Ecological and socio-economic factors affecting extinction risk in parrots

Parrots (Psittaciformes) are among the most threatened bird orders with 28 % (111 of 398) of extant species classified as threatened under IUCN criteria. We confirmed that parrots have a lower Red List Index (higher aggregate extinction risk) than other comparable bird groups, and modeled the factors associated with extinction risk. Our analyses included intrinsic biological, life history and ecological attributes, external anthropogenic threats, and socio-economic variables associated with the countries where the parrot species occur, while we controlled for phylogenetic dependence among species. We found that the likelihood of parrot species being classified as threatened was less for species with larger historical distribution size, but was greater for species with high forest dependency, large body size, long generation time, and greater proportion of the human population living in urban areas in the countries encompassing the parrots’ home ranges. The severity of extinction risk (from vulnerable to critically endangered) was positively related to the per capita gross domestic product (GDP) of the countries of occurrence, endemism to a single country, and lower for species used as pets. A disproportionate number of 16 extinct parrot species were endemic to islands and single countries, and were large bodied, habitat specialists. Agriculture, hunting, trapping, and logging are the most frequent threats to parrots worldwide, with variation in importance among regions. We use multiple methods to rank countries with disproportionately high numbers of threatened parrot species. Our results promote understanding of global and regional factors associated with endangerment in this highly threatened taxonomic group, and will enhance the prioritization of conservation actions.     

Large-scale spatial and temporal dynamics of the vulnerable and highly mobile superb parrot

Aim To investigate the spatial and temporal dynamics of the vulnerable and highly mobile superb parrot (Polytelis swainsonii) across its range in south‐eastern mainland Australia. Location South‐eastern Australia (27°–37° S latitude and 141°–151° E longitude). Methods We used generalized additive models (GAMs) to model time‐specific bird atlas occurrence data against time‐specific plant productivity data, plus a range of environmental predictor variables. We then examined the effects of environmental variables on the temporal and spatial patterns of predicted abundance and distribution of the superb parrot using a correlative mapping approach. Results Key findings from GAM analysis were: (1) there was a strong positive relationship between abundance and plant productivity in all regions, but (2) the response of abundance to other predictor variables often differed between regions. Correlative mapping predictions of the abundance and distribution of the superb parrot also indicated that: (1) predicted abundance varied through time and space, (2) predicted abundance sometimes decreased in all regions, but at other times some regions had high abundance when others had low, and (3) changes in plant productivity (and therefore climate) were associated with this variation. Main conclusion The superb parrot favours productive landscapes that are also favoured for agriculture. Movements appear to be associated with seasonal and year to year climate variability. Thus, variation in the recorded abundance of the superb parrot may mask population trends, suggesting that existing population estimates are unreliable. Also, high abundances in some areas, and at some times, may reflect deteriorating habitat conditions elsewhere rather than species recovery. Temporal variability in the distribution of the superb parrot makes it difficult to identify specific drought refugia. Consequently, through time, as key habitat continues to deteriorate, the species will become increasingly vulnerable and threatened. Whole‐landscape habitat conservation and restoration strategies are therefore needed to sustain superb parrot populations in the long‐term.     

Parrot claylick distribution in South America: do patterns of “where” help answer the question “why”?

Geophagy is well known among some Neotropical parrots. The clay apparently adsorbs dietary toxins and/or provides supplemental nutrients. We used location data and 23 environmental layers to develop a predictive model of claylick distribution using Maxent software. We related species characteristics to claylick use and examined how parrot assemblages using claylicks changed with distance from the centre of claylick distribution. Fifty‐two parrot claylicks were reported from an area of ca 4 million km² but over 50% were restricted to a 35 000 km² region of southeast Peru and northern Bolivia. Claylicks were strongly associated with moist forest on younger (<65 millions of yr) geological formations and exposed river banks. The predictive model of claylick distribution matched our reported range well, with precipitation of warmest quarter, land cover, temperature seasonality, and distance from the ocean being most important predictors of claylick presence. Twenty‐six of the region's 46 parrot species visited claylicks. Species differed greatly in their lick use, but body size, dietary breadth, abundance and other traits were poor predictors of lick use. We are confident that our survey identified the distribution of major parrot claylicks in South America, although less conspicuous parrot geophagy may occur elsewhere. We suggest that claylick distribution reflects both underlying geology (allowing claylick formation in only some regions) and the physiological need for geophagy among parrots in different parts of the continent. Data on the latter are inconclusive, but we argue that parrot claylick distribution supports the contention that geophagy is related more to sodium deficiencies than to protection from dietary toxins.     

