was constrained by the rate at which N₂ could be fixed into the system. However, total daily N turnover was greater than that necessary to accommodate the observed increase in culture biomass. The rapid N turnover rates observed in these cultures may support gross productivity and balance the high rates of C fixation observed in natural populations of Trichodesmium.     

AMMONIUN AND NITRATE UPTAKE BY THE MARINE MACROPHYTES HYPNEA MUSVUFORMIS (RHODOPHYTA) AND MACROCYSTIS PYRIFERA (PHAEOPHYTA)1, 2

NH₄⁺ and NO₃^? uptake were measured by continuous sampling with an autoanalyzer. For Hypnea musciformis (Wulfen) Lamouroux, NO₃^?up take followed saturable kinetics (K₂=4.9 μg-at N t^?1, V_max= 2.85 μg- at N, g(wet)^?1. h^?1. The ammonium uptake data fit a trucatd hyperbola, i.e., saturation was not reach at the concentrations used. NO₃^? uptake was reduced one-half in the presence of NH₄⁺, but presence of NO₃^? had no effect on NH₄⁺ uptake. Darkness reduced both NO₃^? and NH₄⁺ uptake by one-third to one-half. For Macrocystis pyrufera (L) C. Agardh, NO₃^? uptake followed saturable kinetices: K₂=13.1 μg-at N. l^?1. V_max=3.05 μg-at N. g(wet)^?1. h^?1.NH₄⁺ uptake showed saturable kinetics at concentration below 22 μg-at N l -1 (K₂=5.3 μg-at N.1–1, V_max= 2.38 μg-at N G (wet)^?1.h^?1: at higher concentration uptake increased lincarly with concentrations. NO₃^?and NH₄⁺ were taken up simulataneously: presence of one form did not affect uptake of the other.     

Algal biomass production,N uptake and N2 fixation in a synthetic medium

An experiment was conducted in the growth chamber to quantify the biomass production, N removal and N₂ fixation from a synthetic medium by Chlamydomonas reinhardtii and Anabaena flos-aquae. Nitrogen was supplied at a concentration of 100 mg liter⁻¹ of NO₃⁻−¹⁵N and NH₄⁺−¹⁵ (3·5 atom %), respectively. After 21 days Chlamydomonas reinhardtii removed an average of 83·8 and 78·7 mg N liter⁻¹ as NO₃⁻ and NH₄⁺, respectively. Averages of 0·89 and 0·71 g liter⁻¹ (first batch), 1·63 and 0·95 g liter⁻ (second batch) algal biomass were collected from NO₃⁻ and NH₄⁺ media, respectively. Uptake rates of 0·11 mg ¹⁵N g⁻¹ algae day⁻¹ from NO₃⁻ medium and 0·10 mg ¹⁵N g⁻¹ algae day⁻¹ from NH₄⁺ medium were calculated. Algal cells grown in NO₃⁻ and NH₄⁺ medium contained 71 and 65 g N kg⁻¹ (first batch), 39 and 58 g N kg⁻¹ (second batch), respectively. Anabaena flos-aquae produced averages of 0·58 and 0·46 g liter⁻¹ (first batch), 0·55 and 0·48 g liter⁻¹ (second batch) after 14 days of growth from NO₃⁻ and NH₄⁺ media, respectively. Blue-green algal biomass contained higher N (81–98 g kg⁻¹) than green algae. Isotope dilution method for determining N₂ fixation indicated that 55% and 77% of total N of blue-green algae grown in NO₃⁻ and NH₄⁺ media, respectively, was derived from the atmosphere.     

Changes in nitrogen cycling and retention processes in soils under spruce forests along a nitrogen enrichment gradient in Germany

