Bacillus volatiles antagonize cyanobacteria

Abstract Vegetative cells of Dictyostelium discoideum were synchronized by a size selection method which gave good synchrony without indication of any respiratory perturbation or abnormal cellular appearance. During synchronous growth, fluctuations in respiratory activity and in total cellular protein content were consistently observed (14 experiments). Control cultures in which the entire exponential population was selected for under identical centrifugation conditions employed to produce the synchronous cultures did not show this pattern; neither did cells subjected to anaerobiosis, cold shock or centrifugation, which were performed to induce perturbation. It appears that extensive turnover of cellular proteins accompanied by respiratory fluctuations occur in the absence of perturbation during vegetative growth of Dictyostelium discoideum . This picture may represent the changes occurring in single cells which would not be evident in time-averaged observations of exponential cultures.     

Cold shock and fish

Rapid decreases in water temperature may result in a number of physiological, behavioural and fitness consequences for fishes termed ‘cold shock’. Cold‐shock stress occurs when a fish has been acclimated to a specific water temperature or range of temperatures and is subsequently exposed to a rapid decrease in temperature, resulting in a cascade of physiological and behavioural responses and, in some cases, death. Rapid temperature decreases may occur from either natural (e.g. thermocline temperature variation, seiches and storm events) or anthropogenic sources (e.g. varied thermal effluents from power generation and production industries). The magnitude, duration and frequency of the temperature change as well as the initial acclimation temperatures of individuals can influence the extent of the consequences of cold shock on fishes. Early research on cold shock focused on documenting mortality events associated with cold shock. However, in recent years, a shift in research has occurred where the focus of cold‐shock studies now involves characterizing the sublethal effects of cold shock in terms of the stress response in fishes. This shift has revealed that cold shock can actually be used as a tool for fisheries science (e.g. to induce polyploidy). The cold‐shock stress response offers opportunities to develop many exciting research questions, yet to date, cold‐shock research has been largely unfocused. Few studies attempt to link laboratory physiology experiments with ecologically relevant field data on behaviour, growth, bioenergetics and fitness. Additional research will allow for the development of more focused and robust management policies and conservation initiatives. This review synthesizes the sublethal physiological and behavioural consequences of cold‐shock stress on fishes, identifies natural and anthropogenic sources of cold shock, discusses the benefits of cold shock to fisheries science and describes mitigation and management efforts. Existing knowledge gaps and opportunities for future cold‐shock research are presented.     

Expression of a New Cold Shock Protein of 21.5 kDa and of the Major Cold Shock Protein by Streptococcus thermophilus After Cold Shock

Streptococcus thermophilus is widely used in food fermentations; it commonly suffers diverse stress challenges during manufacturing. This study investigated the cold shock response of S. thermophilus when the cell culture temperature shifted from 42°C to 15°C or 20°C. The growth of cells was affected more drastically after cold shock at 15°C than at 20°C. The generation time was increased by a factor of 19 when the temperature was lowered from 42° to 20°C, and by a factor of 72 after a cold shock at 15°C. The two-dimensional electrophoretic protein patterns of S. thermophilus under cold shock conditions were compared with the reference protein pattern when cells were grown at optimal temperature. Two proteins of 21.5 and 7.5 kDa synthesized in response to cold shock were characterized. N-terminal sequencing and sequence homology searches have shown that the 7.5-kDa protein belonged to the family of the major cold shock proteins, while no homology was found for the new cold shock protein of 21.5 kDa. Received: 4 June 1999 / Accepted: 6 July 1999     

Requirement of messenger RNA synthesis for the first division in heat synchronized Tetrahymena