Parrots consume sodium‐rich palms in the sodium‐deprived landscape of the Western Amazon Basin

Herbivorous animals face shortages of different minerals in different geographic areas. In the Amazon Basin, sodium is often limiting, driving herbivores to seek supplemental sources. In the lowlands of the western Amazon Basin, parrots commonly consume sodium‐rich soils at clay licks but lick use varies widely among species, and to date, parrots in the region have not been reported consuming other supplemental sodium sources. We document 11 species of psittacines consuming sodium‐rich leaves and trunks of Attalea butyracea palms growing on sodium‐rich soils in lowland Peru. Consumed palms had more sodium and less potassium than uneaten A. butyracea palms and other palm species in the area. Among A. butyracea palm parts, sodium and Na:K ratios were highest in trunks (consumed by parrots in 94% of the 387 foraging bouts recorded) and lowest in leaves (consumed in only 14% of foraging bouts). The low potassium and high Na:K ratio suggest that birds may be seeking not just any sodium sources, but those low in potassium, as potassium is known to exacerbate dietary sodium shortages. Use of the palms and species’ abundance in the study area were not correlated. Instead, parrot species that consumed palms the most were those that use relatively few traditional soil clay licks. This finding suggests that parrot species in the region have fundamental differences in preferred strategies for obtaining supplemental sodium and may help explain documented interspecific differences in geophagy.     

When and where to move: Dynamic occupancy models explain the range dynamics of a food nomadic bird under climate and land cover change

Globally, long‐term research is critical to monitor the responses of tropical species to climate and land cover change at the range scale. Citizen science surveys can reveal the long‐term persistence of poorly known nomadic tropical birds occupying fragmented forest patches. We applied dynamic occupancy models to 13 years (2002–2014) of citizen science‐driven presence/absence data on Cape parrot (Poicephalus robustus), a food nomadic bird endemic to South Africa. We modeled its underlying range dynamics as a function of resource distribution, and change in climate and land cover through the estimation of colonization and extinction patterns. The range occupancy of Cape parrot changed little over time (ψ = 0.75–0.83) because extinction was balanced by recolonization. Yet, there was considerable regional variability in occupancy and detection probability increased over the years. Colonizations increased with warmer temperature and area of orchards, thus explaining their range shifts southeastwards in recent years. Although colonizations were higher in the presence of nests and yellowwood trees (Afrocarpus and Podocarpus spp.), the extinctions in small forest patches (≤227 ha) and during low precipitation (≤41 mm) are attributed to resource constraints and unsuitable climatic conditions. Loss of indigenous forest cover and artificial lake/water bodies increased extinction probabilities of Cape parrot. The land use matrix (fruit farms, gardens, and cultivations) surrounding forest patches provides alternative food sources, thereby facilitating spatiotemporal colonization and extinction in the human‐modified matrix. Our models show that Cape parrots are vulnerable to extreme climatic conditions such as drought which is predicted to increase under climate change. Therefore, management of optimum sized high‐quality forest patches is essential for long‐term survival of Cape parrot populations. Our novel application of dynamic occupancy models to long‐term citizen science monitoring data unfolds the complex relationships between the environmental dynamics and range fluctuations of this food nomadic species.     

Diet and Geophagy Across a Western Amazonian Parrot Assemblage

We identified species‐ and community‐level dietary characteristics for a species‐rich Amazonian parrot assemblage to determine relationships among dietary metrics and use of geophagy sites. Previous studies suggest that soil is consumed at geophagy sites in this region mainly to supplement dietary sodium. We accumulated 1400 feeding records for 16 parrot species over 2 yr and found that seeds, flowers, and fruit pulp featured prominently in diets, while bark, insects, and lichen were consumed in small quantities. Food availability across 1819 trees was measured, and we found that flower availability was highest in the dry season and fruit production peaked in the wet season, but that phenology patterns of the 20 most commonly foraged plant species suggest no serious food bottlenecks. Partitioning of available food resources among the 13 most commonly encountered parrots is suggested by an ordination analysis (DCA), which placed the large macaws (Ara) with the Amazona parrots at the ‘primary forest’ end of a dietary resource axis and four smaller species at the ‘successional forest’ end of the axis. Parrot species associated with successional forest also consumed less plant species overall. Furthermore, these parrot species consuming successional forest resources had higher claylick visitation rates than those consuming primary forest resources suggesting they derive the greatest benefits from soil consumption.     

