Advances in understanding the impacts of global warming on marine fishes farmed offshore: Sparus aurata as a case study

Monitoring variations in proteins involved in metabolic processes, oxidative stress responses, cell signalling and protein homeostasis is a powerful tool for developing hypotheses of how environmental variations affect marine organisms' physiology and biology. According to the oxygen- and capacity-limited thermal tolerance hypothesis, thermal acclimation mechanisms such as adjusting the activities of enzymes of intermediary metabolism and of antioxidant defence mechanisms, inducing heat shock proteins (Hsps) or activating mitogen-activated protein kinases may all shift tolerance windows. Few studies have, however, investigated the molecular, biochemical and organismal responses by fishes to seasonal temperature variations in the field to link these to laboratory findings. Investigation of the impacts of global warming on fishes farmed offsore, in the open sea, can provide a stepping stone towards understanding effects on wild populations because they experience similar environmental fluctuations. Over the last 30 years, farming of the gilthead sea bream Sparus aurata (Linnaeus 1758) has become widespread along the Mediterranean coastline, rendering this species a useful case study. Based on available information, the prevailing seasonal temperature variations expose the species to the upper and lower limits of its thermal range. Evidence for this includes oxygen restriction, reduced feeding, reduced responsiveness to environmental stimuli, plus a range of molecular and biochemical indicators that change across the thermal range. Additionally, close relationships between biochemical pathways and seasonal patterns of metabolism indicate a connection between energy demand and metabolic processes on the one hand, and cellular stress responses such as oxidative stress, inflammation and autophagy on the other. Understanding physiological responses to temperature fluctuations in fishes farmed offshore can provide crucial background information for the conservation and successful management of aquaculture resources in the face of global change.     

Reproductive strategies of Amazonian stream fishes and their fine‐scale use of habitat are ordered along a hydrological gradient

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Population Dynamics and Spatial Distribution of Coral Reef Fishes: Comparison Between Continuous and Isolated Habitats

Recent studies have shown that there are high degrees of spatial and temporal stability in coral reef fish assemblage structures in a continuous habitat, in contrast to results of observations in isolated habitats. In order to determine the reason for the difference in temporal stability of fish assemblage structures in a continuous habitat site and an isolated habitat site, population dynamics and spatial distributions of coral reef fishes (six species of pomacentrids and two species of apogonids) in the two habitat site were investigated over a 2-year period in an Okinawan coral reef. The population densities of pomacentrid and apogonid species increased in juvenile settlement periods at both sites, but the magnitude of seasonal fluctuation in population density was significantly greater at the isolated habitat site, indicating that the rate of juvenile settlement and mortality rate in the isolated habitat were greater than those in the continuous habitat. The magnitude of aggregation of fishes, which affects density-dependent biological interactions that modify population density such as competition and predation, was also significantly greater at the isolated habitat site, especially in the juvenile settlement season. Most of the fishes at the isolated habitat site exhibited more generalized patterns of microhabitat selection because of less coral coverage and diversity. The seasonal stability in the species composition of fishes was greater at the continuous habitat site than that at the isolated habitat. Our findings suggest that the relative importance of various ecological factors responsible for regulation of the population density of coral reef fishes (e.g., competition, predation, microhabitat selection and post-settlement movement) in a continuous habitat site and the isolated habitat site are different.     

Temporal patterns in a fish assemblage of a semiarid mangrove zone in Madagascar

Gillnet sampling was conducted for a year in a tropical mangrove creek (SW Madagascar), characterized by a limited freshwater influence, a high turbidity and a tidal range up to 3 m. Sixty species of juvenile fishes were caught, 44 species being of commercial interest. Catches were dominated by Gerreidae (27% of total abundance), Teraponidae (16%), Carangidae (13%) and Sparidae (12%). The temporary resident fishes in the mangrove zone represented 50% of the species and 97% of the total abundance, the other species being rare (less than five individuals). The species richness, abundance and biomass per netting were low in the middle of the cool season (July-August). Monthly changes in the fish assemblage were particularly complex, with three species groups displaying a clear seasonal pattern, some species succeeding one another in a rather unstructured way, and three species abundant throughout the year. There was no clear structuring effect of temperature, salinity and turbidity on the fish assemblage. However, tidal, lunar and diel effects on the composition of the fish assemblage were evident. The species overlap between the Sarodrano mangrove fauna and the adjacent coral reef fauna is particularly weak with six species in common and shows that the mangrove plays only a very limited nursery role for coral reef species.     