When Tetrahymena are starved during the heat synchronization treatment, they synthesize a small amount of transfer RNA and DNA-like RNA containing poly A, but no ribosomal RNA and still retain the capacity to divide synchronously. Analysis with MAK chromatography revealed that the DNA-like RNA is eluted almost entirely as tenaciously bound, DNA-like RNA. SDS-sucrose gradient centrifugation revealed that the DNA-like RNA is heterogeneous in size with a dominant peak sedimenting at about 17S. The peak fraction containing poly A sediments at about 15S.A good correlation has been established between the percentage of cell division and the synthesis of either tenaciously bound, DNA-like RNA or RNase-resistant RNA using various concentrations of actinomycin D. Actinomycin D treatment causes little delay in the initiation of furrowing in division but prolongs the furrowing process. In the present system, the critical addition time with actinomycin D (50 μg/ml) is about 30 min after the end of the last heat shock (EH).The present data suggest that the synthesis of messenger-like RNA containing poly A is required after the last heat shock (approx. 30–40 min after EH) for the first division in heat synchronized Tetrahymena. This RNA synthesis appears to be related to the furrowing process.     

Induction of cold shock proteins in Bacillus subtilis

The cold shock response in the Gram-positive soil bacterium Bacillus subtilis is described. Cells were exposed to sudden decreases in temperature from their optimal growth temperature of 37°C. The B. subtilis cells were cold shocked at 25°C, 20°C, 15°C, and 10°C. A total of 53 polypeptides were induced at the various cold shock temperatures and were revealed by two-dimensional gel electrophoresis. General stress proteins were identified by a comparative analysis with the heat shock response of B. subtilis. Some unique, prominent cold shock proteins such as the 115 kDa, 97 kDa, and 21 kDa polypeptides were microsequenced. Sequence comparison demonstrated that the 115-kDa protein had homology to the TCA cycle enzyme, aconitase.     

Ethylene Glycol Utilization,Cold and Ethylene Glycol Shockand Acclimation Proteins in a Psychrotrophic Bacterium

A psychrotrophic Pseudomonas fluorescens was isolated that utilizes ethylene glycol as a sole carbon source, with removal efficiencies of 98% and 96% in 20 and 55 days at 25° and 5°C, respectively. The response of the psychrotroph to environmental shifts was investigated using two-dimensional SDS-PAGE and computing scanning laser densitometry. During a 25°C to 5°C cold shock, the microorganism induced ten cold shock proteins. Under conditions of constant growth at 5°C, five cold acclimation proteins were synthesized. Ethylene glycol shock induced 14 ethylene glycol shock proteins. Ten ethylene glycol acclimation proteins were found. Similarities between the shock proteins and acclimation proteins for cold shock and acclimation and the ethylene glycol shock and acclimation may suggest that these proteins are of significance to both shock recovery as well as constant growth in a new environment.     

PHYSIOLOGICAL AND BIOCHEMICAL MECHANISMS OF TEMPERATURE SHOCKS ON OVERWINTERING MATURE LARVAE OF PINE NEEDLE GALL MIDGE THECODIPLOSIS JAPONENSIS (DIPTERA: CE-CIDOMYIIDAE)*

Abstract The supercooling points of cold (-10C and -5C) and heat (37 C, 40 C and 45 C) shocked overwintering larvae were nearly the same as that of un-shocked ones (ca. -20C). Temperature shocks enhanced the ability to endure subzero temperature (- 15C, 3 h), and the cold shock treatment had more significant effect on maintaining larval survival than that of heat shock. It is the third insect that heat shock and cold shock enhanced its survival rate under low temperature simultaneously. A special stress protein (MW = 83 kD) was expressed under cold shock at -10 C and heat shock at 40 C or 45 C. It is also a few instances that a stress protein was expressed in the same insect under both heat shock and cold shock simultaneously. Meanwhile, the antioxidant system under different treatments was studied. Rapid cold hardening process had no oxidative stress because of the increase content of reduced glutathione and activity of glutathione reductase, but other treatments had.     

