Apoptosis in Plants

Apoptosis is a feature of animal cells that explains some aspects of programmed cell death in plants. Differences between plant and animal cell development require that concepts be reexamined to signify how plant cells have evolved the need for cell elimination in the meristematic growth habit, life cycle, and alternation of generations. Central to this theme is the regulation of divisional cycles for mitosis, meiosis, apomeiosis, and their related sexual and asexual reproductive processes. Apoptosis depends on the coordinated expression of genes regulating divisional cycles and apoptotic pathways so that irreversible nuclear and cytoplasmic elimination occurs. Cellular degradation products are salvaged to sustain adaptation, viability, structural function, and ontogeny. The cell wall is usually retained and further differentiated or eliminated. A model of factors predisposing apoptosis and comprising checkpoints in cell divisional cycles is presented for comparisons among plant and animal cells.     

INFLUENCE OF SUPPLEMENTAL INORGANIC NUTRIENTS ON GROWTH,SURVIVORSHIP, AND MYCORRHIZAL RELATIONSHIPS OF SCHIZACHYRIUM SCOPARIUM (POACEAE) GROWN IN FUMIGATED AND UNFUMIGATED SOIL

Little bluestem grass Schizachyrium scoparium ([Michx.] Nash) plants were grown under field conditions for 2 years in soils fumigated with methyl bromide and chloropicrin, or in unfumigated soil, and treated with supplemental inorganic nutrients (bases calcium and magnesium) phosphorus, nitrogen, and potassium. Most differences in measured plant responses were due to interactions between fumigation and nutrient treatments. These included biomass production, root mass per unit length (μg/cm), root lengths, flowering culm production, percent colonization, colonized root length, and spore production in rhizosphere soil. Plants generally responded to mycorrhizal fungal colonization by reducing total root length and producing thicker roots. Treatment of plants with bases appeared to profoundly affect the mycorrhizal association by reducing sporulation of vesicular-arbuscular mycorrhizal fungi and increasing colonization. When fumigated or unfumigated soils were considered separately, base-treated plants produced more biomass than other treatments. Base-treated plants grown on unfumigated soil had more flowering culms and longer colonized root lengths than all other plants. Percent colonization by mycorrhizal fungi and colonized root length were positively correlated with phosphorus/nitrogen ratios, but the ratio was not correlated with plant biomass production. This suggests that phosphorus is not a limiting nutrient in our soil and investment in a mycorrhizal association may not result in enhanced plant growth. The base-nutrient effects may indicate a need to reevaluate earlier studies of macro nutrient effects that did not take into account the role played by calcium and magnesium in assessing fungus-host plant interactions.     

A unifying new model of cytokinesis for the dividing plant and animal cells

Cytokinesis ensures proper partitioning of the nucleocytoplasmic contents into two daughter cells. It has generally been thought that cytokinesis is accomplished differently in animals and plants because of the differences in the preparatory phases, into the centrosomal or acentrosomal nature of the process, the presence or absence of rigid cell walls, and on the basis of 'outside-in' or 'inside-out' mechanism. However, this long-standing paradigm needs further reevaluation based on new findings. Recent advances reveal that plant cells, similarly to animal cells, possess astral microtubules that regulate the cell division plane. Furthermore, endocytosis has been found to be important for cytokinesis in animal and plant cells: vesicles containing endocytosed cargo provide material for the cell plate formation in plants and for closure of the midbody channel in animals. Thus, although the preparatory phases of the cell division process differ between plant and animal cells, the later phases show similarities. We unify these findings in a model that suggests a conserved mode of cytokinesis.     

Plant cells contain a novel member of the retinoblastoma family of growth regulatory proteins.

The product of the retinoblastoma susceptibility gene (Rb) controls the passage of mammalian cells through G1 phase. Animal virus oncoproteins interact with the Rb protein via an LXCXE motif and disrupt Rb-E2F complexes, driving cells into S-phase. Recently, we found that the RepA protein of a plant geminivirus contains an LXCXE motif that is essential for its function, a finding that predicts the existence of Rb-related proteins in plant cells. Here we report the isolation of a maize cDNA clone encoding a protein (ZmRb1) which, based on structural and functional studies, is closely related to the mammalian Rb family of growth regulatory proteins. ZmRb1 shows a high degree of amino acid conservation when compared with animal Rb members, particularly in the A/B 'pocket' domain, but ZmRb1 has a shorter N-terminal domain. ZmRb1 forms stable complexes with plant LXCXE-containing proteins, e.g. geminivirus RepA protein. Geminivirus DNA replication is reduced in plant cells transfected with plasmids encoding either ZmRb1 or human p130, a member of the Rb family. This suggests that ZmRb1 controls the G1/S transit in plant cells and is consistent with the fact that geminiviruses need an S-phase environment for DNA replication, as animal DNA tumor viruses do. Our results allow the extension of the Rb family of tumor suppressor proteins to plants and have implications on animal and plant strategies for cell growth control.     