Contributions of winter foraging to the annual growth of thermally dissimilar fish species

The seasonal energy dynamics of temperate fishes will likely be affected by climate change, especially during the winter. Few studies, however, have focused on winter. Fishes are more active in winter than previously thought, thus, an inquiry into the energetic contributions of winter foraging to the annual growth of fishes is needed given expected changes in winter conditions. We used stomach content data, total lipid analyses, and bioenergetics modeling to assess the effects of winter foraging on three species in Lake Champlain, Vermont, USA. We compared species in two thermal guilds, the cool-water species yellow perch (Perca flavescens) and two warm-water species, pumpkinseed (Lepomis gibbosus) and bluegill (Lepomis macrochirus). Our results indicate that winter energy dynamics likely depend on the thermal preference of individual fish species – the cool-water species foraged in all seasons whereas the two warm-water species foraged only in the open-water seasons. In addition, winter foraging provided sufficient energy for overwinter growth in cool-water species but not in warm-water species. Climate change will affect the seasonal energy dynamics that these species have evolved to survive winter conditions in temperate lakes. Thus, we expect climate change to affect individual survival and reproductive success.

     

1980—2007年大亚湾鱼类物种多样性、区系特征和数量变化

根据2004—2005年大亚湾海域底拖网鱼类调查数据,并结合1980—2007年的历史资料,分析了该海域鱼类的种类组成、区系特征、多样性、优势种和数量变化趋势.结果表明： 2004—2005年,大亚湾海域共记录鱼类107种,分属13目50科,以中下层鱼类的种类最多,为48种,其次是中上层和底层种类,分别为37种和21种.大亚湾鱼类区系具热带和亚热带特性,以暖水性种类占绝对优势,为97种,暖温性种类为10种.多样性指数以夏季最高（3.82）,其次是冬季（3.37）和秋季（3.00）,春季最低（2.40）.Pielou均匀度指数的季节变化情况与多样性指数相似.1980—2007年大亚湾海域鱼类群落特征发生了明显的变化：鱼类种类数减少,优势种更替明显.鱼类种类数由1980年的157种减少至1990年的110种,2004—2005年继续减少至107种;鱼类优势种由1980年以带鱼和银鲳等优质鱼为主,更替为以小型和低值的小沙丁鱼、小公鱼和二长棘鲷幼鱼为主.用包含年际变化趋势和季节性周期变化的回归模型模拟1980—2007大亚湾鱼类资源密度的变化,鱼类资源密度在1980—1999年和1990—2007年两个时期均呈下降趋势,但1990—2007年间下降幅度比1980—1999年间大;1980—1999年鱼类资源密度的季节波动幅度较平缓（振幅为0.099）,而1990—2007年的季节波动较大（振幅为0.420）,说明1990—2007年阶段大亚湾鱼类数量的季节变化更为显著.     

Coping with the cold: energy storage strategies for surviving winter in freshwater fish

For many ectothermic animals, the acquisition, storage and depletion of lipids is integral to successfully coping with reduced metabolic rates and activity levels associated with cold, winter periods. In fish, lipids are crucial for overwinter survival and successful reproduction. The timing and magnitude of seasonal lipid storage should therefore vary predictably among fish with different thermal preferences and spawn times. Small‐ and large‐bodied fish should also face different constraints associated with season that influence lipid cycling. However, much work to date has been species‐ and location‐specific and a general conceptual model for the seasonal energy budgets of freshwater fish is lacking. Here, we conducted a comprehensive literature review of seasonal lipid levels in freshwater fishes. We predicted that warm and cool water species would be more likely to demonstrate peak lipid levels during warm months than cold water species, and expected a larger magnitude of annual lipid cycling in warm and cool water compared to cold water fish. We also expected dampened lipid cycling in larger fish due to their lower mass‐specific metabolic rates. Observed patterns in the timing and magnitude of lipid storage contradicted our prediction because lipid cycling was widespread across species, despite thermal guild, with peak lipid levels commonly occurring during warmer months, even in cold water fish. For body size effects, larger bodied fish species had dampened seasonal lipid cycling, as predicted. We developed a conceptual framework describing how the ‘scope’ for variation in annual lipid cycling changes with body size both among and within species in order to guide future work. Together, our findings suggest that energy acquired during warm months is broadly important for overwinter survival and reproduction in fishes, and provide a new perspective on the differential constraints and physiological responses to seasonality among freshwater fish. Improving our understanding of these dynamics is especially pressing given that a changing global climate is anticipated to alter existing seasonal signals.     

