Modelling dendritic ecological networks in space: an integrated network perspective

Dendritic ecological networks (DENs) are a unique form of ecological networks that exhibit a dendritic network topology (e.g. stream and cave networks or plant architecture). DENs have a dual spatial representation; as points within the network and as points in geographical space. Consequently, some analytical methods used to quantify relationships in other types of ecological networks, or in 2‐D space, may be inadequate for studying the influence of structure and connectivity on ecological processes within DENs. We propose a conceptual taxonomy of network analysis methods that account for DEN characteristics to varying degrees and provide a synthesis of the different approaches within the context of stream ecology. Within this context, we summarise the key innovations of a new family of spatial statistical models that describe spatial relationships in DENs. Finally, we discuss how different network analyses may be combined to address more complex and novel research questions. While our main focus is streams, the taxonomy of network analyses is also relevant anywhere spatial patterns in both network and 2‐D space can be used to explore the influence of multi‐scale processes on biota and their habitat (e.g. plant morphology and pest infestation, or preferential migration along stream or road corridors).     

Evolution of reproductive effort in viscous populations: the importance of population dynamics

I present two ecological models for the evolution of reproductive effort in viscous populations with empty sites. In contrast with previous studies, I show that limited dispersal needs not have a positive effect on the evolutionarily stable allocation of resources to fecundity versus survival. Rather, depending on the feedback between the trait and the population dynamics, population viscosity may have no effect or even lead to a decrease in the evolutionarily stable reproductive effort when individuals can degrade their environment during their lifetime. I show that the different evolutionary outcomes can be explained by the asymmetry in the level of kin competition resulting from investing into juveniles or into adults.     

基于生态系统服务功能和生态敏感性的生态空间划定研究——以南宁市为例

生态空间管制是我国国土空间管制的重要内容。针对目前国内对生态空间认知有差异,对其划定技术方法还处于探索阶段的情况下,以生态系统服务功能和生态敏感性技术评价方法为手段,以广西壮族自治区南宁市为研究对象,开展了基于生态系统服务功能重要性和生态敏感性的生态空间划定方法的探索研究。结果表明:(1)研究区域内主导的生态系统服务功能主要为生物多样性维护功能和水土保持功能,其次为水源涵养功能。生态系统综合服务功能重要性类型以一般重要为主,约占研究区总面积的42.32%。(2)研究区生态敏感性以水土流失敏感性为主,其次为石漠化敏感类型。生态环境综合敏感类型以敏感为主,约占总面积的85.44%。(3)研究区内初步划定生态空间总面积约9325.27 km~2,占研究区总面积的42.19%,占研究区内生态用地面积的76.59%。土地利用类型以林地为主,约占生态空间面积的83.65%。划定的生态空间范围涵盖了绝大部分生态用地。本研究在一定程度上丰富了生态空间的内涵,可为进一步理解和划定生态空间提供参考与借鉴。     

Key questions in the genetics and genomics of eco-evolutionary dynamics

Increasing acceptance that evolution can be ‘rapid'' (or ‘contemporary'') has generated growing interest in the consequences for ecology. The genetics and genomics of these ‘eco-evolutionary dynamics'' will be—to a large extent—the genetics and genomics of organismal phenotypes. In the hope of stimulating research in this area, I review empirical data from natural populations and draw the following conclusions. (1) Considerable additive genetic variance is present for most traits in most populations. (2) Trait correlations do not consistently oppose selection. (3) Adaptive differences between populations often involve dominance and epistasis. (4) Most adaptation is the result of genes of small-to-modest effect, although (5) some genes certainly have larger effects than the others. (6) Adaptation by independent lineages to similar environments is mostly driven by different alleles/genes. (7) Adaptation to new environments is mostly driven by standing genetic variation, although new mutations can be important in some instances. (8) Adaptation is driven by both structural and regulatory genetic variation, with recent studies emphasizing the latter. (9) The ecological effects of organisms, considered as extended phenotypes, are often heritable. Overall, the study of eco-evolutionary dynamics will benefit from perspectives and approaches that emphasize standing genetic variation in many genes of small-to-modest effect acting across multiple traits and that analyze overall adaptation or ‘fitness''. In addition, increasing attention should be paid to dominance, epistasis and regulatory variation.     

