Association in Long-Evans hooded rats of red cell 2,3-diphosphoglycerate levels with hemoglobin types

Two sublines of commercially available Long-Evans hooded rats have been developed by genetic selection. These sublines have widely differing levels of erythrocyte 2,3-diphosphoglycerate (DPG) due to different alleles at a single genetic locus. In the present work, it is shown that rats from the commercial population are also polymorphic at a hemoglobin locus, probably involving two alleles of the ^III-globin chain locus. Particular hemoglobin types have been found to be strongly associated with certain DPG types, not only in the high-DPG and low-DPG lines but also in the commercial population. Two explanations for this association are considered. One is a single-locus hypothesis, with hemoglobin allelic variation causing DPG variation, and the other is a two-locus hypothesis, with marked linkage disequilibrium.This work was supported by a Michigan Heart Association Grant, by the Meyers Foundation, and by NIH Training Grant (5 T01-GM-0071).     

Highly polymorphic repeat marker within the β-amyloid precursor protein gene

We have identified a polymorphic compound dinucleotide repeat sequence in intron 1 of the -amyloid precursor protein (APP) gene on chromosome 21. Using polymerase chain reaction (PCR) amplification of the locus, designated APPivsl, we detected 13 alleles in the CEPH family members (heterozygosity = 0.69). Lod score analysis showed complete linkage of the marker to the loci D21S210 and D21221.     

The genetics of some polymorphic Esterases in Drosophila simulans

Analysis of strains of Drosophila simulans derived from a natural population in Turkey has shown that three alleles at the Esterase-6 locus are present in some strains. These alleles produce allozymes with mobilities equivalent to other esterases coded for by three other loci, one of which () is tightly linked to Esterase-6. Active alleles at all these loci are present at low frequencies. The presence of the active allele at the locus in laboratory strains in absolutely correlated with the presence of the Esterase 6 ^-3 allele and strong linkage disequilibrium between these two loci exists.It appears possible that the origin of one or more of these hitherto unremarked loci, whose active alleles are expressed only in females, lies in gene duplication, coupled with the action of selection in an environment thought to be heavily     

On the tryptic peptides from hemoglobin chains of six carnivores

Summary The amino acid compositions of the tryptic peptides of the following carnivore hemoglobin chains have been determined: gray fox (Urocyon cineroargenteus); raccoon (Procyon lotor); polar bear (Thalarctos maritimus); coati mundi (Nasua nasua) chain; coati mundi (Nasua narica) two chains; cat (Felis catus) chain; and lion (Panthera leo) chain. These provide a basis for future sequencing of these hemoglobins and construction of an evolutionary tree. The specific results are summarized in the following article (Stenzel and Brimhall, 1977).     

Dual localization of acid hydrolases in endoplasmic reticulum and in lysosomes

Summary Dissimilar enzyme locations obtained on occasion by the post- and simultaneous-coupling techniques employing the substrate naphthol AS-BI -glucosiduronic acid were attributed to the inadequate incorporation of substrate into lysosomal membranes in the post-coupling technique on the one hand, as well as to the inhibition of cytoplasmic enzyme by diazotate in the simultaneous coupling technique on the other hand. The use of a fixative solvent mixture prior to the enzyme staining reaction appeared to labilize lysosomal membranes, to improve fixation and to eliminate fiber artefacts. In male mice which have been androgenized by the injection of gonadotrophin, kidney homogenates, subsequently prepared, exhibited an immediate increase in the specific activity of microsomal -glucuronidase while lysosomal -glucuronidase was unchanged for the first 36 hours.This event at 36 hours corresponded with enhanced cytoplasmic but not lysosomal staining. Diffuse reactions in enzyme morphology are discussed as well as the origin of lysosomal -glucuronidase in mouse kidney and the dual localization of hydrolases in endoplasmic reticulum and lysosomes.     