Ecophysiological patterns of distribution and behavior of freshwater fish in thermal gradients

Species-specific, intraspecific, age-related, seasonal, diel, physiological, and behavioral aspects of the distribution of freshwater fishes along experimental and natural thermal gradients are analyzed. It is shown that thermal selection response is displayed by all fish species. The thermal selection process includes two stages: the choice of the current selected temperature, which reflects the acclimation process, and the choice of the final selected temperature, which follows the stabilization of thermal selection. Thermoregulation behavior is an inherent reaction and can be placed among the most shared and earliest adaptations of aquatic animals. The final selected temperature of fishes reflects the ecophysiological optimum of the existence of the species, and the upper lethal temperature reflects the limit of potential existence.     

Cryptic vicariance in Gulf of California fishes parallels vicariant patterns found in Baja California mammals and reptiles

Comparisons across multiple taxa can often clarify the histories of biogeographic regions. In particular, historic barriers to movement should have affected multiple species and, thus, result in a pattern of concordant intraspecific genetic divisions among species. A striking example of such comparative phylogeography is the recent observation that populations of many small mammals and reptiles living on the Baja California peninsula have a large genetic break between northern and southern peninsular populations. In the present study, I demonstrate that five species of near-shore fishes living on the Baja coastline of the Gulf of California share this genetic pattern. The simplest explanation for this concordant genetic division within both terrestrial and marine vertebrates is that the Baja Peninsula was fragmented by a Plio-Pleistocene marine seaway and that this seaway posed a substantial barrier to movement for near-shore fishes. For some fish species, the signal of this vicariance in mtDNA has been eroded by gene flow and is not evident with classic, equilibrium measures of population structure. Yet, significant divisions are apparent in coalescent analyses that jointly estimate divergence with gene flow. The genetic divisions within Gulf of California fishes also coincide with recognized biogeographic regions based on fish community composition and several environmental factors. It is likely that adaptation to regional environments and present-day oceanographic circulation limit gene exchange between biogeographic regions and help maintain evidence of past vicariance.     

Community structure of fishes attracted to shallow water fish aggregation devices off South Carolina,U.S.A.

Synopsis Twenty-two fish aggregation devices were deployed in 14 m of water off South Carolina. Species composition and abundance were determined by diver visual census on eight occasions from May through November, 1985. A total of 21 families and 36 species of fishes was observed at 121 stations. Pelagic fishes dominated the fauna with a 99.3% relative abundance, and Decapterus punctatus accounted for 97.6% of the individuals. Caranx crysos, Diplectrum formosum, Decapterus punctatus, Centropristis striata and Monacanthus hispidus were the most frequent species. Total fish abundance, number of species and abundance of four of the six most common species were significantly affected by season. Hurricane activity may have caused a significant drop in pelagic fish abundance at the FADs in July. No significant correlations among species abundances were found after removal of season and FAD type effects. Spatial zonation and seasonal occurrence patterns suggest some competition among pelagic fishes. Several factors that regulate FAD faunal abundance and composition are hypothesized, including: juvenile fish availability, availability of shelter, availability of adequate food resources, interspecific and intraspecific competition, severe sea conditions, and sporadic intrusions of large predatory fishes. It is hypothesized that the abundances of benthic and pelagic FAD fishes are correlated and that there is a direct or indirect energetic link between shallow water pelagic and benthic fish assemblages near FADs.     

