The use of eddy covariance to infer the net carbon dioxide uptake of Brazilian rain forest

• 1 Eddy covariance measurements of CO₂ flux, based on four and six week campaigns in Rondôdnia, Brazil, have been used in conjunction with a model to scale up data to a whole year, and thus estimate the carbon balance of the tropical forest ecosystem, and the changes in carbon balance expected from small interannual variations in climatological conditions.
• 2 One possible source of error in this estimation arises from the difficulty in measuring fluxes under stably stratified meteorological conditions, such as occur frequently at night. Flux may be ‘lost’ because of low velocity advection, caused by nocturnal radiative cooling at sites on raised ground. Such effects may be detected by plotting the net ecosystem flux of CO₂, F_eco is a function of wind speed. If flux is ‘lost’ then F_eco is expected to decline with wind speed. In the present data set, this did not occur, and F_eco was similar to the nocturnal flux estimated independently from chamber measurements.
• 3 The model suggests that in 1992/3, the Gross Primary Productivity (GPP) was 203.3 mol C m^?2 y^?1 and ecosystem respiration was 194.8 mol C m^?2 y^?1, giving an ecosystem carbon balance of 8.5 mol C m^?2 y^?1, equivalent to a sink of 1.0 ton C ha^?1 y^?1. However, the sign and magnitude of this figure is very sensitive to temperature, because of the strong influence of temperature on respiration.
• 4 The model also suggests that the effect of temperature on the net carbon balance is strongly dependent on the partial pressure of CO₂.

     

Production of CO2 in Soil Profiles of a California Annual Grassland

Soils play a key role in the global cycling of carbon (C), storing organic C, and releasing CO₂ to the atmosphere. Although a large number of studies have focused on the CO₂ flux at the soil–air interface, relatively few studies have examined the rates of CO₂ production in individual layers of a soil profile. Deeper soil horizons often have high concentrations of CO₂ in the soil air, but the sources of this CO₂ and the spatiotemporal dynamics of CO₂ production throughout the soil profile are poorly understood. We studied CO₂ dynamics in six soil profiles arrayed across a grassland hillslope in coastal southern California. Gas probes were installed in each profile and gas samples were collected weekly or biweekly over a three-year period. Using soil air CO₂ concentration data and a model based on Fick’s law of diffusion, we modeled the rates of CO₂ production with soil profile depth. The CO₂ diffusion constants were checked for accuracy using measured soil air ²²²Rn activities. The modeled net CO₂ production rates were compared with CO₂ fluxes measured at the soil surface. In general, the modeled and measured net CO₂ fluxes were very similar although the model consistently underestimated CO₂ production rates in the surficial soil horizons when the soils were moist. Profile CO₂ production rates were strongly affected by the inter- and intra-annual variability in rainfall; rates were generally 2–10 times higher in the wet season (December to May) than in the dry season (June to November). The El Niño event of 1997–1998, which brought above-average levels of rainfall to the study site, significantly increased CO₂ production in both the surface and subsurface soil horizons. Whole profile CO₂ production rates were approximately three times higher during the El Niño year than in the following years of near-average rainfall. During the dry season, when the net rates of CO₂ flux from the soil profiles are relatively low (4–11 mg C– CO₂ m⁻² h⁻¹), 20%–50% of the CO₂ diffusing out of the profiles appears to originate in the relatively moist soil subsurface (defined here as those horizons below 40 cm in depth). The natural abundance ¹⁴C signatures of the CO₂ and soil organic C suggest that the subsurface CO₂ is derived from the microbial mineralization of recent organic C, possibly dissolved organic C transported to the subsurface horizons during the wet season.     

