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1.
(L -His)n- dihydrogen phosphate systems are studied by ir spectroscopy in the presence of various cations and as a function of the degree of hydration. Ir continua indicate that (I) OH … N ? O?…H+N (IIR) hydrogen bonds are formed and that these bonds show high proton polarizability, which increases from the Li+ to the K+ system. In the K+?system, His-Pi-Pi chains are formed, showing particularly high proton polarizability due to collective proton motion within both hydrogen bonds. The OH N ? O?…H?N equilibria are determined from ir bands. With the Li+ system, 55% of the protons are present at the histidine residues; this percentage is smaller with the Na+ system (41%), and amounts to only 32% with the K+ system. With the increasing degree of hydration the removal of the degeneracy of νas?PO2?3 vanishes, indicating loosening of the cations from the phosphates. Nevertheless, the hydrogen bond acceptor O atom becomes more negative; a shift of the equilibrium to the right is observed in the OH… N ? O?…H+N bond. This is explained by the strong interaction of the dipole of the hydrogen bonds with the water molecules. All these results show that protons can be shifted easily in these hydrogen bonds due to their high proton polarizability. The transfer equilibria can be controlled easily by local electrical fields. In addition, these results may be of significance when phosphates interact with proteins. 相似文献
2.
Proton translocation in hydrogen bonds with large proton polarizability formed between a Schiff base and phenols 总被引:1,自引:0,他引:1
OH…N ? O?…H+N hydrogen bonds formed between N-all-transretinylidene butylamine (Schiff base) and phenols (1:1) are studied by IR spectroscopy. It is shown that both proton limiting structures of these hydrogen bonds have the same weight with Δ pKa (50%) = (pKa protonated Schiff base minus pKa phenol) = 5.5. With the largely symmetrical systems, continua demonstrate that these hydrogen bonds show great proton polarizability. In the Schiff base + tyrosine system in a non-polar solvent the residence time of the proton at the tyrosine residue is much larger than that at the Schiff base. In CH2CCl2 these hydrogen bonds show, however, still proton polarizability, i.e., the position of the proton transfer equilibrium OH…N ? O?…H+N is shifted to and fro as function of the nature of the environment of this hydrogen bond. Consequences regarding bacteriorhodopsin are discussed. 相似文献
3.
Polyhistidine-carboxylic acid systems are studied by ir spectroscopy. It is shown that OH ?N ? O?…H+N bonds formed between carboxylic groups and histidine residues are easily polarizable proton-transfer hydrogen bonds when the pKa of the protonated histidine residues is about 2.8 units larger than that of the carboxylic groups. From these results it bis concluded that OH ?N ? O? ?H+N bonds between glutamic or aspartic acid histidine residues in proteins may be easily polarizable proton-transfer bonds. Furthermore, it is demonstrated that water molecules shift the proton-transfer equilibria in these hydrogen bonds in favor of the polar structure, i.e., due to water or polar environments OH ?N ? O? ?H+N bonds with smaller ΔpKa values become easily polarizable proton-transfer hydrogen bonds. A consideration of the amide bands of polyhistidine shows that it can be present in five different conformations. It is shown that these conformational changes are strongly related to the degree of proton transfer. Hence, the degree of proton transfer, the degree of hydration, and conformation are not independent of each other, but are strongly coupled. Further proof for the interdependence of proton transfer and conformational changes are hysteresis effects, which are observed with studies of polyhistidine dependent on carboxylic acid, adsorption and desorption. OH ?N ? O? ?H+N bonds between aspartic and glutamic acid and histidine residues are present in hemoglobin, in ribonucleases, and in proteases, whereby this type of bond is preferentially found in the active centers of these enzymes. It is pointed out that hydrogen bonds with such interaction properties should be of great significance for structure and especially functions of proteins in which they are present. 相似文献
4.