Water-soluble proteins of mature barley endosperm: genetic control,polymorphism, and linkage with β-amylase and spring/winter habit

Summary Water-soluble proteins (WSP-2 and WSP-3) and -amylase (-AMY-1) were extracted from mature endosperms of 44 spring and 39 winter barley genotypes. The protein and enzyme isoforms were separated in isoelectric focusing gels with a pH gradient of 4–6.5. The Wsp-3 and -Amy-1 loci were located to chromosomes 4H using the wheat/barley chromosome addition lines. Segregation analysis of F₂ and doubled haploid populations showed Wsp-2 and -Amy-1 to be tightly linked, with a map distance of 11 cMorgans. Isoforms of WSP-2 possessed similar pIs to that of WSP-3 and overlapping bands were observed in the gels. These bands segregated independently in F₂ and doubled haploid populations, implying two unlinked genes. All three loci were found to be polymorphic: two alleles were detected at the Wsp-2 locus, three at Wsp-3 and two at -Amy-1. The frequency of alleles at all three loci was found to be different in winter and spring genotypes. Spring genotypes possessed a wider range of phenotypes than winter genotypes. Spring and winter genotypes could be distinguished on the basis of WSP-3 and - AMY-1 phenotypes. The linkage between Wsp-3 and -Amy-1 loci and genes controlling spring/winter habit on chromosome 4H is discussed. It is concluded that Wsp-3 and -Amy-1 can be used as genetic markers for spring/winter habit in barley genetic research and breeding.     

Heterogeneity of the hemoglobin of the Ohrid trout (Salmo L. typicus)

We have analyzed the hemoglobins of five individual trout from the Ohrid Lake (Salmo L. typicus) by electrophoretic methods, by reversed-phase high-performance liquid chromatography, and by limited structural analyses. The two major classes of hemoglobin are type I (35% of total) and type IV (65%). Type IV is the major oxygen-transporting hemoglobin; it consists of three types of chain (in about equal quantities) and three types of chain (one major and two minor types). Several structural differences have been observed between these three (IV) chains and between the three (IV) chains, suggesting a complex genetic system governing the synthesis of these proteins. Moreover, a few amino acid substitutions occur at positions involved in contacts between chains, which suggests that differences in oxygen affinity may exist between these various type IV hemoglobins. Type I hemoglobin is less complex because it contains one type of chain and two chains; the latter two differ in numerous positions, suggesting duplications of the (I)-globin gene. The and chains of type I hemoglobin differ considerably from the and chains of type IV hemoglobin, indicating the existence of (I)- and (I)-globin genes separate from the (IV)- and (IV)- globin genes.This study was supported in part by the Yugoslav-American Joint Funds, pp 812 (to G.D.E.), and by United States Public Health Service Research Grant HLB-05168 (to T.H.J.H.).     

Primary structure of two nonallelicβ-globin chains from DBA/2 mice

The amino acid sequences of the major and minor globin chains from DBA/2 mice have been determined. This information is of interest because DBA/2 mice are the strain of origin for most murine erythroleukemia lines. The primary structure of DBA/2 globins agrees completely with that predicted from the coding properties of BALB/c globin genes. This identity does not support a rapid evolutionary divergence in inbred mouse strains, at least at these loci in these strains.This work was supported in part by National Institutes of Health Grants AM26956, HL24908, and AM14923 and by the Department of Energy under Contract DE-AC05-840R21400 with Martin Marietta Systems. The SUNY Buffalo Sequencing Facility was supported by a grant from the James Cummings Foundation and National Institutes of Health Grants RR05400 and RR07066.     

Structural comparison of the genes of two HLA-DR supertypic groups: The loci encoding DRw52 and DRw53 are not truly allelic