Carbon dioxide and methane exchange of a north-east Siberian tussock tundra

Carbon dioxide, energy flux measurements and methane chamber measurements were carried out in an arctic wet tussock grassland located on a flood plane of the Kolyma river in NE Siberia over a summer period of 155 days in 2002 and early 2003. Respiration was also measured in April 2004. The study region is characterized by late thaw of the top soil (mid of June) and periodic spring floods. A stagnant water table below the grass canopy is fed by thawing of the active layer of permafrost and by flood water. The climate is continental with average daily temperature in the warmest months of 13°C (maximum temperature at midday: 28°C by the end of July), dry air (maximum vapour pressure deficit at midday: 28 hPa) and low rainfall of 50 mm during summer (July–September). Summer evaporation (July–September: 103 mm) exceeded rainfall by a factor of 2. The daily average Bowen ratio (H/LE) was 0.62 during the growing season. Net ecosystem CO₂ uptake reached 10 μmol m⁻² s⁻¹ and was related to photon flux density (PFD) and vapour pressure deficit (VPD). The cumulative annual net carbon flux from the atmosphere to the terrestrial surface was estimated to be about −38 g C m⁻² yr⁻¹ (negative flux depicts net carbon sink). Winter respiration was extrapolated using the Lloyd and Taylor function. The net carbon balance is composed of a high rate of assimilation in a short summer and a fairly large but uncertain respiration mainly during autumn and spring. Methane flux (about 12 g C m⁻² measured over 60 days) was 25% of C uptake during the same period of time (end of July to end of September). Assuming that CH₄ was emitted only in summer, and taking the greenhouse gas warming potential of CH₄ vs. CO₂ into account (factor 23), the study site was a greenhouse gas source (at least 200 g C_equivalent m⁻² yr⁻¹). Comparing different studies in wetlands and tundra ecosystems as related to latitude, we expect that global warming would rather increase than decrease the CO₂-C sink.     

Elevated CO<Subscript>2</Subscript> and nitrogen addition accelerate net carbon gain in a brackish marsh

Wetlands have an inordinate influence on the global greenhouse gas budget, but how global changes may alter wetland contribution to future greenhouse gas fluxes is poorly understood. We determined the greenhouse gas balance of a tidal marsh exposed to nine years of experimental carbon dioxide (CO₂) and nitrogen (N) manipulation. We estimated net carbon (C) gain rates by measuring changes in plant and soil C pools over nine years. In wetland soils that accrete primarily through organic matter inputs, long-term measurements of soil elevation, along with soil C density, provide a robust estimate of net soil C gain. We used net soil C gain along with methane and nitrous oxide fluxes to determine the radiative forcing of the marsh under elevated CO₂ and N addition. Nearly all plots exhibited a net gain of C over the study period (up to 203 g C m^?2 year^?1), and C gain rates were greater with N and CO₂ addition. Treatment effects on C gain and methane emissions dominated trends in radiative forcing while nitrous oxide fluxes in all treatments were negligible. Though these soils experience salinities that typically suppress methane emissions, our results suggest that elevated CO₂ can stimulate methane emissions, overcoming positive effects of elevated CO₂ on C gain, converting brackish marshes that are typically net greenhouse gas sinks into sources. Adding resources, either CO₂ or N, will likely increase “blue carbon” accumulation rates in tidal marshes, but importantly, each resource can have distinct influences on the direction of total greenhouse forcing.     

Evaporation and carbonic anhydrase activity recorded in oxygen isotope signatures of net CO2 fluxes from a Mediterranean soil

The oxygen stable isotope composition (δ¹⁸O) of CO₂ is a valuable tool for studying the gas exchange between terrestrial ecosystems and the atmosphere. In the soil, it records the isotopic signal of water pools subjected to precipitation and evaporation events. The δ¹⁸O of the surface soil net CO₂ flux is dominated by the physical processes of diffusion of CO₂ into and out of the soil and the chemical reactions during CO₂–H₂O equilibration. Catalytic reactions by the enzyme carbonic anhydrase, reducing CO₂ hydration times, have been proposed recently to explain field observations of the δ¹⁸O signatures of net soil CO₂ fluxes. How important these catalytic reactions are for accurately predicting large‐scale biosphere fluxes and partitioning net ecosystem fluxes is currently uncertain because of the lack of field data. In this study, we determined the δ¹⁸O signatures of net soil CO₂ fluxes from soil chamber measurements in a Mediterranean forest. Over the 3 days of measurements, the observed δ¹⁸O signatures of net soil CO₂ fluxes became progressively enriched with a well‐characterized diurnal cycle. Model simulations indicated that the δ¹⁸O signatures recorded the interplay of two effects: (1) progressive enrichment of water in the upper soil by evaporation, and (2) catalytic acceleration of the isotopic exchange between CO₂ and soil water, amplifying the contributions of ‘atmospheric invasion’ to net signatures. We conclude that there is a need for better understanding of the role of enzymatic reactions, and hence soil biology, in determining the contributions of soil fluxes to oxygen isotope signals in atmospheric CO₂.     