Adaptive plasticity in wing melanisation of a montane butterfly across a Himalayan elevational gradient

1. Traits that are significant to the thermal ecology of temperate or montane species are expected to prominently co-vary with the thermal environment experienced by an organism. The Himalayan Pieris canidia butterfly exhibits considerable variation in wing melanisation. We investigated: (i) whether variation in wing melanisation and (ii) activity period of this montane butterfly was influenced by the seasonally and elevationally changing thermal landscape.
2. We discovered that wing melanisation varied across elevation, seasons, sex, and wing surfaces, with the variation strongly structured in space and time: colder seasons and higher elevations produced more melanic individuals. Notably, melanisation did not vary uniformly across all wing surfaces: (i) melanisation of the ventral hindwing co-varied much more prominently with elevation, but (ii) melanisation on all other surfaces varied with seasonal changes in the thermal environment.
3. Observed wing surface-specific patterns indicated thermoregulatory function for this variation in melanisation. Such wing surface-specific responses to seasonal and elevational variation in temperature have rarely been reported in montane insects.
4. Moreover, daily and seasonal thermal cycles were found to strongly influence activity periods of this species, suggesting the potential limits to wing melanisation plasticity.
5. Overall, these results showed that the seasonal and elevational gradients in temperature influence the thermal phenotype as well as activity periods of this Himalayan butterfly. It will be critical to study the phenotypic evolution of such montane insects in response to the ongoing climate change, which is already showing significant signs in this iconic mountain range.

     

Identifying indicators and quantifying large-scale effects of dams on fishes

Although localized effects of individual dams on stream fish assemblages have been relatively well-studied, less is known about the effects of multiple dams within a stream network on fishes and the patterns that emerge when the combined effects of individual and multiple dams are viewed across entire river basins, ecoregions, and states. This study evaluated multiple stream network fragmentation metrics representing localized (e.g., distance-to-dams) and cumulative (e.g., total upstream reservoir storage) dam influences on streams in Michigan, Wisconsin, and Minnesota, developing an approach for identifying suitable fish indicators of dam effects. We used change point and correlation analyses to determine associations of stream fish catch per unit effort and various stream network fragmentation metrics with data from more than 2000 fish survey sites stratified by stream size, thermal regime, and ecoregion. Of the identified indicator species, predominantly warmwater, large river, and/or lentic species were positively associated with stream network fragmentation, whereas cold and coolwater lotic species were negatively associated with fragmentation. These results suggest a combination of downstream thermal effects and upstream influences from impoundments generated by dams. Variance partitioning analyses based on identified indicator species revealed greater upstream-dominated dam influences in headwaters than mid-sized streams, and a greater relative influence of dams vs. other non-dam anthropogenic influences in cold streams than warm streams. Overall, a combination of localized and cumulative fragmentation metrics, as well as upstream and downstream-oriented measures, were influential in indicator species responses, emphasizing the importance of selecting a diversity of fragmentation metrics when assessing effects of dams on stream fishes. Understanding multiple dam influences on stream fishes, including localized effects from individual dams and cumulative effects from all dams within a river basin, would provide useful information for a variety of management activities, including dam operation and dam removal prioritization. Dams significantly affect conservation and management options for stream fishes, with identification of multi-scale dam influences on fishes being critical to restoration and maintenance of aquatic biodiversity throughout the world.     

泉州湾海域鱼类多样性及营养级变化

利用2008年5月和10月在泉州湾进行的拖网渔业资源调查资料, 探讨了该海域鱼类群落结构和物种多样性特征。结果表明, 两次拖网调查共鉴定鱼类54种, 隶属于2纲13目32科。其中中上层鱼类12种, 近底层鱼类19种, 底层鱼类23种; 暖水性鱼类40种, 暖温性鱼类14种, 未发现冷温性和冷水性种类; 杂食性鱼类4种, 低级肉食性鱼类37种, 中级肉食性鱼类8种, 高级肉食性鱼类5种。白姑鱼(Argyrosomus argentatus)和叫姑鱼(Johnius belengerii)是5月份最主要的优势种, 凤鲚(Coilia mystus)和龙头鱼(Harpodon nehereus)是10月份最主要的优势种。与1985年的调查资料相比, 泉州湾鱼类组成和优势种发生了很大的变化, 多样性指数由3.05下降到2.32, 均匀度指数由0.76下降到0.58, 营养级指数由2.79下降到2.54。泉州湾鱼类多样性下降的主要原因可能是过度捕捞、水域污染和栖息地丧失等。     

