The Abundance of Different Peritrich Ciliates on Stone Surfaces in Contrasting Lowland Streams Throughout the Year

ABSTRACT. Pentrich ciliates attached to small stones from the beds of two streams, one large with hard water, the other small with soft water, were enumerated throughout an annual cycle. Throughout the year, Platycola was the dominant peritrich in both streams, except for a brief period during the spring when Vorticella and Carchesium predominated. Vorticella reached peak levels of 89 ciliates cm² of stone surface, and up to 102 Platycola per cm² of stone surface were found. Mean volumes of samples of the main species were calculated, and used to estimate the standing stock biomasses. using a standard value of dry weight per unit volume. Published values of the growth rates of representatives of the main genera were used to estimate production values, which totalled about 6.5 g dry weight of peritrich cytoplasm/m² of stream bed per annum in the large stream (mean annual density = 8.3 peritrichs/cm² of stone surface), and 33 g dry weight/m² of stream bed per annum in the small stream (mean annual density = 47 peritrichs/cm² of stone surface). Food supply, temperature and predation were the primary factors determining peritrich abundance     

Causes of episodic acidification in Alpine streams

SUMMARY 1. Despite their global importance as mountain landscapes, the effect of acid deposition on running waters in the Alps is still incompletely described. The acid–base status of 30 clearwater streams in Canton Ticino (Switzerland) was therefore assessed at low and high flow across a south/north gradient of acid deposition in 2000.
2. At low flow, no stream was acidic, alkalinity being ≥29 μeq L⁻¹ and pH ≥6.4. However, NO₃^– was present in streamwater at these flows in concentrations that suggested anthropogenic enrichment, and its concentration correlated with spatial patterns of N deposition from the atmosphere.
3. Severe loss of alkalinity occurred in most streams at high flow during snowmelt (spring) or rainstorms (spring and autumn). Autumn episodes were because of dilution of streamwater alkalinity by rainwater. By contrast, spring episodes involved dilution and NO₃^– titration, the increase in nitrate being correlated with patterns of N deposition. SO₄^2– declined during most episodes.
4. High NO₃^– leaching at low flow suggests that catchment soils in Canton Ticino are approaching saturation in N. These data are among the first to illustrate that NO₃^– can drive episodic acidification in Europe, paralleling locations in north-eastern United States.     

Comparison of epilithic and epixylic biofilm development in a boreal river

SUMMARY. 1. We assessed substratum effects on lotic biofilm development by placing glass and white pine sampling units in a fourth-order boreal river, and analysing, at 6-week intervals, upper-surface biofilms for ATP, chlorophyll, ergosterol, and the activities of nine exoenzymes.
2. All parameters, except chlorophyll standing stock (range 80–320 μg dm⁻²) and β-xylosidase activity (range 0.4–4.8 μmol h⁻¹ dm⁻²), were significantly greater for epixylic biofilms than for epilithic ones, but the magnitude of the increases varied from 2 to 5 fold, showing that, even under similar hydrodynamic conditions, epilithic and epixylic biofilms are structurally and functionally distinct. For example, ergosterol concentrations ranged from undetectable to 0.93 μg dm⁻² for epilithon and from 11–49 μg dm⁻² for epixylon; corresponding ranges for ATP were 1.6–3.7 (epilithon) and 4.2–7.7 μg dm⁻² (epixylon), for acid phosphatase activity: 2.3–4.9 and 20–41 μmolh⁻¹dm⁻², and for alkaline phosphatase activity: 1.9–8.1 and 29–150 μmol h⁻¹dm⁻², respectively.
3. The more extensive epixylic development was attributed to utilization of the wood substratum as a supplemental carbon source and to a higher density of microbial attachment sites.     