Twenty-two polymorphic microsatellite loci aimed at detecting illegal trade in the Cape parrot, Poicephalus robustus (Psittacidae, AVES)

Twenty-two polymorphic microsatellite loci were characterized in the Cape parrot, Poicephalus robustus. Nineteen loci were newly isolated from two Cape parrot genomic libraries, and three loci isolated from other parrot species. Loci were characterized in 40 unrelated captive Cape parrots held by aviculturalists. The loci displayed between two and 24 alleles, with the observed heterozygosities ranging between 0.10 and 0.94. This locus set is suitable for identifying clarifying parentage (parentage exclusion probabilities of P_E1 = 0.0004 and P_E2 = 0.000001). Candidate parents for any Cape parrot individual can now be genotyped to distinguish between individuals, which are truly captive bred and those suspected of being wild-caught birds. Cross-species analysis found up to 31 loci to be polymorphic across 24 additional parrot species tested.     

Characterization of 12 microsatellite primer pairs for the African grey parrot,Psittacus erithacus and their conservation across the Psittaciformes

This study describes 12 microsatellite loci identified in the African grey parrot Psittacus erithacus. Eleven were polymorphic, with observed heterozygosities 42–94% (average 68) and exclusion powers of P_E1 = 0.996 and P_E2 = 0.999. Microsatellites have previously been developed for a number of other parrots but showed limited cross‐species polymorphism. Here high levels of cross‐species amplification were observed: 71% of 32 Psittacines (22 genera). At least seven loci, 58%, were polymorphic in other African parrots as well as Neotropical and Australasian parrots, which diverged from the African parrots c30.6 and over 41.4 million years ago, respectively.     

Energetics of New Zealand's temperate parrots

Abstract

As in most parrots (Order: Psittaciformes) studied, New Zealand species have, independent of body mass, high basal rates of metabolism, low thermal conductances, and precisely regulated body temperatures. An analysis of covariance showed that basal rate in parrots correlates with body mass and thermal climate; temperate species have basal rates that are 21% higher than those of tropical species; and New Zealand's parrot have basal rates 32% higher than expected from body mass. Present information suggests that basal rate in parrots appears to be correlated neither with water availability in the environment nor with food habits. High basal rates in parrots are associated with large pectoral muscle masses. The very small pectoral muscle masses of the kakapo, Strigops habroptilus, predict that this flightless parrot has a low basal rate.     

Spatial and seasonal variation in abundance within an insular grey parrot population

Populations of Psittacidae are endangered by habitat loss and the international pet market. The grey parrot (Psittacus erithacus) is among the most traded species, yet little is known about densities and their variability in time and space. The population of grey parrots on the island of Príncipe (Gulf of Guinea) was estimated with distance sampling, in both pre‐ and postbreeding seasons. Abundance was related to a range of habitat features using generalized additive models. Densities averaged 48 ± 3 (SE) individuals km^?2 in the prebreeding and 59 ± 4 in the postbreeding season, both extremely high compared to elsewhere in Africa and to other parrot species. Despite a population of 6000–8000 individuals over only 139 km², parrots were patchily distributed, being unrecorded in ~25% of surveyed areas. Abundance varied seasonally, with densities being significantly higher in secondary compared to primary forest in the post‐ but not in the prebreeding season. Abundance was most tied to the presence of nest‐tree species prior to breeding and to feeding‐tree species and lightly sloping ground after breeding. These results highlight the need to preserve a matrix of habitat types to provide resources for parrots across seasons and ensure that surveys recognize seasonality in habitat use as a potential bias.     