New insights into the genetic basis of natural chilling and cold shock tolerance in rice by genome‐wide association analysis

In order to understand cold adaptability and explore additional genetic resources for the cold tolerance improvement of rice, we investigated the genetic variation of 529 rice accessions under natural chilling and cold shock stress conditions at the seedling stage using genome‐wide association studies; a total of 132 loci were identified. Among them, 12 loci were common for both chilling and cold shock tolerance, suggesting that rice has a distinct and overlapping genetic response and adaptation to the two stresses. Haplotype analysis of a known gene OsMYB2, which is involved in cold tolerance, revealed indica–japonica differentiation and latitude tendency for the haplotypes of this gene. By checking the subpopulation and geographical distribution of accessions with tolerance or sensitivity under these two stress conditions, we found that the chilling tolerance group, which mainly consisted of japonica accessions, has a wider latitudinal distribution than the chilling sensitivity group. We conclude that the genetic basis of natural chilling stress tolerance in rice is distinct from that of cold shock stress frequently used for low‐temperature treatment in the laboratory and the cold adaptability of rice is associated with the subpopulation and latitudinal distribution.     

Inhibition of thymidine phosphorylase in vivo provides a rapid method for switching DNA labeling

Summary The interaction between nuclear ploidy and chloroplast DNA content was investigated in the unicellular green alga Chlamydomonas reinhardtii. DNA was extracted from both exponentially growing and synchronized haploid and diploid strains and analysed by CsCl equilibrium density centrifugation in an analytical ultracentrifuge. It was found that the doubling of the nuclear genome in diploids was linked to a doubling of the chloroplast DNA content per cell.     

The synthesis of cold shock proteins and cold acclimation proteins in the psychrophilic bacteriumAquaspirillum arcticum

The synthesis of cold shock proteins (csps) in response to cold shock, and of cold acclimation proteins (caps) in response to continuous growth at low temperature, in the psychrophileAquaspirillum arcticum was investigated. With two-dimensional gel electrophoresis and computing scanning laser densitometry, cold shock treatments (10° to 0°C, 5° to 0°C, and 10° to 5°C) induced a total of 14 csps, 6 of which were induced by all three cold shocks. The production of caps in response to continuous growth at 0°C was also found. Five of the 8 caps produced were also csps which suggests that these proteins may share a common involvement in cold adaptation.     

Solution structure of GSP13 from <Emphasis Type="Italic">Bacillus subtilis</Emphasis> exhibits an S1 domain related to cold shock proteins

GSP13 encoded by gene yugI is a σ^B-dependent general stress protein in Bacillus subtilis, which can be induced by heat shock, salt stress, ethanol stress, glucose starvation, oxidative stress and cold shock. Here we report the solution structure of GSP13 and it is the first structure of S1 domain containing protein in Bacillus subtilis. The structure of GSP13 mainly consists of a typical S1 domain along with a C-terminal 50-residue flexible tail, different from the other known S1 domain containing proteins. Comparison with other S1 domain structures reveals that GSP13 has a conserved RNA binding surface, and it may function similarly to cold shock proteins in response to cold stress.     

Heat shock and cold shock in Deinococcus radiodurans

On the basis of acquired thermotolerance and cryotolerance, the optimal heat shock and cold shock temperatures have been determined for Deinococcus radiodurans. A heat shock at 42°C maximized survival at the lethal temperature of 52°C and a cold shock at 20°C maximized survival after repeated freeze-thawing. Enhanced survival from heat shock was found to be strongly dependent on growth stage, with its greatest effect shortly after phase. Increased synthesis of a total of 67 proteins during heat shock and 42 proteins during cold shock were observed by two-dimensional polyacrylamide gel electrophoresis (2D PAGE) and autoradiography. Eight of the most highly induced heat shock proteins shown by 2D PAGE were identified by MALDI-MS as Hsp20, GroEL, DnaK, SodA, Csp, Protease I and two proteins of unknown function.     