Quantitative observations on the pulmonary anatomy of the domestic Muscovy duck (Cairina moschata)

The lungs of five female domestic Muscovy ducks, mean body weight 1.627 kg, total lung volume 48.07 cm³, were analysed by standard morphometric methods. Principal results obtained are: lung volume per unit body weight, 30.17 cm³/g; volume densities of exchange tissue relative to lung volume, 49.24%, blood capillaries relative to exchange tissue, 29.63%, tissue of the blood gas (tissue) barrier relative to exchange tissue, 5.88%; surface area of the blood-gas (tissue) barrier per unit body weight, 30.04 cm²/g; ratios of the surface area of the blood-gas (tissue) barrier per unit volume of the lung and per unit volume of exchange area, 979 cm²/cm³ and 200.06 mm²/mm³, respectively; harmonic and arithmetic mean thicknesses of the tissue barrier, 0.199 μm and 0.303 μm, respectively. The anatomical diffusing capacity of the tissue barrier for oxygen ( DtO₂ ) and the total pulmonary diffusing capacity ( DLO₂ ), 49.58 ml O₂/min/mmHg/kg and 4.55 ml O₂/min/mm Hg/kg, respectively. The lungs of the domestic Muscovy duck appear to be about as well adapted anatomically for gas exchange as the lungs of wild anatid species, and there is no clear evidence that domestication has been associated with any deterioration in the anatomical capacity for oxygen uptake. The weight-specific anatomical diffusing capacity of the lung for oxygen ( DLO₂/W ) was about 3.6 times greater than the weight-specific physiological value, a factor which falls within the expected range.     

The growth and development of the storage root of sugar beet

A study was made of the growth of the storage root of sugar beet as a sugar accumulating organ. The storage root grew by simultaneous cell multiplication and expansion from a series of peripheral secondary meristems laid down during the early stages of development. The weight of water and of non-sugar dry matter per cell increased in proportion to the increase in cell volume. The amount of sugar per cell was proportional to cell volume only during the initial stage of cell expansion up to volumes of about 15 times 10^-8 cm³; thereafter it was less proportional. Thus, average cell size is a major determinant of the sugar concentration of the storage root. The implications of this are discussed.     

Spatio-temporal variation in macroinvertebrate assemblages of glacial streams in the Swiss Alps

1. Changes in water chemistry, benthic organic matter (BOM), and macroinvertebrates were examined in four different glacial streams over an annual cycle. The streams experienced strong seasonal changes in water chemistry that reflected temporal changes in the influence from the source glacier, especially in water turbidity, particulate phosphorus and conductivity.
2. Nitrogen concentrations were high (nitrate-N values were 130–274 μg L^–1), especially during spring snowmelt runoff. Benthic organic matter attained >600 g m^–2 dry mass at certain times, peaks being associated with seasonal blooms of the alga Hydrurus foetidus .
3. Macroinvertebrate taxon richness was two to three times higher (also numbers and biomass) in winter than summer suggesting winter may be a more favourable period for these animals. Benthic densities averaged 1140–3820 ind. m^–2, although peaking as high as 9000 ind. m^–2. Average annual biomass ranged from 102 to 721 mg m^–2, and reached >2000 mg m^–2 at one site in autumn.
4. Taxa common to all sites included the dipterans Diamesa spp. and Rhypholophus sp., the plecopterans Leuctra spp. and Rhabdiopteryx alpina , and the ephemeropterans Baetis alpinus and Rhithrogena spp. Principal components analysis clearly separated winter assemblages from those found in summer.     

Metabolism of a sub-tropical low gradient black water river

SUMMARY. 1. Single-station diel oxygen curves were used to monitor the oxygen metabolism of the Ogeechee River, a sixth-order blackwater river in the Coastal Plain of southeastern U.S.A., over a period of 4 years. Ecosystem production ( P) and respiration (R) were estimated, and P/R ratios calculated to determine the extent of autotrophy characteristic of this type of river. The potential error in oxygen metabolism caused by photo-oxidation of dissolved organic carbon (DOC) in the water was measured and found to be minor.
2. Rates of ecosystem primary production measured were intermediate compared to other rivers, ranging from 0.49 to 13.99g O₂m⁻² day ^−1.Primary production rates were highest during the summer when water levels were low. Regression analysis indicated that water depth and light absorption by DOM were significant predictors of primary production in this river. Incident light intensities were not significantly correlated with production rate.
3. Respiration rates were unusually high, varying between 3.70 and 11.5 g O₂ m⁻² day ^{− 1}. System respiration also varied seasonally, but less than primary production. Rates were slightly higher in spring and summer.
4. With one exception, P/R ratios were considerably lower than l throughout the study period, indicating that the Ogeechee River was highly heterotrophic. PIR ratios ranged from 0.09 to 1.3, and averaged 0.25.
5. A carbon budget calculated for this river showed floodplain inputs were 7 times autochthonous production. Organic carbon turnover length was 690 km, considerably longer than has been reported for lower-order rivers.     