Ultrastructure of autophagy in plant cells

Just as with yeasts and animal cells, plant cells show several types of autophagy. Microautophagy is the uptake of cellular constituents by the vacuolar membrane. Although microautophagy seems frequent in plants it is not yet fully proven to occur. Macroautophagy occurs farther away from the vacuole. In plants it is performed by autolysosomes, which are considerably different from the autophagosomes found in yeasts and animal cells, as in plants these organelles contain hydrolases from the onset of their formation. Another type of autophagy in plant cells (called mega-autophagy or mega-autolysis) is the massive degradation of the cell at the end of one type of programmed cell death (PCD). Furthermore, evidence has been found for autophagy during degradation of specific proteins, and during the internal degeneration of chloroplasts. This paper gives a brief overview of the present knowledge on the ultrastructure of autophagic processes in plants.     

ABCA1-dependent but apoA-I-independent cholesterol efflux mediated by fatty acid-bile acid conjugates (FABACs)

PCD (programmed cell death) in plants presents important morphological and biochemical differences compared with apoptosis in animal cells. This raises the question of whether PCD arose independently or from a common ancestor in plants and animals. In the present study we describe a cell-free system, using wheat grain nucellar cells undergoing PCD, to analyse nucleus dismantling, the final stage of PCD. We have identified a Ca2+/Mg2+ nuclease and a serine protease localized to the nucleus of dying nucellar cells. Nuclear extracts from nucellar cells undergoing PCD triggered DNA fragmentation and other apoptotic morphology in nuclei from different plant tissues. Inhibition of the serine protease did not affect DNA laddering. Furthermore, we show that the nuclear extracts from plant cells triggered DNA fragmentation and apoptotic morphology in nuclei from human cells. The inhibition of the nucleolytic activity with Zn2+ or EDTA blocked the morphological changes of the nucleus. Moreover, nuclear extracts from apoptotic human cells triggered DNA fragmentation and apoptotic morphology in nuclei from plant cells. These results show that degradation of the nucleus is morphologically and biochemically similar in plant and animal cells. The implication of this finding on the origin of PCD in plants and animals is discussed.     

Plant‐produced human growth hormone shows biological activity in a rat model

Plants have been shown to be efficient systems for expressing a wide range of recombinant proteins from various origins. Here, using a plant virus‐based expression vector to produce human growth hormone (hGH) in Nicotiana benthamiana plants, we demonstrate, for the first time, that the plant‐produced hGH (pphGH) is biologically active in a hypophysectomized rat model. We observed an average weight gain of ～17 g per animal in a group of 10 animals that were injected subcutaneously with pphGH with 60 μg/dose for 10 days. With the increasing demand for hGH, accompanied with the need to make this recombinant protein available to a wider population at a more reasonable cost, plants provide a feasible alternative to current production platforms. © 2009 American Institute of Chemical Engineers Biotechnol. Prog., 2009     

Development and use of a short-term nutrient-absorption technique for evaluating soil magnesium status

Summary A greenhouse investigation was undertaken to study and evaluate the use of a short-term nutrient-absorption technique for evaluating soil magnesium status. Barley (Hordeum vulgare), variety Arivat, was used as the test plant. The investigation included four experiments with the following objectives: (1) to determine the need for base applications of nitrogen and phosphorus in a soil-magnesium study using a short-term nutrient absorption technique; (2) to study the effect of base applications of N and P on Mg-uptake by plants under three time periods of root-soil contact; (3) to study the effect of increasing soil moisture from 75 to 100 per cent of the soil moisture equivalent on the plant uptake of Mg; and (4) to evaluate the short-term nutrient-absorption technique in determining the magnesium status in six different soils: Gila silt loam, Tours silty clay loam, Cajon clay loam, La Palma fine sandy loam, Yavapai sandy clay loam, and Casa Grande loam. Magnesium was applied in the form of MgSO₄ and Sul-PO-Mag.Plant growth, potassium, calcium, and magnesium uptake were increased by the base application of nitrogen and phosphorus using a 7-day period of root-soil contact.Plant growth was not affected by soil moisture level. Potassium and calcium concentrations in the plant were decreased with increasing soil moisture, but the total plant uptake of these nutrients was not affected. Total plant uptake and concentration of magnesium were increased by increasing soil moisture level.The results obtained in this study agree with previous observations that soil response to Mg does not depend upon the amount of exchangeable magnesium in the soil.Published as Arizona Agr. Expt. Station Technical Publication No.848.     