The positive net radiative greenhouse gas forcing of increasing methane emissions from a thawing boreal forest‐wetland landscape

At the southern margin of permafrost in North America, climate change causes widespread permafrost thaw. In boreal lowlands, thawing forested permafrost peat plateaus (‘forest’) lead to expansion of permafrost‐free wetlands (‘wetland’). Expanding wetland area with saturated and warmer organic soils is expected to increase landscape methane (CH₄) emissions. Here, we quantify the thaw‐induced increase in CH₄ emissions for a boreal forest‐wetland landscape in the southern Taiga Plains, Canada, and evaluate its impact on net radiative forcing relative to potential long‐term net carbon dioxide (CO₂) exchange. Using nested wetland and landscape eddy covariance net CH₄ flux measurements in combination with flux footprint modeling, we find that landscape CH₄ emissions increase with increasing wetland‐to‐forest ratio. Landscape CH₄ emissions are most sensitive to this ratio during peak emission periods, when wetland soils are up to 10 °C warmer than forest soils. The cumulative growing season (May–October) wetland CH₄ emission of ~13 g CH₄ m^?2 is the dominating contribution to the landscape CH₄ emission of ~7 g CH₄ m^?2. In contrast, forest contributions to landscape CH₄ emissions appear to be negligible. The rapid wetland expansion of 0.26 ± 0.05% yr^?1 in this region causes an estimated growing season increase of 0.034 ± 0.007 g CH₄ m^?2 yr^?1 in landscape CH₄ emissions. A long‐term net CO₂ uptake of >200 g CO₂ m^?2 yr^?1 is required to offset the positive radiative forcing of increasing CH₄ emissions until the end of the 21st century as indicated by an atmospheric CH₄ and CO₂ concentration model. However, long‐term apparent carbon accumulation rates in similar boreal forest‐wetland landscapes and eddy covariance landscape net CO₂ flux measurements suggest a long‐term net CO₂ uptake between 49 and 157 g CO₂ m^?2 yr^?1. Thus, thaw‐induced CH₄ emission increases likely exert a positive net radiative greenhouse gas forcing through the 21st century.     

Calcium content of liming material and its effect on sulphur release in a coniferous forest soil

Soil columns with O + A (Experiment I) or Ohorizons (Experiment II) from a Haplic Podsol wereincubated at 15 °C for 368 and 29 + 106 days,respectively. Three types of liming material differingin Ca²⁺ content, i.e. calcium carbonate(CaCO₃), dolomite (CaMg(CO₃)₂) andmagnesium carbonate (MgCO₃), were mixed into theO horizons in equimolar amounts corresponding to 6000kg of CaCO₃ per ha. In the limed treatments ofExperiment I, the leaching of dissolved organic carbon(DOC) and the net sulphur mineralization (estimated asaccumulated SO ₄ ^2– leaching corrected forchanges in the soil pools of adsorbed and waterextractable SO ₄ ^2– ) increased with decreasingCa²⁺ content of the lime and increasing degree oflime dissolution. In relation to the controltreatment, only the MgCO₃ treatment resulted ina significantly higher net sulphur mineralization. InExperiment I the net sulphur mineralization was 4.06,1.68, 0.57, and 2.14 mg S in the MgCO₃,CaMg(CO₃)₂, CaCO₃ and control treatment,respectively. The accumulated SO ₄ ^2– leachingin Experiment II during the first 29 days was 1.70,0.74 and 0.48 mg S in the MgCO₃,CaMg(CO₃)₂ and control treatment,respectively. In the two experiments there wereconsistently significant positive correlations betweenleached amounts of SO ₄ ^2– and DOC. It wasconcluded that net sulphur mineralization was stronglyconnected to the solubilization of the organic matter(DOC formation) and that pH and/or Ca²⁺ ionsaffected the net sulphur mineralization through theireffects on organic matter solubility.     