Influence of phosphorus on biofilm formation in model drinking water distribution systems

Aims:  This study investigated the effects of phosphorus on biofilm formation via annular reactor systems in terms of biofilm cell growth, exopolysaccharide (EPS) production, biofilm structure and cell metabolic potential.
Methods and Results:  Drinking water biofilms were developed in annular reactors with supplement of carbon and different levels of phosphorus. The biofilm formation was monitored over a period of 30 days. Biofilm related parameters were examined by various methods, which included heterotrophic plate count, total carbohydrate content, confocal laser scanning microscopy and GN2 microplate assay. Our results showed that phosphorus addition can promote the biofilm cell growth (cell count increased about 1 log with addition of 30 and 300 μg l⁻¹ of phosphorus). However, the addition of 30 and 300 μg l⁻¹ of phosphorus caused 81% and 77% decrease in EPS production, respectively. The results of biofilm structure analysis showed that the addition of 30 and 300 μg l⁻¹ of phosphorus can induce thicker and less homogeneous biofilms with more biomass. Furthermore, the addition of 30 and 300 μg l⁻¹ of phosphorus dramatically increased the biofilm cell metabolic potential. The addition of 3 μg l⁻¹ of phosphorus was found to have minor effects on the parameters examined.
Conclusions:  The results indicate phosphorus addition to drinking water distribution system (DWDS) has a complicated effect on the biofilm formation.
Significance and Impact of the Study:  As the addition of phosphorus at certain levels can affect the biofilm growth in DWDS, care should be taken when phosphate-based corrosion inhibitors are used in the DWDS.     

Input, movement and exchange of organic matter within a subtropical coastal black water river-flood plain system

SUMMARY. 1. Inputs, movements and exchanges of particulate organic matter were measured on two contrasting floodplains of the Ogeechee River, Georgia, U.S.A. A model, which incorporated measurements of standing crop, respiration, litterfall, inundation, and litter processing rates, was used to estimate annual exchanges of organic matter between the river and floodplains.
2. Annual litterfall was higher on the East floodplain than on the lower elevation West floodplain (902 v. 784 g ash-free-dry-mass [AFDM] m⁻²).
3. Experiments with tagged leaves and sticks demonstrated that litter was readily displaced during floods. The distance and direction of displacement varied within and between floodplains but tended to be higher closer to the river and was generally parallel to the river.
4. The model indicated that both floodplains lost organic matter to the river. The lower elevation floodplain (East) lost more organic matter to the river (208 g AFDM m⁻² year⁻¹) than did the higher elevation (West) floodplain (79g AFDM m⁻² year⁻¹).
5. Inputs of organic matter from the floodplain to the river exceeded the amount of litterfall typically entering heavily forested high gradient headwater streams (5.5 v. 0.4-0.6 kg AFDM m⁻² year⁻¹).
6. Floodplain organic matter inputs may exert a greater influence upon structure and function within these streams than do upstream inputs or primary production. Consequently, current conceptualizations of stream structure and function need to be modified to account for the effects of floodplain inputs on stream channel processes within large, low-gradient rivers.     

The distribution of macroinvertebrate communities in two Portuguese rivers

SUMMARY. 1. The distribution of macroinvertebrates in two chemically different rivers of Central Portugal (Soure and Alva) was analysed.
2. In the Soure, a lowland, alkaline river (mean values for alkalinity, conductivity and pH, 101 mg I⁻¹ CaCO₃, 255 μS cm⁻¹ and 7.8, respectively), a relatively high number of individuals and low diversity (mean H '= 2.27) was found. There was considerable temporal variation in the number of individuals present.
3. In the Alva, a highland, acidic river (mean values for alkalinity, conductivity and pH. 4.8 mg 1⁻¹ CaCO₃, 22 μ S cm⁻¹ and 5.7, respectively), diversity was higher (mean H '=3.41). There were large temporal changes in the number of species present, but not in the number of individuals.
4. Similarity indices and cluster analysis identified six site-types and seventeen groups of co-occurring taxa. Some of the taxonomic groups were characteristic of one or more sites, hut others had no strong association with a particular site. Although the rivers differed considerably in terms of physico-chemistry, communities in the upper sections of the two rivers were more similar to each other, than to other communities in the same river. The way the samples of both rivers were clustered seems to indicate that community structure was influenced by factors associated with (1) within river longitudinal variation (e.g. substrate grain size), (2) water chemistry, and (3) seasonal variations (e.g. temperature, flow).     