Role of magnesium in alleviation of aluminium toxicity in plants

Magnesium is pivotal for activating a large number of enzymes; hence, magnesium plays an important role in numerous physiological and biochemical processes affecting plant growth and development. Magnesium can also ameliorate aluminium phytotoxicity, but literature reports on the dynamics of magnesium homeostasis upon exposure to aluminium are rare. Herein existing knowledge on the magnesium transport mechanisms and homeostasis maintenance in plant cells is critically reviewed. Even though overexpression of magnesium transporters can alleviate aluminium toxicity in plants, the mechanisms governing such alleviation remain obscure. Possible magnesium-dependent mechanisms include (i) better carbon partitioning from shoots to roots; (ii) increased synthesis and exudation of organic acid anions; (iii) enhanced acid phosphatase activity; (iv) maintenance of proton-ATPase activity and cytoplasmic pH regulation; (v) protection against an aluminium-induced cytosolic calcium increase; and (vi) protection against reactive oxygen species. Future research should concentrate on assessing aluminium toxicity and tolerance in plants with overexpressed or antisense magnesium transporters to increase understanding of the aluminium-magnesium interaction.     

Characteristics of the organization of cell proliferation in plants in relation to the problem of stem cells

Cellular patterns of continual cell proliferation are considered in plants and animals. In plants, the cells, analogous to the animal stem cells, can be formed many times during plant ontogenesis. Their functioning as stem cells is determined by their position in the growing organ. This is the reason why a plant can grow for a very long time. There are some common features of cellular patterns of proliferation in plants and animals providing the stability and optimal subordination between cell proliferation, differentiation and function.     

Conservation of boundary extension mechanisms between plants and animals

Locomotion clearly sets plants and animals apart. However, recent studies in higher plants reveal cell-biological and molecular features similar to those observed at the leading edge of animal cells and suggest conservation of boundary extension mechanisms between motile animal cells and nonmotile plant cells.     

The Isolation and Properties of Oxalate Crystals from Plants

A method of isolation of crystalline inclusions of plant cellsis described. The crystals consist mainly of calcium oxalatein plants grown under normal conditions, but when calcium isreplaced by magnesium, barium, or strontium in the culture solutionthese elements substitute for calcium in the crystals; evenunder normal conditions magnesium occurs in the crystals tothe extent of about 2 per cent. The crystal morphology vanesin the species examined from raphides to complex conglomeratesand X-ray diffraction demonstrates an association of raphideswith calcium oxalate monohydrate whilst other solitary formsand conglomerates are associated with calcium oxalate 2.25H₂O.On this basis the species examined can be divided mto threegroups.     

Constitutive caspase-like machinery executes programmed cell death in plant cells

The morphological features of programmed cell death (PCD) and the molecular machinery involved in the death program in animal cells have been intensively studied. In plants, cell death has been widely observed in predictable patterns throughout differentiation processes and in defense responses. Several lines of evidence argue that plant PCD shares some characteristic features with animal PCD. However, the molecular components of the plant PCD machinery remain obscure. We have shown that plant cells undergo PCD by constitutively expressed molecular machinery upon induction with the fungal elicitor EIX or by staurosporine in the presence of cycloheximide. The permeable peptide caspase inhibitors, zVAD-fmk and zBocD-fmk, blocked PCD induced by EIX or staurosporine. Using labeled VAD-fmk, active caspase-like proteases were detected within intact cells and in cell extracts of the PCD-induced cells. These findings suggest that caspase-like proteases are responsible for the execution of PCD in plant cells.     

A role for haemoglobin in all plant roots?

