Pichia faecalis nov. comb. revisión de una cepa de levadura nombradaKloeckera faecalis Batista et Silveria, 1959

In this paper, the author re-examinesKloeckera faecalis Bat. &Sil. 1959 and transfers to genusPichia.

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Resume El autor hace una revisión de la levaduraKloeckera faecalis llevàndola al géneroPichia.

     

Filobasidium capsuligenum nov. comb.

Leucosporidium capsuligenum Fell et al. is classified in the genusFilobasidium Olive sinceTilletia-like basidia were discovered growing out from a dicaryotic mycelium with clamp connections. The speciesFilobasidium floriforme andFilobasidium capsuligenum are compared morphologically and physiologically. The author is indebted to Dr. G. Kraepelin who place the original culture, isolated from soil with dead leaves, to the disposal of the Centraalbureau voor Schimmelcultures, and to Dr. J. A. von Arx who provided him with the singlespore isolates.     

Two new species in the Pichia guilliermondii clade: Pichia caribbica sp. nov., the ascosporic state of Candida fermentati, and Candida carpophila comb. nov

Pichia caribbica sp. nov. (type strain DBVPG 4519, NRRL Y-27274, CBS 9966) is described as the ascosporic state of Candida fermentati, and Candida guilliermondii var. carpophila (type strain DBVPG 7739, NRRL Y-17905, CBS 5256) is elevated to species status as Candida carpophila comb. nov. These new taxa, which are indistinguishable on the basis of conventional taxonomic criteria, differ from one another and from Pichia guilliermondii by low DNA base sequence relatedness, different electrophoretic karyotypes, and nucleotide divergence in domains D1/D2 of 26S rDNA. Pichia caribbica produces one, rarely two, saturn-shaped ascospores in persistent asci. On the basis of molecular criteria, C. carpophila comb. nov., C. fukuyamaensis, and C. xestobii are conspecific, with the name C. carpophila having taxonomic priority.     

Erythrodecton kurzii, comb. nov.

Chiodecton kurzii is referred to the genus Erythrodecton. E. kurzii i widely distributed in Asia and Australia but only known from very few localities. It is corticolous in open, rather dry tropical rain-forests.     

Pichia sorbitophila sp nov.

A new species of the genus Pichia has been described. The species was isolated from a 70 percent solution of d-sorbitol and is distinctly osmotophilic.     

Pichia norvegensis sp. nov.

A new yeast species Pichia norvegensis Leask et Yarrow is described as the perfect state of Candida norvegensis (Dietrichson) van Uden et Farinha ex van Uden et Buckley. Strains of this species were isolated on 3 occasions from human vaginas. This species differs from other Pichia species that assimilate glucose but not galactose, sucrose, maltose, lactose, D-mannitol and D-glucitol by assimilating cellobiose.     

Phylogenetic analysis of Alysiella and related genera of Neisseriaceae: proposal of Alysiella crassa comb. nov., Conchiformibium steedae gen. nov., comb. nov., Conchiformibium kuhniae sp. nov. and Bergeriella denitrificans gen. nov., comb. nov

A phylogenetic analysis based on 16S rRNA gene sequences reveals that Alysiella filiformis belongs to the family Neisseriaceae. The genus Simonsiella is phylogenetically separated by the genera Kingella and Neisseria. The species Simonsiella crassa and A. filiformis show a close phylogenetic relationship, with the 16S rDNA sequence similarity and the DNA-DNA hybridization representing 98.7% and 35%, respectively. Therefore, S. crassa should be transferred from the genus Simonsiella to the genus Alysiella as Alysiella crassa comb. nov. Simonsiella steedae and Simonsiella sp. of cat origin show strong genetic affinities and are distantly related with the type species of Simonsiella, S. mulleri. Thus, a new genus, Conchiformibium is proposed; Conchiformibium steedae comb. nov. and Conchiformibium kuhniae sp. nov. are accommodated in this new genus. On the basis of the phylogenetic, phenotypic and chemotaxonomic distinction from the genus Neisseria, N. denitrificans should be reclassified, for which a new genus and new combination Bergeriella denitrificans are proposed.     

