山东泰山发现白喉斑秧鸡和酒红朱雀北大核心CSCD

2020年7月8日6:00时,在山东省泰安市泰山西麓樱桃园山谷间的溪流边(117°03′01″E,36°13′26″N,海拔320 m),记录到1只秧鸡,立于灌丛中,看见有人便快速隐匿于溪流边草丛中,依据其体型中等,头颈及上胸红褐色,颏部、喉部偏白色,背部、两翼、尾羽橄榄褐色,腹部、两胁、尾下覆羽具黑色白色横斑,虹膜鲜红色,喙铅灰色,跗跖灰绿色等特征,参考《中国鸟类图鉴》(赵欣如2018)鉴定为白喉斑秧鸡(Rallina eurizonoides)雄鸟。当日16:10时,在同一地点再次记录到1只。     

Allometric relations in three species of finches (Aves: Fringillidae)

Static nestling, adult and ontogenetic allometry were analysed in three species of finches. Static nestling allometry was very similar across age in early ontogeny and among species and could be approximated by a single matrix of phenotypic variances and covariances. The first eigenvector of this matrix showed negative allometry of bill and tarsus to mass, but positive for wing length to mass. Adult static allometry was also very similar among species, but differed from nestling pattern. In adults the bill had a positive allometry in relation to tarsus and wing, but negative to mass, while tarsus and wing were unrelated to mass. The ontogenetic allometry in each species was very similar to nestling static allometry. Viewed in relation to final size, bill characters grew more slowly than body characters, but for a longer time, which created the difference between adult and nestling allometric patterns. There were differences among species both with regard to elevation and slope of allometric coefficients, suggesting that the differences among species came about by changes in the three fundamental ontogenetic parameters namely growth rate, onset of growth and offset of growth.     

Sillem's Mountain Finch Leucosticte sillemi is a valid species of rosefinch (Carpodacus,Fringillidae)

Sillem's Mountain Finch Leucosticte sillemi was described in 1992 on the basis of an adult and an immature specimen collected in western Tibet in September 1929, but its taxonomic validity and phylogenetic position have been unclear. Based on phylogenetic analysis of mitochondrial DNA from the holotype, we show that L. sillemi is not a colour morph of Brandt's Mountain Finch Leucosticte brandti but represents a valid, previously overlooked species of rosefinch (Carpodacus) that has secondarily acquired a pale plumage convergent on that of Leucosticte. Sillem's Mountain Finch is one of the least known species of bird and represents the only known species of rosefinch in which males have no reddish plumage coloration. This species and its sister taxon, the Tibetan Rosefinch Carpodacus roborowskii, are likely to be the world's highest‐altitude sister‐species pair of birds.     

Molecular, morphological and behavioural data reveal the presence of a cryptic species in the widely studied Drosophila serrata species complex

The Drosophila serrata species complex from Australia and New Guinea has been widely used in evolutionary studies of speciation and climatic adaptation. It is believed to consist of D. serrata, D. birchii and D. dominicana, although knowledge of the latter is limited. Here we present evidence for a previously undescribed cryptic member of the D. serrata species complex. This new cryptic species is widespread in far north Queensland, Australia and is likely to have been previously mistaken for D. serrata. It shows complete reproductive isolation when crossed with both D. serrata and D. birchii. The cryptic species can be easily distinguished from D. serrata and D. birchii using either microsatellite loci or visual techniques. Although it occurs sympatrically with both D. serrata and D. birchii, it differs from these species in development time, viability, wing size and wing morphology. Its discovery explains patterns of recently described mitochondrial DNA divergence within D. serrata, and may also help to clarify some ambiguities evident in early evolutionary literature on reproductive incompatibility within the D. serrata species complex.     

Age ratio and survival of Common Rosefinch (<Emphasis Type="Italic">Carpodacus erythrinus</Emphasis>, Passeriformes,Fringillidae) in a local population based on ringing data

The ringing data on Common Rosefinch obtained during thirteen field seasons (2002–2014) at the National Park “Russky Sever” (Vologda region) are analyzed. Birds were trapped in two sites 59 km apart. The age of the birds (yearlings or first breeders and adults) was determined according to the plumage color in every male captured with mist nets. The apparent survival rate of adult individuals was determined using two methods: according to the ratio of males’ age and the CJS model (Lebreton et al., 1992; Bursky, 2011). A total of 713 captures of 657 individuals were analyzed. The ratios of ages in the males from the sites studied did not differ; yearlings amounted to 56% of all males. The rate of survival in the males based on the age ratios was estimated at 44 ± 2%. The apparent survival rate obtained using the CJS model was significantly higher (61 ± 6%). The survival rate of adult rosefinches in two sites did not differ and did not depend on sex. Literature materials on the age ratio and survival of rosefinches in local populations are analyzed. There is a suggestion that the mismatch of the survival rates obtained by two methods and the high proportion of yearling males in the banding captures can be explained by the fact that the majority of individuals of that age category did not participate in nesting.     