Abstract. We have found haemoglobin in plant roots whereas previously it has been recorded only in nitrogen fixing nodules of plants. Haemoglobin occurs not only in the roots of those plants that are capable of nodulation but also in the roots of species that are not known to nodulate. We suggest that a haemoglobin gene may be a component of the genome of all plants. The gene structure and sequence in two unrelated families of plants suggests that the plant haemoglobins have had a single origin and that this origin relates to the haemoglobin gene of the animal kingdom. At present we cannot completely rule out the possibility of a horizontal transfer of the gene from the animal kingdom to a progenitor of the dicotyledonous angiosperms but we favour a single origin of the gene from a progenitor organism to both the plant and animal kingdoms. We speculate about the possible functions of haemoglobin in plant roots and put the case that it is unlikely to have a function in facilitating oxygen diffusion. We suggest that haemoglobin may act as a signal molecule indicating oxygen deficit and the consequent need to shift plant metabolism from an oxidative to a fermentative pathway of energy generation.     

Flavonoids as developmental regulators

Flavonoids, usually regarded as dispensable phytochemicals derived from plant secondary metabolism, play important roles in the biology of plants by affecting several developmental processes. Bioactive flavonoids also signal to microbes, serve as allelochemicals and are important nutraceuticals in the animal diet. Despite the significant progress made in identifying flavonoid pathway genes and regulators, little is currently known about the protein targets of flavonoids in plant or animal cells. Recently, there have been advances in our understanding of the roles that flavonoids play in developmental processes of plants. The multiple cellular roles of flavonoids can reflect their chemical diversity, or might suggest the existence of cellular targets shared between many of these seemingly disparate processes.     

Responses of nectar‐feeding birds to floral resources at multiple spatial scales

The responses of animal pollinators to the spatially heterogeneous distribution of floral resources are important for plant reproduction, especially in species‐rich plant communities. We explore how responses of pollinators to floral resources varied across multiple spatial scales and studied the responses of two nectarivorous bird species (Cape sugarbird Promerops cafer, orange‐breasted sunbird Anthobaphes violacea) to resource distributions provided by communities of co‐flowering Protea species (Proteaceae) in South African fynbos. We used highly resolved maps of about 125 000 Protea plants at 27 sites and estimated the seasonal dynamics of standing crop of nectar sugar for each plant to describe the spatiotemporal distribution of floral resources. We recorded avian population sizes and the rates of bird visits to > 1300 focal plants to assess the responses of nectarivorous birds to floral resources at different spatial scales. The population sizes of the two bird species responded positively to the amount of sugar resources at the site scale. Within sites, the effects of floral resources on pollinator visits to plants varied across scales and depended on the resources provided by individual plants. At large scales (radii > 25 m around focal plants), high sugar density decreased per‐plant visitation rates, i.e. plants competed for animal pollinators. At small scales (radii < 5 m around focal plants), we observed either competition or facilitation for pollinators between plants, depending on the sugar amount offered by individual focal plants. In plants with copious sugar, per‐plant visitation rates increased with increasing local sugar density, but visitation rates decreased in plants with little sugar. Our study underlines the importance of scale‐dependent responses of pollinators to floral resources and reveals that pollinators’ responses depend on the interplay between individual floral resources and local resource neighbourhood.     

What happened to plant caspases?

The extent of conservation in the programmed cell death pathways that are activated in species belonging to different kingdoms is not clear. Caspases are key components of animal apoptosis; caspase activities are detected in both animal and plant cells. Yet, while animals have caspase genes, plants do not have orthologous sequences in their genomes. It is 10 years since the first caspase activity was reported in plants, and there are now at least eight caspase activities that have been measured in plant extracts using caspase substrates. Various caspase inhibitors can block many forms of plant programmed cell death, suggesting that caspase-like activities are required for completion of the process. Since plant metacaspases do not have caspase activities, a major challenge is to identify the plant proteases that are responsible for the caspase-like activities and to understand how they relate, if at all, to animal caspases. The protease vacuolar processing enzyme, a legumain, is responsible for the cleavage of caspase-1 synthetic substrate in plant extracts. Saspase, a serine protease, cleaves caspase-8 and some caspase-6 synthetic substrates. Possible scenarios that could explain why plants have caspase activities without caspases are discussed.     