Culture studies of Acrochaete leptochaete comb. nov. and A. wittrockii comb. nov. (Chaetophoraceae, Chlorophyceae)

A culture study of the plants known as Phaeophila leptochaete (Huber) Nielsen and P. wittrockii (Wille) Nielsen proved that these are distinct species. Both have the Acrochaete type of hairs, and therefore, the new combinations Acrochaete leptochaete and A. wittrockii are introduced. Several isolates of both species were started from plants collected at different places in Europe.
A. leptochaete in culture was mainly characterised by having two or more (up to six) pyrenoids in many of its cells, while in A. wittrockii there invariably was only one. The swarmers formed by A. leptochaete had two or four flagella. Several hairs from one basal swelling were sometimes observed in one of the isolates. Another isolate often formed a hair on the germinated zoospore. The isolates of A. wittrockii had a variable morphology, from unicellular plants to large pseudoparenchymatous cell masses. Different kinds of swarmers were observed; zoospores with three flagella seemed typical, but ones with two or four flagella were also observed. Small, pale biflagellate swarmers were assumed to be gametes. One of the isolates of A. wittrockii differed from the rest as the only swarmer type observed was zoospores with two flagella. Chlorophilum ephemerum is considered identical to A. wittrockii. Observations on hair formation in A. repens suggested that the hair structure represents a separate cell.     

Parmeliopsis esorediata comb.nov. in South Norway

The lichen Parmeliopsis esorediata (Degel.) Nordnes comb. nov. has been rediscovered. It is now known from the subalpine region of three counties in South Norway.     

potamolejeunea Holtii (Spruce) nov.comb.

Abstract

Bryophytes usually have anti-feeding properties to defend against microbial and herbivore attack; however, the consumption of Haplocladium microphyllum (Hedw.) Broth. capsules by Agrotis sp. larvae is rather common in Shanghai in the spring. To test whether H. microphyllum is the only moss eaten, and why the gametophytes of H. microphyllum are not eaten, a series of quantitative experiments were carried out to understand the feeding habits of Agrotis larvae on the given moss materials at three growth stages of larval life. The results show that the larvae can feed on the capsules of six moss species to different degrees: Funaria hygrometrica Hedw., H. microphyllum, Physcomitrium sphaericum (C.F.Ludw. ex Schkuhr) Brid., Trematodon longicollis Michx., Ditrichum pallidum (Hedw.) Hampe, and Pogonatum inflexum (Lindb.) Sande Lac. The capsules of the first four species were grazed heavily by the larvae, compared with limited consumption of the latter two (D. pallidum and P. inflexum), which even induced a high mortality rate among the larvae. With the growth of the larval instar, the daily demand for moss capsules by the larvae increases gradually. The lipid content of the capsules may play an important role when the larva selects its feeding target.     

The basidiomycetous yeast Rhodotorula yarrowii comb. nov

Sequence analysis of the D1/D2 domains of the large subunit rDNA of Cryptococcus yarrowii (CBS 7417) indicates that this species does not belong to the hymenomycetous fungi, but instead is of urediniomycetous affinity. Therefore, the name change Rhodotorula yarrowii comb. nov. is proposed. The cell wall of the species contains xylose, a character considered by most authors to indicate fungi of hymenomycetous affinity. However, our results show that xylose may occur in minor amounts in the cell walls of urediniomycetous fungi. A high mannose content of the cell walls may be a more reliable character for urediniomycetous yeasts.     