The relative contributions of biological and abiotic processes to carbon dynamics in subarctic sea ice

Knowledge on the relative effects of biological activity and precipitation/dissolution of calcium carbonate (CaCO₃) in influencing the air-ice CO₂ exchange in sea-ice-covered season is currently lacking. Furthermore, the spatial and temporal occurrence of CaCO₃ and other biogeochemical parameters in sea ice are still not well described. Here we investigated autotrophic and heterotrophic activity as well as the precipitation/dissolution of CaCO₃ in subarctic sea ice in South West Greenland. Integrated over the entire ice season (71 days), the sea ice was net autotrophic with a net carbon fixation of 56 mg C m^?2, derived from a sea-ice-related gross primary production of 153 mg C m^?2 and a bacterial carbon demand of 97 mg C m^?2. Primary production contributed only marginally to the TCO₂ depletion of the sea ice (7–25 %), which was mainly controlled by physical export by brine drainage and CaCO₃ precipitation. The net biological production could only explain 4 % of this sea-ice-driven CO₂ uptake. Abiotic processes contributed to an air-sea CO₂ uptake of 1.5 mmol m^?2 sea ice day^?1, and dissolution of CaCO₃ increased the air-sea CO₂ uptake by 36 % compared to a theoretical estimate of melting CaCO₃-free sea ice. There was a considerable spatial and temporal variability of CaCO₃ and the other biogeochemical parameters measured (dissolved organic and inorganic nutrients).     

Contribution of Sediment Respiration to Summer CO2 Emission from Low Productive Boreal and Subarctic Lakes

We measured sediment production of carbon dioxide (CO₂) and methane (CH₄) and the net flux of CO₂ across the surfaces of 15 boreal and subarctic lakes of different humic contents. Sediment respiration measurements were made in situ under ambient light conditions. The flux of CO₂ between sediment and water varied between an uptake of 53 and an efflux of 182 mg C m⁻² day⁻¹ from the sediments. The mean respiration rate for sediments in contact with the upper mixed layer (SedR) was positively correlated to dissolved organic carbon (DOC) concentration in the water (r² = 0.61). The net flux of CO₂ across the lake surface [net ecosystem exchange (NEE)] was also closely correlated to DOC concentration in the upper mixed layer (r² = 0.73). The respiration in the water column was generally 10-fold higher per unit lake area compared to sediment respiration. Lakes with DOC concentrations <5.6 mg L⁻¹ had net consumption of CO₂ in the sediments, which we ascribe to benthic primary production. Only lakes with very low DOC concentrations were net autotrophic (<2.6 mg L⁻¹) due to the dominance of dissolved allochthonous organic carbon in the water as an energy source for aquatic organisms. In addition to previous findings of allochthonous organic matter as an important driver of heterotrophic metabolism in the water column of lakes, this study suggests that sediment metabolism is also highly dependent on allochthonous carbon sources.     

Role of the aquatic pathway in the carbon and greenhouse gas budgets of a peatland catchment

Peatland streams have repeatedly been shown to be highly supersaturated in both CO₂ and CH₄ with respect to the atmosphere, and in combination with dissolved (DOC) and particulate organic carbon (POC) represent a potentially important pathway for catchment greenhouse gas (GHG) and carbon (C) losses. The aim of this study was to create a complete C and GHG (CO₂, CH₄, N₂O) budget for Auchencorth Moss, an ombrotrophic peatland in southern Scotland, by combining flux tower, static chamber and aquatic flux measurements from 2 consecutive years. The sink/source strength of the catchment in terms of both C and GHGs was compared to assess the relative importance of the aquatic pathway. During the study period (2007–2008) the catchment functioned as a net sink for GHGs (352 g CO₂‐Eq m^?2 yr^?1) and C (69.5 g C m^?2 yr^?1). The greatest flux in both the GHG and C budget was net ecosystem exchange (NEE). Terrestrial emissions of CH₄ and N₂O combined returned only 4% of CO₂ equivalents captured by NEE to the atmosphere, whereas evasion of GHGs from the stream surface returned 12%. DOC represented a loss of 24% of NEE C uptake, which if processed and evaded downstream, outside of the catchment, may lead to a significant underestimation of the actual catchment‐derived GHG losses. The budgets clearly show the importance of aquatic fluxes at Auchencorth Moss and highlight the need to consider both the C and GHG budgets simultaneously.     