Founder populations and the current status of exotic parrots in South Africa

Parrots (families Psittacidae and Cacatuidae) are one of the most threatened taxa of birds, with a combination of threats to wild populations, including capture for the cage bird market, habitat modification and destruction, persecution, disease, and threats from introduced species. As a result of the group's popularity as a cage bird, and the transport of vast numbers of individuals across the globe (both legally and illegally), the establishment of populations beyond their natural ranges has likely been enhanced. This review reports on c. 30 parrot species that have been observed outside of their natural ranges in South Africa, most likely derived, and supplemented, from both intentional and unintentional releases. Of these, the Rose-ringed Parakeet Psittacula krameri and at least one Agapornis species have become established as breeding wild populations. Like other invasive species they may pose threats to local biodiversity; however, all are strongly associated with major urban centres where significant changes to natural biota have already occurred.     

Positive range–abundance relationships in Indo‐Pacific bird communities

Reeve et al. (2016, Ecography, 39 , 990–997) recently reported negative range–abundance relationships in Indo‐Pacific bird communities and speculated that geographical isolation facilitates the evolution of broad‐niched, small‐ranged and abundant species. We tested this relationship using a large independent data set on range and abundance of birds across New Caledonia (over 4,000 bird census points for 17,300 km²). In contradiction to Reeve et al. (2016, Ecography, 39 , 990–997), we found clear evidence that range–abundance relationships are positive and endemic species have narrower habitat niches than wide‐range species. Our findings are likely valid also for other islands in the Indo‐Pacific.     

The Behavior and Interactions of Birds Visiting Erythrina fusca Flowers in the Colombian Amazon1

I observed 22 species of birds visiting flowering Erythrina fusca trees at Matamatá, Amazonas, Colombia. The large orange flowers of E. fusca are adapted for pollination by birds and are protected from illegitimate visits by a petal that covers the nectaries and anthers until displaced by a foraging bird. Experiments with flowers bagged to exclude potential pollinators demonstrated that the flowers do not open without assistance. At Matamatá, parrots are the most frequent visitors to flowering E. fusca, and two species, Dusky‐headed Parakeet (Aratinga weddellii) and Cobalt‐winged Parakeet (Brotogeris cyanoptera), appear to be the main pollinators. This is only the fourth report of Neotropical parrots acting as pollinating agents. At least five other parrot species fed on the nectar or flowers of E. fusca but destroyed the flowers in the process. Orange‐backed Troupials (Icterus jamacaii) were the only other species observed opening E. fusca flowers nondestructively and are likely to be pollinators. Hummingbirds were common visitors to E. fusca flowers and some species were found to carry E. fusca pollen; however, hummingbirds were unable to open the flowers themselves and relied on other visitors to open the flowers for them. The number of hummingbird visits to a flowering E. fusca tree was positively correlated with the number of visits by parrots and icterids, but not with the number of mature flowers, indicating that legitimate visitors facilitate access by hummingbirds.     

The parrots (Aves: Psittaciformes) from the Middle Miocene of Sansan (Gers,Southern France)

The occurrence of Archaeopsittacus sp. (Psittaciformes) in the fossil deposits of Sansan (France) is reported, testifying to a survival of this genus in the Middle Miocene, as Archaeopsittacus verreauxi was described from the Early Miocene of Saint-Gérand-le-Puy (France) and was recorded only from its type locality. The data discussed here indicate the presence of two parrot species from Sansan, as it is the type locality of another parrot species, Pararallus dispar, only known from this locality. The differences between the humeri of these two taxa are described in detail, together with the differences from the other European fossil parrot species. The presence of more than one species of parrot in the same locality is not rare, but in Europe it is recorded in Sansan for the second time. Evidence for parrots also confirms the paleoenvironmental reconstruction of Sansan, as parrots are primarily arboreal species. Archaeopsittacus also represents one of the few common elements between the Early and Middle Miocene European bird assemblages.     