Mg2+-free buffer elevates transformation efficiency of Vibrio parahaemolyticus by electroporation

Aims:  The ability to transform Vibrio spp. is limited by the extracellular nuclease that their cells secrete. The reported transformation efficiency of this organism is 10²–10⁵ transformants per microgram DNA. We tried different buffers and conditions, aiming to elevate its transformation efficiency.
Methods and Results:  MgCl₂ and sucrose are often included in the washing and/or electroporation buffers to stabilize the cell membrane. However, Mg²⁺ is required for production and activity of the extracellular nuclease. A simple electroporation buffer lacking Mg²⁺ was found to increase transformation efficiency dramatically, to levels 50-fold more than the buffers containing Mg²⁺. To maintain the stability of the cell membranes, Mg²⁺ was replaced with high concentrations of sucrose, from 272 to 408 mmol l⁻¹. With the new buffers, the transformation efficiency of Vibrio parahaemolyticus was increased to 2·2 × 10⁶ transformants per microgram DNA.
Conclusions:  Mg²⁺ in the buffer adversely affected transformation of V. parahaemolyticus by electroporation. The cell membranes of vibrio can be stabilized by high concentration of sucrose when Mg²⁺ is absent.
Significance and Impact of the Study:  A greater transformation efficiency can facilitate the genetic analysis of an organism and its pathogenicity. Buffers lacking Mg²⁺ can be used for other nuclease-producing organisms.     

The use of direct epifluorescent microscopy (DEM) and the direct epifluorescent filter technique (DEFT) to assess microbial populations on food contact surfaces

Two rapid methods, direct epifluorescent microscopy (DEM) and the direct epifluorescent filter technique (DEFT) on swab resuspension fluids, were compared with the traditional total viable count (TVC) on swab resuspension fluids for their ability to enumerate surface populations of attached bacteria. The degree of error in estimating surface populations was shown to be significantly less with DEM than DEFT followed by TVC. DEM estimated populations in the range 3 times 10³ to 5 times 10⁷ colonies/cm² whilst DEFT enumerated populations above 3 times 10⁴ colonies/cm² and TVC above 3 times 10⁵ colonies/cm² (as measured by DEM). Swabbing was shown to remove a constant proportion of organisms from the surface populations tested, although below 3 times 10⁵ colonies/cm² most of the organisms remained in the cotton matrix and were difficult to resuspend. DEFT was more able to enumerate swab resuspension fluids obtained from surface populations below 3 times 10⁵ colonies/cm² than was TVC.     

New Phytologist 141 (1999), 99–108

In the January 1999 issue of New Phytologist , we published the research paper entitled 'The effect of light on the growth and reproduction of Floerkea proserpinacoides ' by Margaret F. McKenna and Gilles Houle ( New Phytol . (1999) 141 , 99–108). Since its publication, the authors have identified two important errors in the text. First, values given for leaf area ratio (LAR) and specific leaf area (SLA) have been given erroneously in units of cm² g⁻¹; the correct units are cm² mg⁻¹. Second, the values for unit leaf rate (ULR) have been given incorrectly as tenfold lower than they should be; these should be multiplied by ten to give the correct values in mg m⁻² d⁻¹.
We apologise to our readers for these mistakes.     

Continuous drift samples of macroinvertebrates in a large river, the Danube in Austria