The organization and sequence of the HLA-DR chain genes are compared in the two supertypic groups, DRw52 and DRw53, which together account for more than 80% of HLA-DR alleles. From the structural data, we conclude that these two groups represent distinct lineages which have followed different patterns of evolution. The fine structure of the chain locus encoding the DRw53 specificity corresponds most closely to the DR II pseudogene in the DRw52 haplotypes. Concomitantly, the DR I locus in DRw53 haplotypes is more closely related to both of the two expressed DR loci of theDRw5 haplotypes (DR I and DR III). These two loci are the result of a recent duplication. This leads to the proposal that both expressed DR chain genes in the DRw52 haplotypes (DR I and DR III) are derived from a single precursor locus, while the two loci expressed in the DRw53 haplotypes are derived from distinct ancestral loci. The genes encoding DRw52 and DRw53 are therefore not true alleles of the same original locus. A scheme is proposed that accounts for the evolution of DR specificities within the DRw52 and DRw53 groups of haplotypes. It is evident that the differentHLA-DR alleles are not structurally equidistant and that one must take into consideration different degrees of heterozygosity or mismatch among the DR alleles.     

The evolution of the α- and β-globin gene clusters in human populations

Summary DNA analysis of the - and -globin gene clusters has revealed substantial variability between individuals and populations. As well as restriction enzyme site and length polymorphisms, variation in gene copy number and type is observed. Because of this extensive polymorphism DNA analysis offers a highly informative method of studying genetic affinities between human populations. Haplotypes, consisting of a set of restriction enzyme polymorphisms distributed along the cluster, have been developed for both loci. Analysis of the molecular basis of numerous -thalassaemia alleles has revealed, in general, different sets of mutations in different populations, indicating that these postdate the racial divergence. Recent microepidemiological studies on the distribution of -thalassaemia support the hypothesis that this condition, like the {ie16-1}, has been selected because it confers protection against malaria. Population-specific DNA polymorphisms at these and other loci promise to be of considerable value to genetic anthropology.     

Linkage analyses using biochemical variants in mice. I. Linkage of the hemoglobin beta-chain and glucosephosphate isomerase loci

At least five alleles have been reported at the Hba locus, and each specifies the structure of an -chain variant of mouse (Mus musculus) hemoglobin. Hba ^c has proved to be especially useful in genetic linkage experiments and is present in the inbred strains BDP/J, C3H/HeJ, C3HeB/FeJ, DE/J, FL/2ReJ, P/J, SEA/GnJ, SJL/J, SWR/J, ST/bJ, and WB/ReJ. There are three alleles at the hemoglobin -chain locus, Hbb. Hbb ^p is found in strain AU/SsJ; other strains have either Hbb ^s or Hbb ^d . The -chains of Hbb ^d and Hbb ^p hemoglobins can be alkylated with iodoacetate and have two reactive sites per molecule. The -chains of Hbb ^s hemoglobins do not react. If hemoglobins are alkylated before electrophoresis to determine phenotype, alleles at Hbb are codominant. Evidence is presented that the -chain of Hbb ^p hemoglobin, like that of Hbb ^d hemoglobin, has a reactive cysteinyl residue at position 13. Tests for genetic linkage between ^Hba, Hbb, and 11 other loci showed linkage between glucosephosphate isomerase (Gpi-1) and Hbb with 32±5% recombination. Gpi-1, therefore, is in linkage group I. The Hba locus was not linked with any marker tested.Supported by the Roche Institute of Molecular Biology, Nutley, New Jersey.     

Mouse haemoglobin beta chains. Comparative sequence data on adult major and minor beta chains from two species, Mus musculus and Mus cervicolor.

In inbred Mus musculus several different beta chains are known. In certain strains two beta chains are produced in unequal amounts by the two closely linked genes of the doublet breeding unit allele Hbb(d): Betadmaj and betadmin. One strain has a variant doublet allele, Hbb(p), which produces a variant minor beta chain, betapmin (the major beta chain, betapmaj, may not differ from betadmaj chain). Certain other strains have a singlet allele, Hbb(s), that produces only one beta chain, betas. Other species have different beta-chain patterns. In M. cervicolor two variant major beta chains are found, betacmaj (d-like) and betacmaj (s-like), both of which were found associated with minor beta chains. M. caroli has only one, 'Leporelike' beta chain, with structural features characteristic predominantly of betadmin chain in the N-terminal half and of betadmaj chain in the C-terminal half. The present paper presents sequence data on betas, betadmaj, betadmin, betapmin and betacmaj (d-like) chains. The data on betadmin chain cover almost the whole of that chain and show a minimum of nine differences from betadmaj chain and two from betapmin chain. It is suggested that the data on the beta chains of the various species show evidence for the past occurrence of double crossovers over regions within a gene coding for only one or a few amino acids, which events can be explained by the 'hybrid DNA' models of genetic recombination. Supplementary information on the amino acid sequence of the proteins has been deposited as Supplementary Publication SUP 50067 (36 pages) at the British Library Lending Division, Boston Spa, West Yorkshire LS23 7BQ, U.K., from whom copies can be obtained on the terms indicated in Biochem. J. (1976) 153, 5.     