Fluxes of methane and carbon dioxide from a small productive lake to the atmosphere

The fluxes of CH₄ and CO₂ to the atmosphere, and the relative contributions of ebullition and molecular diffusion, were determined for a small hypertrophic freshwater lake (Priest Pot, UK) over the period May to October 1997. The average total flux of CH₄ and CO₂ (estimated from 7 sites on the lake) was approximately 52 mmol m^–2 d^–1 and was apportioned 12 and 40 mmol m^–2 d^–1 toCH₄ and CO₂ respectively. Diffusion across the air-water interface accounted for the loss of 0.4and 40 mmol m^–2 d^–1 of CH₄ and CO₂ respectively whilst the corresponding figures for ebullition losses were 12.0 (CH₄) and 0.23 (CO₂) mmol m^–2 d^–1. Most CH₄ (96%) was lost by ebullition, and most CO₂ (99%) by diffusive processes. The ebullition of gas, measured at weekly intervals along a transect of the lake, showed high spatial and temporal variation. The CH₄ content of the trapped gas varied between 44 and 88% (by volume) and was highest at the deepest points. Pulses of gas ebullition were detected during periods of rapidly falling barometric pressure. Therelevance of the measurements to global estimates ofcarbon emission from freshwaters are discussed.     

Multi‐year carbon budget of a mature commercial short rotation coppice willow plantation

Energy derived from second generation perennial energy crops is projected to play an increasingly important role in the decarbonization of the energy sector. Such energy crops are expected to deliver net greenhouse gas emissions reductions through fossil fuel displacement and have potential for increasing soil carbon (C) storage. Despite this, few empirical studies have quantified the ecosystem‐level C balance of energy crops and the evidence base to inform energy policy remains limited. Here, the temporal dynamics and magnitude of net ecosystem carbon dioxide (CO₂) exchange (NEE) were quantified at a mature short rotation coppice (SRC) willow plantation in Lincolnshire, United Kingdom, under commercial growing conditions. Eddy covariance flux observations of NEE were performed over a four‐year production cycle and combined with biomass yield data to estimate the net ecosystem carbon balance (NECB) of the SRC. The magnitude of annual NEE ranged from ?147 ± 70 to ?502 ± 84 g CO₂‐C m^?2 year^?1 with the magnitude of annual CO₂ capture increasing over the production cycle. Defoliation during an unexpected outbreak of willow leaf beetle impacted gross ecosystem production, ecosystem respiration, and net ecosystem exchange during the second growth season. The NECB was ?87 ± 303 g CO₂‐C m^?2 for the complete production cycle after accounting for C export at harvest (1,183 g C m^?2), and was approximately CO₂‐C neutral (?21 g CO₂‐C m^?2 year^?1) when annualized. The results of this study are consistent with studies of soil organic C which have shown limited changes following conversion to SRC willow. In the context of global decarbonization, the study indicates that the primary benefit of SRC willow production at the site is through displacement of fossil fuel emissions.     

Seasonal variations of CO2 and water vapour exchange rates over a temperate deciduous forest

Long-term and direct measurements of CO₂ and water vapour exchange are needed over forested ecosystems to determine their net annual fluxes of carbon dioxide and water. Such measurements are also needed to parameterize and test biogeochemical, ecological and hydrological assessment models. Responding to this need, eddy covariance measurements of CO₂ and water vapour were made ever a deciduous forest growing near Oak Ridge, TN, between April 1993 and April 1994. Periodic measurements were made of leaf area index, stomatal resistance, soil moisture and pre-dawn leaf water potential to characterize the gas exchange capacity of the canopy. Four factors had a disproportionate influence on the seasonal variation of CO₂ flux densities. These factors were photon flux densities (during the growing season), temperature (during the dormant season), leaf area index and the occurrence of drought The drought period occurred during the peak of the growing season and caused a significant decline in daily and hourly CO₂ flux densities, relative to observations over the stand when soil moisture was plentiful. The annual net uptake of carbon was calculated by integrating flux measurements and filling missing and spurious data with the relations obtained between measured CO₂ fluxes and environmental forcing variables. The net flux of carbon for the period between April 1993 and April 1994 was -525 g C m^?2 y^?1. This value represents a net flux of carbon from the atmosphere and into the forest. The net annual carbon exchange of this southern temperate broadleaved forest exceeded values measured over a northern temperate forest (which experiences a shorter growing season and has less leaf area) by 200 g C m^?2 y^?1 (cf. Wofsy et al 1993). The seasonal variation of canopy evaporation (latent heat flux) was controlled mostly by changes in leaf area and net radiation. A strong depression in evaporation rates was not observed during the drought Over a broadleaved forest large vapour pressure deficits promote evaporation and trees in a mixed stand are able to tap a variety of deep and shallow water sources.     

Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: past, present and future

The eddy covariance technique ascertains the exchange rate of CO₂ across the interface between the atmosphere and a plant canopy by measuring the covariance between fluctuations in vertical wind velocity and CO₂ mixing ratio. Two decades ago, the method was employed to study CO₂ exchange of agricultural crops under ideal conditions during short field campaigns. During the past decade the eddy covariance method has emerged as an important tool for evaluating fluxes of carbon dioxide between terrestrial ecosystems and the atmosphere over the course of a year, and more. At present, the method is being applied in a nearly continuous mode to study carbon dioxide and water vapor exchange at over a hundred and eighty field sites, worldwide. The objective of this review is to assess the eddy covariance method as it is being applied by the global change community on increasingly longer time scales and over less than ideal surfaces. The eddy covariance method is most accurate when the atmospheric conditions (wind, temperature, humidity, CO₂) are steady, the underlying vegetation is homogeneous and it is situated on flat terrain for an extended distance upwind. When the eddy covariance method is applied over natural and complex landscapes or during atmospheric conditions that vary with time, the quantification of CO₂ exchange between the biosphere and atmosphere must include measurements of atmospheric storage, flux divergence and advection. Averaging CO₂ flux measurements over long periods (days to year) reduces random sampling error to relatively small values. Unfortunately, data gaps are inevitable when constructing long data records. Data gaps are generally filled with values produced from statistical and empirical models to produce daily and annual sums of CO₂ exchange. Filling data gaps with empirical estimates do not introduce significant bias errors because the empirical algorithms are derived from large statistical populations. On the other hand, flux measurement errors can be biased at night when winds are light and intermittent. Nighttime bias errors tend to produce an underestimate in the measurement of ecosystem respiration. Despite the sources of errors associated with long‐term eddy flux measurements, many investigators are producing defensible estimates of annual carbon exchange. When measurements come from nearly ideal sites the error bound on the net annual exchange of CO₂ is less than ±50 g C m^?2 yr^?1. Additional confidence in long‐term measurements is growing because investigators are producing values of net ecosystem productivity that are converging with independent values produced by measuring changes in biomass and soil carbon, as long as the biomass inventory studies are conducted over multiple years.     

Soil organic carbon dust emission: an omitted global source of atmospheric CO2

Soil erosion redistributes soil organic carbon (SOC) within terrestrial ecosystems, to the atmosphere and oceans. Dust export is an essential component of the carbon (C) and carbon dioxide (CO₂) budget because wind erosion contributes to the C cycle by removing selectively SOC from vast areas and transporting C dust quickly offshore; augmenting the net loss of C from terrestrial systems. However, the contribution of wind erosion to rates of C release and sequestration is poorly understood. Here, we describe how SOC dust emission is omitted from national C accounting, is an underestimated source of CO₂ and may accelerate SOC decomposition. Similarly, long dust residence times in the unshielded atmospheric environment may considerably increase CO₂ emission. We developed a first approximation to SOC enrichment for a well‐established dust emission model and quantified SOC dust emission for Australia (5.83 Tg CO₂‐e yr^?1) and Australian agricultural soils (0.4 Tg CO₂‐e yr^?1). These amount to underestimates for CO₂ emissions of ≈10% from combined C pools in Australia (year = 2000), ≈5% from Australian Rangelands and ≈3% of Australian Agricultural Soils by Kyoto Accounting. Northern hemisphere countries with greater dust emission than Australia are also likely to have much larger SOC dust emission. Therefore, omission of SOC dust emission likely represents a considerable underestimate from those nations’ C accounts. We suggest that the omission of SOC dust emission from C cycling and C accounting is a significant global source of uncertainty. Tracing the fate of wind‐eroded SOC in the dust cycle is therefore essential to quantify the release of CO₂ from SOC dust to the atmosphere and the contribution of SOC deposition to downwind C sinks.     