A network of long-term monitoring sites on nitrogen (N) input and output of forests across Germany showed that a number of Germany's forests are subject to or are experiencing N saturation and that spruce (Picea abies) stands have high risk. Our study was aimed at (1) quantifying the changes in gross rates of microbial N cycling and retention processes in forest soils along an N enrichment gradient and (2) relating the changes in soil N dynamics to N losses. We selected spruce sites representing an N enrichment gradient (indicated by leaching : throughfall N ratios) ranging from 0.04–0.13 (low N),≤0.26 (intermediate N enrichment) to≥0.42 (highly N enriched). To our knowledge, our study is the first to report on mechanistic changes in gross rates of soil N cycling and abiotic NO₃⁻ retention under ambient N enrichment gradient. Gross N mineralization, NH₄⁺ immobilization, gross nitrification, and NO₃⁻ immobilization rates increased up to intermediate N enrichment level and somewhat decreased at highly N-enriched condition. The turnover rates of NH₄⁺ and microbial N pools increased while the turnover rates of the NO₃⁻ pool decreased across the N enrichment gradient. Abiotic immobilization of NH₄⁺ did not differ across sites and was lower than that of NO₃⁻. Abiotic NO₃⁻ immobilization decreased across the N enrichment gradient. Microbial assimilation and turnover appeared to contribute largely to the retention of NH₄⁺. The increasing NO₃⁻ deposition and decreasing turnover rates of the NO₃⁻ pool, combined with decreasing abiotic NO₃⁻ retention, possibly contributed to increasing NO₃⁻ leaching and gaseous emissions across the N enrichment gradient. The empirical relationships of changes in microbial N cycling across the N enrichment gradient may be integrated in models used to predict responses of forest ecosystems (e.g. spruce) to increasing N deposition.     

Correlation between nitrogenase and glutamine synthetase expression in the cyanobacterium Anabaena cylindrical

Distribution pattern and levels of nitrogenase (EC 1.7.99.2) and glutamine synthetase (GS, EC 6.3.1.2) were studied in N₂-, NO₃^? and NH₄⁺ grown Anabaena cylindrica (CCAP 1403/2a) using immunogold electron microscopy. In N₂- and NO₃^? grown cultures, heterocysts were formed and nitrogenase activity was present. The nitrogenase antigen appeared within the heterocysts only and showed an even distribution. The level of nitrogenase protein in the heterocysts was identical with both nitrogen sources. In NO₃^? grown cells the 30% reduction in the nitrogenase activity was due to a corresponding decrease in the heterocyst frequency and not to a repressed nitrogenase synthesis. In NH₄^? grown cells, the nitrogenase activity was almost zero and new heterocysts were formed to a very low extent. The heterocysts found showed practically no nitrogenase protein throughout the cytoplasm, although some label occurred at the periphery of the heterocyst. This demonstrates that heterocyst differentiation and nitrogenase expression are not necessarily correlated and that while NH₄⁺ caused repression of both heterocyst and nitrogenase synthesis, NO₃^? caused inhibition of heterocyst differentiation only. The glutamine synthetase protein label was found throughout the vegetative cells and the heterocysts of all three cultures. The relative level of the GS antigen varied in the heterocysts depending on the nitrogen source, whereas the GS level was similar in all vegetative cells. In N₂- and NO₃⁺ grown cells, where nitrogenase was expressed, the GS level was ca 100% higher in the heterocysts compared to vegetative cells. In NH₄⁺ grown cells, where nitrogenase was repressed, the GS level was similar in the two cell types. The enhanced level of GS expressed in heterocysts of N₂ and NO₃^? grown cultures apparently is related to nitrogenase expression and has a role in assimilation of N₂derived ammonia.     

MACROALGAL RESPONSES TO NITROGEN SOURCE AND AVAILABILITY: AMINO ACID METABOLIC PROFILING AS A BIOINDICATOR USING GRACILARIA EDULIS (RHODOPHYTA)1

The use of macroalgae as biological indicators of dissolved nutrient source and availability in the water column was investigated. Total tissue nitrogen (N) content, pigments, and amino acids of the red alga Gracilaria edulis (Gmelin) Silva were compared to N source and availability in laboratory and field incubations to identify responses that would serve as bioindicators of N. Field-collected algae were preincubated (6–8 wk) in low-nutrient seawater to deplete their luxury reserves ofN. Incubations were then conducted for periods of 3 d in laboratory aquaria (N-spiked seawater) and in the field using macroalgal incubation chambers. After incubation in different N sources (NH₄⁺, NO₃^?, and urea) in laboratory aquaria, photosynthetic pigments (phycoerythrin and chlorophyll a) and total tissue N increased, in response to increasing [NH₄⁺] but not to [NO₃^?] or [urea]. Incubation in two ranges of [NH₄⁺], one from 0 to 80 μM and the other from 0 to 800 μM, in laboratory aquaria increased the total amino acid pool. Citrulline concentrations were the most responsive to [NH₄⁺] (r²= 0. 84). NH₄⁺ source treatments produced increases in citrulline, phenylalanine, serine, and free NH₄⁺ and decreases in alanine; NO₃^? treatments produced increases in glutamic acid, citrulline, and alanine; and urea treatments produced increases in free NH₄⁺ and decreases in phenylalanine and serine. The observed variations in amino acid content facilitated the development of an index for each N source based on relative concentrations of various amino acids (i. e. metabolic profiling). Gracilaria edulis was incubated along a field N gradient in the Brisbane River (three sites) and Moreton Bay (four sites), Queensland, Australia. Both phycoerythrin and tissue N appeared to respond equally to NH₄⁺ and NO₃^? availability in the field. N source indices, based on amino acid concentration, were effective predictors of both [NH₄⁺] and [NO₃^?] over a wide range of concentrations along the field gradient. Macroalgal physiological responses, particularly amino acid content, to changes in source and availability of N appear to be useful as sensitive bioindicators of N.     