棕朱雀取食含盐墙土现象的观察

1996~1998年发现重庆市开县一字梁区域有棕朱雀(Carpodacus edwardsii)分布。此后陆续发现巫山县的葱坪和梨子坪也有棕朱雀分布,但遇见数量和遇见率远低于开县一字梁。调查发现,棕朱雀主要集中分布在海拔较高(1 841~2 560 m)地处僻远的管护站房屋边活动,并在开县一字梁观察到棕朱雀具有偏爱啄食含盐墙土的行为。鉴于当地居民营建房屋时,为了防止蚂蚁入侵,在砌筑石块的泥浆中添加食盐,我们分别对管护站的2所房屋及其附近3所传统民居房屋的墙缝土进行了土样化验分析,管护站的2所房屋墙缝土的含盐量(分别为12.92 mg/g、16.84 mg/g)远高于附近的3所民居房屋(分别为1.31 mg/g、7.18 mg/g、0.53 mg/g)。据此认为,人工盐源很可能是维系该区域棕朱雀种群数量和生境质量的生态因子。     

Molecular and morphological data reveal two new species of Scolecobasidium

Two species of Scolecobasidium were isolated from soil in Hainan and Hebei Provinces, China. The two taxa develop broadly ellipsoid conidia and ellipsoidal to oblong conidia, respectively. Their taxonomic placement in Scolecobasidium was confirmed by morphological similarity and phylogenetic analysis of the RNA polymerase II subunit b (RPB2) sequence data. The two fungi, which are morphologically distinct to previously described species, and occupy unique positions in the phylogenetic tree, are thus introduced as the new species Scolecobasidium terricola and S. ellipsoideum. They are described and illustrated and compared with similar species in the genus.     

Territorial song and song neighbourhoods in the Scarlet Rosefinch Carpodacus erythrinus

Throughout the range of the Scarlet Rosefinch, its territorial song consists of 3–9 (usually 4–5) elements, of which there are 5 different types. The differences lie in the way the pitch of the element changes in time (frequency "slope") and the width of the frequency band. Within a given type of song, the various elements can be present in almost any combination. Therefore, so many song types can be formed that the songs in even small parts of the species' area are clearly distinct from one another. Despite this capacity for variation, however, by chance identical songs may be sung in widely separated parts of the area, in some cases by different subspecies.
The species has not developed large-scale dialects or regiolects based on a song tradition acquired during an early imprinting phase. Scarlet Rosefinches tend to breed in small colonies, groups of up to about 15 pairs characterized by the same type of song (song neighbourhoods, formed by the development of a microlect).
Microlects develop by a founder effect. When males, near one-year old or older, join one another to form isolated colonies after arrival in the breeding region, they adopt ("learn") the song type that will eventually characterize the colony from the first male to arrive at the site. After the colony has been founded, in most cases each male uses only one type of song during a breeding season, with practically no variation of the temporal and frequency parameters.
Singing the same type of song, the members of a colony accept one another sufficiently to allow the breeding territories to be closely packed. It appears that a long-lasting capacity for acoustic learning, in combination with colony-like breeding and great ecological flexibility, has allowed the Scarlet Rosefinch to become the most successful species of the genus Carpodacus .     

Molecular phylogenetic analysis of Fringillidae, "New World nine-primaried oscines" (Aves: Passeriformes)

Systematic studies of Fringillidae have long been problematic due to their apparent recent and explosive diversification. We present phylogenetic hypotheses of 44 fringillids that represent the overall diversity of the family, based on 3.2 kb of mitochondrial DNA sequences, and phylogenetic analyses for a subset of fringillids based on new and published mitochondrial cytochrome b sequences. Monophyly of Fringillidae and its two constituent subfamilies, Fringillinae and Emberizinae, was consistently supported with the exceptions of Peucedramus being placed outside of Fringillinae and Euphonia being placed within Fringillinae instead of within Emberizinae. Within Emberizinae, Thraupini (tanagers), Cardinalini (cardinals and grosbeaks), and Emberizini (New World sparrows) did not form separate monophyletic groups. Our results indicate that Emberizinae consists of three clades, each with a different overall geographical distribution. Several taxa traditionally considered members of Thraupini fall outside of the thraupine clade, including the only North American genus, Piranga. Consequently, the thraupine clade includes only Neotropical species. Increasing evidence suggests that Fringillidae, often called "New World nine-primaried oscines," does not in fact have a New World origin.     