The nature of hydrogen bonds formed between carboxylic acid residues and histidine residues in proteins is studied by ir spectroscopy. Poly(glutamic acid) [(Glu)n] is investigated with various monomer N bases. The position of the proton transfer equilibrium OH…?N ? O?…?H+N is determined considering the bands of the carboxylic group. It is shown that largely symmetrical double minimum energy surfaces are present in the OH…?N ? O?…?H+N bonds when the pKa of the protonated N base is two values larger than that of the carboxylic groups of (Glu)n. Hence OH…?N ? O?…?H+N bonds between glutamic and aspartic acid residues and histidine residues in proteins may be easily polarizable proton transfer hydrogen bonds. The polarizability of these bonds is one to two orders of magnitude larger than usual electron polarizabilities; therefore, these bonds strongly interact with their environment. It is demonstrated that water molecules shift these proton transfer equilibria in favor of the polar proton boundary structure. The access of water molecules to such bonds in proteins and therefore the position of this proton transfer equilibrium is dependent on conformation. The amide bands show that (Glu)n is α-helical with all systems. The only exception is the (Glu)n-n-propylamine system. When this system is hydrated (Glu)n is α-helical, too. When it is dried, however, (Glu)n forms antiparallel β-structure. This conformational transition, dependent on degree of hydration, is reversible. An excess of n-propylamine has the same effect on conformation as hydration. 相似文献
5.
(L -Cys)n, (L -Lys)n, and (L -Glu)n were studied by ir spectroscopy in terms of their degree of deprotonation or protonation. It is shown that structurally symmetrical, easily polarizable SH ?S? ? ?S ?HS, N+H ?N ? N ?H+N, and OH ?O? ? ?O ?HO hydrogen bonds are formed between the side chains. The different wave number distributions of the ir continua caused by these hydrogen bonds show that the barrier in the double-minimum proton potential decreases in the series of these hydrogen bonds. The stability of these hydrogen bonds against hydration increases in this series. The OH ?O? ? ?O ?HO bonds are not broken by small amounts of water. With (L -Cys)n the formation of easily polarizable hydrogen bonds and a β-structure–coil transition are strongly interdependent. As a result of this coupling effect, the β-structure–coil transition becomes cooperative. With (L -Glu)n, the formation of the polarizable hydrogen bonds and the observed conformational change are independent processes. The (L -Glu)n conformation changes from α-helix to coil only if more than 80% of the residues are deprotonated. Finally, on the basis of the various types of easily polarizable hydrogen bonds, charge shifts in active centers of enzymes and the proton-conducting mechanism through hydrophobic regions of biological membranes are discussed. 相似文献
6.
Pushti Prakash Rastogi Wolfgang Kristof Georg Zundel 《International journal of biological macromolecules》1981,3(3):154-158
The nature of the hydrogen bonds formed between glutamic acid and histidine residues between aspartic acid and histidine residues is studied by i.r. spectroscopy. These studies were performed with and with associates of monomeric Glu + His and Asp + His systems in solutions whereby these amino acids had protected α-amino and α-carboxylic groups. It is shown that the OH …N??O?H+N bonds are easily polarizable proton transfer hydrogen bonds. The residence time of the proton at the His is a little larger in the case of the Asp + His than in the case of the Glu + His systems. Polar environments shift this proton transfer equilibrium in favour of the proton limiting structure ?O?H+N, and less polar ones in favour of the structure OH?N. These results demonstrate that the large proton polarizability of the hydrogen bonded system in the active centre of chymotrypsin is responsible for the charge shift caused by the substrate, and thus for the increase in reactivity of the serine residue and the catalytic activity of the enzyme. 相似文献
7.
(L -Cys)n + N-base systems and (L -Cys)n + (L -Lys)n systems were studied by ir spectroscopy. It is shown that in the water-free systems, SH ?N ? S? ?H+N hydrogen bonds are formed. With the (L -Cys)n + N-base systems, both proton-limiting structures in the SH ?N ? S? ?H+N bonds have equal weight when the pKa of the protonated N-base is 2 pKa units larger than that of (L -Cys)n. The same is true with the water-free (L -Cys)n + (L -Lys)n system. Thus, with regard to the type of proton potentials present, these hydrogen bonds are proton-transfer hydrogen bonds showing very large proton polarizabilities. This is confirmed by the occurrence of continua in the ir spectra. Small amounts of water open these hydrogen bonds and increase the transfer of the proton to (L -Lys)n. In the (L -Lys)n + N-base systems, with increasing proton transfer the backbone of (L -Cys)n changes from antiparallel β-structure to coil. In (L -Cys)n + (L -Lys)n, the conformation is determined by the (L -Lys)n conformation and changes depending on the chain length of (L -Lys)n. Finally, the reactivity increase in the active center of fatty acid synthetase, which should be caused by the shift of a proton, is discussed on the basis of the great proton polarizability of the cysteine–lysine hydrogen bonds. 相似文献
8.