An ecological and economic review of meiofauna as food for fish*

After briefly reviewing the evidence that meiofauna are an integral part of the complex food web of invertebrate infaunal and epifaunal organisms, it is shown that, at least in intertidal and shallow subtidal habitats, meiofauna are an important food for the small (30–60 mm) juveniles of some commercially important fishes (flatfish and salmonids) or for fish which are themselves food for commercial species. The evidence that fish feed preferentially on a few species of harpacticoid copepod rather than on the numerically dominant meiofaunal taxa is presented and discussed. It is argued that, in addition to benthic copepods being energetically efficient as food for fishes, it is differences in the activity and availability between major taxa of meiofauna as they relate to the feeding strategies of the fish which go a long way to explaining this apparent general preference of fish for harpacticoid copepods rather than nematodes. From literature estimates of consumption rates, it is concluded that the supply of meiofaunal food to juvenile fish is unlikely to be limiting although this may not be the case in some shallow subtidal muddy sand habitats. Whilst it is recognized that fish predation may influence the magnitude of the seasonal peaks in numbers, predation is not the principal cause of seasonal fluctuations in harpacticoid copepod species abundances. The effects of predation on other aspects of community structure is unknown. Finally, the possible role of meiofauna in mariculture systems is briefly discussed.     

Direct and indirect effects of predatory young‐of‐year fishes in a dryland river food web

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Effects of turbidity on life history parameters of two species of Daphnia

SUMMARY. 1. Life table experiments were carried out in a range of turbidities on D. pulex , representing a 'clear-water', and on D. barbata , representing a 'turbid-water' species.
2. In contrast to predictions based on seasonal occurrence patterns, D. pulex had a higher intrinsic rate of increase ( r _c)s over most of the turbidity range than D. barbata. Consistent differences in life history between the two species were found, but life history characteristics were rather insensitive to turbidity levels. Although turbidity per se appears to have little direct effect on life history parameters, it could influence the seasonal succession of these two species by interacting with other factors.
3. It is suggested that visual predation by fish rather than turbidity per se probably influenced the seasonality of Daphnia species. During the warmer months, selective removal of D. pulex by visually foraging fishes may allow D. barbata to gain dominance. Effects of temperature and nutrition also merit further study.     

Parasitism by isopods in sandy beach fish assemblages: role of urbanization and environmental characteristics

Parasitism by isopods is a common phenomenon in marine fishes and may induce negative effects, especially in juvenile stages. The surf-zones of sandy beaches are an important nursery habitat for many fish species, including commercially important ones, and are structured by beach characteristics and human activities, which are suggested to influence the fishes’ susceptibility to parasitism. Here, we analyze the early infestation and prevalence of parasitism in surf zones fishes of 27 beaches in southeastern Brazil with different characteristics. Parasites were recorded in only seven of the beaches. A high infestation was found in a single site, the highly urbanized Itaguá beach, where the prevalence of parasitism on juveniles and early adults of the Atlantic anchoveta Cetengraulis edentulus was high (68.11%). Four species of parasitic isopods were found, all belonging to the Cymothoidae family, but Livoneca desterroensis was the most abundant (78.7%). No effects of parasitism were detected on the size, weight and physiological condition of fishes, but presence of parasites and prevalence of infestation were positively affected by urbanization. Overall, our results indicate that the surf-zones have low parasite infestation, yet, they suggest that anthropic effects such as urbanization may enhance the prevalence of isopod parasitism.