Uptake and inhibition kinetics of nitrogen in Microcystis aeruginosa: Results from cultures and field assemblages collected in the San Francisco Bay Delta,CA

The nitrogen (N) uptake kinetic parameters for Microcystis field assemblages collected from the San Francisco Bay Delta (Delta) in 2012 and non-toxic and toxic laboratory culture strains of M. aeruginosa were assessed. The ¹⁵N tracer technique was used to investigate uptake of ammonium (NH₄⁺), nitrate (NO₃⁻), urea and glutamic acid over short-term incubations (0.5–1 h), and to study inhibition of NO₃⁻, NH₄⁺ and urea uptake by NH₄⁺, NO₃⁻ and NH₄⁺, respectively. This study demonstrates that Delta Microcystis can utilize different forms of inorganic and organic N, with the greatest capacity for NH₄⁺ uptake and the least for glutamic acid uptake, although N uptake did not always follow the classic Michaelis–Menten hyperbolic relationship at substrate concentrations up to 67 μmol N L⁻¹. Current ambient N concentrations in the Delta may be at sub-saturating levels for N uptake, indicating that if N loading (especially NH₄⁺) were to increase, Delta Microcystis assemblages have the potential for increased N uptake rates. Delta Microcystis had the highest specific affinity, α, for NH₄⁺ and the lowest for NO₃⁻. In culture, N uptake by non-toxic and toxic M. aeruginosa strains was much higher than from the field, but followed similar N utilization trends to those in the field. Neither strain showed severe inhibition of NO₃⁻ uptake by NH₄⁺ or inhibition of NH₄⁺ uptake on NO₃⁻, but both strains showed some inhibition of urea uptake by NH₄⁺.     

Growth responses of the perennial legume Sesbania sesban to NH4 and NO3 nutrition and effects on root nodulation

Preference for NH₄⁺ or NO₃⁻ nutrition by the perennial legume Sesbania sesban (L.) Merr. was assessed by supplying plants with NH₄⁺ and NO₃⁻ alone or mixed at equal concentrations (0.5 mM) in hydroponic culture. In addition, growth responses of S. sesban to NH₄⁺ and NO₃⁻ nutrition and the effects on root nodulation and nutrient and mineral composition of the plant tissues were evaluated in a hydroponic setup at a range of external concentration of NH₄⁺ and NO₃⁻ (0, 0.1, 0.2, 0.5, 2 and 5 mM). Seedlings of S. sesban grew equally well when supplied with either NH₄⁺ or NO₃⁻ alone or mixed and had high relative growth rates (RGRs) ranging between 0.19 and 0.21 d⁻¹. When larger plants of S. sesban were supplied with NH₄⁺ or NO₃⁻ alone, the RGRs and shoot elongation rates were not affected by the external concentration of inorganic N. At external N concentrations up to 0.5 mM nodulation occurred and contributed to the N nutrition through fixation of gaseous N₂ from the atmosphere. For both NH₄⁺ and NO₃⁻-fed plants the N concentration in the plant tissues, particularly water-extractable NO₃⁻, increased at high supply concentrations, and concentrations of mineral cations generally decreased. It is concluded that S. sesban can grow without an external inorganic N supply by fixing atmospheric N₂ gas via root nodules. Also, S. sesban grows well on both NH₄⁺ and NO₃⁻ as the external N source and the plant can tolerate relatively high concentrations of NH₄⁺. This wide ecological amplitude concerning N nutrition makes S. sesban very useful as a N₂-fixing fallow crop in N deficient areas and also a candidate species for use in constructed wetland systems for the treatment of NH₄⁺ rich waters.     