Michael Matthies Georg Zundel 《Biochemical and biophysical research communications》1977,74(2):831-837
IR spectra of aqueous solutions of 1:1 mixtures of H2PO4? and various N bases have been studied as models for (POH?N) → (P?O?H+N) hydrogen bonds. 50% proton transfer is observed when the pKa of the protonated N base is 1.1 smaller than that of the phosphate group. The hydrogen bonds are easily polarizable near this equilibrium. These results strongly support the conclusion that such bonds contribute 1) to the self-association of ATP and ADP and 2) to the association of the hydrolysis products ADP and inorganic phosphate. 相似文献
9.
Poly-L -histidine (PLH) films at different degrees of protonation were produced mid subjected to infrared spectroscopic investigation (range 4000-650 cm?1). In addition, the N-deuterated film spectra were plotted. The amide II and III bands show that the peptide group is present in the trans form. The amide I and II bands show that at 0% and 50% protonation the PLH occurs as an α-helix and at 100% protonation as a random coil with some ranges in β structure. At 0% and 50% protonation, no hydration water is bound to the backbone. At 0% protonation all NH groups are linked to each other or to water molecules via hydrogen bonds. At 50% protonation NH+?N bonds form between the imidazole rings. These protons are present in continuous energy level distribution. Such bonds with tunneling protons are extremely polarizable and between these bonds may act proton dispersion forces. The Cl? ions are bonded to the NH groups of the imidazole groups. The hydration water is bonded to the Cl?? ions and to the NH groups. At 100% protonation, hydration water is bonded also to the CO groups of the backbone. The NH groups of the backbone, like those of the rings, endeavor especially in the dry state to bond to the Cl? ions. This leads to a strong steric constraint of the random coil. 相似文献
10.
Pushti Prakash Rastogi Wolfgang Kristof Georg Zundel 《Biochemical and biophysical research communications》1980,95(2):902-908
Histidinium perchlorate having protecting groups at the α-amino and α-carboxylate group is studied by IR spectroscopy as function of the addition of protected histidine molecules. An intense continuous absorption arises, indicating that the N+H…N ? N…H+N formed are easily polarizable hydrogen bonds. From the integral absorbance of a band the concentration of the histidine-histidinium complex, i.e. the concentration of the easily polarizable hydrogen bonds is determined. It is shown that the absorbance of the continuum increases in proportion to the concentration of the easily polarizable N+H…N ? N…H+N bonds. Finally, it is discussed that via such an easily polarizable histidine-histidinium hydrogen bond a proton translocation in the active center of ribonuclease A may occur. 相似文献
11.
Knowledge about water desorption is important to give a full picture of water diffusion in montmorillonites (MMT), which is a driving factor in MMT swelling. The desorption paths and energetics of water molecules from the surface of MMT with trapped Li+, Na+ or K+ counterions were studied using periodic density functional theory calculations. Two paths—surface and vacuum desorption—were designed for water desorption starting from a stationary structure in which water bonds with both the counterion and the MMT surface. Surface desorption is energetically more favorable than vacuum desorption due to water–surface hydrogen bonds that help stabilize the intermediate structure of water released from the counterion. The energy barriers of water desorption are in the order of Li+?>?Na+?>?K+, which can be attributed to the short ionic radius of Li+, which favors strong binding with the water molecule. The temperature dependence of water adsorption and desorption rates were compared based on the computed activation energies. Our calculations reveal that the water desorption on the MMT surface has a different mechanism from water adsorption, which results from surface effects favoring stabilization of water conformers during the desorption process. 相似文献
12.