Gas exchange in San Francisco Bay

Gas exchange across the air-water interface is one of the most important processes controlling the concentrations of dissolved gases in estuarine systems. A brief review of principles and equations to predict gas exchange indicates that both current shear and wind shear are possible sources of turbulence for controlling gas exchange rates in estuaries. Rates of exchange determined by constructing a mass balance for radon-222 indicate that wind shear is dominant in San Francisco Bay. Because many estuaries have wind shear and current speeds comparable to this system, this conclusion may be true for other systems as well. A compilation of gas exchange rates measured in San Francisco Bay with those for other wind-dominated systems updates previous compilations and yields an equation for predicting gas exchange: K _l = 34.6 R _v (D_m20)^1/2 (U₁₀)^1.5 where R is the ratio of the kinematic viscosity of pure water at 20° C to the kinematic viscosity of water at the measured temperature and salinity, D_m20 is the molecular diffusivity of the gas of interest at 20°C in cm² s^–1, U₁₀ is the wind speed at 10 meters above the surface in m s^–1, and K_L is the liquid phase gas transfer coefficient in m d^–1. This relationship fits the available field data within 20% for wind speeds between 3 and 12 m s^–1. It is used to show that the residence time of dissolved oxygen in San Francisco Bay should range from 2 days during windy summer periods to as much as 15 days during calm winter periods. Because these times are short compared to time constants for other processes controlling oxygen distribution in this system, dissolved oxygen concentrations in San Francisco Bay are usually near atmospheric equilibrium. Other systems, such as Chesapeake Bay, may differ. There, despite ample air-water gas exchange rates, some bottom waters become anoxic during summer months due to slow vertical mixing.     

CO2 exchange in an organic field growing barley or grass in eastern Finland

The CO₂ dynamics were measured in an organic soil in eastern Finland during the growing season and wintertime, and the annual CO₂ balance was calculated for plots where barley or grass was grown. During the summer, the CO₂ dynamics were measured by transparent and opaque chambers using a portable infrared gas analyser for the CO₂ analyses. During the winter, the CO₂ release was measured by opaque chambers analysing the samples in the laboratory with a gas chromatograph. Statistical response functions for CO₂ dynamics were constructed to evaluate the annual CO₂ exchange from the climatic data. The net CO₂ exchange was calculated for every hour in the snow‐free season. The carbon balance varied extensively depending on the weather conditions, and type and phenology of vegetation. During the growing season, the grassland was a net source while the barley field was a net sink for CO₂. However, both soils were net sources for CO₂ when autumn, winter and spring were included also. The annual CO₂ emissions from the grassland and barley soil were 750 g CO₂‐C m^?2 and 400 g CO₂‐C m^?2, respectively. The carbon accumulated in root and shoot biomass during the growing season was 330 g m^?2 for grass and 520 g m^?2 for barley. The C in the aboveground plant biomass ranged from 43 to 47% of the carbon fixed in photosynthesis (P_G) and the proportion of C in the root biomass was 10% of the carbon fixed in photosynthesis. The bare soils had 10–60% higher net CO₂ emission than the vegetated soils. These results indicate that the carbon balance of organic soils is affected by the characteristics of the prevailing plant cover. The dry summer of 1997 may have limited the growth of grass in the late summer thus reducing photosynthesis, which could be one reason for the high CO₂ release from this grass field.     

Nitrogen fertilization raises CO2 efflux from inorganic carbon: A global assessment

Nitrogen (N) fertilization is an indispensable agricultural practice worldwide, serving the survival of half of the global population. Nitrogen transformation (e.g., nitrification) in soil as well as plant N uptake releases protons and increases soil acidification. Neutralizing this acidity in carbonate‐containing soils (7.49 × 10⁹ ha; ca. 54% of the global land surface area) leads to a CO₂ release corresponding to 0.21 kg C per kg of applied N. We here for the first time raise this problem of acidification of carbonate‐containing soils and assess the global CO₂ release from pedogenic and geogenic carbonates in the upper 1 m soil depth. Based on a global N‐fertilization map and the distribution of soils containing CaCO₃, we calculated the CO₂ amount released annually from the acidification of such soils to be 7.48 × 10¹² g C/year. This level of continuous CO₂ release will remain constant at least until soils are fertilized by N. Moreover, we estimated that about 273 × 10¹² g CO₂‐C are released annually in the same process of CaCO₃ neutralization but involving liming of acid soils. These two CO₂ sources correspond to 3% of global CO₂ emissions by fossil fuel combustion or 30% of CO₂ by land‐use changes. Importantly, the duration of CO₂ release after land‐use changes usually lasts only 1–3 decades before a new C equilibrium is reached in soil. In contrast, the CO₂ released by CaCO₃ acidification cannot reach equilibrium, as long as N fertilizer is applied until it becomes completely neutralized. As the CaCO₃ amounts in soils, if present, are nearly unlimited, their complete dissolution and CO₂ release will take centuries or even millennia. This emphasizes the necessity of preventing soil acidification in N‐fertilized soils as an effective strategy to inhibit millennia of CO₂ efflux to the atmosphere. Hence, N fertilization should be strictly calculated based on plant‐demand, and overfertilization should be avoided not only because N is a source of local and regional eutrophication, but also because of the continuous CO₂ release by global acidification.     