Amino acid sequences of hemoglobin from guinea fowl (Numida meleagri) and California quail (Lophortyx californica) with phylogenetic analysis of major groups of Galliformes

We determined the complete amino acid sequences of the hemoglobin of two species, guinea fowl and California quail, in Galliformes from intact globin chain and chemical cleavage fragments in order to analyze the molecular evolution of hemoglobin for the classification of Galliformes. Galliformes have two types of hemoglobin components, HbA and HbD, which consist of identical chain and different chains. The sequences are similar to globin chains of Galliformes reported previously. These sequences were compared with those of other Galliformes (Phasianidae, Meleagrididae) using duck and goshawk as out-groups. The phylogenetic tree of major groups of Galliformes based on hemoglobin was similar to the tree model produced based on the amino acid sequence of lysozyme c.     

SELECTION FOR RECOMBINATION IN SMALL POPULATIONS

Abstract The reasons that sex and recombination are so widespread remain elusive. One popular hypothesis is that sex and recombination promote adaptation to a changing environment. The strongest evidence that increased recombination may evolve because recombination promotes adaptation comes from artificially selected populations. Recombination rates have been found to increase as a correlated response to selection on traits unrelated to recombination in several artificial selection experiments and in a comparison of domesticated and nondomesticated mammals. There are, however, several alternative explanations for the increase in recombination in such populations, including two different evolutionary explanations. The first is that the form of selection is epistatic, generating linkage disequilibria among selected loci, which can indirectly favor modifier alleles that increase recombination. The second is that random genetic drift in selected populations tends to generate disequilibria such that beneficial alleles are often found in different individuals; modifier alleles that increase recombination can bring together such favorable alleles and thus may be found in individuals with greater fitness. In this paper, we compare the evolutionary forces acting on recombination in finite populations subject to strong selection. To our surprise, we found that drift accounted for the majority of selection for increased recombination observed in simulations of small to moderately large populations, suggesting that, unless selected populations are large, epistasis plays a secondary role in the evolution of recombination.     

Sterols of male and female compound inflorescences of Zea mays L.

A comparison has been made between the sterols of male and female inflorescences and of pollen from Zea mays. The female inflorescence was shown to contain cholesterol, 24-methylcholesterol, 24-ethyl-5,22-cholestadien-3-ol, 24-ethylcholesterol and (28Z)-24-ethylidenecholesterol. Themale inflorescence contained the same five compounds together with 24-methylenecholesterol. Pollen contained 24-methylenecholesterol as its main sterol together with lesser amounts of cholesterol, 24-ethylcholesterol, (28Z)-24-ethylidenecholesterol, 24-methylene-5-cholest-7-en-3-ol and 4-methyl-24-methylene-5-cholest-7-en-3-ol.     

Expression of mRNAs for Ciliary Neurotrophic Factor (CNTF), Leukemia Inhibitory Factor (LIF), Interleukin-6 (IL-6), and Their Receptors (CNTFRα, LIFRβ, IL-6Rα, and gp130) in Human Peripheral Neuropathies