SUMMARY 1. A new method is described for sampling the drift in large rivers continuously and automatically, using equipment based on the marine, continuous plankton sampler of Hardy (1936).
2. Between April and November 1989, about 790 h were sampled continuously, equivalent to a water volume of 2937m³ and the total catch was 527 drifting macroinvertebrates, in forty-nine taxa. Twenty-five of these taxa are recorded in the drift for the first time and twenty-eight of the drifting taxa were present in benthos samples from the Danube.
3. Total drift density varied between 12 and 31 animals per 100m³ of water sampled throughout the year, with a maximum of 31 animals in May, The composition of major faunal groups showed a significant seasonal pattern, with Oligochaeta and Diptera predominant in spring, Crustacea and Insecta in summer and only Crustacea in autumn. The overall density of the macrozoobenthos from October 1986 to December 1987 was about 19360 animals m⁻² and the proportion of total benthos animals, drifting at any instant in time, ranged from 0.0026 to 0.0064%.
4. The relationship between drift density day⁻¹ and mean daily discharge was described by a power-function. Total mean drift rate of macroinvertebrates in the Danube was estimated to be 13 600 000 animals per 24 h and the mean drift distance was estimated to vary between about 4 and 31 m, dependent on the animal group and the water velocity.
5. No obvious consistent diel pattern could be established from the continuous samples, and no marked diel rhythm could be detected for Oligochaeta, Diptera larvae and Crustacea.     

The effects of variable nitrogen and phosphorous concentrations on Eriophorum vaginatum tillers grown in nutrient solutions

Eriophorum vaginatum tillers were collected at Eagle Creek, Alaska and cultivated in aerated solutions under controlled environmental conditions. The nutrient solutions contained traces, 1.05 and 21 mg l⁻¹ N (nitrate) and traces, 0.15 and 3.10 mg l⁻¹ P (phosphate), pH was maintained at 5.5. The high N, 21 mg l⁻¹, and P, 3.18 mg l⁻¹, nutrient solution produced significant biomass increases. Functional leaf areas were significantly enhanced by high N and P doses in the solutions. Root surface areas varied considerably between treatments; however, significant differences were not found. The mean root surface area of a tiller reached 126 cm² (range 35–290 cm²), whereas the functional leaf area was 6.8 cm² (range 3.3–20.3 cm²). Tillers growing in the highest N + P solutions produced twice the number of daughter tillers as tillers growing in solutions with trace amounts of N and P.     

Denitrification in stream epilithon: Seasonal variation in Gelbæk and Rabis Bæk, Denmark

Abstract Seasonal variations of denitrification activity were determined and compared with various environmental parameters in undisrupted epilithon communities (biofilm) from two Danish lowland streams. In the nutrient-rich Gelbæk, denitrification activity followed extensive changes in biofilm thickness, dry weight and chlorophyll a content during the season. The absolute maximum of denitrification (1.4 mmol N m⁻² d⁻¹, dark incubation) was recorded when the biofilm was best developed in the spring (April and May). Activity decreased dramatically after most of the biofilm suddenly disintegrated and peeled off in early summer. Photosynthetic O₂ production was an important controlling factor of denitrification on a diurnal scale, since the activities were always 2–3 fold lower in the light (50 μE m⁻² s⁻¹) than in the dark. In the more nutrient-poor Rabis Bæk, the biofilm was much less developed and denitrification activities were relatively small (maximum of 0.2 mmol N m⁻² d⁻¹ under dark incubation). The results indicate that productivity of the micro-algae regulates both the seasonal and diurnal patterns of denitrification in the biofilms.     

Impact of biological activity on detritus transported in the lower river Rhine: an exercise in ecosystem analysis

SUMMARY. 1. Published data are used to construct a tentative carbon budget for the ecosystem of the lower river Rhine and its sedimentation areas in The Netherlands.
2. It is estimated that 287 × 10⁶kg Cy⁻¹ of particulate organic material is transported by the river Rhine, and 100 × 10⁶ kgCy⁻¹ of this material is deposited in the delta.
3. Phytoplankton and nitrifying bacteria seem to contribute significantly to the carbon budget, by producing c. 78 × 10⁶kgCy^−l.
4. The mineralization in the water (estimated from routine determinations of biological oxygen demand and from in situ diurnal fluctuations of oxygen) and in the bottom (estimated from the denitrification rates in the delta, from the production rate of methane and from overall oxygen consumption) is shown to degrade c. 50% of the carbon input plus autochthonous production.
5. The carbon budget and oxygen regime in the lower Rhine suggest that after decades of severe organic pollution the river has more or less resumed the normal, slightly heterotrophic state of a large lowland river.     