Contrasting patterns of change in the distribution and abundance of farmland birds in relation to farming system in lowland Britain

Patterns of change in distribution (presence/absence) and abundance since the late 1960s were examined in 20 species of farmland bird in southern Britain in predominantly arable (eastern), predominantly mixed (central) and predominantly grassland (western) regions. Comparisons were made between changes in distribution and in abundance to determine whether these measures show similar relationships to environmental change. Local extinctions of selected species and reductions in species richness were significantly greater in the predominantly grassland region. Decreases in abundance were greatest in seven species in the predominantly arable region, two in the mixed region and nine in the grassland region. Changes in distribution and abundance showed consistent patterns in three species, turtle dove Streptopelia turtur L., yellow wagtail Motacilla flava L. and reed bunting Emberiza schoeniclus L. In another four species, grey partridge Perdix perdix L., lapwing Vanellus vanellus L., tree sparrow Passer montanus L. and corn bunting Miliaria calandra L., decreases in abundance were greatest in the arable region, yet declines in distribution were lowest. For other individual species, changes in distribution were too small to draw any conclusions in relation to farm type. We suggest that modern grassland systems are suboptimal habitats compared to arable or mixed agricultural land for many farmland species that occur at relatively low density in the more western, grass‐dominated region. Declines in abundance are therefore more likely to lead to local extinction in these areas than in eastern areas where abundance is higher. However, the role of changes in grassland management on bird populations requires further research. It is suggested that conclusions drawn from changes in distribution alone, in the absence of supporting data on changes in abundance, may be misleading where the aim is to assess how large‐scale spatial dynamics of populations relate to environmental change.     

Net‐spinning caddisfly distribution in large regulated rivers

1. Most of the world's large rivers are dammed for the purposes of water storage, flood control, and power production. Damming rivers fundamentally alters water temperature and flows in tailwater ecosystems, which in turn affects the presence and abundance of downstream biota.
2. We collaborated with more than 200 citizen scientists to collect 2,194 light trap samples across 2 years and more than 2,000 river km. Samples contained 16,222 net‐spinning caddisfly (Hydropsyche) individuals across six species. We used these data to model the distribution of Hydropsyche throughout the Colorado River Basin in the western U.S.A. to identify the roles of water temperature, flows, and species‐specific morphology in determining aquatic species distributions throughout a large arid watershed that has been heavily altered by damming.
3. We predicted that water temperatures would determine Hydropsyche presence and abundance to a greater extent than diel variation in river stage associated with hydropower production. Among many species, adult female Hydropsychids are morphologically adapted to swim to deep‐water oviposition sites. We predicted that the presence of this ability would negate the otherwise deleterious effects of high stage change on caddisfly egg mortality.
4. We found that distributions of the two most widespread species, Hydropsyche occidentalis and Hydropsyche oslari (92% of total Hydropsyche captured), were both predicted by water temperatures. However, we also found that the abundance of H. oslari decreased by as much as 10‐fold as diel stage change increased, despite the presence of female morphological adaptations for deep‐water oviposition. We found sexual dimorphism and evidence for deep‐water swimming adaptations in 5/6 species.
5. Our results show that net‐spinning caddisflies have species‐specific responses to environmental variation and suggest that environmental flows designed to reduce diel stage change and destabilise water temperatures may improve habitat quality for these ubiquitous and important aquatic insects.

     

Determining habitat quality for species that demonstrate dynamic habitat selection

Determining habitat quality for wildlife populations requires relating a species' habitat to its survival and reproduction. Within a season, species occurrence and density can be disconnected from measures of habitat quality when resources are highly seasonal, unpredictable over time, and patchy. Here we establish an explicit link among dynamic selection of changing resources, spatio‐temporal species distributions, and fitness for predictive abundance and occurrence models that are used for short‐term water management and long‐term restoration planning. We used the wading bird distribution and evaluation models (WADEM) that estimate (1) daily changes in selection across resource gradients, (2) landscape abundance of flocks and individuals, (3) conspecific foraging aggregation, and (4) resource unit occurrence (at fixed 400 m cells) to quantify habitat quality and its consequences on reproduction for wetland indicator species. We linked maximum annual numbers of nests detected across the study area and nesting success of Great Egrets (Ardea alba), White Ibises (Eudocimus albus), and Wood Storks (Mycteria americana) over a 20‐year period to estimated daily dynamics of food resources produced by WADEM over a 7490 km² area. For all species, increases in predicted species abundance in March and high abundance in April were strongly linked to breeding responses. Great Egret nesting effort and success were higher when birds also showed greater conspecific foraging aggregation. Synthesis and applications: This study provides the first empirical evidence that dynamic habitat selection processes and distributions of wading birds over environmental gradients are linked with reproductive measures over periods of decades. Further, predictor variables at a variety of temporal (daily‐multiannual) resolutions and spatial (400 m to regional) scales effectively explained variation in ecological processes that change habitat quality. The process used here allows managers to develop short‐ and long‐term conservation strategies that (1) consider flexible behavioral patterns and (2) are robust to environmental variation over time.     