MSX-resistant mutants of Anabaena 7120 with derepressed heterocyst development and nitrogen fixation

To investigate the role of ammonium-assimilating enzyme in heterocyst differentiation, pattern formation and nitrogen fixation, MSX-resistant and GS-impaired mutants of Anabaena 7120 were isolated using transposon (Tn5-1063) mutagenesis. Mutant Gs1 and Gs2 (impaired in GS activity) exhibited a similar rate of nitrogenase activity compared to that of the wild type under dinitrogen aerobic conditions in the presence and absence of MSX. Filaments of Gs1 and Gs2 produced heterocysts with an evenly spaced pattern in N₂-grown conditions, while addition of MSX altered the interheterocyst spacing pattern in wild type as well as in mutant strains. The wild type showed complete repression of heterocyst development and nitrogen fixation in the presence of NO₃ ^– or NH₄ ⁺, whereas the mutants Gs1 and Gs2 formed heterocysts and fixed nitrogen in the presence of NO₃ ^– and NH₄ ⁺. Addition of MSX caused complete inhibition of glutamine synthetase activity in wild type but Gs1 and Gs2 remained unaffected. These results suggest that glutamine but not ammonium is directly involved in regulation of heterocyst differentiation, interheterocyst spacing pattern and nitrogen fixation in Anabaena.     

The role of N-remobilisation and the uptake of NH4+ and NO3- by Lolium perenne L. in laminae growth following defoliation under field conditions

Several studies have previously shown that shoot removal of forage species, either by cutting or herbivore grazing, results in a large decline in N uptake (60%) and/or N₂ fixation (80%). The source of N used for initial shoot growth following defoliation relies mainly on mobilisation of N reserves from tissues remaining after defoliation. To date, most studies investigating N-mobilisation have been conducted, with isolated plants grown in controlled conditions. The objectives of this study were for Lolium perenne L., grown in a dense canopy in field conditions, to determine: 1) the contribution of N-mobilisation, NH₄ ⁺ uptake and NO₃ ^- uptake to growing shoots after defoliation, and 2) the contribution of the high (HATS) and low (LATS) affinity transport systems to the total plant uptake of NH₄ ⁺ and NO₃ ^-. During the first seven days following defoliation, decreases in biomass and N-content of roots (34% and 47%, respectively) and to a lesser extent stubble (18% and 43%, respectively) were observed, concomitant with mobilisation of N to shoots. The proportion and origin of N used by shoots (derived from reserves or uptake) was similar to data reported for isolated plants. Both HATS and LATS contributed to the total root uptake of NH₄ ⁺ and NO₃ ^-. The V_max of both the NH₄ ⁺ and NO₃ ^- HATS increased as a function of time after defoliation, and both HATS systems were saturated by substrate concentrations in the soil at all times. The capacity of the LATS was reduced as soil NO₃ ^- and NH₄ ⁺ concentrations decreased following defoliation. Data from ¹⁵N uptake by field-grown plants, and uptake rates of NH₄ ⁺ and NO₃ ^- estimated by excised root bioassays, were significantly correlated, though uptake was over-estimated by the later method. The results are discussed in terms of putative mechanisms for regulating N uptake following severe defoliation. This revised version was published online in June 2006 with corrections to the Cover Date.     

RAPID AMMONIUM‐ AND NITRATE‐INDUCED PERTURBATIONS TO CHL a FLUORESCENCE IN NITROGEN‐STRESSED DUNALIELLA TERTIOLECTA (CHLOROPHYTA)1

When NH₄ ⁺ or NO₃ ^? was supplied to NO₃ ^? ‐stressed cells of the microalga Dunaliella tertiolecta Butcher, immediate transient changes in chl a fluorescence were observed over several minutes that were not seen in N‐replete cells. These changes were predominantly due to nonphotochemical fluorescence quenching. Fluorescence changes were accompanied by changes in photosynthetic oxygen evolution, indicating interactions between photosynthesis and N assimilation. The magnitude of the fluorescence change showed a Michaelis‐Menten relationship with half‐saturation concentration of 0.5 μM for NO₃ ^? and 10 μM for NH₄ ⁺ . Changes in fluorescence responses were characterized in D. tertiolecta both over 5 days of N starvation and in cells cultured at a range of NO₃ ^? ‐limited growth rates. Variation in responses was more marked in starved than in limited cells. During N starvation, the timing and onset of the fluorescence responses were different for NO₃ ^? versus NH₄ ⁺ and were correlated with changes in maximum N uptake rate during N starvation. In severely N‐starved cells, the major fluorescence response to NO₃ ^? disappeared, whereas the response to NH₄ ⁺ persisted. N‐starved cells previously grown with NH₄ ⁺ alone showed fluorescence responses with NH₄ ⁺ but not NO₃ ^? additions. The distinct responses to NO₃ ^? and NH₄ ⁺ may be due to the differences between regulation of the uptake mechanisms for the two N sources during N starvation. This method offers potential for assessing the importance of NO₃ ^? or NH₄ ⁺ as an N source to phytoplankton populations and as a diagnostic tool for N limitation.     