An intramolecular hydrogen bond with large proton polarizability within the head group of phosphatidylserine. An infrared investigation.
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Films of O-phospho-L-serine-P-ethylester (PSE) were studied by infrared spectroscopy. PSE films were studied pure and as 1:1 mixture with LiOH, NaOH, KOH, and Ca(OH)2 as a function of the degree of hydration. The same investigations were performed if (L-glu)n was added to the system (ratio 1:1, PSE/glu residue). In the PSE molecules an intramolecular (I) COOH...-OP in equilibrium with COO-...HOP (II) hydrogen bond is present. In this bond a double minimum proton potential occurs and it shows large proton polarizability. This hydrogen bond is relatively stable as shown by the neutralization experiments. At low degree of hydration the cations are present at the phosphate groups. The Li ions polarize the intramolecular hydrogen bonds much more than the other cations, i.e., the weight of the proton-limiting structure COOH...-OP is increased by Li ions. Regarding these results one has to assume that such a hydrogen bond is also present in the phosphatidylserine head groups. It is discussed that such hydrogen bonds could be part of a lateral charge-conducting system in the polar surfaces of biological membranes. Such systems could connect proton-creating and proton-consuming centers at the membrane surface and conduct positive charge at an extremely high rate. 相似文献
13.
The neutral, noncyclic, imide and ether containing ionophore AS701, has been developed as Li+-selective molecule, to be used potentially as an aid in the Li+-therapy of manic-depressive illness. The present report is a characterization of this molecule in neutral lipid bilayer membranes. This ionophore was found to the bilayers Li+-selective, acting as a selective carrier of monovalent cations. In addition, this molecule was found to be capable of acting as a selective carrier of monovalent anions. For both types of ions, the rate-limitting step in the process of permeation was found to be the diffusion of the carrier-ion complex through the membrane. The membrane-permeating species were found to be 2 : 1 carrier-ion complexes, carrying either a monovalent cation or a monovalent anion. The selectivity sequences among the ions studied being: Li+(1) > ClO4?(0.7) > Na+(0.07) > K+(0.016) > Rb+(0.0095) > Cs+(0.0083) > Cl?(0.001). Mg2+ and SO42? were found to be impermeant (under present experimental conditions). This sequence shows that the AS701 molecule has low selectivity for ions present in biological media, among those studied (i.e. Na+, K+, Mg2+, Cl2? and SO42?). This indicates that these ions will not interfere in the Li+ permeability induced by this carrier in vivo, and that the carrier will not interfere in the normal transport processes of these ions. 相似文献
14.
The OH N O– H+N hydrogen bonds formed between tyrosine and lysine, and between glutamic acid and lysine residues are studied by infrared spectroscopy considering the following systems: (l-lys)n + phenol, copoly (l-lys, l-tyr)n, (l-lys)n + (l-tyr)n and (l-lys)n + (l-glu)n. The phenol-lysine hydrogen bonds are largely symmetrical in the average if the pKa of the protonated lysine is 2.2 units larger than that of the phenols. In the case of the hydrogen bonds between tyrosine and lysine residues in copoly (l-lys, l-tyr)n and (l-lys)n + (l-tyr)n, the weight of the proton limiting structure OH N is 80–90%, and that of the polar O– H+N structure 10–20%. Double minimum proton potentials occur but the proton is preferentially present at the tyrosine residues. In the (l-lys)n + (l-glu)n system, the protons are present at the lysine residues. Thus, these hydrogen bonds have very large dipole moments (about 10 D). With the lysine-phenole hydrogen bonds, hydration shifts the proton transfer equilibrium a little in favour of the polar proton limiting structure O– H+N. These hydrogen bonds are broken to a large extent, however, when only about 3 water molecules are present per lysine residue. When less water is present, as in the copoly (l-lys, l-tyr)n and (l-lys)n + (l-tyr)n systems, these hydrogen bonds are, however, formed quantitatively. Thus — as discussed in this paper — the tyrosine-lysine hydrogen bonds can participate in proton conducting hydrogen bonded systems — as, for instance, present in bacteriorhodopsin — performing the proton transport through hydrophobic regions of biological membranes. 相似文献
15.