Soil GHG fluxes are altered by N deposition: New data indicate lower N stimulation of the N2O flux and greater stimulation of the calculated C pools

The effects of nitrogen (N) deposition on soil organic carbon (C) and greenhouse gas (GHG) emissions in terrestrial ecosystems are the main drivers affecting GHG budgets under global climate change. Although many studies have been conducted on this topic, we still have little understanding of how N deposition affects soil C pools and GHG budgets at the global scale. We synthesized a comprehensive dataset of 275 sites from multiple terrestrial ecosystems around the world and quantified the responses of the global soil C pool and GHG fluxes induced by N enrichment. The results showed that the soil organic C concentration and the soil CO₂, CH₄ and N₂O emissions increased by an average of 3.7%, 0.3%, 24.3% and 91.3% under N enrichment, respectively, and that the soil CH₄ uptake decreased by 6.0%. Furthermore, the percentage increase in N₂O emissions (91.3%) was two times lower than that (215%) reported by Liu and Greaver (Ecology Letters, 2009, 12:1103–1117). There was also greater stimulation of soil C pools (15.70 kg C ha^?1 year^?1 per kg N ha^?1 year^?1) than previously reported under N deposition globally. The global N deposition results showed that croplands were the largest GHG sources (calculated as CO₂ equivalents), followed by wetlands. However, forests and grasslands were two important GHG sinks. Globally, N deposition increased the terrestrial soil C sink by 6.34 Pg CO₂/year. It also increased net soil GHG emissions by 10.20 Pg CO₂‐Geq (CO₂ equivalents)/year. Therefore, N deposition not only increased the size of the soil C pool but also increased global GHG emissions, as calculated by the global warming potential approach.     

Spatial and temporal variability of pCO2 and CO2 efflux in seven Amazonian Rivers

Current estimates of CO₂ outgassing from Amazonian rivers and streams have considerable uncertainty since they are based on limited-time surveys of pCO₂ measurements along the Amazon mainstem and mouths of major tributaries, using conservative estimates of gas exchange velocities. In order to refine basin-scale CO₂ efflux estimates from Amazonian rivers, we present a long time (5-year) dataset of direct measurements of CO₂ fluxes, gas transfer velocities and pCO₂ measurements in seven representative rivers of the lowland Amazon basin fluvial network, six non-tidal (Negro, Solimões, Teles Pires, Cristalino, Araguaia and Javaés) and one tidal river (Caxiuanã), with sizes ranging from 4th to 9th order. Surveys were conducted from January 2006 to December 2010, in a total of 389 campaigns covering all stages of their hydrographs. CO₂ fluxes and gas transfer velocities (k) were measured using floating chambers and pCO₂ was measured simultaneously by headspace extraction followed by gas chromatography analysis. Results show high CO₂ flux rate variability among rivers and hydrograph stages, ranging from ?0.8 to 15.3 μmol CO₂ m^?2 s^?1, with unexpected negative fluxes in clear-water rivers during low waters. Non-tidal rivers showed marked seasonal CO₂ flux patterns, with significantly higher exchange during high waters. Seasonality was modulated by pCO₂, which was positive and strongly correlated with discharge. In these rivers k was well correlated with wind speed, which allowed the use of wind data to model k. We estimate a release of 360 ± 60 Tg C year^?1 from Amazonian rivers and streams within a 1.47 million km² quadrant in the central lowland Amazon. Extrapolating these values to the basin upstream of Óbidos, results in an outgassing of 0.8 Pg C to the atmosphere each year. Our results are a step forward in achieving more accurate gas emission values for Amazonian rivers and their role in the annual carbon budget of the Amazon basin.