Integration and decontamination of Bacillus cereus in Pseudomonas fluorescens biofilms

Aims:  The hypothesis that surrogate planktonic pathogens ( Bacillus cereus and polystyrene microspheres) could be integrated in biofilms and protected from decontamination was tested.
Methods and Results:  Pseudomonas fluorescens biofilms were grown on polyvinyl chloride coupons in annular reactors under low nutrient conditions. After biofilm growth, B. cereus spores and polystyrene microspheres (an abiotic control) were introduced separately. Shear stress at the biofilm surface was varied between 0·15 and 1·5 N m⁻². The amount of surrogate pathogens introduced ranged from approximately 10⁵ CFU ml⁻¹ to 10¹⁰ spheres ml⁻¹. The quantity of surrogate pathogens integrated in the biofilm was proportional to the amount introduced. In 14 of the 16 cases, 0·4–3·0% of the spores or spheres introduced were measured in the biofilms. The other two cases had 10% and 21% of the spores detected. Data suggested that the spores germinated in the system. The amount of surrogate pathogens detected in the biofilms was higher in the mid-shear range. Chlorine treatment reduced the quantity of both surrogate pathogens and biofilm organisms. In one experiment, the biofilms and B. cereus recovered when the chlorine treatment was terminated.
Conclusions:  Planktonic surrogate pathogens can be integrated in biofilms and protected from chlorination decontamination.
Significance and Impact of the Study:  This knowledge assists in understanding the impact of biofilms on harbouring potential pathogens in drinking-water systems and protecting the pathogens from decontamination.     

Bacteriological evaluation of groups of beef carcasses before the wash at six Alberta abattoirs

K.W.F. JERICHO, J.A. BRADLEY AND G.C. KOZUB. 1994. A method has been developed for the bacteriological evaluation of groups of beef carcasses which can be used to measure the degree of control over hygiene during hide removal and carcass dressing in abattoirs. This method, which enumerates aerobic mesophilic bacteria automatically using a hydrophobic grid membrane filter, was applied at six abattoirs. Two hundred excision samples (5 × 5 × 0.5 cm) were taken at 10 sites on the external surface of a group of 20 carcasses (five carcasses were sampled on each of four consecutive daily visits) for group-carcass evaluation at each abattoir. For each abattoir, the mean log₁₀ Most Probable Number of Growth Units (MPNGU) and between-carcass variance component were obtained for each site and the average over sites. Using the average within-abattoir variance of this study and previously published studies involving 76 additional carcasses (Jericho et al. 1993), it was determined that 20 carcasses are more than adequate to estimate the mean log₁₀ MPNGU per cm² within 0.5 units at a site. The distribution of the log₁₀ MPNGU per cm² over the 10 sites was compared for the abattoirs, and sites were found to cluster into 2–4 homogenous groups. The means over sites of log₁₀ MPNGU per cm² for the abattoirs ranged from 1.52 to 2.64 and were unrelated to line speed     

A novel terrestrial halophilic environment: The phylloplane of Atriplex halimus, a salt-excreting plant

Abstract This paper describes the microbial ecosystem found on the leaves of Atriplex halimus , a salt-excreting plant in the central Negev highlands of Israel. Because of the regular nightly occurence of dew at this location, these leaves undergo a diurnal wetting so that phylloplane microorganisms experience large fluctuations in salinity and water activity, as well as tolerate repeated desiccation. During the dry season, in the late spring and summer, a significant amount of salts and organic material coats the leaf surface. During dew events the salt concentration at the leaf surface was calculated to be > 0.4 M. Direct counts of the respiring bacteria on the leaf surface ranged from 1.06×10⁴ to 5.06×10⁵ per cm². Using a variety of media it was shown that there was limited bacterial diversity which could be cultured, with greater than 90% of the isolates being orange colored Gram-negative rods. Viable counts ranged from 0.32 to 2.32×10⁴ bacteria per cm² of A. halimus leaf surface. No bacteria capable of nucleating ice were recovered in these studies. The dominant orange pigmented bacterium, identified as a halotolerant Pseudomonas sp., grew optimally at 30°C and at 5% NaCl and was capable of growth in media containing up to 20% NaCl. This bacterium could grow on a variety of organic compounds, including some associated with plant materials. The leaf bacteria were desiccation-tolerant when on the leaf surface or when directly washed off the leaves, but much less so when in isolatd culture. A major component of the tolerance to desiccation is probably related to the compounds on the leaf surface.