Ionic Regulation for Cytokinin-dependent Betacyanin Synthesis in Amaranthus Seedlings 总被引:8,自引:7,他引:1
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Elliott DC 《Plant physiology》1979,63(2):264-268
Potassium ions at low concentrations stimulate cytokinin-dependent betacyanin synthesis in Amaranthus tricolor seedlings more than other alkali metal ions when tested as the chloride salts. The sequence of relative stimulation is K+ > Rb+ > (Na+ = Li+). Calcium and Mg2+ ions are inhibitory at concentrations > 1 millimolar when tested as chlorides. Anions also have an effect on the degree of alkali metal stimulation in the order PO43− > NO3− > Cl−. The high activity of phosphate may be partly due to its chelating effect on inhibitory Ca2+ ions, or to effects on K+ uptake. A mixture of Na+ and K+ in the presence of phosphate is more effective than either cation alone. This result may be due either to effects on tyrosine transport or on the potassium uptake system. Phytochrome-dependent betacyanin synthesis shows the same stimulation by Na+ plus K+. The effect of a number of inhibitors of transport systems on betacyanin accumulation is reported. The possible role of the ionic environment of cells in their metabolic regulation is discussed, particularly in relation to cytokinin action. 相似文献
16.
Hydrogen bonds formed between photosynthetic reaction centers (RCs) and their cofactors were shown to affect the efficacy of electron transfer. The mechanism of such influence is determined by sensitivity of hydrogen bonds to electron density rearrangements, which alter hydrogen bonds potential energy surface. Quantum chemistry calculations were carried out on a system consisting of a primary quinone QA, non-heme Fe2+ ion and neighboring residues. The primary quinone forms two hydrogen bonds with its environment, one of which was shown to be highly sensitive to the QA state. In the case of the reduced primary quinone two stable hydrogen bond proton positions were shown to exist on [QA-HisM219] hydrogen bond line, while there is only one stable proton position in the case of the oxidized primary quinone. Taking into account this fact and also the ability of proton to transfer between potential energy wells along a hydrogen bond, theoretical study of temperature dependence of hydrogen bond polarization was carried out. Current theory was successfully applied to interpret dark P+/QA− recombination rate temperature dependence. 相似文献
17.
The effects of K+, Na+ and ATP on the gastric (H+ + K+)-ATPase were investigated at various pH. The enzyme was phosphorylated by ATP with a pseudo-first-order rate constant of 3650 min?1 at pH 7.4. This rate constant increased to a maximal value of about 7900 min?1 when pH was decreased to 6.0. Alkalinization decreased the rate constant. At pH 8.0 it was 1290 min?1. Additions of 5 mM K+ or Na+, did not change the rate constant at acidic pH, while at neutral or alkaline pH a decrease was observed. Dephosphorylation of phosphoenzyme in lyophilized vesicles was dependent on K+, but not on Na+. Alkaline pH increased the rate of dephosphorylation. K+ stimulated the ATPase and p-nitrophenylphosphatase activities. At high concentrations K+ was inhibitory. Below pH 7.0 Na+ had little or no effect on the ATPase and p-nitrophenylphosphatase, while at alkaline pH, Na+ inhibited both activities. The effect of extravesicular pH on transport of H+ was investigated. At pH 6.5 the apparent Km for ATP was 2.7 μM and increased little when K+ was added extravesicularly. At pH 7.5, millimolar concentrations of K+ increased the apparent Km for ATP. Extravesicular K+ and Na+ inhibited the transport of H+. The inhibition was strongest at alkaline pH and only slight at neutral or acidic pH, suggesting a competition between the alkali metal ions and hydrogen ions at a common binding site on the cytoplasmic side of the membrane. Two H+-producing reactions as possible candidates as physiological regulators of (H+ + K+)-ATPase were investigated. Firstly, the hydrolysis of ATP per se, and secondly, the hydration of CO2 and the subsequent formation of H+ and HCO3?. The amount of hydrogen ions formed in the ATPase reaction was highest at alkaline pH. The H+/ATP ratio was about 1 at pH 8.0. When CO2 was added to the reaction medium there was no change in the rate of hydrogen ion transport at pH 7.0, but at pH 8.0 the rate increased 4-times upon the addition of 0.4 mM CO2. The results indicate a possible co-operation in the production of acid between the H+ + K+-ATPase and a carbonic anhydrase associated with the vesicular membrane. 相似文献
18.