     

Unravelling the taxonomy and identification of a problematic group of benthic fishes from tropical rivers (Gobiidae: Glossogobius)

Flathead gobies (genus Glossogobius) include c. 40 small- to medium-sized benthic fishes found primarily in freshwater habitats across the Indo-Pacific, having biodiversity value as well as cultural and economic value as food fishes, especially in developing countries. To help resolve considerable confusion regarding the identification of some of the larger-growing Glossogobius species, a systematic framework was established using nuclear genetic markers, mitochondrial DNA barcoding and phenotypic evidence for a geographically widespread collection of individuals from the waterways of tropical northern Australia. Species boundaries and distribution patterns were discordant with those previously reported, most notably for the tank goby Glossogobius giuris, which included a cryptic species. Genetic divergence was matched with accompanying unique visual characters that aid field identification. Additional taxonomic complexity was also evident, by comparison with DNA barcodes from international locations, suggesting that the specific names applicable for two of the candidate species in Australia remain unresolved due to confusion surrounding type specimens. Although flathead gobies are assumed to be widespread and common, this study demonstrates that unrealised taxonomic and ecological complexity is evident, and this will influence assessments of tropical biodiversity and species conservation. This study supports the need for taxonomic studies of freshwater fishes to underpin management in areas subject to significant environmental change.     

珠江口伶仃洋海域底层游泳动物的季节变化

珠江口伶仃洋海域是渔业资源的重要栖息地,近年来由于人类活动的加剧导致生态环境质量下降。为进一步了解栖息环境恶化对渔业资源的影响,于2009年8月至2010年4月采用底拖网在珠江口伶仃洋海域进行了游泳动物4个季节的调查。共鉴定游泳动物92种,其中鱼类54种,甲壳类32种和头足类6种。游泳动物种数夏季最高,为52种,春季最低,仅35种,春、夏季和冬、春季种类季节更替显著。优势种组成较为稳定,以日本蟳(Charybdis japonica)、黑斑口虾蛄(Oratosquilla kempi)和棘头梅童鱼(Collichthys lucidus)为主要优势种,其中日本蟳为全年优势种,平均尾数密度占总密度的8.07%～26.22%。游泳动物资源密度和尾数密度季节变化趋势一致,均为夏季最高,秋季和春季次之,冬季最低。珠江口伶仃洋海域温度和盐度有明显的季节变化,夏季和秋季温度较高,盐度较低,冬季和春季温度较低,而盐度较高。温度是伶仃洋海域游泳动物种类和数量季节变化的主要因子。与历史资料比较,珠江口主要经济鱼、虾类出现小型化趋势。     

Size,sex and social experience: Experimental tests of multiple factors mediating contest behaviour in a rockpool fish

Aggressive contests amongst conspecifics are important to understand from an ecological and evolutionary perspective as contest dynamics can directly influence individual fitness. For some species, individual attributes such as relative body size closely predict the outcome, intensity and duration of contests, whereas for others, prior social experiences play a key role. However, disentangling the relative effects of individual attributes and social experiences is challenging from an experimental perspective, and because of this, few studies have investigated relative effects of multiple factors. Rockpool fishes have been well studied in terms of factors governing abundance, distribution and community structure, but much less so in terms of contest behaviour. This is surprising because contest dynamics are likely to directly affect the distribution of fishes along the rocky shore, and hence indirectly govern population and community composition. Here, we explored multiple factors potentially influencing contest behaviour in a numerically dominant, resident intertidal fish species, Bathygobius cocosensis (Gobiidae). Using a series of staged pairwise contest trials, we investigated the effect of size, sex and social experiences (namely prior residency and winner–loser experiences) on contest dynamics. We found no evidence that prior residency influenced contest outcome, suggesting social experiences play a minor role in contest dynamics. Previous winner/loser experience also did not influence contest outcome, although this is likely a product of low sample size. In addition, the likelihood of winning was unrelated to contestant sex, and the combination of sexes in paired contests did not influence contest intensity or duration. Instead, body size was related to contest outcome, intensity and duration in the majority of experimental trials. These results suggest that body size rather than sex or social experiences is the key determinant of contest dynamics in this species. We suggest that the dynamic biotic and abiotic environment inhabited by intertidal fish may reduce the influence of prior social experiences in modulating contest dynamics.