Molecular and morphological analyses revealed a cryptic species of dojo loach Misgurnus anguillicaudatus (Cypriniformes: Cobitidae) in Japan

Although it has been reported that populations of the Japanese dojo loach Misgurnus anguillicaudatus (Cypriniformes: Cobitidae) belong to two distinct mitochondrial (mt)DNA (Type I and Type II), the taxonomic status of the species remains unresolved. To address this question, nuclear DNA and morphological analyses were performed on M. anguillicaudatus population in the Nakaikemi Wetland, where Type I and Type II lineages are sympatric. Results suggest the existence of a cryptic species (Type I) within the Japanese dojo loach.     

Molecular approaches identify known species, reveal cryptic species and verify host specificity of Chinese Philotrypesis (Hymenoptera: Pteromalidae)

Philotrypesis, a major component of the fig wasp community (Hymenoptera: Pteromalidae), is a model taxon for studying male fighting and mating behaviour. Its extreme sexual dimorphism and male polymorphism render species identification uncertain and in-depth research on its ecology, behaviour and other evolutionary topics challenging. The fig wasps' enclosed habitat within the syconia makes their mating behaviour inaccessible, to the extent of matching conspecific females and males. In this study, we combine morphological and molecular analyses to identify species of Philotrypesis sampled from south China and to associate their extraordinarily dimorphic genders and labile male morphologies. Morphological evaluations of females identify 22 species and 28 male morphs. The mitochondrial cytochrome c oxidase I and nuclear internal transcribed spacer 2 data detect 21 species using females, and 15 species among the males. Most of the males match the species as delimited by females. Both markers reveal cryptic species in P. quadrisetosa on Ficus vasculosa. Most species of wasps live on one species of fig but three species co-occur in two hosts (F. microcarpa and F. benjamina), which indicates host switching.     

Complete phylogeny and historical biogeography of true rosefinches (Aves: Carpodacus)

True rosefinches (Aves: Carpodacus) are restricted to Eurasia, and 19 out of 25 species occur in the Sino‐Himalayas, making this the likely centre of origin. To test this hypothesis, suggested species splits had to be evaluated and potential further cryptic diversity unravelled. A taxon‐complete dated molecular phylogeny was reconstructed using maximum‐likelihood and Bayesian methods. Maximum‐parsimony and likelihood approaches were applied to deduce ancestral areas. Rosefinches, including the widespread Carpodacus erythrinus (Pallas, 1770), originated in south‐west China (and the Himalayas) 14 Mya, and gave rise to a smaller clade consisting of C. erythrinus, Haematospiza sipahi (Hodgson, 1836), and Chaunoproctus ferreorostris (Vigors, 1829), and a larger clade with 22 species. The latter split into four major lineages through vicariance during the uplift of the Himalayas. The suggested species splits of dubius from Carpodacus thura Bonaparte & Schlegel, 1850, formosanus from Carpodacus vinaceus Verreaux, 1871, grandis from Carpodacus rhodochlamys Brandt, 1843, verreauxii from Carpodacus rodopeplus (Vigors, 1831) (even polyphyletic) could be supported, whereas the suggested split of severtzovi from Carpodacus rubicilla (Güldenstädt, 1775) appears to be too young, and should be considered intraspecific. On the other hand, the central Asian lineage of Carpodacus synoicus Temminck, 1825 deserves species rank [Carpodacus stolickae (Hume, 1874)]. The Carpodacus eos/pulcherrimus complex consists of four lineages, pulcherrimus/argyrophrys and davidianus [Carpodacus pulcherrimus s.s. (Moore, 1856)], and eos and waltoni [Carpodacus waltoni (Sharpe, 1905)]. © 2013 The Linnean Society of London     

Quantitative trait and allozyme divergence in the Greenfinch (Carduelis chloris, Aves: Fringillidae)

Quantitative trait divergence and variability among 12 greenfinch populations across continental Europe was examined and compared to divergence in neutral genetic markers (allozymes). The added among locality variance component for 16 skeletal traits was large (mean 28%, range 4–48%) equalling a divergence of up to three SD units. The divergence in quantitative traits (Qst = 0.04-0.48) greatly exceeded that in alloymes (F_ST= 0.01-0.07), indicating the differentiation in quantitative traits to be larger than expected by mutation and drift alone. This conclusion was consistent also with results from the multivariate approach of Rogers & Harpending. However, genetic and morphometric distances between populations were positively correlated, even when controlling for the geographic distance separating pairs of populations. In concordance with Bergmann's rule, most traits were strongly and positively correlated with latitude, indicating latitudinally ordered genetic or/and environmental effects. However, the correlation between lower mandible width and latitude was strongly negative, demonstrating an inverse relationship between beak size and body size across the populations. These results are interpreted to reflect the re-colonization of history of northern Europe (genetic and geographic distances correlated) which has been paralleled by selection acting on quantitative traits (Q_ST>F_ST)- In particular, the counter-gradient variation in beak width, a functionally important trait, is suggestive of an adaptive basis for quantitative trait divergence.     