害虫预测预报的生态学基础和应用技术研究进展

概述害虫预测预报领域的最新动态,包括理论基础：非线性动力学、景观生态学、生物地理统计学、异质种群和生态系统链接理论,以及应用技术：地碉诱捕、雷达监测、地理信息系统、全球定位系统、遥感、可视化技术和决策支持系统,对于害虫不则报的基础理论研究和害虫管理的生产应用都具有重要的指导意义。     

森林生态系统中木腐真菌群落形成机理及生态功能

在森林生态系统中,枯死木是一个重要的组成部分,为很多生物提供栖息地,有助于养分循环以及碳和水的储存.木材分解是森林生态系统养分循环、土壤形成和碳收支的决定性过程,越来越受到森林生态学家、病理学家和管理者的重视.在此过程中,木腐真菌通过分泌多种酶降解木材主要成分,实现生态系统中的物质循环,具有极为关键和重要的作用.木腐真...     

Role of saprophagous fly biodiversity in ecological processes and urban ecosystem services

1. Direct consumption of organic matter by the saprophagous larvae provides the ecosystem with a fundamental service by recycling nutrients and reducing exposure to decomposing matter. The present study aimed to assess the functional role of saprophagous flies in the mass loss of different types of decomposing organic matter. 2. Two types of common urban waste were used to measure the role of flies in reducing organic matter: chicken viscera (chicken) and a mixture of flour and uncooked eggs (flour and eggs), representing leftover food. Ten traps baited with each substrate, under field conditions, allowed fly access (exposed to flies) and three traps from each substrate did not (unexposed controls); adult flies entering the traps or emerging from the substrates and substrate mass loss were recorded. 3. Species from Calliphoridae, Sarcophagidae, Muscidae, and Fanniidae families were collected mainly in traps baited with chicken, with Phoridae being the most abundant in traps with flour and eggs as bait. A significantly richer (P < 0.05) assemblage of fly species accessed the traps baited with chicken viscera (21 species) compared with those emerging (11 species), whereas similar numbers of species accessed (n = 5) or emerged (n = 1) from traps baited with flour and eggs (average richness accessing 7.97, emerging 2.83). Chicken substrate mass loss and species richness were positively related (r = 0.56, P = 0.001). In traps where richness was larger than 10 species, the substrates were reduced by more than 85% of their initial weight compared with unexposed controls, which lost 30%. Substrate mass loss significantly increased with the abundance of flies (r = 0.73, P < 0.0001). 4. The results of the present study support the functional role of saprophagous species diversity on the decomposition rates of organic matter, reinforcing the negative consequences of loss or gain of species in modified landscapes and for ecosystem function.     

西北干旱区山地-绿洲-荒漠系统生态恢复综合效益评估

西北干旱区目前已实施众多生态恢复举措试图修复和重建受损的生态系统,截至目前恢复效果如何我们不得而知,但生态恢复效益评估却能够检测其结果,并为未来的生态工程提供参考。在前人研究的基础上,以地面观测的气象资料、土壤调查数据、多源遥感数据和陆面模型模拟数据作为输入,对基于像元二分法的植被覆盖度估算方法、修正的风力土壤侵蚀模型、修正的通用土壤流失方程和基于光能利用率的净初级生产力模型中的参数进行本地化,更为准确的估算了西北干旱区生态恢复效益评价体系中的关键指标,并集成生态恢复效益指标,评估了1990—2015年西北干旱区14个山地-绿洲-荒漠子系统的生态恢复效益。研究发现:(1)山地-绿洲-荒漠子系统的生态系统结构、生态系统质量和生态系统功能时空分异明显:全区山地系统的生态系统结构有所改善,北疆和伊犁地区的山地-绿洲-荒漠子系统生态系统质量上升,荒漠生态系统的生态系统功能下降;(2)1990—2015年西北干旱区的荒漠子系统生态恢复效益在下降,而绿洲和山地的生态恢复效益在上升。基于多指标的生态恢复效益定量评估有助于客观认识西北干旱区的生态恢复现状和动态,评估结果可为未来生态工程提供具体的空间位置,也为我国其他生态脆弱区的生态恢复效益评价提供参考。     

Patchy population structure in a short-distance migrant: evidence from genetic and demographic data