Characterization of microsatellite loci in the Kaka,Nestor meridionalis

Eight microsatellite loci were characterized from the Kaka (Nestor meridionalis), a New Zealand parrot, using a polymerase chain reaction‐based isolation technique. Locus‐specific primers were used to genotype nine Kaka populations and tested on 25 other species of parrot. The number of alleles observed within Kaka ranged from one to 16 in the 12–126 individuals screened and two loci exhibited greater than 60% heterozygosity. Furthermore, these primers are likely to be useful in population‐level studies of two other New Zealand parrots.     

Factors influencing the abundance of parrots and hornbills in pristine and disturbed forests on New Britain, PNG

We estimated densities of parrot and hornbill species in primary and selectively logged forest and forest gardens at two lowland sites on New Britain, PNG. We related differences in abundance to food and nest-site availability in the different habitats and determined whether nest-site availability might limit local breeding populations. Blue-eyed Cockatoo Cacatua ophthalmica and Blyth's Hornbill Rhyticeros plicatus were usually rarer in forest gardens than in primary forest, but both fared well in logged forest. Eclectus Parrot Eclectus roratus was more common in all human-altered forests than in primary forest, and Eastern Black-capped Lory Lorius hypoinochrous was reasonably common throughout but extremely abundant in forest gardens at one site. Parrots and hornbills were recorded eating fruits of 15 tree species and flowers of nine species. Densities of these fruiting and flowering trees were highest in logged forest and forest gardens, respectively, indicating the importance of these anthropogenic habitats as feeding grounds for the assemblage. Active nest cavities were found in large individuals of 12 tree species. Densities of potential nest cavities were highest in primary forest and lowest in forest gardens. At both sites, estimates of potential nest-site density were significantly lower than estimates of the density of pairs of all species of parrots and hornbills: there may be 10–20 parrot/hornbill individuals per nest-hole. Continuing forest alteration, whilst further reducing nest-site availability, may allow large populations of parrots and hornbills to persist due to increased availability of food in some anthropogenic habitats. However, current abundance of such bird species may be a poor correlate of future extinction risk as long-lived taxa may remain common for some period even when annual recruitment has declined to critically low levels.     

A push‐pull integrated pest management scheme for preventing use of parrot nest boxes by invasive Africanized honey bees

Africanized honey bees (Apis mellifera scutellata) compete with endangered parrots for nest boxes and can hamper conservation efforts. We tested an integrated pest management push‐pull protocol in the Atlantic Forest in São Paulo, Brazil, in an effort to prevent bee swarms from colonizing nest boxes (N = 30 in the forest plus five in aviaries) meant for use by Vinaceous‐breasted Amazons (Amazona vinacea). Fifteen parrot nest boxes were treated with a permethrin insecticide to “push” scout bees away and each parrot box was paired with a bee trap box containing a pheromone lure to “pull” bees. Over a 1‐yr period (March 2013 to March 2014), 29 insect colonies moved into 18 of the 35 trap boxes. Nine Africanized honey bee, three native Jatai bee (Tetragonisca sp.), and 17 wasp colonies occupied trap boxes. Only one experimental push‐pull pair untreated parrot box was invaded by bees and no parrot boxes in aviaries were colonized. Four of the parrot nest boxes were occupied by birds during our study. Although none were used by Vinaceous‐breasted Amazons, Southern House Wrens (Troglodytes musculus), Green‐winged Saltators (Saltator similis), and Plain Parakeets (Brotogeris tirica) nested in the boxes and all nests were successful. Although long‐term studies are needed before drawing conclusions about the effectiveness of trap boxes, our results suggest that a push‐pull protocol may prove useful for reducing the use of nest boxes meant for parrots and other cavity‐nesting birds by Africanized honey bees and other insects.