The mRNA levels of neuropoietic cytokines, ciliary neurotrophic factor (CNTF), leukemia inhibitory factor (LIF), and interleukin-6 (IL-6), and their receptor components (CNTFR, LIFR, IL-6R, and gp130) were examined in seventy-six patients with various peripheral neuropathies to determine the extent of expression of these cytokines and receptors, and their relationship to nerve fiber pathology and cell infiltration in the diseased nerves. The CNTF mRNA levels were significantly decreased in the diseased nerves and were correlated to residual myelinated fiber population. In contrast, the mRNA levels of LIF, IL-6 and the ligand-binding receptor components (CNTFR, LIFR and IL-6R) were elevated to variable extent in the diseased nerves. The CNTFR, LIFR, and IL-6R mRNA levels showed a weak positive correlation with the extent of demyelinating pathology and their levels were related to each other. Moreover, the CNTF and LIF mRNA levels were inversely proportional to the extent of macrophage invasion, whereas the CNTFR and IL-6R mRNA expressions were correlated to the increase in macrophage infiltration. The neuropoietic cytokine family and its receptor expressions in the diseased human nerves are regulated by an underlying pathology-related process rather than type of diseases, and could play a role in peripheral nerve regeneration and repair.     

Inheritance of structural alleles for goat hemoglobins: Site duplication and limited structural divergence for the alpha-chain locus

Four hemoglobin phenotypes have been detected among domestic goats by zonal electrophoresis. Breeding data indicate that two of these phenotypes represent animals homozygous at relevant structural loci and two represent heterozygotes. Electrophoresis of hemoglobin chains reveals both - and -chain variation. The phenotypes are interpreted in terms of genotypes which require a postulated duplication and subsequent divergence for the original -chain structural locus (see Fig. 5).This investigation was supported in part by Grants No. Am-10391 and Fr-07094 of the U.S. Public Health Service. In view of the current national situation for research support and its local effects, the authors will fill reprint requests only if the request is accompanied by a brief note explaining the anticipated utility of the reprint.     

Sequence and evolution of the gene for the monomeric globin I and its linkage to genes coding for dimeric globins in the insect Chironomus thummi

We isolated genomic clones containing sequences encoding globins I and IA from a Chironomus thummi thummi genomic library. Three clones contain globin IA (ctt-1A) genes, while one contains a globin I (ctt-1) gene. The coding regions of the four genes are identical except for the single base substitution accounting for the globin I/IA polymorphism. The noncoding DNA flanking the coding region is more than 98% similar, confirming a previous hypothesis that the globin ctt-1 and ctt-1A genes are alleles. Hemoglobins I and IA are monomeric in the insect hemolymph. Earlier in situ hybridization studies suggested that monomeric and dimeric globin genes are clustered at different chromosomal loci. In situ hybridization of ctt-1 DNA to polytene salivary gland chromosomes places the ctt-1 gene on the same band as genes for the dimeric globins II and VIIB, forcing revision of the earlier hypothesis that genes for monomeric and dimeric globin genes are at different loci. The evolution of the ctt-1 and ctt-1A alleles and of the two globin gene loci are discussed. Correspondence to: G. Bergtrom     

Deletion mapping of wildtype and mutant alleles at the B incompatibility factor of Schizophyllum

Summary Strains of Schizophyllum commune carrying mutations at the B incompatibility locus were crossed to strains with wildtype B alleles to determine the recombinational spectra of the mutations. An excellent correlation between recombining ability and mating behavior supports the hypothesis that many wildtype and mutant alleles are associated with deletions and that the degree of impairment of recombination and mating interaction reflects the size of the deletion.This study was supported by a grant from the United States-Israel Binational Science Foundation     

Secretion of unphosphorylated and phosphorylated xyloside-induced glycosaminoglycan chains

Secretion ofp-nitrophenyl--xyloside-induced glycosaminoglycan chains in cultured fibroblasts is considered to involve transport through the endoplasmic reticulum and the Golgi apparatus. Purified glycosaminoglycans from fibroblast secretions contain small amounts of covalently bound [³²P]phosphate. However, exhaustive digestion with chondroitin AC and ABC lyases yields an unphosphorylated linkage region tetrasaccharide in the majority of all polysaccharide chains. The phosphate label is associated predominantly with material of the expected behavior of linkage region hexasaccharides. Thus, phosphorylation is not a prerequisite to secretion of xyloside-induced glycosaminoglycan chains.