Species often occur in subdivided populations as a consequence of spatial heterogeneity of the habitat. To describe the spatial organization of subpopulations, existing theory proposes three main population models: patchy population, metapopulation and isolated populations. These models differ in their predicted levels of connectivity among subpopulations, and in the risk that a subpopulation will go extinct. However, spatially discrete subpopulations are commonly considered to be organized as metapopulations, even though explicit tests of metapopulation assumptions are rare. Here, we test predictions of the three models on the basis of demographic and genetic data, a combined approach so far surprisingly little used in mobile organisms. From 2002 to 2005, we studied nine subpopulations of the wetland-restricted reed bunting ( Emberiza schoeniclus ) in the southeastern part of the Canton Zurich (Switzerland), from which local declines of this species have been reported. Here, wetlands are as small as 2.7 ha and separated through intensively used agricultural landscapes. Demographic data consisted of dispersal of colour-banded individuals among subpopulations, immigration rates and extinction-/recolonization dynamics. Genetic data were based on the distribution of genetic variability and gene flow among subpopulations derived from the analysis of nine microsatellite loci. Both demographic and genetic data revealed that the patchy population model best described the spatial organization of reed bunting subpopulations. High levels of dispersal among subpopulations, high immigration into the patchy population, and genetic admixture suggested little risk of extinction of both subpopulations and the entire patchy population. This study exemplifies the idea that spatially discrete subpopulations may be organized in ways other than a metapopulation, and hence has implications for the conservation of subpopulations and species.     

中国生态区划研究进展:从格局、功能到服务

在总结国内外生态区域研究的基础上,系统梳理了中国现有的生态区划方案,总结出生态特征和类型区划、生态地理和格局区划、生态功能和服务区划三大类,分别对每个区划的指标、技术、方案、特点进行了归纳,并提出了各自存在的问题。现有研究缺少面向服务供需的生态系统区划,生态制图和更新的标准化技术也存在不足。为此,提出明确不同生态区划的科学或管理目标、强调人类需求对于生态系统服务的影响、重视全球气候变化对生态系统的现实作用和未来影响、加强现代制图技术在生态区划的作用、整合现有多原则和多目标的生态分区方案等五个方面的建议。     

Genetic inference of orchid population dynamics on different-aged lava flows in Costa Rica

Colonization is a fundamental ecological process that is important for the persistence of species, particularly when a changing environment necessitates range shifts. Vacant habitats available for colonization often arise from landscape disturbance. Colonization and population expansion processes can be inferred by examining the levels and spatial distribution of genetic variation of plant populations with known disturbance histories. Samples (N = 690) of the terrestrial orchid, Epidendrum radicans, were collected from five lava flow sites on the slopes of Volcán Arenal in Costa Rica that last experienced major eruptions in 1968 and 1992. Individuals were also sampled (N = 188) from four regional populations. Samples were characterized using 15 nuclear genetic markers and analyzed using population genetics statistics. Genetic diversity within sites was moderate (H_e = 0.092–0.192). Contrary to expectation, diversity tended to be lower on the older lava flows (0.131 vs. 0.172) which may reflect their more sheltered topography that restricted pollen/seed immigration, and/or greater intra- and interspecific competition. Genetic diversity measures indicate that the lava flows were colonized by numerous individuals that likely originated from multiple sources while spatial genetic structure (SGS) statistics indicate that most recruitment in the study sites subsequent to colonization resulted from in situ reproduction and localized seed deposition. Younger sites had significantly greater SGS over larger distances which reflects fewer reproductive events, and less spatial and temporal overlap of seed shadows relative to the older sites. Clones were also generally smaller on the younger sites (≤3 m vs. ≤8 m).     

Effects of population succession on demographic and genetic processes: predictions and tests in the daylily Hemerocallis thunbergii (Liliaceae)