Cold shock response inLactococcus lactis ssp.diacetylactis

The acquired freeze-thaw tolerance was investigated forLactococcus lactis ssp.diacetylactis. Pretreatment of microorganisms at less severe temperatures to initiate cold tolerance gaveL. lactis ssp.diacetylactis improved cell viability after successive freezings and thawings. The ability of cells to survive freeze-thaw was dependent on factors experienced prior to freezing. Factors affecting lactic acid bacteria survival during freeze-thaw cycles were found to be different diluents, growth phase, and different cold temperatures. Viability experiments showed that this strain displaying cold shock cryotolerance had an improved survival capacity in stationary phase. The plasmid contents of lactic acid bacteria isolated from different types, DRC-2 and DRC-2C, were examined and compared with the plasmid contents of culture collection strains both before and after cold shock treatment. Using agarose gel electrophoresis, no obvious correlation between the cold shock response and the number of plasmids in the cell could be observed.     

The effect of cold shock on the free amino acid pool of rotan pondfish <Emphasis Type="Italic">Perccottus glehni</Emphasis> (<Emphasis Type="Italic">Eleotridae,Perciformes</Emphasis>)

The effect of cold shock on the free amino acid pool of the pondfish P. glehni not adapted to hibernation has been studied. In the beginning of September, after four days of cold shock, a decrease in the blood level of essential amino acids and an increase in the level of alanine and three-fold increase in the level of γ-aminobutyric acid (GABA) were observed. Changes in the free amino acid pool in the mussels occur in two stages. Namely, in a considerable decrease in their concentration after two days of cold shock followed by an even more significant increase in their amount after four days of shock. In the brain changes in the free amino acid pools are associated with their total decrease followed by continuous significant decrease in the level of taurine during the first four days of cold shocking. The obtained results are compared with previously obtained data on the free amino acid content in muscles and blood of P. glehni during preparation for winter sleep and the beginning of hibernation.     

Context‐dependent effects of cold stress on behavioral,physiological, and life‐history traits of the red flour beetle

Animals are exposed in nature to a variety of stressors. While stress is generally harmful, mild stress can also be beneficial and contribute to reproduction and survival. We studied the effect of five cold shock events versus a single cold shock and a control group, representing three levels of stress (harsh, mild, and no stress), on behavioral, physiological, and life‐history traits of the red flour beetle (Tribolium castaneum, Herbst 1797). Beetles exposed to harsh cold stress were less active than a control group: they moved less and failed more frequently to detect a food patch. Their probability to mate was also lower. Beetle pairs exposed to harsh cold stress frequently failed to reproduce at all, and if reproducing, females laid fewer eggs, which were, as larvae in mid‐development, smaller than those in the control group. However, harsh cold stress led to improved female starvation tolerance, probably due to enhanced lipid accumulation. Harsh cold shock also improved tolerance to an additional cold shock compared to the control. Finally, a single cold shock event negatively affected fewer measured response variables than the harsh cold stress, but also enhanced neither starvation tolerance nor tolerance to an additional cold shock. The consequences of a harsher cold stress are thus not solely detrimental but might even enhance survival under stressful conditions. Under benign conditions, nevertheless, harsh stress impedes beetle performance. The harsh stress probably shifted the balance point of the survival‐reproduction trade‐off, a shift that did not take place following exposure to mild stress.     

CspC and CspD are essential for Caulobacter crescentus stationary phase survival

The cold shock response in bacteria involves the expression of low-molecular weight cold shock proteins (CSPs) containing a nucleic acid-binding cold shock domain (CSD), which are known to destabilize secondary structures on mRNAs, facilitating translation at low temperatures. Caulobacter crescentus cspA and cspB are induced upon cold shock, while cspC and cspD are induced during stationary phase. In this work, we determined a new coding sequence for the cspC gene, revealing that it encodes a protein containing two CSDs. The phenotypes of C. crescentus csp mutants were analyzed, and we found that cspC is important for cells to maintain viability during extended periods in stationary phase. Also, cspC and cspCD strains presented altered morphology, with frequent non-viable filamentous cells, and cspCD also showed a pronounced cell death at late stationary phase. In contrast, the cspAB mutant presented increased viability in this phase, which is accompanied by an altered expression of both cspC and cspD, but the triple cspABD mutant loses this characteristic. Taken together, our results suggest that there is a hierarchy of importance among the csp genes regarding stationary phase viability, which is probably achieved by a fine tune balance of the levels of these proteins.