The quantitative role of ammonia/ammonium transport and metabolism by plants in the global nitrogen cycle

Estimate of global yearly N assimilation by photolithotrophs are 417 Tmol N in the oceans and 167 Tmol on land and in freshwater, of which diazotrophy contributes 1 (sea) and 10 (land plus freshwater) Tmol N. More than half of the combined N assimilated (416 and 157 Tmol N year⁻¹ in the sea and on land plus freshwater, respectively) is due to reduced N, i. e. organic N and, mainly, NH₃/NH⁺₄. Assimilation of reduced N amounts to up to 334 Tmol N year⁻¹ in the oceans and at least 79 Tmol N year⁻¹ in freshwater and on land. Reassimilation of NH₃/NH⁺₄ within the plant which is related to photorespiration is at least as great as primary NH₃/NH⁺₄ assimilation in the sea, and 8 times greater on land. The less frequently considered reassimilation of NH₃/NH⁺₄ that is related to phenyl-propanoid (mainly lignin) synthesis in land plants is similar (111 Tmol N) to the primary assimilation of NH₃/NH⁺₄ on land each year. Shoots of terrestrial plants have higher NH₃ compensation partial pressures than most natural soils, and especially than have ocean-surface biota. However, gaseous transfer of NH₃/NH⁺₄ from land to the oceans is a negligible component of the global N cycle. Consideration of area-based N assimilation rates, diffusion distances and diffusion coefficients can rationalise why steady-state NH₃/NH⁺₄ concentrations in the sea are lower than in the soil solution. The possibility that photolithotrophs can catalyse the oxidation of NH₃/NH⁺₄, or organic N at the same redox level, to N₂, N₂O, NO, –NO₂, NO⁻, ₂, NO₂ or NO₄⁺, is critically assessed. The tentative conclusions are that such oxidation probably occurs, but is not a major component of the global conversion of reduced N to N₂ and more oxidized N species. More work is needed, especially to determine if NO generated from reduced N (conversion of arginine to citrulline plus NO) has a regulatory role in plants analogous to that established in metazoa. Relative to NO₃⁻ (or N₂) as N sources, growth using NH₃/NH⁺₄ as N source has a number of potential advantages in terms of cost of other resources. Mechanistically predicted economies for NH⁺₄ as N source are: (1) lower cost of photons used and, in transpiring plants, (2) less water lost per unit C assimilated, and (3) lower costs of catalytic Fe, Mn and Mo (unit C assimilated)⁻¹ s⁻¹, as well as (4) a higher maximum growth rate. The lower photon costs are frequently borne out by experimentation and the predicted higher maximum growth rates sometimes occur, while the predicted lower water costs are invariably contradicted. Few data are available for the cost of Fe, Mn or Mo as a function N source.     

Metabolic regulation and gene expression of root phosphoenolpyruvate carboxylase by different nitrogen sources

Alfalfa (Medicago sativa L.) N-sufficient plants were fed 1·5 mM N in the form of NO₃⁻, NH₄⁺ or NO₃⁻ in conjunction with NH₄⁺, or were N-deprived for 2 weeks. The specific activity of phosphoenolpyruvate carboxylase (PEPC) from the non-nodulated roots of N-sufficient plants was increased in comparison with that of N-deprived plants. The PEPC value was highest with NO₃⁻ nutrition, lowest with NH₄⁺ and intermediate in plants that were fed mixed salts. The protein was more abundant in NO₃⁻-fed plants than in either NH₄⁺- or N mixed-fed plants. Nitrogen starvation decreased the level of PEPC mRNA, and nitrate was the N form that most stimulated PEPC gene expression. The malate content was significantly lower in NO₃⁻-deprived than in NO₃⁻-sufficient plants. Root malate accumulation was high in NO₃⁻-fed plants, but decreased significantly in plants that were fed with NH₄⁺. The effect of malate on the desalted enzyme was also investigated. Root PEPC was not very sensitive to malate and PEPC activity was inhibited only by very high concentrations of malate. Asparagine and glutamine enhanced PEPC activity markedly in NO₃⁻-fed plants, but failed to affect plants that were either treated with other N types or N starved. Glutamate and citrate inhibited PEPC activity only at optimal pH. N-nutrition also influenced root nitrate and ammonium accumulation. Nitrate accumulated in the roots of NO₃⁻- and (NO₃⁻ + NH₄⁺)-fed plants, but was undetectable in those administered NH₄⁺. Both the nitrate and the ammonium contents were significantly reduced in NO₃⁻- and (NO₃⁻ + NH₄⁺)-starved plants. Root accumulation of free amino acids was strongly influenced by the type of N administered. It was highest in NH₄⁺-fed plants and the most abundant amides were asparagine and glutamine. It was concluded that root PEPC from alfalfa plants is N regulated and that nitrate exerts a strong influence on the PEPC enzyme by enhancing both PEPC gene expression and activity.     