Spatial genetic structure within plant populations is influenced by variation in demographic processes through space and time, including a population's successional status. To determine how demographic structure and fine-scale genetic structure (FSGS) change with stages in a population's successional history, we studied Hemerocallis thunbergii (Liliaceae), a nocturnal flowering and hawkmoth-pollinated herbaceous perennial with rapid population turnover dynamics. We examined nine populations assigned to three successive stages of population succession: expansion, maturation, and senescence. We developed stage-specific expectations for within-population demographic and genetic structure, and then for each population quantified the spatial aggregation of individuals and genotypes using spatial autocorrelation methods (nonaccumulative O-ring and kinship statistics, respectively), and at the landscape level measured inbreeding and genetic structure using Wright's F-statistics. Analyses using the O-ring statistic revealed significant aggregation of individuals at short spatial scales in expanding and senescing populations, in particular, which may reflect restricted seed dispersal around maternal individuals combined with relatively low local population densities at these stages. Significant FSGS was found for three of four expanding, no mature, and only one senescing population, a pattern generally consistent with expectations of successional processes. Although allozyme genetic diversity was high within populations (mean %P = 78.9 and H(E) = 0.281), landscape-level differentiation among sites was also high (F(ST) = 0.166) and all populations exhibited a significant deficit of heterozygotes relative to Hardy-Weinberg expectations (range F = 0.201-0.424, mean F(IS) = 0.321). Within populations, F was not correlated with the degree of FSGS, thus suggesting inbreeding due primarily to selfing as opposed to mating among close relatives in spatially structured populations. Our results demonstrate considerable variation in the spatial distribution of individuals and patterns and magnitude of FSGS in H. thunbergii populations across the landscape. This variation is generally consistent with succession-stage-specific differences in ecological processes operating within these populations.     

From arctic lemmings to adaptive dynamics: Charles Elton's legacy in population ecology

We shall examine the impact of Charles S. Elton's 1924 article on periodic fluctuations in animal populations on the development of modern population ecology. We argue that his impact has been substantial and that during the past 75 years of research on multi-annual periodic fluctuations in numbers of voles, lemmings, hares, lynx and game animals he has contributed much to the contemporary understanding of the causes and consequences of population regulation. Elton was convinced that the cause of the regular fluctuations was climatic variation. To support this conclusion, he examined long-term population data then available. Despite his firm belief in a climatic cause of the self-repeating periodic dynamics which many species display, Elton was insightful and far-sighted enough to outline many of the other hypotheses since put forward as an explanation for the enigmatic long-term dynamics of some animal populations. An interesting, but largely neglected aspect in Elton's paper is that it ends with speculation regarding the evolutionary consequences of periodic population fluctuations. The modern understanding of these issues will also be scrutinised here. In population ecology, Elton's 1924 paper has spawned a whole industry of research on populations displaying multi-annual periodicity. Despite the efforts of numerous research teams and individuals focusing on the origins of multi-annual population cycles, and despite the early availability of different explanatory hypotheses, we are still lacking rigorous tests of some of these hypotheses and, consequently, a consensus of the causes of periodic fluctuations in animal populations. Although Elton would have been happy to see so much effort spent on cyclic populations, we also argue that it is unfortunate if this focus on a special case of population dynamics should distract our attention from more general problems in population and community dynamics.     

流域生态空间与生态保护红线规划方法——以长江流域为例

生态空间是指以提供生态系统服务为主要目标的地域范围,确定生态空间范围是协调保护与发展、保障生态服务持续供给的基础。长江流域是中华民族的摇篮与中国文化发祥地之一,是中国经济发展的重要增长极,以及具有全球意义的生物多样性热点区。以长江流域为对象,探讨面向流域生态空间规划的方法与管理对策。研究中,选择生态系统服务指标(水源涵养、洪水调蓄、水质净化、水土保持和生物多样性维护)和生态敏感性指标(水土流失、石漠化和土地沙化),基于流域水文路径分析和与其关联的生态系统服务的受益人口,提出一种流域尺度的生态空间规划方法。研究结果显示,长江流域生态空间面积为102.25万km^2,占长江流域总面积的57.42%,森林占52.87%,灌丛占19.51%,草地占18.96%,湿地占4.26%,保护了79.47%的水源涵养功能,86.99%的洪水调蓄功能,78.09%的水质净化功能,80.60%的水土保持功能,以及86.49%的自然栖息地。在生态空间规划的基础上,进一步探讨了长江流域生态保护红线的格局,现阶段生态保护红线面积为59.25万km^2,占长江流域总面积的33.27%,其中上游占比59.24%,中游和下游分别占比38.05%和2.71%。本文提出的规划方法与研究结果,不仅可以为长江流域生态空间规划、保障流域生态安全和促进流域经济社会可持续发展提供依据,还可以为其他流域的生态空间的规划提供参考。     