Current and Future Transgenic Whole-Cell Biosensors for Plant Macro- and Micronutrients

From the soil, plants take up macronutrients (calcium, magnesium, nitrogen, phosphorus, potassium, sulfur) and micronutrients (boron, chloride, cobalt, copper, iron, manganese, molybdenum, nickel, selenium, and zinc). In acidic soils, aluminum can interfere with nutrient uptake. There is a need for improved diagnostic tests for these soil-derived minerals that are inexpensive and sensitive, provide spatial and temporal information in plants and soil, and report bioavailable nutrient pools. A transgenic whole-cell biosensor detects a stimulus inside or outside a cell and causes a change in expression of a visible reporter such as green fluorescent protein, and thus can convert an invisible plant nutrient into a visible signal. Common transgenic whole-cell biosensors consist of promoter-reporter fusions, auxotrophs for target analytes that are transformed with constitutively expressed reporters, riboswitches and reporters based on Forster Resonance Energy Transfer (FRET). Here, we review transgenic plant biosensors that have been used to detect macronutrients and micronutrients. As plant-based biosensors are limited by the requirement to introduce and optimize a transgene in every genotype of interest, we also review microbial biosensor cells that have been used to measure plant or soil nutrients by co-inoculation with their respective extracts. Additionally, we review published transgenic whole-cell biosensors from other disciplines that have the potential to measure plant nutrients, with the goal of stimulating the development of these diagnostic technologies. We discuss current limitations and future improvements needed, and the long-term potential of transgenic whole-cell biosensors to inform plant physiology, improve soil nutrient management, and assist in breeding crops with improved nutrient use efficiency.     

Aesthetic damage thresholds for twospotted spider mites (Acari: Tetranychidae) on impatiens: effect of plant age and level of infestation

The effects of plant age and infestation level of twospotted spider mite, Tetranychus urticae Koch (Acari: Tetranychidae), on visible plant damage, and the effect of plant age on spider mite population growth on impatiens, Impatiens wallerana Hook.f. (Ericales: Balsaminaceae), were determined by inoculating impatiens plants of three different ages with two densities of spider mites. Each plant was inoculated with either one adult female mite per three leaves or six leaves based on the average number of leaves on plants of each of the three age classes. Subsequently, leaf damage was correlated with mite-days (cumulative spider mite density) per leaf. The results showed that older aged plants exhibited greater damage than younger plants. Regression models of damage thresholds for each plant age suggest that monitoring for spider mites must be done periodically throughout the entire plant production cycle, but that more attention should be given toward the end of the cycle. Measurements of visible leaf damage were correlated with plant marketability. Specifically, the level of damage (proportion of damaged leaves per plant) at which plant marketability changes from a "premium" to a "discounted" category was 0.04-0.06. Thus, regression equations of the damage threshold could be used to estimate a cumulative spider mite density or mite-days equivalent to the economic threshold. Based on these equations, 5% leaf damage corresponds to 2.1, 1.51, and 1.25 mite-days for youngest, intermediate, and oldest plants, respectively. Because the damage threshold on impatiens was shown to be very low, the action threshold for biological control is essentially zero, and predators would need to be released as soon as damage is observed.     

A selection strategy in plant transformation based on antisense oligodeoxynucleotide inhibition

Antisense oligodeoxynucleotide (asODN) inhibition was developed in the 1970s, and since then has been widely used in animal research. However, in plant biology, the method has had limited application because plant cell walls significantly block efficient uptake of asODN to plant cells. Recently, we have found that asODN uptake is enhanced in a sugar solution. The method has promise for many applications, such as a rapid alternative to time‐consuming transgenic studies, and high potential for studying gene functionality in intact plants and multiple plant species, with particular advantages in evaluating the roles of multiple gene family members. Generation of transgenic plants relies on the ability to select transformed cells. This screening process is based on co‐introduction of marker genes into the plant cell together with a gene of interest. Currently, the most common marker genes are those that confer antibiotic or herbicide resistance. The possibility that traits introduced by selectable marker genes in transgenic field crops may be transferred horizontally is of major public concern. Marker genes that increase use of antibiotics and herbicides may increase development of antibiotic‐resistant bacterial strains or contribute to weed resistance. Here, we describe a method for selection of transformed plant cells based on asODN inhibition. The method enables selective and high‐throughput screening for transformed cells without conferring new traits or functions to the transgenic plants. Due to their high binding specificity, asODNs may also find applications as plant‐specific DNA herbicides.