15N MEASUREMENTS OF AMMONIUM AND NITRATE UPTAKE BY ULVA FENESTRATA (CHLOROPHYTA) AND GRACILARIA PACIFICA (RHODOPHYTA): COMPARISON OF NET NUTRIENT DISAPPEARANCE,RELEASE OF AMMONIUM AND NITRATE,AND 15N ACCUMULATION IN ALGAL TISSUE 1

Ammonium and nitrate uptake rates in the macroalgae Ulva fenestrata (Postels and Ruprecht) (Chlorophyta) and Gracilaria pacifica (Abbott) (Rhodophyta) were determined by ¹⁵N accumulation in algal tissue and by disappearance of nutrient from the medium in long‐term (4–13 days) incubations. Nitrogen‐rich algae (total nitrogen> 4% dry weight [dw]) were used to detect isotope dilution by release of inorganic unlabeled N from algal thalli. Uptake of NH₄ ⁺ was similar for the two macroalgae, and the highest rates were observed on the first day of incubation (45 μmol N·g dw ^{? 1}·h ^{? 1} in U. fenestrata and 32 μmol N·g dw ^{? 1}·h ^{? 1} in G. pacifica). A significant isotope dilution (from 10 to 7.9 atom % enrichment) occurred in U. fenestrata cultures during the first day, corresponding to a NH₄ ⁺ release rate of 11 μmol N·g dw ^{? 1}·h ^{? 1}. Little isotope dilution occurred in the other algal cultures. Concurrently to net NH₄ ⁺ uptake, we observed a transient free amino acid (FAA) release on the first day in both macroalgal cultures. The uptake rates estimated by NH₄ ⁺ disappearance and ¹⁵N incorporation in algal tissue compare well (82% agreement, defined as the percentage ratio of the lower to the higher rate) at high NH₄ ⁺ concentrations, provided that isotope dilution is taken into account. On average, 96% of added ¹⁵NH₄ ⁺ was recovered from the medium and algal tissue at the end of the incubation. Negligible uptake of NO₃ ^? was observed during the first 2–3 days in both macroalgae. The lag of uptake may have resulted from the need for either some N deprivation (use of NO₃ ^? pools) or physiological/metabolic changes required before the uptake of NO₃ ^? . During the subsequent days, NO₃ ^? uptake rates were similar for the two macroalgae but much lower than NH₄ ⁺ uptake rates (1.97–3.19 μmol N·g dw ^{? 1}·h ^{? 1}). Very little isotope dilution and FAA release were observed. The agreement between rates calculated with the two different methods averaged 91% in U. fenestrata and 95% in G. pacifica. Recovery of added ¹⁵NO₃ ^? was virtually complete (99%). These tracer incubations show that isotope dilution can be significant in NH₄ ⁺ uptake experiments conducted with N‐rich macroalgae and that determination of ¹⁵N atom % enrichment of the dissolved NH₄ ⁺ is recommended to avoid poor isotope recovery and underestimation of uptake rates.     