Negative conductance caused by entry of sodium and cesium ions into the potassium channels of squid axons 总被引:44,自引:25,他引:19
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Internal Cs+, Na+, Li+, and, to a lesser degree, Rb+ interfere with outward current through the K pores in voltage clamped squid axons. Addition of 100 mM NaF to the perfusion medium cuts outward current for large depolarizations about in half, and causes negative conductance over a range of membrane voltages. For example, suddenly reducing membrane potential from +100 to +60 mv increases the magnitude of the outward current. Internal Cs+ and, to a small extent, Li+, also cause negative conductance. Na+ ions permeate at least 17 times less well through the K pores than K+, and Cs+ does not permeate measurably. The results strongly suggest that K pores have a wide and not very selective inner mouth, which accepts K+, Na+, Li+, Cs+, tetraethylammonium ion (TEA+), and other ions. The diameter of the mouth must be at least 8 A, which is the diameter of a TEA+ ion. K+ ions in the mouths probably have full hydration shells. The remainder of the pore is postulated to be 2.6–3.0 A in diameter, large enough for K+ and Rb+ but too small for Cs+ and TEA+. We postulate that Na+ ions do not enter the narrower part of the pore because they are too small to fit well in the coordination cages provided by the pore as replacements for the water molecules surrounding an ion. 相似文献
19.
Yingqiang Fu Lili Chen Jiaying Ke Yajun Gao Shijie Zhang Shaohong Li 《Molecular simulation》2013,39(6):491-497
We propose a new diffusion model describing the diffusion behaviours of hydrated ions in the process of nanofiltration (NF) based on the random walk (RW) theory when the NF membrane is uncharged or low charged. In this model, the hydration of ions and their deformation capacity are considered. The structure of the membrane is idealised into a lozenge shape and the diameter of membrane pore is defined as gapsize. A computer program named RW system in chemistry is developed to simulate based on this model. Six familiar ions Li+, Na+, Mg2+, Al3+, K+ and Ca2+ are investigated. Their characteristics are calculated by Gaussian 03, Pople, Inc., Wallingford, CT. The diffusivities of hydrated ions are calculated and discussed. The results show that the hydration of ions cannot be ignored in NF process when the membrane pore size is near the dimensions of the hydrated ions. 相似文献
20.
It has been shown that the intracellular concentrations of Na+, K+, and Cl? ions in Desulfonatronum thiodismutans depend on the extracellular concentration of Na+ ions. An increase in the extracellular concentration of Na+ results in the accumulation of K+ ions in cells, which points to the possibility that these ions perform an osmoprotective function. When the concentration of the NaCl added to the medium was increased to 4%, the concentration gradient of Cl? ions changed insignificantly. It was found that D. thiodismutans contains two forms of hydrogenase—periplasmic and cytoplasmic. Both enzymes are capable of functioning in solutions with high ionic force; however they exhibit different sensitivities to Na+, K+, and Li+ salts and pH. The enzymes were found to be resistant to high concentrations of Na+ and K+ chlorides and Na+ bicarbonate. The cytoplasmic hydrogenase differed significantly from the periplasmic one in having much higher salt tolerance and lower pH optimum. The activity of these enzymes depended on the nature of both the cationic and anionic components of the salts. For instance, the inhibitory effect of NaCl was less pronounced than that of LiCl, whereas Na+ and Li+ sulfates inhibited the activity of both hydrogenase types to an equal degree. The highest activity of these enzymes was observed at low Na+ concentrations, close to those typical of cells growing at optimal salt concentrations. 相似文献