Molecular systematics and species limits in the Philippine fantails (Aves: Rhipidura)

Islands have long-attracted scientists because of their relatively simple biotas and stark geographic boundaries. However, for many islands and archipelagos, this simplicity may be overstated because of methodological and conceptual limitations when these biotas were described. One archipelago that has received relatively little recent attention is the Philippine islands. Although much of its biota was documented long ago, taxonomic revision and evolutionary study has been surprisingly scarce, and only a few molecular phylogenetic studies are beginning to appear. We present a molecular phylogeny and taxonomic revision for the Philippine fantails (Aves: Rhipidura) using nuclear and mitochondrial DNA sequences. Our results suggest that current taxonomy underestimates diversity in the group. Some morphologically distinct subspecies warrant species status, whereas one was indistinguishable genetically and morphologically and should not be retained. A few taxa require additional sampling for thorough taxonomic assessment. Patterns of diversity within Philippine Rhipidura mostly corroborate predictions of the Pleistocene aggregate island complex (PAIC) hypothesis, in which diversity is expected to be partitioned by deep water channels separating Pleistocene aggregate islands rather than by current islands. Substantial structure within PAIC clades indicates that additional drivers of diversification should be considered.     

Identification of 15 polymorphic microsatellite loci in the Príncipe seedeater (Serinus rufobrunneus) and assessment of their utility in nine other Serinus species (Fringillidae,Aves)

We tested 74 passerine microsatellite loci for cross‐amplification in the Príncipe seedeater (Serinus rufobrunneus), and identified 15 loci that were both polymorphic and easy to score. In a sample of 113 individuals, the number of alleles ranged between three and 71. Three loci deviated from Hardy–Weinberg equilibrium after correcting for multiple tests, and one locus had high estimated null allele frequency. These 15 loci were highly successful in amplifying polymorphic products also in nine other Serinus species.     

Molecular phylogenetic species delimitation in the aquatic genus Ottelia (Hydrocharitaceae) reveals cryptic diversity within a widespread species

Journal of Plant Research - Ottelia, a pantropical genus of aquatic plants belonging to the family Hydrocharitaceae, includes several narrowly distributed taxa in Asia. Although the Asian species...     

Molecular and morphological analyses of EuropeanAconitum species (Ranunculaceae)

The systematics of the yellow-floweredAconitum lycoctonum species complex (Ranunculaceae) has long been considered difficult because of high morphological variability and hypothesized hybridization. To elucidate the systematic value of these taxa, and to study their phylogeny in a broader context, we studied all species of the subgenusLycoctonum from Europe and the Caucasus Mountains and the European species of the subgen.Aconitum. We sequenced the ITS region and the chloroplast intergenic spacerpsbA-trnH and conducted parsimony analyses. We also measured morphological characters from 19A. lycoctonum populations. The two subgenera in Europe are clearly separated but hybridization between subgenera might have taken place in the past. Sequence variation withinA. lycoctonum and among all taxa of subgenusLycoctonum was very low and probably the result of recent speciation, leading to one morphologically highly variable species in which color morphs could be seen as subspecies. There was high morphological variability within and among populations and the morphological characters have no value as systematic characters.     

Molecular-genetic analyses reveal cryptic species of trematodes in the intertidal gastropod, Batillaria cumingi (Crosse)

Cryptic species of the digeneans, Cercaria batillariae (Heterophyidae) and an undescribed philophthalmid, were detected using polymerase chain reaction-based restriction fragment-length polymorphism methodology and sequence analyses. These digeneans were all collected from the same species of gastropod first intermediate host, Batillaria cumingi (=Batillaria attramentaria). The mitochondrial cytochrome oxidase subunit 1 gene (approximately 800bp) and nuclear internal transcribed spacer 1 gene (approximately 400bp) were used for species level discrimination. Restriction fragment-length polymorphism analyses of cytochrome oxidase subunit 1 gene showed that C. batillariae included 10 distinguishable fragment patterns, and the philophthalmid included five patterns. On the basis of subsequent sequence analyses, the restriction fragment length polymorphism patterns of C. batillariae were grouped into eight phylogenetically distinct lineages and those of the philophthalmid into three phylogenetically distinct lineages. There was no evidence of gene flow among the different lineages due to the lack of heterozygosity within the observed internal transcribed spacer 1 gene fragment patterns. This suggests that all of these lineages are different species. Most of these species were widespread, but some exhibited restricted geographic distributions. We discuss the implications of these findings for host specificity of these trematodes. These results demonstrate the utility of genetic analysis to distinguish species of morphologically similar trematodes. Hence, trematode species diversity may often be underestimated when species identifications are limited to morphological features.