Terrestrial nitrogen cycle simulation with a dynamic global vegetation model

A global scale Dynamic Nitrogen scheme (DyN) has been developed and incorporated into the Lund–Posdam–Jena (LPJ) dynamic global vegetation model (DGVM). The DyN is a comprehensive process‐based model of the cycling of N through and within terrestrial ecosystems, with fully interactive coupling to vegetation and C dynamics. The model represents the uptake, allocation and turnover of N in plants, and soil N transformations including mineralization, N₂ fixation, nitrification and denitrification, NH₃ volatilization, N leaching, and N₂, N₂O and NO production and emission. Modelled global patterns of site‐scale nitrogen fluxes and reservoirs are highly correlated to observations reported from different biomes. The simulation of site‐scale net primary production and soil carbon content was improved relative to the original LPJ, which lacked an interactive N cycle, especially in the temporal and boreal regions. Annual N uptake by global natural vegetation was simulated as 1.084 Pg N yr⁻¹, with lowest values <1 g N m⁻² yr⁻¹ (polar desert) and highest values in the range 24–36.5 g N m⁻² yr⁻¹ (tropical forests). Simulated global patterns of annual N uptake are consistent with previous model results by Melillo et al. The model estimates global total nitrogen storage potentials in vegetation (5.3 Pg N), litter (4.6 Pg N) and soil (≥67 Pg as organic N and 0.94 Pg as inorganic N). Simulated global patterns of soil N storage are consistent with the analysis by Post et al. although total simulated N storage is less. Deserts were simulated to store 460 Tg N (up to 0.262 kg N m⁻²) as NO₃⁻, contributing 80% of the global total NO₃⁻ inventory of 580 Tg N. This model result is in agreement with the findings of a large NO₃⁻ pool beneath deserts. Globally, inorganic soil N is a small reservoir, comprising only 1.6% of the global soil N content to 1.5 m soil depth, but the ratio has a very high spatial variability and in hot desert regions, inorganic NO₃⁻ is estimated to be the dominant form of stored N in the soil.     

氮素类型和剂量对寒温带针叶林土壤N2O排放的影响

大气氮沉降输入会增加森林生态系统氮素有效性,进而改变土壤N_2O产生与排放,然而有关不同氮素离子(氧化态NO_3~--N与还原态NH_4~+-N)沉降对土壤N_2O排放的影响知之甚少。以大兴安岭寒温带针叶林为研究对象,构建了3种类型(NH_4Cl、KNO_3、NH_4NO_3)和4个施氮水平(0、10、20、40 kg N hm~(-2)a~(-1))的增氮控制试验,利用流动化学分析仪和静态箱-气相色谱法4次/月测定凋落物层和矿质层土壤无机氮含量、土壤-大气界面N_2O净交换通量以及相关环境因子,分析施氮类型和剂量对土壤氮素有效性、土壤N_2O通量的影响探讨氮素富集条件下土壤N_2O通量的环境驱动机制。结果表明:施氮类型和剂量均显著影响土壤无机氮含量,土壤NH_4~+-N的积累效应显著高于NO_3~--N。施氮一致增加寒温带针叶林土壤N_2O排放,NH_4NO_3促进效应最为明显,增幅为442%-677%,高于全球平均水平(134%)。土壤N_2O通量与土壤温度、凋落物层NH_4~+-N含量正相关,且随着施氮水平增加而增加。结果表明大气氮沉降短期内不会导致寒温带针叶林土壤NO_3~--N大量流失,但会显著促进土壤N_2O的排放。此外,外源性NH_4~+和NO_3~-输入对土壤N_2O排放的促进作用具有协同效应,在未来森林生态系统氮循环和氮平衡研究中应该区分对待。     

EFFECTS OF NH4+ ASSIMILATION ON DARK CARBON FIXATION AND β-1,3-GLUCAN METABOLISM IN THE MARINE DIATOM SKELETONEMA COSTATUM (BACILLARIOPHYCEAE)

The effects of NH₄⁺ assimilation on dark carbon fixation and β-1,3-glucan metabolism in the N-limited marine diatom Skeletonema costatum (Grev.) Cleve (Bacillariophyceae) were investigated by chemical analysis of cell components and incorporation of ¹⁴C-bicarbonate. The diatom was grown in pH-regulated batch cultures with a 14:10 h LD cycle until N depletion. The cells were then incubated in the dark with ¹⁴C-bicarbonate, but without a source of N for 2 h, then in the dark with 63 μmol·L⁻¹ NH₄⁺ for 3 h. Without N, the cellular concentration of free amino acids was almost constant (∼4.5 fmol·cell⁻¹). Added NH₄⁺ was assimilated at a rate of 12 fmol·cell⁻¹·h⁻¹, and the cellular amino acid pool increased rapidly (doubled in <1 h, tripled in <3 h). The glutamine level increased steeply (45× within 3 h), and the Gln/ Glu ratio increased from 0.1 to 2.4 within 3 h. The rate of dark C fixation during N depletion was only 1.0 fmol·cell⁻¹·h⁻¹. The addition of NH₄⁺ strongly stimulated dark C fixation, leading to an assimilation rate of 4.0 fmol·cell⁻¹·h⁻¹, corresponding to a molar C/N uptake ratio of 0.33. Biochemical fractionation of organic ¹⁴C showed no significant ¹⁴C fixation into amino acids during N depletion, but during the first 1–2 h of NH₄⁺ assimilation, amino acids were rapidly radiolabeled, accounting for virtually all net ¹⁴C fixation. These results indicate that anaplerotic β-carboxylation is activated during NH₄⁺ assimilation to provide C₄ intermediates for amino acid biosynthesis. The level of cellular β-1,3-d-glucan was constant (16.5 pg·cell⁻¹) during N depletion, but NH₄⁺ assimilation activated a mobilization of 28% of the reserve glucan within 3 h. The results indicate that β-1,3-glucan in diatoms is the ultimate substrate for β-carboxylation, providing precursors for amino acid biosynthesis in addition to energy from respiration.     