Description of Pseudoclavibacter triregionum sp. nov. from human blood and Pseudoclavibacter albus comb. nov., and revised classification of the genus Pseudoclavibacter: proposal of Caespitibacter gen. nov., with Caespitibacter soli comb. nov. and Caespitibacter caeni comb. nov

We present polyphasic taxonomic data to demonstrate that strain 125703-2019^T, a human blood isolate, represents a novel species within the genus Pseudoclavibacter, and to reclassify the illegitimate Zimmermannella alba Lin et al., 2004 as Pseudoclavibacter albus comb. nov. Upon primary isolation, strain 125703-2019^T could not be identified reliably using MALDI-TOF mass spectrometry during routine diagnostic work, but partial 16S rRNA gene sequence analysis revealed that it belonged to the genus Pseudoclavibacter. Average nucleotide identity and digital DNA-DNA hybridisation analyses confirmed that it represented a novel species within this genus. A detailed physiological characterisation yielded differential tests between the novel species and its nearest neighbor taxa, which could also be differentiated using MALDI-TOF mass spectrometry. We propose to formally classify this strain into the novel species Pseudoclavibacter triregionum sp. nov., with strain 125703-2019^T (=?R-76471^T, LMG 31777^T, CCUG 74796^T) as the type strain. The whole-genome assembly of strain 125703-2019^T has a size of 2.4 Mb and a G?+?C content of 72.74%. A Pseudoclavibacter pangenome analysis revealed that 667 gene clusters were exclusively present in strain 125703-2019^T. While these gene clusters were enriched in several COG functional categories, this analysis did not reveal functions that explained the occurrence of this species in human infection. Finally, several phylogenetic and phylogenomic analyses demonstrated that the genus Pseudoclavibacter is polyphyletic with Pseudoclavibacter soli and Pseudoclavibacter caeni representing a unique and deeply branching line of descent within the family Microbacteriaceae. We therefore also propose to reclassify both species into the novel genus Caespitibacter gen. nov. as Caespitibacter soli comb. nov. and Caespitibacter caeni comb. nov., respectively, and with C. soli comb. nov. as the type species.

     

Proposal to change the genus designation Serpula to Serpulina gen. nov. containing the species Serpulina hyodysenteriae comb. nov. and Serpulina innocens comb. nov.

The bacterial genus Serpula Stanton et al. 1991 is illegitimate due to the existence of a fungal genus Serpula Pers. ex S. F. Gray. Consequently, a new genus designation, Serpulina, is proposed for this spirochete genus. Serpula hyodysenteriae, the type species, and Serpula innocens Stanton et al. 1991, therefore, become Serpulina hyodysenteriae comb. nov. and Serpulina innocens comb. nov.     

Heterogeneity of the yeasts Zygowilliopsis californica: Z. californica var. dimennae comb. nov., stat. nov. and Z. californica var. fukushimae comb. nov., stat. nov

A significant heterogeneity of the species Zygowilliopsis californica was revealed using RFLP-analysis of the PCR-amplified rDNA fragment spanning the 5.8S rRNA gene and the internal transcribed spacers ITS1 and ITS2. Phylogenetic analysis of the nucleotide sequences of ITS1 and ITS2 rDNA differentiated three varieties: Z. californica var. californica, Z. californica var. dimennae, and Z. californica var. fukushimae. The most variable was the ITS 2 region, where 7-26 nucleotide substitutions were revealed. The varieties formed semisterile hybrids with meiotic segregation of control markers. The limits of the phylogenetic species concept are discussed.     

Description ofOceanospirillum kriegii sp. nov. andO. jannaschii sp. nov. and assignment of two species ofAlteromonas to this genus asO. commune comb. nov. andO. vagum comb. nov

Immunological studies of Fe-containing superoxide dismutase (FeSOD) and glutamine synthetase (GS) have established a close relationship betweenOceanospirillum linum (the type species of the genus),O. beijerinckii, Alteromonas communis, A. vaga, and two unnamed species of marine bacteria (groups H-1 and I-1). The four latter species have, consequently, been assigned to the genusOceanospirillum asO. commune comb. nov.,O. vagum comb. nov.,O. kriegii sp. nov. (group H-1; type strain 197, ATCC 27133), andO. jannaschii sp. nov. (group I-1; type strain 207, ATCC 27135). The phenotypic properties of these species are presented together with their distinguishing traits.