Forecasting species ranges by statistical estimation of ecological niches and spatial population dynamics

Aim The study and prediction of species–environment relationships is currently mainly based on species distribution models. These purely correlative models neglect spatial population dynamics and assume that species distributions are in equilibrium with their environment. This causes biased estimates of species niches and handicaps forecasts of range dynamics under environmental change. Here we aim to develop an approach that statistically estimates process‐based models of range dynamics from data on species distributions and permits a more comprehensive quantification of forecast uncertainties. Innovation We present an approach for the statistical estimation of process‐based dynamic range models (DRMs) that integrate Hutchinson's niche concept with spatial population dynamics. In a hierarchical Bayesian framework the environmental response of demographic rates, local population dynamics and dispersal are estimated conditional upon each other while accounting for various sources of uncertainty. The method thus: (1) jointly infers species niches and spatiotemporal population dynamics from occurrence and abundance data, and (2) provides fully probabilistic forecasts of future range dynamics under environmental change. In a simulation study, we investigate the performance of DRMs for a variety of scenarios that differ in both ecological dynamics and the data used for model estimation. Main conclusions Our results demonstrate the importance of considering dynamic aspects in the collection and analysis of biodiversity data. In combination with informative data, the presented framework has the potential to markedly improve the quantification of ecological niches, the process‐based understanding of range dynamics and the forecasting of species responses to environmental change. It thereby strengthens links between biogeography, population biology and theoretical and applied ecology.     

Insights into the historical construction of species-rich biomes from dated plant phylogenies, neutral ecological theory and phylogenetic community structure

Analytical methods are now available that can date all nodes in a molecular phylogenetic tree with one calibration, and which correct for variable rates of DNA substitution in different lineages. Although these techniques are approximate, they offer a new tool to investigate the historical construction of species-rich biomes. Dated phylogenies of globally distributed plant families often indicate that dispersal, even across oceans, rather than plate tectonics, has generated their wide distributions. By contrast, there are indications that animal lineages have undergone less long distance dispersal. Dating the origin of biome-specific plant groups offers a means of estimating the age of the biomes they characterize. However, rather than a simple emphasis on biome age, we stress the importance of studies that seek to unravel the processes that have led to the accumulation of large numbers of species in some biomes. The synthesis of biological inventory, systematics and evolutionary biology offered by the frameworks of neutral ecological theory and phylogenetic community structure offers a promising route for future work.     

长白山地典型农田生态系统土壤跳虫群落结构及其生态分布特征

为了解长白山地不同地貌类型典型农田生态系统土壤跳虫群落结构及其分布,探讨不同地貌类型对土壤跳虫群落结构和分布及其季节动态的影响,于2015年春季(5月)、夏季(7月)、秋季(9月)分别对长白山地玄武岩台地、花岗岩低山、花岗岩丘陵三种地貌类型玉米田土壤跳虫进行了研究。研究表明,3个生境共获土壤跳虫881头,隶属10科16属22种。其中,玄武岩台地土壤跳虫个体密度是1 760头/m~2,17种;花岗岩低山个体密度是2 206.67头/m~2,13种;花岗岩丘陵个体密度是1 906.67头/m~2,18种。地貌及取样时间的差异对土壤跳虫个体密度、物种数、多样性指数均有一定的影响。花岗岩低山与花岗岩丘陵的个体密度和物种数大小为秋季春季夏季,而玄武岩台地的个体密度和物种数表现出随季节变化呈递增的趋势(P0.05)。不同地貌土壤跳虫多样性均在秋季达到最大,夏季玄武岩台地多样性指数显著高于花岗岩低山和花岗岩丘陵,秋季,玄武岩台地丰富度指数和均匀度指数显著高于花岗岩低山,玄武岩台地优势度指数显著低于花岗岩低山(P0.05)。不同土壤环境因子对跳虫的影响不同,土壤温湿度、有机质、全氮、速效氮和全磷与土壤跳虫的群落结构、生态分布有明显的相关性。综上可知,长白山地农田生态系统土壤跳虫群落结构和生态分布因地貌类型不同而存在差异,季节变化也对其影响明显。     

Metacommunity organisation,spatial extent and dispersal in aquatic systems: patterns,processes and prospects

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