The effect of glutamine and asparagine on net NH4 + uptake in young wheat plants

Wheat plants grown during 10 days in the absence of N were pretreated with 1.0 eq m^-3 of methionine, asparagine or glutamine and/or 1.0 eq m^-3 MSX⁴ or 0.17 eq m^-3 DON. Net NH₄ ⁺ uptake was measured both in the presence or in the absence of the amino acid or enzyme inhibitor used in the pretreatment. The effect of met, asn and gln on net K⁺ uptake was also studied using K⁺-depleted plants. Changes in the contents of root free NH₄ ⁺, asn, gln and the activities of GS, PEP-carboxylase, NAD⁺-GDH and NADH-GDH were determined. Net NH₄ ⁺ uptake in gln and asn pretreated plants was markedly, and sometimes completely suppressed provided uptake was measured in the presence of the amides. On the other hand, the met pretreated plants absorbed only 35% less NH₄ ⁺ than the control. When NH₄ ⁺ uptake was measured in the absence of the amino acids, only those plants pretreated with asn showed a marked suppression of net uptake during the first 120 min. None of the 3 amino acids tested significantly inhibited K⁺ uptake. Free NH₄ ⁺ concentration in roots of N-starved plants increased after 4 h incubation with gln, asn or MSX in the absence of external NH₄ ⁺. Nevertheless, no correlation was observed between root NH₄ ⁺ concentration and the extent of net NH₄ ⁺ uptake suppression. The inhibitory effect exerted by asn decreased when it was supplied together with MSX or DON. Pretreatments with gln or asn in the absence of external NH₄ ⁺ significantly increased the level of asn in the roots, while that of gln remained unchanged. It is concluded that asn and gln specifically suppress net NH₄ ⁺ uptake in wheat, although it is not clear wether they act only from the root exterior, or through an endogenous pool exhibiting fast turn-over.Abbreviations AUR ammonium uptake rate - DON 6-diazo-5-oxo-L-norleucine - GDH glutamic dehydrogenase - GOGAT oxoglutarate- glutamine aminotransferase - GS glutamine synthetase - MSX L-methionine sulfoximine - PEP phosphoenolpyruvate - PVPP polyvinylpolypyrrolidone     

NUTRITIONAL STUDIES OF TWO RED ALGAE. II. KINETICS OF AMMONIUM AND NITRATE UPTAKE1, 2

Similar NH₄₊ and NO₃^?.uptake kinetic patterns were observed in Neoagardhiella baileyi (Harvey ex Kiitzing) Wyinne & Taylor and Gracilaria foliifera (Forssk?l) Borgesen. NO₃^? was taken up in a rate-sturating fashion described by the Michaelis-Menten equation. NH₄₊ uptake was multicomponent: a saturable component was accompanied by a diffusive or a high K component showing no evidence of saturation (at ≤50 μM [NH₄₊]). Nitrogen starved plantsi(C/N atom ratios > ca. 10) showed higher transient rates of NH₄₊ uptake at a given concentration than plants not N-Iimited. Only plants with high N content exhibited diel changes inNH₄₊ uptake rates, and showed transient rates of NH₄₊ accumulation which did not greatly exceed the capacity to incorporate N in steady-state growth. NH₄₊ was preferred over NO_3?even in plants preconditioned on NO_3?as the sole N. source, NO_3? uptake was suppressed at 5μM [NH₄₊], but simultaneous uptake occurred at unsurpressed rates at lower concentrations. Potential for N accumulation was greater via NH₄₊uptake than via NO_3?uptake. Changing capacity for NH₄₊ uptake with N content appears to be a mechanism whereby excessive accumulation of N was avoided by N-.satiated plants but a large accumulation was possible for N-depleted plants.